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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063807 ID=TCONS_00063807|Name=TCONS_00063807|organism=Clytia hemisphaerica|type=transcript|length=1987bp acaagaaacagaattcaagattcaagcaGAAAATAGgtGGATTGGAAGTT TGTATACGATGACACCTGGCAATTCTACTACCAAACGTGAATACAGAAAG CTGATTGGCTGGCTATCAGACTCAATCATCAAAGCGAAACTAGATgaaat gaaattctttttggGAGTTCCAGCTggcaaaaatgagaaaattcaaACAC CTTTGGAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGgacaaaat aatttcgatacctTGATTGATATCATGGAAACTATTGGTCGTATTGACCT CGTGCAacgaatcaaaaaatttcaagaaatttcaaaagaaactgAAGctC CCATCACTGTCGAGTTAGCACCGCAAACCTTCACATCTCCTCCAGGAAAT CTATCTTTGAACCTGCAAAGCCTCAGTCCAGGTCATGATGATCAATCAAT CCAAAGCATCAGTCCTGGAGCATCTGAAAGTATCGCCGAGGAAATGATAC GCCCCGAATTATCAGAAAAGGTGTTCACGCCACCGCCATTCCAACAAGCT GAGGAATCCTGTGGATCTCAGAACAGACAGACGTTTGTATTAACGTCGAA TTATGAAAATAAGAGCGGCGGATCAATGAAACAAGACCATCCAAAAGAAA GcaaagatattttaaaaagatataAAATGGATTCGAACCCACGTGGTATA TTCTTGATCATTAGTAACAGTGATTTTTCATTCGCTCTTGAGAAGAATGG TCTCACTATTAACGATAGAGACGGCACCATCAAAGATGTTGAACGTTTAG ATAAGACCTTCACTGGATTACAGTTTGATATTAAAAAGTATCATGATTTA GATGCGGAAAGTATGGAAAAATGTTTAGAATATTTCGCCACTTTAGATCA TACTTATTATGATTGTTTTGCATGTTGTATTATGACTCATGGTACTGAAT CCACACTTGTTGGGACTGATGGTGATGAAATACAACTAACCAATGTTCTC GGAAAATTTGAATCGGTTAAAAGTTTAATAGGTAAACCAAAACTATTCTT CTTTCAAGCGTGTCGTGGAAAACCCGctaaaaaaccttattttacCAAAG ATTCTGCTCCTGGCGGTTATGGTGGAGCAAGTACTTGGGATGACAATATG TTTGGGAAACGTTACACTCCACCATTGGGATCAGATTATTTCATTGGTTA TGCAACACCACCGAACCACGACGCATGGTTAAGTAAAGATGGATCTTGGT ATATCACAGCATTGTGCGAATCTTTAAATAAATACTCAGCCACCGATGAT ATTCACCATATTGCTACATATACAAACGATCTGGTGGCCCAGTATTCCCA TGGTGCTGGCATACCACAAATCCCAAATCCAACATATACTTTAAGAAAAC AGTTGTATTTTTTCCCTGAGAATATTGATACAGTGGTACGAACGGTGGCA CcgaaaaagaaatcgaaagAACCAGCTGAATCATGAAAATATGAATGTCC ATTATTAAGTGGACATTAGGCTGAAGGCTGAagtcaaattttcaacattt cttCAAACAGCACAAAAAGGTGAGACCTTGAATCTGCACCGTACTTTGGA TAACAGATTTAATCTACCTAGCGCGTTTTACACTTTTGGAAGTAATTTAA CTTCTAATCCAGCATTTGTATGCGTTTTTATGTTGCTTATATAATAGATT CGAATCTAGCCATCGACTACACCTTACTGAATTTACAGTATTGGCAGAAG AGGATTGACTTTGGATTTATAAATAAACTCTTAATGTTATtcacgaattt tgaaattcaatgaacaaaaacaaactttttttgatctAAAAAAAGATTTG TGAACTTGATTTAAAAGAATGTTGAATTTAAagcagaatctcaaaaaagt gaatttttgtcaattttttgcatttttttgacttttttgcttaaaatttc gctggaaagactcacttttgaatttttttttgcttga Run BLAST on NCBI protein sequence of TCONS_00063807-protein >TCONS_00063807-protein ID=TCONS_00063807-protein|Name=TCONS_00063807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
QETEFKIQAENRWIGSLYTMTPGNSTTKREYRKLIGWLSDSIIKAKLDEM KFFLGVPAGKNEKIQTPLEFFQYMEGEGQLGQNNFDTLIDIMETIGRIDL VQRIKKFQEISKETEAPITVELAPQTFTSPPGNLSLNLQSLSPGHDDQSI QSISPGASESIAEEMIRPELSEKVFTPPPFQQAEESCGSQNRQTFVLTSN YENKSGGSMKQDHPKESKDILKRYKMDSNPRGIFLIISNSDFSFALEKNG LTINDRDGTIKDVERLDKTFTGLQFDIKKYHDLDAESMEKCLEYFATLDH TYYDCFACCIMTHGTESTLVGTDGDEIQLTNVLGKFESVKSLIGKPKLFF FQACRGKPAKKPYFTKDSAPGGYGGASTWDDNMFGKRYTPPLGSDYFIGY ATPPNHDAWLSKDGSWYITALCESLNKYSATDDIHHIATYTNDLVAQYSH GAGIPQIPNPTYTLRKQLYFFPENIDTVVRTVAPKKKSKEPAES Run BLAST on NCBI transcript from alignment at scaffold_400:158229..167169- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063807 ID=TCONS_00063807|Name=TCONS_00063807|organism=Clytia hemisphaerica|type=transcript|length=8941bp|location=Sequence derived from alignment at scaffold_400:158229..167169- (Clytia hemisphaerica) ACAAGAAACAGAATTCAAGATTCAAGCAGAAAATAGGTAACTTTTGTGCA
GAATTTATTGGATCTCTTTTAACACACATAAATGAAATATTCTTTTCCGT
AGATCAGATCCTTTTAATAAATACAAGCTTTTTTGGTACAATTTATATTG
ATTGATGTTTAAATCATCTTTGCCTACCAGCACCTTATGTACATGCAGTA
TACCATGAACATATAAACGACTGGACATCCATCTCCTTTATCTTTTTGTA
GAAAAGGCTGCTAGCTTCGTTGTCGCCTCGTTAAAAGCACAAAATGAAAC
AATAGATTTTGATGATATACCACTTGGGAATACCTTGCTAACAACGTCAA
AACTTCGACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTTATCTT
TATCATAACAAAGATAACAGAGGCAAAACCATCGTCAGCTTGTCAAAACT
CAGACTAATATTTTTAAATTTTGACTTAAAAGTGTCTAATAAGTTTAGAG
AGTGTCACATTCTAATTTTGATATTCTTATTACACAGGCTCTCAACTTTG
GCAAGCTATTTTTTTCAAGTCATAAAAAAAATTATTGGAGTGACAAAAGA
GATTCAAAAGTATACACGCAGTTGAAATTCTGCATTTCAGAGTTGAAAAT
GTTGATAAAATATATTGCAAACTTGTAAAAAAATTCGAAAATAATTTTTT
TTGTACATTAGGAGTAATGTTCAAGATCTATCAATCTTTTTACCTAAGTA
ATTCAAAGAAATAAAATTATAACGGAATGTTGTCGGATTTTTCATATCAA
TTTTGAAATACAGGCGGCAACGAAGCTCGCTTCAAAGAAACAATAAAAGA
TAGATGTCCAGTCGTTTATATGTTCATGAGTATACCAAATTTGAGGGAAC
TATCTGACTGACATTTGTTTCAAATTAGCATTCCCGTTTCTATTTCTGTT
CTTTCTATCTATTTGTTAAGTAATATAAGATGTAAAACCCATACTGGACA
CGTGTAAAATTTAAGATAAATATTGTTGGTATTATGTACAAGTTTTGTTG
AAATAAGGGAAAAGTGGAGAGATACTTGGAGTAGGTATAGTACGGTCTAA
TTGTGTAAAAATTGTGCACAAAGGCGTGCAAGCATGAAATTTTGCACAAT
TGTAGTTTAGGGGTCAAAAATGGATTTAAATCTCAGACCCAAAAAATTGG
CACATGTTTGTGTATTTTACAGGCCAGAACAGGTTCCATGGCTAAATTGA
ATTTATTTTTCTCCAAAGTATATCATGTTACATACCGTTGGAAAGCATTT
TTCATGCTTGTTTAGAAAAACATTACAACCTATATCTGAAAATGAAGCCA
AAAAAAGTTATTGAGGAAGGCTTTTTAAAAATGAAGAAAAATGATGTAAT
TGCTGACGTCGGCAAAAATTCAAGGACCATACCTGAAAAAGTTTATGTCT
ATCAAATTAAATAGAGGACCTTTCAATGTCTAAATGGATAGCTTTGATTG
AGAGTTAAACTTACTTGACATTGAATATCGCGTTTTTATGACCCTTCGAA
AAAAAATTCATTTTAGCCTGGGAACCTGTTCTGGTCTGTAAAATACACAA
ACAGGTGCCAATTTTTTGGATTGGATTGGATTTAAATCCATTTTTAACCC
CTAAACTACAATTGTGCAAAGTCTCGTGCTTGTACGCCTTTGTGCACAAT
GTTATTGACTTTTGGCACATTTAGACTGCACTAGTAGTGTATCTTAATAA
GTGAAAATAATATGTAGTGGTTTAATTAGACAAAAGACAAGATAATAGTT
AGCAACTACACACCAGGATAGACTAGAGCAAGACTATAAAAAATATTAAT
AACTCATAATTAAGAGTATTGAGCAAACCTCAGAATGATGCAAAGAGATT
TAATTAATAGGAGATGCTAAGCACTGAAAGGATTAATGTTTTCTCACAAA
TATTGTTTATTTTAGGACAAGATGTTATCCAATTAGGGACTAAGGGGTCC
CTCACACATTGATTTTTCCCACTAATAAAGTCTTCTATTGTTTATTAGGT
GGATTGGAAGTTTGTATACGATGACACCTGGCAATTCTACTACCAAACGT
GAATACAGAAAGCTGATTGGCTGGCTATCAGACTCAATCATCAAAGCGAA
ACTAGATGAAATGAAATTCTTTTTGGGAGTTCCAGGTTTGTAAAAATTTA
TTCCAAATTGATCAGATGAGATGGAGTTTTTATAAGATACTTCAATAATT
GGTCATTTGAAGTAATAAAGATGACGCGTTCTTTAGAAAAAGTAACAAAA
TTGTTTTATTAATGGTTAACGACCAACCAAATCAAATAAGAGCTTGTAAA
AACCCCATCTTGTCCCAAATTGATGGACTTATAAATAAAGAGAGAGAAAA
CATGAAAAATTTATTCCCATTCCAAAAAAAATAATTCTCTTGTTTATCCA
GTAAAGTTGGTAATTTTAGGTAAACATTTACTAATTGAACATGAATAAAT
TTTGGTGTATTGAGCCTAATGTTTTTATTGAAAAGAGAAGTGTGGCTGCT
GAAATATTTTTAAATTTTAGCCGGAAGAAATGAGAAAAGATACACACCTT
TAAAAATTTTCCAATACATGAAAATCTAGTTAGCTGGTTTGCAAAGAAAA
CCTAGAAAATCTTTCTGTCATTTCTAGCTGGCAAAAATGAGAAAATTCAA
ACACCTTTGGAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGGACA
AAATAATTTCGATACCTTGATTGATATCATGGAAACTATTGGTCGTATTG
ACCTCGTGCAACGAATCAAAAAATTTCAAGAAATTTCAAAAGAAACTGAA
GGTATTTCTTATATATTACTTCTCTTGTAATGTGTCACTCAGTTAATGCA
GCCATTTAAGATGTACGCCCAATGAAGTATAGGCCCGAAGGGCTAGAAGT
CAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCG
GCCTTGAGCGGCTCGCCTGGTTTTTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAATCGTAAACAAAGGAATTGCTAGATTCAATCTGTCGTCAAAAA
TGCGGCGCATTTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAAGGTTAGA
GATTGAAGTCTAGTCCTTCGGGCTTTAAACTCAATGTGTACGCCATCACT
GTGTACCCATAAACTTGTGACAGTATGAAGGTCTAAGAATATGTTTCGGA
CCTTTTTATGCAGAATTCTTTCAGACGGTATAGATATCATTATTTTAGTG
TACTTTTTTAGAAATTGTTTATTCATATTTATATTTGTTATATTTGTTAT
TCATTCATTCTCATTTTGATATTTTAGCTCCCATCACTGTCGAGTTAGCA
CCGCAAACCTTCACATCTCCTCCAGGAAATCTATCTTTGAACCTGCAAAG
CCTCAGTCCAGGTCATGATGATCAATCAATCCAAAGCATCAGTCCTGGAG
CATCTGAAAGTATCGCCGAGGAAATGATACGCCCCGAATTATCAGAAAAG
GTGTTCACGCCACCGCCATTCCAACAAGCTGAGGAATCCTGTGGATCTCA
GAACAGACAGACGTTTGTATTAACGTCGAATTATGAAAATAAGAGCGGCG
GATCAATGAAACAAGACCATCCAAAAGAAAGCAAAGATATTTTAAAAAGA
TATAAAATGGATTCGAACCCACGTGGTATATTCTTGATCATTAGTAACAG
TGATTTTTCATTCGCTCTTGAGAAGAATGGTCTCACTATTAACGATAGAG
ACGGCACCATCAAAGATGTTGAACGTTTAGATAAGACCTTCACTGGATTA
CAGTTTGATATTAAAAAGTATCATGATTTAGATGCGGAAAGTATGGAAAA
ATGTTTAGAATATTTCGCCACTTTAGATCATACTTATTATGATTGTTTTG
CATGTTGTATTATGACTCATGGTACTGAATCCACACTTGTTGGGACTGAT
GGTGATGAAATACAACTAACCAATGTTCTCGGAAAATTTGAATCGGTTAA
AAGTTTAATAGGTAAACCAAAACTATTCTTCTTTCAAGCGTGTCGTGGAA
AACCCGCTAAAAAACCTTATTTTACCAAAGATTCTGCTCCTGGCGGTTAT
GGTGGAGCAAGTACTTGGGATGACAATATGTTTGGGAAACGTTACACTCC
ACCATTGGGATCAGATTATTTCATTGGTTATGCAACACCACCGAGTAAGT
TAATCACATTTCCTCGCATTTTAAATTTGCTTGCCAAACATTTTTTCTCA
CAGACTAAATTGTGTCTCACAGACTAAATTGTGTTACATAGCCTCGGCTG
TTTTTTGTTTGTATTTTTCTTTGCTTTGTTTTGAAAAATCAGCTTTAGAT
GTTCTAAAGATAGTATTTACTTTCTCTTTTCCAAGTACTTAAAAGGCGCT
GAAAGGATGTTTCTTCCTCAGTAAATTCAAGAATATGTGGTTTGATCGCC
CAATAGTTCCCCTACTAATAGCCAATTTTCAATTGTAAAAATATTCTCCT
GTATAAAACGTGCAGTATTCCGTTCCGCTCCGCTCCGAACCAAAATGAAG
CCAATCATGGTTTCTAACCCCCCCTACATTTAGGGGTGGTCTTGGGTTTT
GATGAACCAAAAGCAAGGGGGTGTTAAAAGTATGACTTTCCTAAGGGGGG
TTGTCAGTTAAGGGGGGGTCTTCTTACCTAAGGGGGGTCTTCTTAGATAA
GGGGGGTCTTCTTAGATAAGGGGGATNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNATGCAAAATGGCAATGCCCAGAACGTG
ACGGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCAAATTTGGGCCAAA
AACTACCTAAAAAAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTAC
TTTTTCCTGATTTTTTGTACAAAGATGGAAAGCAAGATTCTCTAAAGAAT
GGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGAT
TTTCATATTTTGGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTT
TTAACAATGTTGATTCAAAATTTTTTTTGATTTTTTGCACAATGATGCAA
AATGGCAATGCCCAAAATGTGACGAAGCAAGATTTTTAAGGAAAATTATT
TTGTGCAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTGGGCCTGAAT
GGTTCAAGTGATTTTCGTATTTGGGGAAATTCCTTTTTACCATTTTACAT
TATTCAACACACAAGCTTTATATTTCCATTCTGAATTTTTGTACAATTTT
TGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCAT
TCAGCATGTTGCTTGTTTCATTTATACTGATTTTCTAAGGGGGGGGGTGA
AATTTTAAATTAATTTCCTAAGGAGGGGTTAGCACTTAAGGGGGGGGGGG
CCTCTTACCACAGGAAAAAATTTTCGATTTCCAAGGTTGGAAATTCAATA
TTTTTGGGTTGGAAATTCAATATTTTTGGGTTGGAAATTTTTGTTTTATA
ATTGAAGATTGGAAATTTCAGCGATTACCTTAAGCTGATTTGGAAAACGT
AAATTACCCATAGGTTTTGTAGAATAAACCAACGCCCTTAAAAAATCAAG
TGAAAAAAACTCATGTAGAAATGACAATTTTCCAAGGCTAGTTGGAAAAC
ATGACTTTTTGGGTGGGAAATTTGTGTTTCTCCAAACAGTTTGGAAAACG
TTAAAAATCCATGTGGAAATTACGTTTTTGTAACCATTTTCTGCGCATGT
CCTTTGAGAAAACCACAAGTGATTTTTCGCTCAAAACTGGTTTGATGTAT
AGCTACAGCTGTAACCTAGATGTTAGGCTATAATGTGAGCAGTCAAGCTG
TACGTTTCGGTCAGGTGAGGCGTCCCTTCGGAGTGGACTCGGTCAATCGC
AGTGAGTTTGCACAGTGAAGCACATAGGGTACTTGTGTCATAGTTCCAAA
TGGTGCCCTGCTGAGCTGTGTGAGTGATCTAAGATCAACCACATATCTGT
GCGAACAATAACGAGAGATTGACCGGGAGCCATCGAGCCTAGGCTAGCGA
ATGACTGTTCACAAAGACAAAGACCTTGTTTTAAGATCTCTTTTTCCACA
TCTCTGCCATCACTTTTTGGATTTTAGCTTTTTTCAACCTGAATTTTTGA
AAATTCCAACCTTTTTTAGCTTGGATTTTGGCTTTTTTCCAACGGAATTT
TAAAAAAATCCAACCTTGTTTAGCTAGGATTTTGGCTTTTTTCCAACTGA
ATTTTAAAAAATTCCAACCTTGTTAAATTTGGATTTTGGCTTTTTTCAAC
CTGGATTTACGAAAATTCCAACCTTGTTAAATTTGGATTTTGGCTTTTTT
CAACCTGGATTTACGAAAATTCCAACCTTGTTTGGTTTGGATTTTGGCTT
TTTTCAACCTAGATTTTCGAAAATTCCAACCTTGTTTGGTTTGGATTTTG
GCTTATTCCACCTGGATTTTTGAAAATTCCAACCTTGTTCAATTTGGATT
TTGGCTTTTTTCCAACTGAATTTTAAAAAATTCCAACCCCAACCTTATTA
AATTTGGATTTTGGCTTTTTTCAATCTGGATTTTTGAAAATTCCAAGCCA
TGGAAAATGTAAAATTTCCAACCTTGGAGAATGTCCCAGCCACATTTCCA
GGTTGGATTTTCCATTGGATTTTATCTATTTTCCAATAAAGAAAACATGA
AATTTCCAACCTTGGAAATCGAAATTTTTTCCTGTGTTACCTAAGGGGGA
GTCTTGACCCCTCTAGAAACTATGCCATTCTATTGGTTAAATTCAAGTTT
TACGTCACTTCTGACACCAATAGAATGGCTTCGTTTCGTCTAAGTCTTGA
ACTGAATGTTTCTTTTAGACCACGACGCATGGTTAAGTAAAGATGGATCT
TGGTATATCACAGCATTGTGCGAATCTTTAAATAAATACTCAGCCACCGA
TGATATTCACCATATTGCTACATATACAAACGATCTGGTGGCCCAGTATT
CCCATGGTGCTGGCATACCACAAATCCCAAATCCAACATATACTTTAAGA
AAACAGTTGTATTTTTTCCCTGAGAATATTGATACAGTGGTACGAACGGT
GGCACCGAAAAAGAAATCGAAAGAACCAGCTGAATCATGAAAATATGAAT
GTCCATTATTAAGTGGACATTAGGCTGAAGGCTGAAGTCAAATTTTCAAC
ATTTCTTCAAACAGCACAAAAAGGTGAGACCTTGAATCTGCACCGTACTT
TGGATAACAGATTTAATCTACCTAGCGCGTTTTACACTTTTGGAAGTAAT
TTAACTTCTAATCCAGCATTTGTATGCGTTTTTATGTTGCTTATATAATA
GATTCGAATCTAGCCATCGACTACACCTTACTGAATTTACAGTATTGGCA
GAAGAGGATTGACTTTGGATTTATAAATAAACTCTTAATGTTATTCACGA
ATTTTGAAATTCAATGAACAAAAACAAACTTTTTTTGATCTAAAAAAAGA
TTTGTGAACTTGATTTAAAAGAATGTTGAATTTAAAGCAGAATCTCAAAA
AAGTGAATTTTTGTCAATTTTTTGCATTTTTTTGACTTTTTTGCTTAAAA
TTTCGCTGGAAAGACTCACTTTTGAATTTTTTTTTGCTTGA Coding sequence (CDS) from alignment at scaffold_400:158229..167169- >TCONS_00063807 ID=TCONS_00063807|Name=TCONS_00063807|organism=Clytia hemisphaerica|type=CDS|length=7425bp|location=Sequence derived from alignment at scaffold_400:158229..167169- (Clytia hemisphaerica) ACCACGACGCATGGTTAAGTAAAGATGGATCTTGGTATATCACAGCATTG TGCGAATCTTTAAATAAATACTCAGCCACCGATGATATTCACCATATTGC TACATATACAAACGATCTGGTGGCCCAGTATTCCCATGGTGCTGGCATAC CACAAATCCCAAATCCAACATATACTTTAAGAAAACAGTTGTATTTTTTC CCTGAGAATATTGATACAGTGGTACGAACGGTGGCACCGAAAAAGAAATC GAAAGAACCAGCTGAATCATGACTCCCATCACTGTCGAGTTAGCACCGCA AACCTTCACATCTCCTCCAGGAAATCTATCTTTGAACCTGCAAAGCCTCA GTCCAGGTCATGATGATCAATCAATCCAAAGCATCAGTCCTGGAGCATCT GAAAGTATCGCCGAGGAAATGATACGCCCCGAATTATCAGAAAAGGTGTT CACGCCACCGCCATTCCAACAAGCTGAGGAATCCTGTGGATCTCAGAACA GACAGACGTTTGTATTAACGTCGAATTATGAAAATAAGAGCGGCGGATCA ATGAAACAAGACCATCCAAAAGAAAGCAAAGATATTTTAAAAAGATATAA AATGGATTCGAACCCACGTGGTATATTCTTGATCATTAGTAACAGTGATT TTTCATTCGCTCTTGAGAAGAATGGTCTCACTATTAACGATAGAGACGGC ACCATCAAAGATGTTGAACGTTTAGATAAGACCTTCACTGGATTACAGTT TGATATTAAAAAGTATCATGATTTAGATGCGGAAAGTATGGAAAAATGTT TAGAATATTTCGCCACTTTAGATCATACTTATTATGATTGTTTTGCATGT TGTATTATGACTCATGGTACTGAATCCACACTTGTTGGGACTGATGGTGA TGAAATACAACTAACCAATGTTCTCGGAAAATTTGAATCGGTTAAAAGTT TAATAGGTAAACCAAAACTATTCTTCTTTCAAGCGTGTCGTGGAAAACCC GCTAAAAAACCTTATTTTACCAAAGATTCTGCTCCTGGCGGTTATGGTGG AGCAAGTACTTGGGATGACAATATGTTTGGGAAACGTTACACTCCACCAT TGGGATCAGATTATTTCATTGGTTATGCAACACCACCGACTGGCAAAAAT GAGAAAATTCAAACACCTTTGGAATTTTTCCAATACATGGAGGGAGAAGG GCAACTAGGACAAAATAATTTCGATACCTTGATTGATATCATGGAAACTA TTGGTCGTATTGACCTCGTGCAACGAATCAAAAAATTTCAAGAAATTTCA AAAGAAACTGAAGGTGGATTGGAAGTTTGTATACGATGACACCTGGCAAT TCTACTACCAAACGTGAATACAGAAAGCTGATTGGCTGGCTATCAGACTC AATCATCAAAGCGAAACTAGATGAAATGAAATTCTTTTTGGGAGTTCCAG CAAGAAACAGAATTCAAGATTCAAGCAGAAAATAGACCACGACGCATGGT TAAGTAAAGATGGATCTTGGTATATCACAGCATTGTGCGAATCTTTAAAT AAATACTCAGCCACCGATGATATTCACCATATTGCTACATATACAAACGA TCTGGTGGCCCAGTATTCCCATGGTGCTGGCATACCACAAATCCCAAATC CAACATATACTTTAAGAAAACAGTTGTATTTTTTCCCTGAGAATATTGAT ACAGTGGTACGAACGGTGGCACCGAAAAAGAAATCGAAAGAACCAGCTGA ATCATGACTCCCATCACTGTCGAGTTAGCACCGCAAACCTTCACATCTCC TCCAGGAAATCTATCTTTGAACCTGCAAAGCCTCAGTCCAGGTCATGATG ATCAATCAATCCAAAGCATCAGTCCTGGAGCATCTGAAAGTATCGCCGAG GAAATGATACGCCCCGAATTATCAGAAAAGGTGTTCACGCCACCGCCATT CCAACAAGCTGAGGAATCCTGTGGATCTCAGAACAGACAGACGTTTGTAT TAACGTCGAATTATGAAAATAAGAGCGGCGGATCAATGAAACAAGACCAT CCAAAAGAAAGCAAAGATATTTTAAAAAGATATAAAATGGATTCGAACCC ACGTGGTATATTCTTGATCATTAGTAACAGTGATTTTTCATTCGCTCTTG AGAAGAATGGTCTCACTATTAACGATAGAGACGGCACCATCAAAGATGTT GAACGTTTAGATAAGACCTTCACTGGATTACAGTTTGATATTAAAAAGTA TCATGATTTAGATGCGGAAAGTATGGAAAAATGTTTAGAATATTTCGCCA CTTTAGATCATACTTATTATGATTGTTTTGCATGTTGTATTATGACTCAT GGTACTGAATCCACACTTGTTGGGACTGATGGTGATGAAATACAACTAAC CAATGTTCTCGGAAAATTTGAATCGGTTAAAAGTTTAATAGGTAAACCAA AACTATTCTTCTTTCAAGCGTGTCGTGGAAAACCCGCTAAAAAACCTTAT TTTACCAAAGATTCTGCTCCTGGCGGTTATGGTGGAGCAAGTACTTGGGA TGACAATATGTTTGGGAAACGTTACACTCCACCATTGGGATCAGATTATT TCATTGGTTATGCAACACCACCGACTGGCAAAAATGAGAAAATTCAAACA CCTTTGGAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGGACAAAA TAATTTCGATACCTTGATTGATATCATGGAAACTATTGGTCGTATTGACC TCGTGCAACGAATCAAAAAATTTCAAGAAATTTCAAAAGAAACTGAAGGT GGATTGGAAGTTTGTATACGATGACACCTGGCAATTCTACTACCAAACGT GAATACAGAAAGCTGATTGGCTGGCTATCAGACTCAATCATCAAAGCGAA ACTAGATGAAATGAAATTCTTTTTGGGAGTTCCAGCAAGAAACAGAATTC AAGATTCAAGCAGAAAATAGACCACGACGCATGGTTAAGTAAAGATGGAT CTTGGTATATCACAGCATTGTGCGAATCTTTAAATAAATACTCAGCCACC GATGATATTCACCATATTGCTACATATACAAACGATCTGGTGGCCCAGTA TTCCCATGGTGCTGGCATACCACAAATCCCAAATCCAACATATACTTTAA GAAAACAGTTGTATTTTTTCCCTGAGAATATTGATACAGTGGTACGAACG GTGGCACCGAAAAAGAAATCGAAAGAACCAGCTGAATCATGACTCCCATC ACTGTCGAGTTAGCACCGCAAACCTTCACATCTCCTCCAGGAAATCTATC TTTGAACCTGCAAAGCCTCAGTCCAGGTCATGATGATCAATCAATCCAAA GCATCAGTCCTGGAGCATCTGAAAGTATCGCCGAGGAAATGATACGCCCC GAATTATCAGAAAAGGTGTTCACGCCACCGCCATTCCAACAAGCTGAGGA ATCCTGTGGATCTCAGAACAGACAGACGTTTGTATTAACGTCGAATTATG AAAATAAGAGCGGCGGATCAATGAAACAAGACCATCCAAAAGAAAGCAAA GATATTTTAAAAAGATATAAAATGGATTCGAACCCACGTGGTATATTCTT GATCATTAGTAACAGTGATTTTTCATTCGCTCTTGAGAAGAATGGTCTCA CTATTAACGATAGAGACGGCACCATCAAAGATGTTGAACGTTTAGATAAG ACCTTCACTGGATTACAGTTTGATATTAAAAAGTATCATGATTTAGATGC GGAAAGTATGGAAAAATGTTTAGAATATTTCGCCACTTTAGATCATACTT ATTATGATTGTTTTGCATGTTGTATTATGACTCATGGTACTGAATCCACA CTTGTTGGGACTGATGGTGATGAAATACAACTAACCAATGTTCTCGGAAA ATTTGAATCGGTTAAAAGTTTAATAGGTAAACCAAAACTATTCTTCTTTC AAGCGTGTCGTGGAAAACCCGCTAAAAAACCTTATTTTACCAAAGATTCT GCTCCTGGCGGTTATGGTGGAGCAAGTACTTGGGATGACAATATGTTTGG GAAACGTTACACTCCACCATTGGGATCAGATTATTTCATTGGTTATGCAA CACCACCGACTGGCAAAAATGAGAAAATTCAAACACCTTTGGAATTTTTC CAATACATGGAGGGAGAAGGGCAACTAGGACAAAATAATTTCGATACCTT GATTGATATCATGGAAACTATTGGTCGTATTGACCTCGTGCAACGAATCA AAAAATTTCAAGAAATTTCAAAAGAAACTGAAGGTGGATTGGAAGTTTGT ATACGATGACACCTGGCAATTCTACTACCAAACGTGAATACAGAAAGCTG ATTGGCTGGCTATCAGACTCAATCATCAAAGCGAAACTAGATGAAATGAA ATTCTTTTTGGGAGTTCCAGCAAGAAACAGAATTCAAGATTCAAGCAGAA AATAGACCACGACGCATGGTTAAGTAAAGATGGATCTTGGTATATCACAG CATTGTGCGAATCTTTAAATAAATACTCAGCCACCGATGATATTCACCAT ATTGCTACATATACAAACGATCTGGTGGCCCAGTATTCCCATGGTGCTGG CATACCACAAATCCCAAATCCAACATATACTTTAAGAAAACAGTTGTATT TTTTCCCTGAGAATATTGATACAGTGGTACGAACGGTGGCACCGAAAAAG AAATCGAAAGAACCAGCTGAATCATGACTCCCATCACTGTCGAGTTAGCA CCGCAAACCTTCACATCTCCTCCAGGAAATCTATCTTTGAACCTGCAAAG CCTCAGTCCAGGTCATGATGATCAATCAATCCAAAGCATCAGTCCTGGAG CATCTGAAAGTATCGCCGAGGAAATGATACGCCCCGAATTATCAGAAAAG GTGTTCACGCCACCGCCATTCCAACAAGCTGAGGAATCCTGTGGATCTCA GAACAGACAGACGTTTGTATTAACGTCGAATTATGAAAATAAGAGCGGCG GATCAATGAAACAAGACCATCCAAAAGAAAGCAAAGATATTTTAAAAAGA TATAAAATGGATTCGAACCCACGTGGTATATTCTTGATCATTAGTAACAG TGATTTTTCATTCGCTCTTGAGAAGAATGGTCTCACTATTAACGATAGAG ACGGCACCATCAAAGATGTTGAACGTTTAGATAAGACCTTCACTGGATTA CAGTTTGATATTAAAAAGTATCATGATTTAGATGCGGAAAGTATGGAAAA ATGTTTAGAATATTTCGCCACTTTAGATCATACTTATTATGATTGTTTTG CATGTTGTATTATGACTCATGGTACTGAATCCACACTTGTTGGGACTGAT GGTGATGAAATACAACTAACCAATGTTCTCGGAAAATTTGAATCGGTTAA AAGTTTAATAGGTAAACCAAAACTATTCTTCTTTCAAGCGTGTCGTGGAA AACCCGCTAAAAAACCTTATTTTACCAAAGATTCTGCTCCTGGCGGTTAT GGTGGAGCAAGTACTTGGGATGACAATATGTTTGGGAAACGTTACACTCC ACCATTGGGATCAGATTATTTCATTGGTTATGCAACACCACCGACTGGCA AAAATGAGAAAATTCAAACACCTTTGGAATTTTTCCAATACATGGAGGGA GAAGGGCAACTAGGACAAAATAATTTCGATACCTTGATTGATATCATGGA AACTATTGGTCGTATTGACCTCGTGCAACGAATCAAAAAATTTCAAGAAA TTTCAAAAGAAACTGAAGGTGGATTGGAAGTTTGTATACGATGACACCTG GCAATTCTACTACCAAACGTGAATACAGAAAGCTGATTGGCTGGCTATCA GACTCAATCATCAAAGCGAAACTAGATGAAATGAAATTCTTTTTGGGAGT TCCAGCAAGAAACAGAATTCAAGATTCAAGCAGAAAATAGACCACGACGC ATGGTTAAGTAAAGATGGATCTTGGTATATCACAGCATTGTGCGAATCTT TAAATAAATACTCAGCCACCGATGATATTCACCATATTGCTACATATACA AACGATCTGGTGGCCCAGTATTCCCATGGTGCTGGCATACCACAAATCCC AAATCCAACATATACTTTAAGAAAACAGTTGTATTTTTTCCCTGAGAATA TTGATACAGTGGTACGAACGGTGGCACCGAAAAAGAAATCGAAAGAACCA GCTGAATCATGACTCCCATCACTGTCGAGTTAGCACCGCAAACCTTCACA TCTCCTCCAGGAAATCTATCTTTGAACCTGCAAAGCCTCAGTCCAGGTCA TGATGATCAATCAATCCAAAGCATCAGTCCTGGAGCATCTGAAAGTATCG CCGAGGAAATGATACGCCCCGAATTATCAGAAAAGGTGTTCACGCCACCG CCATTCCAACAAGCTGAGGAATCCTGTGGATCTCAGAACAGACAGACGTT TGTATTAACGTCGAATTATGAAAATAAGAGCGGCGGATCAATGAAACAAG ACCATCCAAAAGAAAGCAAAGATATTTTAAAAAGATATAAAATGGATTCG AACCCACGTGGTATATTCTTGATCATTAGTAACAGTGATTTTTCATTCGC TCTTGAGAAGAATGGTCTCACTATTAACGATAGAGACGGCACCATCAAAG ATGTTGAACGTTTAGATAAGACCTTCACTGGATTACAGTTTGATATTAAA AAGTATCATGATTTAGATGCGGAAAGTATGGAAAAATGTTTAGAATATTT CGCCACTTTAGATCATACTTATTATGATTGTTTTGCATGTTGTATTATGA CTCATGGTACTGAATCCACACTTGTTGGGACTGATGGTGATGAAATACAA CTAACCAATGTTCTCGGAAAATTTGAATCGGTTAAAAGTTTAATAGGTAA ACCAAAACTATTCTTCTTTCAAGCGTGTCGTGGAAAACCCGCTAAAAAAC CTTATTTTACCAAAGATTCTGCTCCTGGCGGTTATGGTGGAGCAAGTACT TGGGATGACAATATGTTTGGGAAACGTTACACTCCACCATTGGGATCAGA TTATTTCATTGGTTATGCAACACCACCGACTGGCAAAAATGAGAAAATTC AAACACCTTTGGAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGGA CAAAATAATTTCGATACCTTGATTGATATCATGGAAACTATTGGTCGTAT TGACCTCGTGCAACGAATCAAAAAATTTCAAGAAATTTCAAAAGAAACTG AAGGTGGATTGGAAGTTTGTATACGATGACACCTGGCAATTCTACTACCA AACGTGAATACAGAAAGCTGATTGGCTGGCTATCAGACTCAATCATCAAA GCGAAACTAGATGAAATGAAATTCTTTTTGGGAGTTCCAGCAAGAAACAG AATTCAAGATTCAAGCAGAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00063807-exon-scaffold_400-1575043694:167134..167169 | TCONS_00063807-exon-scaffold_400-1575043694:167134..167169 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1575043694:164985..165121 | TCONS_00063807-exon-scaffold_400-1575043694:164985..165121 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1575043694:164319..164492 | TCONS_00063807-exon-scaffold_400-1575043694:164319..164492 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1575043694:162776..163642 | TCONS_00063807-exon-scaffold_400-1575043694:162776..163642 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1575043694:158229..159001 | TCONS_00063807-exon-scaffold_400-1575043694:158229..159001 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1510915933:167134..167169 | TCONS_00063807-exon-scaffold_400-1510915933:167134..167169 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1510915933:164985..165121 | TCONS_00063807-exon-scaffold_400-1510915933:164985..165121 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1510915933:164319..164492 | TCONS_00063807-exon-scaffold_400-1510915933:164319..164492 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1510915933:162776..163642 | TCONS_00063807-exon-scaffold_400-1510915933:162776..163642 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1510915933:158229..159001 | TCONS_00063807-exon-scaffold_400-1510915933:158229..159001 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1491911889:167134..167169 | TCONS_00063807-exon-scaffold_400-1491911889:167134..167169 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1491911889:164985..165121 | TCONS_00063807-exon-scaffold_400-1491911889:164985..165121 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1491911889:164319..164492 | TCONS_00063807-exon-scaffold_400-1491911889:164319..164492 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1491911889:162776..163642 | TCONS_00063807-exon-scaffold_400-1491911889:162776..163642 | Clytia hemisphaerica | exon |
TCONS_00063807-exon-scaffold_400-1491911889:158229..159001 | TCONS_00063807-exon-scaffold_400-1491911889:158229..159001 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_400 | supercontig | scaffold_400:158229..167169 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0008234 | cysteine-type peptidase activity |
GO:0005515 | protein binding |
GO:0004197 | cysteine-type endopeptidase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0042981 | regulation of apoptotic process |
GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006508 |
proteolysis |
biological_process |
GO:0042981 |
regulation of apoptotic process |
molecular_function |
GO:0004197 |
cysteine-type endopeptidase activity |
molecular_function |
GO:0008234 |
cysteine-type peptidase activity |
molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00063807 vs. Swiss-Prot (Human)
Match: CASP8 (Caspase-8 OS=Homo sapiens GN=CASP8 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 5.361e-42 Identity = 140/466 (30.04%), Postives = 215/466 (46.14%), Query Frame = 2
Query: 167 VPAGKNEKIQTPLEFFQYMEGEGQLGQNNFDTLIDIMETIGRIDLVQRI--KKFQEISKETEAP----------ITVELAPQTFTSPPGNLSLNLQ---SLSPGHDDQSIQSISPGASESIA---------------------------EEMIRPELSEKVFTPPPFQQAEESCGSQNRQTFVLTSNYENKSGGSMKQDHPKESKDILKRYKMDSNPRGIFLIISNSDFSFALEK--NGLTINDRDGTIKDVERLDKTFTGLQFDIKKYHDLDAESMEKCLEYFATLDHTYYDCFACCIMTHGTESTLVGTDGDEIQLTNVLGKFESVK--SLIGKPKLFFFQACRGKPAKK--PYFTKDSAPGGYGGASTWDDNMFGKRYTPPLGSDYFIGYATPPNHDAWLS-KDGSWYITALCESLNKYSAT-DDIHHIATYTNDLVAQYSHGAGI-PQIPNPTYTLRKQLYF 1411
+P K E I+ L FQ ++ + L ++N L +++ I R+DL+ + +E+ +E + P + +++ + S + LQ S DD ++ I + + EE + S +P F EE CG V+T S +QD ES+ + K Y+M S PRG LII+N +F+ A EK +I DR+GT D L TF L F+IK + D E + + L+ + +DH+ DCF CCI++HG + + GTDG E + + +F +K SL GKPK+FF QAC+G +K P T DS Y D + RY P +D+ +G AT N ++ + +G+WYI +LC+SL + DDI I T N V+ + Q+P PT+TLRK+L F
Sbjct: 30 IPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERSSSLEGSPDEFSNGEELCG-------VMTI-----SDSPREQD--SESQTLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIPVET-DSEEQPY---LEMDLSSPQTRYIPD-EADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMPQPTFTLRKKLVF 476
The following BLAST results are available for this feature:
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