TCONS_00063757 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063757
Unique NameTCONS_00063757
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2089

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063757 ID=TCONS_00063757|Name=TCONS_00063757|organism=Clytia hemisphaerica|type=transcript|length=2089bp
TATAGATGGAGTTAAGAGAAGGTTGTGTATGTTATGAGAGAGTTACGCCA
AAAAGTTTTAACAAAATGAAACACACTGTATGATCATAGCAAGTAACATA
TAACACAAAACaatatttgaaatcattttcttATCGTTTCACCTGAGAAG
TATTCAAAGATACATATTATTGAAAAAGTGGAACGAAAATAATGGCAGAG
CGAGCGCCGTTTGACGGAGAGCAGCGGGACGAGAAGGAAGAGAAAGCCAG
GCTTGAACAAAATGCTTTACGAACCAATAACCATATTCTAACTCAAGACT
TTTCAGATGAATATGGAAATAAATATTGGGCTAAATTCAAAACAGAACAC
TTCGATTCCGGTGTATCCCGGTTTGCGTTTAAGGGGACATTACGAGGTTC
TGGACCTAAAAAAGATCAACAATGTGTTGTTAAAGTGTTTAAAGATGAGT
TTGCAAAGGATATTGATTTATGGGTACCAGACCTTTACACCAGCATACGT
GCTAAAGAGTTATGCAAAGAATTTAACGATGAACATGTATCGACATTGAG
ATTAGCCGAAGCTCCAGTCAAGATGGAATTTGTTTTACCAATGTTAGCCA
GAGTTGATGAAACCACTATGAATAACTCTGCTACAGCTCtcagaaagaat
aaaaaaatagcTAAACAAGAGTTTGTAGCTATTGAACAATTTATTGAAGG
GGAATATGTGAAATTCAATTCAAATGCAGGGTATGAGCAACAAGAGTTAT
CAGAGTTGATGCCAGCTTTTACACATTGGACCTGGGAAAGGACAGCTCGC
AAGATGATGGTCTGTGATTTACAAgGTGTGAAGAGAAAAGAAGGAAATGT
CACTCATTACATCCTAACCGACCCAGCTATCCACTCAGTGGAGGAGACGT
TCGGCCTAACCGATTGTGGTGCAACAGGCATGTACAAAGTGTTGACTGCT
CACAGATGCAATGATATTTGCAAACAGTTACAACTAGAAGATACATCAGT
GTTACGTTTAATGTTATTGGTAGAATTGCTGAAGAACACTGGCACAACTT
ATAATTTCCAACTcacagaaaatgaaaagaaaatgaacGAACTTGAGAAA
CGAAAGTAATGTACCTGTTAATATTGGAttgaactgttttttttttgttg
ttggtaCTTTATCATAAAAGACATTTTCACAGTTTTGGATAGTAAAAAGA
ATCCAAATTTCCTGTTCTTGATGTTCATGacgtaccttaaaggaagaaat
tttggcgggaatttaatttggcggatggccaaaaaagttttttagaggga
atttaatttggcggatggacgaaaaaactaaatttggcgggaatttaatt
tggcgtttggtgaaaaatttatccttaaaatggcgtaaaaacagcaaaaa
aaatgcaaaaccaccttaaaagagattacattttcaaaaagtttaatttg
gcgggaatttaatttggcggatggcggaaaaaagaaattttggcgggaac
ttaatttggcggattctggccaaatccgccaaatccgccaaattttcttt
ccgccaaaatttcttcctttaaggtaattttTGCGAACAGAAAACCAACC
TGGCATTTGCCAAcattgatttaaattttttgattaaCTTCTcaaaagaa
ccagtaaattatTAGTAAGGCAAGGCTGAATATATTTTAGCACTTTGAGT
CTATAATTGTACtttattatgttcttatactgGGGTAAAACCCAGGTACT
TTAGCGGTTTTTACTGATTTGAACCCTGCTTGAAACTCAGTCATTCTAGG
CGCAgtactgttcttaaattggttttatttttaggcgcttttgagcctca
ttttctattttttttaaagagtgtAGTACAATTATTGACAAATACCCAAA
CCTTTTTTGACAACCCAGATGGTCATGTTTAAAAGATAATGTTATGCATG
AGTATCGAACAGAGCATGTATACTTTCTCATAAACATTGATATCCCGTAC
TCACTCAATCattagacaaaCCTACGGTATTCCATGCATTTACGTAGAAG
CGTAGAAGGTATCACATTTAGAGAAATGTTAAAAAAGCA
Run BLAST on NCBI

protein sequence of TCONS_00063757-protein

>TCONS_00063757-protein ID=TCONS_00063757-protein|Name=TCONS_00063757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MAERAPFDGEQRDEKEEKARLEQNALRTNNHILTQDFSDEYGNKYWAKFK
TEHFDSGVSRFAFKGTLRGSGPKKDQQCVVKVFKDEFAKDIDLWVPDLYT
SIRAKELCKEFNDEHVSTLRLAEAPVKMEFVLPMLARVDETTMNNSATAL
RKNKKIAKQEFVAIEQFIEGEYVKFNSNAGYEQQELSELMPAFTHWTWER
TARKMMVCDLQGVKRKEGNVTHYILTDPAIHSVEETFGLTDCGATGMYKV
LTAHRCNDICKQLQLEDTSVLRLMLLVELLKNTGTTYNFQLTENEKKMNE
LEKRK
Run BLAST on NCBI

transcript from alignment at scaffold_40:16274..29140-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063757 ID=TCONS_00063757|Name=TCONS_00063757|organism=Clytia hemisphaerica|type=transcript|length=12867bp|location=Sequence derived from alignment at scaffold_40:16274..29140- (Clytia hemisphaerica)
TATAGATGGAGTTAAGAGAAGGTTGTGTATGTTATGAGAGGTACTTTCAC
TTTAATGTTTTAATCATTTATTAACTCTTATTTTGCTCTTTATAACTGTA
ATTTTTCGGCCTTAAATTAGTAATATATTTCACTGATGGAATATCTCGCT
ACTAATAACTCAGTTGTATTCATCTTATAGGCATGCCATTCGTTTTTACA
AGCATAACATGGCTCTCTATAATTTCATAATGACTTGTTTCGTTTCAGAG
TTACGCCAAAAAGTTTTAACAAAATGAAACACACTGTATGATCATAGCAA
GTAACATATAACACAAAACAATATTTGAAATCATTTTCTTATCGTTTCAC
CTGAGAAGTATTCAAAGATACATATTATTGAAAAAGTGGAACGAAAATAA
TGGCAGAGCGAGCGCCGTTTGACGGAGAGCAGCGGGACGAGAAGGAAGAG
AAAGCCAGGCTTGAACAAAATGCTTTACGAACCAATAACCATATTCTAAC
TCAAGACTTTTCAGATGAATATGGAAATAAATATTGGGCTAAATTCAAAA
CAGAACACTTCGATTCCGGTGTATCCCGGTTTGCGTTTAAGGGGACATTA
CGAGGTTCTGGACCTAAAAAAGATCAACAATGTGTTGTTAAAGTGTTTAA
AGATGAGTTTGCAAAGGATATTGATTTATGGGTACCAGACCTTTACACCA
GCATACGTGCTAAAGAGTTATGCAAAGAATTTAACGATGAACATGTATCG
ACATTGAGATTAGCCGAAGCTCCAGTCAAGATGGAATTTGTTTTACCAAT
GTTAGCCAGAGTTGATGAAACCACTATGAATAACTCTGCTACAGCTCTCA
GAAAGAATAAAAAAATAGCTAAACAAGAGTTTGTAGCTATTGAACAATTT
ATTGAAGGGGAATATGTGAAATTCAATTCAAATGCAGGGTATGAGCAACA
AGAGTTATCAGAGTTGATGCCAGCTTTTACACATTGGACCTGGGAAAGGA
CAGCTCGCAAGATGATGGTCTGTGATTTACAAGGTATGCTCATCTTTTTT
TTGATATGTTTAAATCCGTAATGTTTTTTTTTATAAGCACAACGCTTTAA
GCATACGAAGGCTCAGATTTGCAGAATTCCTACATAAGCATACACGTTTT
TTTCAGCCTCAGCATGTTTCTTAGTTCTTAGGTATTCTGAACCTCATGTT
TCTTAAAAGTTTGTTTCTTAAAAAAAATGTGTATATGTCCGGCTGGAATA
TTTTTCAAGTTGTCATTTTTTATCTGCTTAAAAAGGTTTGGTGGAGGGCA
AGTAAAAAAAGACATTCCACGGCTAGCTACATTTCACTGCTCTCAAAATC
TGTCCCAAAGTCTGAAAAAGTCTCGGGTGAATCATAAGAATGATTAATAA
GCATAAACATAAGCTATGCCTGAATGCTTTATGAACTTAAGCATACACGA
GCCTGACCAAGATGCATACACTTGCTTATAAAGAAAACATGTAGTCTTTT
AAAGGTTCTGTTTTTAACATAAGTGTTCCCGTTTCATATCAGACACACAC
TTGATGTCGGGACAGTGTCTGCCTATTGTTATATTATGCTGGTATAAGCA
AAAAATGTTTTTCTTTTCCTCTTTCTGACCAATCTTTCTCCACCTATGTG
TCAATCCAATGTGAAAAATGTGAACTTAAATTGATGAGTAAGCAAACTCA
CTCTTATCCAAAAACAAAACCTTTAACTCATCAATGTTTAGAAAAAGGGG
TTACGCGCGCTCCAGAACGCTTAAGTACGTTCCTCCACTCTGTTTGCGTT
GCAAATACTACTGAGGTAATCCAGGATAATCATGACGATCGGCGAAAAAT
TTAGGGCTATTGAAATTACGTTATTTCATTGGTTGAAACTCACTAGCATG
TTACATTTTGGTCGTTTTCGTGATTATGCCGATTTGCTAGTTAACCTCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTTTGCAACAGCCTCA
GGATCTATAAAGTCCAAAATATCTGAAAAACACATTGGCCAAAGGGAATG
TAAAAAGAAATTCCAAAATACCAAAATTCTAAAAATTTGAAAAAATCCCG
AAAATAAATTTAAAAGAAATCCCTTTTACCAACCTCGTTCCCTCATGCGT
ATTATCAGCTTTTTTATGCTTTACTAACTGATAGCGCCCTTTTACTTTTT
TTAAACAGGCAAAATATAATTTATTCTTTAATATATACTGTAGGATATAC
TGTTAAATTTCACAATGGTTTTGGAAAAATTTTAAAAATATTTGATATTT
TATAGCTTTGTTTTGCAGTGAGGGGTGTTGCAGATTTTTCAGAGATGTAT
TTGAAAGTTTCTAGATTGATAATTGAAAATGCAGATGGTGTACAGTATTA
TTTCGATAGAGAAGAAACCACCCTTCATCATTGGATTAATCAGATTGAAA
GCACTTCGATATGCATGGAAAAGAAAAGCAGAGGAAAGGAGTTCCATCAT
GATTGAAACGTATGCGTTGGTTGTAATAATGGTTAAAAAAGACAACATTT
TTGAAACAGTAAAACAATGTGAATAATTTCTTGATTATNAGGAGTTCCAT
GATTGAAACGTATGCGTTGGTTGTAATAATGGTTAAAAAAGACAACATTT
TTGAAACAGTAAAACAATGTGAATAATTTCTTGATTATCGTCAGACGTAC
CTTTGTCGCAAACGAGAGACTTGGGAGAGAACTTTTATAAATATCGCTCG
TCATATGGTTTTTAAATACATACAAGACATTACATTCAGTTACATTTCCC
TTATTATGTTATCAGAAATCTCGTATCATATTGGCAAACATTCAAGAATC
TCGAATGTTTTGTATGCAGTGAAGTGATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCATACACGAACCTTGAATTTTGAA
AGTGGTTGAGCGATATATAGGAACTTAGTCGACCGCGCGCACATTATACC
AAAGGAGACGCGCTGCGCGCGTAAAAAGACCTGAATGCACTTTTCATGGT
GTCAGCCCCCCCCCCAGAAATCTGAAGGGCACCTAGGCCAGGTTAGTAGA
GGGGGGCTAATGCCTTGCAATTCTTTGGGGTTACCTATTCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGTTACCTATTCATTAAGGGTAC
CTAGCTGTCTTGATGGAGGCTCTGGGGGCTGGTTATATTTTCCAAATCGA
ATATTTCAAAATATTTCAAATTATTGAGCACCTAGTTTCCCATCCAATTT
TTCTTTCGTTTCCCATCACACCATCTTTTGCTATATTTTTCTAATGATGT
GATTGTTTTTATTTATAGCCGCCATCTTTATAGCATAAAAACAAAGCTTT
TCTCATGCGAGTGCGCTTCTCGTGCTACCGTGAGATCGGGTAACTTGCAT
CAGTGGAGGCTAACGTGCATAGACCTTAAATAAATGACCTGGCTGGTCAT
TTAAATACAAAGTTAAATCAAAACAAAAATGGTAGAGTAGAGCTGCGAGC
GGAGCTGCGTAGTTGTATTTTAATGACCAGCCAGGTCATCCAGGGCTATG
CATGTTAGCCTCCACTGATGCAAGTTACCCGATCTCACGGCAGCATAGAG
AAGCTAAAACCTCAGGATAAGAGTATGCAAACATGGATAGCTAGTTATGT
TTTTGGCTCTGTTTAACCGTTTAACACTCACACTCATAACTGATTAAAAT
CTTCTGGTATACAAAAGAACAAAAAGTGTCAATTCAAAAAAATTTCTTTT
GGCTGAATGGGGGTACCTAACTCAAAGCAATTTCTCAAGGGGACCTAAAT
TGCTGGGGGCACCATGCTCAATGGGGGCACCTAAAAAGTGGGCTGAAACC
ATGCTTTTGAACCGAGTCCCAAAGTTCGCTTTTTTCATGATTGTATCACT
GCCATCAGTAATATCAAAAAGTCGCGGAAGTGGCTTTAGGTACGAGATAG
ATACTATTTAGCTTACTTATTTAGTATTGTCTAAATAATATGAACTTGTC
TCATCTACAGTATGATGCGTATGCCGTATGCGGTTTATAAATAAACCTAA
GGTATTCCTCTTCTAAAGCCTAAGGTTAGTGTTCCAGTCTTTAAAACATC
CTTCGGATGCTCTTATTTTCGTCTTTTTTGAGTATTTTTAACCACTTTCC
GAAGAATTAAAATTAAAATGTTCTTAACTTGTTCTCGATATTTTAGCCAT
CGAAGCCTTATGCTCTTATATAGTTTGTTCTTATAAAAAGACGTGTATTC
GCATTTACAAATAGACGCATGTCTTTGTATACTATTTATATATGTATAGT
TTATTTGATTAGAGCATTTCAGGTCTCTTGCTGAGGTACTATAGGAGAAT
AGCGCACCGCGCTGAATCTAAAAATAGCTTTTATTTTTGACATAATCATT
ACTCTCGATGTGTTTGTACGAGTTCCAATCCCATCAACCTTTGCGTTAAN
GAATCTAAAAATAGATTTTATTTTTGACATAATCATTACTCTCGATGTGT
TTGTACGAGTTCCAATCCCATCAACCTTTGCGTTAATCTCTTTTACACGT
TAATTGCATCATTTGACAAAGGACATATAACAACTTGCACGTATCTTTAA
TTGAGCCGCATTGAATTGTGGGATTGCAACTCGTACAAATGTCAAAAAAG
TGAAAAGTAATAATTATGACGGGAGTTTCTAAACATCGACCAGCGACCAC
GACCGGAATCAAGTCCTTAGAATACTAAAAAGTGACCTTTGAAGTAACCA
GTCATTTTCTTGACAAAGTGACACTATTTGATAAAAATATTGACAGGGTC
ATTAAGTATGATGTTTGTAAGCTTTGTTACACCAAATATTTTAATTATGC
TGAATGAGATGCCTTTAGTATGAATAGAAGTCAGTAGGAAAAAGTTGGAA
AGGCCAGTTTATTCTATTGTCTTTATGGTGACAAAATGACTAATTTCGAC
AGAAATAACAGTCTGATGAAGAAATGCAAAGCTTCTCGAACCATTTTCAA
AAAATTTTGTGCCATTAATTATTTTGATGCTGATAATACAAAAGGATAGA
AATTGACACCATAATTGAGCTCCAAGAGCGTCGAAATGGTTGTTGCCCCG
CAGGGGCTTTTGTTGCTTCACGTAGCGGACCTGCTCGCCAGAAAAATATT
CATATTCATGTTTCGTCCGATTCTGAGTGGGCCGCGCGCGGTTAAAAAAT
GTTAGCGCGCGATATCTCTTTTGCTGCTACTTGTATTGATTTCCTTATCT
GATATTCCGATGGCGGATTGGCGGCCGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAATATTTCGGCTGGACCCGCCAATCCCCGAAAACGA
GGGCTGGGTTACCAGACCTCCCGCTGCAAAATTCTTGACGCGGTCTCGCA
AAATTCTGTAATGTAAACCTTCAAGATGTTGAAAATTTTCCCGATCTTCA
GAGCTTTAGCGTGTCGGATGAAAATTTCACCATCTGGGTGCCAGATAATT
GATTTCCTAGCTATGCACGGACAGAGAAGGTAGCTTCCCGTCTGCACTGC
CAGTCCACACAGCTAAAAGCTTTCACAAACAACAAACAGCGCACAAGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTTTTGGATTGACACTTTCGTTATGTATGGATCTTACTG
AGAAAATTTTAACCGCATCGGCTCGTGCTTCTTAACTTTAAACAGCTCTA
GTAAAATTGAGCACTTTTTATGAAGACTCATTTCACCAATTTATAGTCTG
ATTATGATTCCCTTGCTCGCTTCATGACTAAGTTCCTCTGGGCTAATATC
TGCTATCGGCGGGGCATTTATAGCGACAGCTACTTGCTAGTTTTACGTAT
TTGGCTCGTGGCTTTAAATATATGAAATAGGGGTGAGCTTAATCTTCATA
TGATACATATTCAAATGATTAGGAGAGACACTTTACGTTGGAGAAAGAGA
AAATACTCGATAACCCAAATTTATCTGGTCGACGTTTAGAAACTCCCAAT
TATGACGTATGTGTTGCGGAGCGCTATTCAAAAAATCACAAAGGTTTTAT
TCAAACATTTTATTCTTTAAAACTTTTAAAATTCTTTAGGCAAACCTGCC
ACGAGTTTTGAATGACAAGGGCTCTTTTTGAACCTTGACTAATTGACCGG
TCATTTATTTGGCGTGATTAAGAAAATAAGTAGTTAATCCCGGAAATTTA
TTCTGAAAAATAAACAGATATAATTTTGTTTGAGGTCTAAATTGGCTTTA
AAGTTTTTGTTTTTAAATAACAGTGATATCATTTGCTTACTCATCAATTT
TAATTCACAAGCTTTTTCACATTGGATTGACACGAATGTGGAGCAAGATT
GGTCAGGAGGAGGAAAAGAAGAACATTATTTTGCTTATATCAGCATAATA
TAACAATAGATAGACACTGTCCTGATATGAAATATGTGTCTGATATGAAA
CGGGAACACTCAACGGTCAAACTTTTGGCTCAATTTTATAAAGGATTTTG
GACATGTTTTTTTAGACTACCCGGTATATTAAACGGGAACACTTATGTAA
AAATAAAATCTTTAACCAACATAATGTACAAACATTTTTTATACTGTTCA
GTTGTGTACACGGAATATATGCCTCGTTTAGAACACGAATTCCTGCTGGA
AGACCAAGGGGTTCTAATGTGCAGAGCACGATATAACAATTTTCTCAACT
TATATTGAGCTAGTGTCTGAGAATGTCTGTCCGTCGGAATCTTTTCAGGC
CTAGGCACGAGTTTCTCAATGAAATTGGAATTTCAAATCGTCGGTGAAAA
TACTATAGTTGAGACCAGTGCTGCGCGCACGTTTGACTATCTCCTATATA
CATCTTCCTTCCGAATCTCAATTCTTTATGATATACCCAACTAAGCAAAC
TATTTGATCAATCTTAGGTGTGAAGAGAAAAGAAGGAAATGTCACTCATT
ACATCCTAACCGACCCAGCTATCCACTCAGTGGAGGAGACGTTCGGCCTA
ACCGATTGTGGTGCAACAGGCATGTACAAAGTGTTGACTGCTCACAGATG
CAATGATATTTGCAAACAGTTACAACTAGAAGATACATCAGTGTGAGTTT
TAGCTATTGACAAACCCAAAGGGCCAGAAGGGGAAGAAAGGTCCTATTCC
GAAGAGTATACAATTTCCCCCAGAAAGCCTCTTCTACACTTTACAGATCA
TCTAACTAATGACGCAATGTTTCGAGCTCCAACCCTTACCCTAACTGATA
AGATCAAAATAATCAAAAATCGAAAATATCGNGCAATGTTTCGAGCTCCA
ACCCTGACCCTAACTGATAAGATCGAAATAATCAAAAATCGAAAATATCG
AAAAGGTCAAAAAGGAAGAATAAAAAAAGTCCGCTAGTGACAACCACTCC
TACCGATTCATTCCTAATTGTTTATCACGGGAATTAACTACATGTGGTCT
AAAAGAACGACAAATTACGCATGTGTGTTAATGCAGAAGTCTGATTTTTT
AACTCTTCGGAATGGGACCTTTTTCTGACTGCTAGACTCGAGACTCCTGG
ATGGGAAATGACGCCACTTATTTGCCAACTAGAACGTCCGCGCGTGGTTT
TTGCACAAACGCCGGATTGAAAGTAAAATCTATCGCTAGATTTCAAAAAA
TAGAGTCATCAAAAACAAAAGAACCGCTAGATACAATCCGTCGTCATGAT
TGCGGCGCGTTCTAGGCGCGTTCTGGATGGGAAGTAAGTGGCTTCACTTT
TTCTTGCCTGGGAAAGGTTAAAGATTCTATTCTAGCCCTTCGGGCTTTAA
ATTCAATGGTTTTAGCCTCTGCTTAAATCTTTGTTTACATTAACTCTTAT
AAGCGCTCCCTCAGTTTTAAAGGTCATGTGCAAGTCATTTTACTAATTAT
TCATGTAGTCAATACAGCTTTCATTTGTAATACGGTACGGCACACTTCAG
TTGTTTATGTTTTTCGTAATAAATAATTGCCCAAATGCATATACTTTACG
TCAACTGGACAGAATTTAAAGTTAGGTTGATTTCTAGGTCAAACTTAGGC
TGAAAAGCTCATCGATTTATAAACCCGAAGGGATAGATGTCGTGCTTTGG
CTGAAGTATGTGCAGAGGTTAGGTAGGAAATCCTACACGTGACATTACAA
TAGAATTTCAGCGCTTGACCAATAAGAAGCTTTGCGCGGCTTTTTCGAAA
ACAAAAACAGTAATATTTTATATATTTTATATTCACTTTTTTATTCTTGC
TTGGAAGAACTTAAAGCATGACATCTAGCCCTTCGGACTTTACAGAATTC
TGTGGAAAAGCTGAAAACGAAAATTCAAGATTGCAGCTTTTCATTATAAA
ATCTTTTTGAATTTTTCCTGTCATCGAACTGAATCGACCTATGTTAATGT
TAATATTAATGTATATATTCTTTAAAGTCGAAAAAAGTGTACAAATCTGT
ACTAAATAGAGTTCGACTAATCATGGTAATAATATTAACCTTTAGACCAC
GAGGGACGCGTATTTACGTCCAACACAAGCGAAAATACTGAGTCTCAGAC
TTAAGGCCATAGCTACTGACCACTTGATTTAAAGGGGCATAAACCGAATG
CTTTATTAAAAATAGCTTTCCAATGGTACCAATTCCATCTTCTAAATCAA
AAACTACAATTCTTTATGGCACTTTAAAGTTTTGGGGGAAAAGTAGAAAA
TTTGAGAAAGTTTTGGAATTTCAGTCCCATTCAGAGTCACTTTTTTCGCA
AATTTCGAGTCCCACGTAGGGTTCATTTTTCGAACTTCAGCCCCGTCGGT
CGACAAGGGTAGTACTCCCCCCCCACCCGGGGCAAAGGGTTAATTGATTC
CATCTTCATCATCTTTTCAGGTTACGTTTAATGTTATTGGTAGAATTGCT
GAAGAACACTGGCACAACTTATAATTTCCAACTCACAGAAAATGAAAAGA
AAATGAACGAACTTGAGAAACGAAAGTAATGTACCTGTTAATATTGGATT
GAACTGTTTTTTTTTTGTTGTTGGTACTTTATCATAAAAGACATTTTCAC
AGTTTTGGATAGTAAAAAGAATCCAAATTTCCTGTTCTTGATGTTCATGA
CGTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGGCC
AAAAAAGTTTTTTAGAGGGAATTTAATTTGGCGGATGGACGAAAAAACTA
AATTTGGCGGGAATTTAATTTGGCGTTTGGTGAAAAATTTATCCTTAAAA
TGGCGTAAAAACAGCAAAAAAAATGCAAAACCACCTTAAAAGAGATTACA
TTTTCAAAAAGTTTAATTTGGCGGGAATTTAATTTGGCGGATGGCGGAAA
AAAGAAATTTTGGCGGGAACTTAATTTGGCGGATTCTGGCCAAATCCGCC
AAATCCGCCAAATTTTCTTTCCGCCAAAATTTCTTCCTTTAAGGTAATTT
TTGCGAACAGAAAACCAACCTGGCATTTGCCAACATTGATTTAAATTTTT
TGATTAACTTCTCAAAAGAACCAGTAAATTATTAGTAAGGCAAGGCTGAA
TATATTTTAGCACTTTGAGTCTATAATTGTACTTTATTATGTTCTTATAC
TGGGGTAAAACCCAGGTACTTTAGCGGTTTTTACTGATTTGAACCCTGCT
TGAAACTCAGTCATTCTAGGCGCAGTACTGTTCTTAAATTGGTTTTATTT
TTAGGCGCTTTTGAGCCTCATTTTCTATTTTTTTTAAAGAGTGTAGTACA
ATTATTGACAAATACCCAAACCTTTTTTGACAACCCAGATGGTCATGTTT
AAAAGATAATGTTATGCATGAGTATCGAACAGAGCATGTATACTTTCTCA
TAAACATTGATATCCCGTACTCACTCAATCATTTACCGTAACTTGGTCTA
ATGTCGACATCCCTCTTCTAATGTCGACATCCTTCTTTAGAGATAGGAAT
AATAGGAAGCGGTCGGAATCATTGATGGACTCCTCAACTGATTGCTTAGC
AAAAAAATAAGTTTCAATCAGCGATTCCGACCATCCTATCATTCATATCT
TTAAAGAAGGGTGACGAAATTAAAAGAGGGATGTCGACATTAGACAAACC
TACGGTATTCCATGCATTTACGTAGAAGCGTAGAAGGTATCACATTTAGA
GAAATGTTAAAAAAGCA

Coding sequence (CDS) from alignment at scaffold_40:16274..29140-

>TCONS_00063757 ID=TCONS_00063757|Name=TCONS_00063757|organism=Clytia hemisphaerica|type=CDS|length=2754bp|location=Sequence derived from alignment at scaffold_40:16274..29140- (Clytia hemisphaerica)
GTTACGTTTAATGTTATTGGTAGAATTGCTGAAGAACACTGGCACAACTT
ATAATTTCCAACTCACAGAAAATGAAAAGAAAATGAACGAACTTGAGAAA
CGAAAGTAAGTGTGAAGAGAAAAGAAGGAAATGTCACTCATTACATCCTA
ACCGACCCAGCTATCCACTCAGTGGAGGAGACGTTCGGCCTAACCGATTG
TGGTGCAACAGGCATGTACAAAGTGTTGACTGCTCACAGATGCAATGATA
TTTGCAAACAGTTACAACTAGAAGATACATCAGTATGGCAGAGCGAGCGC
CGTTTGACGGAGAGCAGCGGGACGAGAAGGAAGAGAAAGCCAGGCTTGAA
CAAAATGCTTTACGAACCAATAACCATATTCTAACTCAAGACTTTTCAGA
TGAATATGGAAATAAATATTGGGCTAAATTCAAAACAGAACACTTCGATT
CCGGTGTATCCCGGTTTGCGTTTAAGGGGACATTACGAGGTTCTGGACCT
AAAAAAGATCAACAATGTGTTGTTAAAGTGTTTAAAGATGAGTTTGCAAA
GGATATTGATTTATGGGTACCAGACCTTTACACCAGCATACGTGCTAAAG
AGTTATGCAAAGAATTTAACGATGAACATGTATCGACATTGAGATTAGCC
GAAGCTCCAGTCAAGATGGAATTTGTTTTACCAATGTTAGCCAGAGTTGA
TGAAACCACTATGAATAACTCTGCTACAGCTCTCAGAAAGAATAAAAAAA
TAGCTAAACAAGAGTTTGTAGCTATTGAACAATTTATTGAAGGGGAATAT
GTGAAATTCAATTCAAATGCAGGGTATGAGCAACAAGAGTTATCAGAGTT
GATGCCAGCTTTTACACATTGGACCTGGGAAAGGACAGCTCGCAAGATGA
TGGTCTGTGATTTACAAGGTTACGTTTAATGTTATTGGTAGAATTGCTGA
AGAACACTGGCACAACTTATAATTTCCAACTCACAGAAAATGAAAAGAAA
ATGAACGAACTTGAGAAACGAAAGTAAGTGTGAAGAGAAAAGAAGGAAAT
GTCACTCATTACATCCTAACCGACCCAGCTATCCACTCAGTGGAGGAGAC
GTTCGGCCTAACCGATTGTGGTGCAACAGGCATGTACAAAGTGTTGACTG
CTCACAGATGCAATGATATTTGCAAACAGTTACAACTAGAAGATACATCA
GTATGGCAGAGCGAGCGCCGTTTGACGGAGAGCAGCGGGACGAGAAGGAA
GAGAAAGCCAGGCTTGAACAAAATGCTTTACGAACCAATAACCATATTCT
AACTCAAGACTTTTCAGATGAATATGGAAATAAATATTGGGCTAAATTCA
AAACAGAACACTTCGATTCCGGTGTATCCCGGTTTGCGTTTAAGGGGACA
TTACGAGGTTCTGGACCTAAAAAAGATCAACAATGTGTTGTTAAAGTGTT
TAAAGATGAGTTTGCAAAGGATATTGATTTATGGGTACCAGACCTTTACA
CCAGCATACGTGCTAAAGAGTTATGCAAAGAATTTAACGATGAACATGTA
TCGACATTGAGATTAGCCGAAGCTCCAGTCAAGATGGAATTTGTTTTACC
AATGTTAGCCAGAGTTGATGAAACCACTATGAATAACTCTGCTACAGCTC
TCAGAAAGAATAAAAAAATAGCTAAACAAGAGTTTGTAGCTATTGAACAA
TTTATTGAAGGGGAATATGTGAAATTCAATTCAAATGCAGGGTATGAGCA
ACAAGAGTTATCAGAGTTGATGCCAGCTTTTACACATTGGACCTGGGAAA
GGACAGCTCGCAAGATGATGGTCTGTGATTTACAAGGTTACGTTTAATGT
TATTGGTAGAATTGCTGAAGAACACTGGCACAACTTATAATTTCCAACTC
ACAGAAAATGAAAAGAAAATGAACGAACTTGAGAAACGAAAGTAAGTGTG
AAGAGAAAAGAAGGAAATGTCACTCATTACATCCTAACCGACCCAGCTAT
CCACTCAGTGGAGGAGACGTTCGGCCTAACCGATTGTGGTGCAACAGGCA
TGTACAAAGTGTTGACTGCTCACAGATGCAATGATATTTGCAAACAGTTA
CAACTAGAAGATACATCAGTATGGCAGAGCGAGCGCCGTTTGACGGAGAG
CAGCGGGACGAGAAGGAAGAGAAAGCCAGGCTTGAACAAAATGCTTTACG
AACCAATAACCATATTCTAACTCAAGACTTTTCAGATGAATATGGAAATA
AATATTGGGCTAAATTCAAAACAGAACACTTCGATTCCGGTGTATCCCGG
TTTGCGTTTAAGGGGACATTACGAGGTTCTGGACCTAAAAAAGATCAACA
ATGTGTTGTTAAAGTGTTTAAAGATGAGTTTGCAAAGGATATTGATTTAT
GGGTACCAGACCTTTACACCAGCATACGTGCTAAAGAGTTATGCAAAGAA
TTTAACGATGAACATGTATCGACATTGAGATTAGCCGAAGCTCCAGTCAA
GATGGAATTTGTTTTACCAATGTTAGCCAGAGTTGATGAAACCACTATGA
ATAACTCTGCTACAGCTCTCAGAAAGAATAAAAAAATAGCTAAACAAGAG
TTTGTAGCTATTGAACAATTTATTGAAGGGGAATATGTGAAATTCAATTC
AAATGCAGGGTATGAGCAACAAGAGTTATCAGAGTTGATGCCAGCTTTTA
CACATTGGACCTGGGAAAGGACAGCTCGCAAGATGATGGTCTGTGATTTA
CAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039975XLOC_039975Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063757-proteinTCONS_00063757-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063757-exon-scaffold_40-1575043694:29101..29140TCONS_00063757-exon-scaffold_40-1575043694:29101..29140Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1575043694:28108..28892TCONS_00063757-exon-scaffold_40-1575043694:28108..28892Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1575043694:19349..19523TCONS_00063757-exon-scaffold_40-1575043694:19349..19523Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1575043694:16561..17570TCONS_00063757-exon-scaffold_40-1575043694:16561..17570Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1575043694:16274..16352TCONS_00063757-exon-scaffold_40-1575043694:16274..16352Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1510915933:29101..29140TCONS_00063757-exon-scaffold_40-1510915933:29101..29140Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1510915933:28108..28892TCONS_00063757-exon-scaffold_40-1510915933:28108..28892Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1510915933:19349..19523TCONS_00063757-exon-scaffold_40-1510915933:19349..19523Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1510915933:16561..17570TCONS_00063757-exon-scaffold_40-1510915933:16561..17570Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1510915933:16274..16352TCONS_00063757-exon-scaffold_40-1510915933:16274..16352Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1491911889:29101..29140TCONS_00063757-exon-scaffold_40-1491911889:29101..29140Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1491911889:28108..28892TCONS_00063757-exon-scaffold_40-1491911889:28108..28892Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1491911889:19349..19523TCONS_00063757-exon-scaffold_40-1491911889:19349..19523Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1491911889:16561..17570TCONS_00063757-exon-scaffold_40-1491911889:16561..17570Clytia hemisphaericaexon
TCONS_00063757-exon-scaffold_40-1491911889:16274..16352TCONS_00063757-exon-scaffold_40-1491911889:16274..16352Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_40supercontigscaffold_40:16274..29140 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.22428	10.6341	5.6115	5.42446	5.59456	3.88073	11.5636	14.1796	8.34652	14.0064	10.984	5.94628	16.3008	15.6622	19.9226	20.2129	10.7871	13.0789	18.0041	23.9957	12.4191	12.0397	14.5139	13.7552	19.0057	21.3963	24.2925	22.5544	15.2903	13.2606
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004166MHCK_EF2_kinase
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004674protein serine/threonine kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063757 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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