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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063747 ID=TCONS_00063747|Name=TCONS_00063747|organism=Clytia hemisphaerica|type=transcript|length=1115bp
ccccccaagATGCTCGTTGTGTTATAACAATACATAATTGTTAACAAAGA
ATACTAAATAAACAAATGCATGGAAAGGACTTATTGACATAAATTAGAAA
gaatatactttaatgggataaactttcgcggggattaaatttcgcggttg
ggcctatccgcgaaattcaaaaatttcgccgggacttaatttcgcgggtg
gcactattgggtgacaatattttcacgattttgtgacttttactgtcaaa
tcatgcatgttggttgttgaaatacaNNNNNNCACTATTGggtgacaata
ttttcacgattttgtgacttttactgtcaaatcatgcatgttggttgttg
aaatacacattatttgcgcctctttgatgcaagtaataATTTAAATAGTA
TTTATTCGACatgttttgagttttgtttagaaatatttcgcggatgaggc
ccttccaaatttccattgggacttaatttcgcagattttcgcggatgaca
cccaaaaacgcgaaatcggcgaaatttaatccccgcgaaagtttatccca
ttaaaataGTATTAACATCATTTGAAACCATATGTTTCAGTTCAGTTGAC
gaatatctatttttaattgtcatacaaaataaaaattctttagTGAATAA
AATAGTATATGATATTATTGAACAAAACTGTACAAAATTCGTTGGATCCC
ATATCGATGTATTTAATGCTTAGACTAAAAAGTTCTGGATACCTTAAACC
ATCTTTCTTGGTaaaaatttcaggtttaaaGCTTGTCGTCATCAGCTTTT
CATTAAAGGCTGAACGAAAGTAAATTTTCATAAAGGAAAGTTAAATAATC
ATCACTTTCAACAATTTTATGACGATGCACCCTCGTTAGCAACAAGTACG
CCCCCACTTGTGGGTGCTTTTTGCTGGGATGGCGTTTCTGCTTCTTTTTC
TCCTCTGACACGAATGTTATGTTCTTCACGAAATTTGTTCAATTCTTGAC
CTTTCTCTGTCAGTTGTGATTTTAATTTCTCCACAACGGCGCCAATCtgg
gtgaaaaaaaaacaagaaaggtTTTTTGACTCAATGATAAAGAAGGCGTT
GCTAGCTTAATATCG Run BLAST on NCBI transcript from alignment at scaffold_4:47692..48806 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063747 ID=TCONS_00063747|Name=TCONS_00063747|organism=Clytia hemisphaerica|type=transcript|length=1115bp|location=Sequence derived from alignment at scaffold_4:47692..48806 (Clytia hemisphaerica)
CGATATTAAGCTAGCAACGCCTTCTTTATCATTGAGTCAAAAAacctttc
ttgtttttttttcacccaGATTGGCGCCGTTGTGGAGAAATTAAAATCAC
AACTGACAGAGAAAGGTCAAGAATTGAACAAATTTCGTGAAGAACATAAC
ATTCGTGTCAGAGGAGAAAAAGAAGCAGAAACGCCATCCCAGCAAAAAGC
ACCCACAAGTGGGGGCGTACTTGTTGCTAACGAGGGTGCATCGTCATAAA
ATTGTTGAAAGTGATGATTATTTAACTTTCCTTTATGAAAATTTACTTTC
GTTCAGCCTTTAATGAAAAGCTGATGACGACAAGCtttaaacctgaaatt
tttACCAAGAAAGATGGTTTAAGGTATCCAGAACTTTTTAGTCTAAGCAT
TAAATACATCGATATGGGATCCAACGAATTTTGTACAGTTTTGTTCAATA
ATATCATATACTATTTTATTCActaaagaatttttattttgtatgacaat
taaaaatagatattcGTCAACTGAACTGAAACATATGGTTTCAAATGATG
TTAATACtattttaatgggataaactttcgcggggattaaatttcgccga
tttcgcgtttttgggtgtcatccgcgaaaatctgcgaaattaagtcccaa
tggaaatttggaagggcctcatccgcgaaatatttctaaacaaaactcaa
aacatGTCGAATAAATACTATTTAAATtattacttgcatcaaagaggcgc
aaataatgtgtatttcaacaaccaacatgcatgatttgacagtaaaagtc
acaaaatcgtgaaaatattgtcaccCAATAGTGNNNNNNtgtatttcaac
aaccaacatgcatgatttgacagtaaaagtcacaaaatcgtgaaaatatt
gtcacccaatagtgccacccgcgaaattaagtcccggcgaaatttttgaa
tttcgcggataggcccaaccgcgaaatttaatccccgcgaaagtttatcc
cattaaagtatattcTTTCTAATTTATGTCAATAAGTCCTTTCCATGCAT
TTGTTTATTTAGTATTCTTTGTTAACAATTATGTATTGTTATAACACAAC
GAGCATcttgggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063747-exon-scaffold_4-1491911889:47692..48806 | TCONS_00063747-exon-scaffold_4-1491911889:47692..48806 | Clytia hemisphaerica | exon |
| TCONS_00063747-exon-scaffold_4-1510915933:47692..48806 | TCONS_00063747-exon-scaffold_4-1510915933:47692..48806 | Clytia hemisphaerica | exon |
| TCONS_00063747-exon-scaffold_4-1575043694:47692..48806 | TCONS_00063747-exon-scaffold_4-1575043694:47692..48806 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:47692..48806 . |
Blast
The following BLAST results are available for this feature:
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