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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063564 ID=TCONS_00063564|Name=TCONS_00063564|organism=Clytia hemisphaerica|type=transcript|length=890bp GCCTTATCTTGGCCCAAAgtttatcaacattttcttatATATAGGTGCac taaaattaataaaagaacGACCCTGTTTGTTTAAAGATAGCTAGATAGAT AGataaggagtaggaatcacagccaGTGTGTAAAATATCCAATAGCAGGA CTGTGGAAGTGTCCGAGCCAGTGTGTAAATATCTGAGAGCAGGACTGTGG AAAGCATCCAAGTCAGTGTGTAAAATTAATAATAGCACAACTGTGGATAG TGTACGAGCCAATGTGTAAAATAACTGATAGCACGACTGGTGATAGCGTT CCGAATCTGTACAGTATAGTGTTAAAATTGCATTTGCCAGAAATTGATTA AACATTTCaacaatctttttaatttaacatGAGCTTTTTGTTTTATTCAA GTTGAGTACAGTATTTTACGTACAGTATCATATATTCTGTTTTGattcca ttaaaaaattccacaaagACGGGGTACACACACCACACTTTCAAATCACA CAAATTGAAAGCAgataattatgacgtcatcctTTCTTTCTGGTGCAAGA AAGTAATCCCCTGGTTTTAATACATTAGTAAAAACAAGTATTTTTGTCTC TATTAATCAGGGGGTTCagatcaatattttgatttgaaacatGGCGTCAT TTTGCTGcgctattcccaggagaataatttgctgTCAGCCGAATAAGGGT TATACAATTGtttttttcagcttgagtttatgtctaatgttatgggtTTT TGAAGTTCTAAGAGGTGAGAGGAGATAATTATTTTCAGTACAGTACACAG CACTATTTTTGATTCCATGATCTTAGCTTGTCTTAGATGTCCTGTGCGTG CATTGTCCGGTGTTGAAAATTATTTGATCTTAACATCAGC Run BLAST on NCBI transcript from alignment at scaffold_393:5..894 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063564 ID=TCONS_00063564|Name=TCONS_00063564|organism=Clytia hemisphaerica|type=transcript|length=890bp|location=Sequence derived from alignment at scaffold_393:5..894 (Clytia hemisphaerica) GCTGATGTTAAGATCAAATAATTTTCAACACCGGACAATGCACGCACAGG
ACATCTAAGACAAGCTAAGATCATGGAATCAAAAATAGTGCTGTGTACTG
TACTGAAAATAATTATCTCCTCTCACCTCTTAGAACTTCAAAAacccata
acattagacataaactcaagctgaaaaaaaCAATTGTATAACCCTTATTC
GGCTGAcagcaaattattctcctgggaatagcgCAGCAAAATGACGCCat
gtttcaaatcaaaatattgatctGAACCCCCTGATTAATAGAGACAAAAA
TACTTGTTTTTACTAATGTATTAAAACCAGGGGATTACTTTCTTGCACCA
GAAAGAAaggatgacgtcataattatcTGCTTTCAATTTGTGTGATTTGA
AAGTGTGGTGTGTGTACCCCGTctttgtggaattttttaatggaatCAAA
ACAGAATATATGATACTGTACGTAAAATACTGTACTCAACTTGAATAAAA
CAAAAAGCTCatgttaaattaaaaagattgttGAAATGTTTAATCAATTT
CTGGCAAATGCAATTTTAACACTATACTGTACAGATTCGGAACGCTATCA
CCAGTCGTGCTATCAGTTATTTTACACATTGGCTCGTACACTATCCACAG
TTGTGCTATTATTAATTTTACACACTGACTTGGATGCTTTCCACAGTCCT
GCTCTCAGATATTTACACACTGGCTCGGACACTTCCACAGTCCTGCTATT
GGATATTTTACACACtggctgtgattcctactccttatCTATCTATCTAG
CTATCTTTAAACAAACAGGGTCgttcttttattaattttagtGCACCTAT
ATataagaaaatgttgataaacTTTGGGCCAAGATAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00063564-exon-scaffold_393-1491911889:5..894 | TCONS_00063564-exon-scaffold_393-1491911889:5..894 | Clytia hemisphaerica | exon |
TCONS_00063564-exon-scaffold_393-1510915933:5..894 | TCONS_00063564-exon-scaffold_393-1510915933:5..894 | Clytia hemisphaerica | exon |
TCONS_00063564-exon-scaffold_393-1575043694:5..894 | TCONS_00063564-exon-scaffold_393-1575043694:5..894 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_393 | supercontig | scaffold_393:5..894 . |
Blast
The following BLAST results are available for this feature:
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