TCONS_00063511 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063511
Unique NameTCONS_00063511
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1096

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063511 ID=TCONS_00063511|Name=TCONS_00063511|organism=Clytia hemisphaerica|type=transcript|length=1096bp
CCTGGTTTGGCCatcatagcctaatttgcaatagtttttaCGACGAATTC
CGATTTGTTCCATTTTAACAAACGGTTTAAACCGGGcgaaatatcggaaa
aaatatcgaaaaacaaaaaaatccaaaaaatctaGATCAGAAAACAAAAA
GGAAAGCAAGAAAAGGAAACTAAAGACCAagaaatctatttcaaaagaGC
AGTGAAAGTGAAAGATGTCATGCATATGCAATAATAATTCAACCAACGAG
ATCCCTTGTATCAATAACAAGTGTGTGCTGTCATCATCCACTGATCAACG
TTGCTTCACATCCCTAGAGAAAGCTCACAAAGGATGTGTTGACAAGAGGC
GCTGTTACAGTCACAAAAATCCTTTTAAAAGACCTTTATTAGAGTGTTGT
GATGTGCAAACTAATGGTAATCTATGCAATGAAAATCAACAATTGCGATA
CCTCTTGATCGATGCGAACGGCCCTGTGATGAAAATGACACCTGGCAACA
CAGACCAATCTCCGACGTCACAAATTCCTATTCAAGAAGCCGCTCCTTTC
AGATTGAGCAACGTTCAGATTGCAGCTGTCATCTCCGTTCCTTTTTCTTT
GCTCTTCATTGGGCTGTCTCTGCTCGTGCTCATCCGTGGCAAACGCAACA
AAAGGAAAGCCAAGAAAGTTGAAGAAGAATACAACAGACGAGAAGAAGTT
CTTTTGGGTTTGGAATCGTTGAACTTGCAGGAAATCACAACTTCAGGGAG
TGGTGCTGGTCTACCTTTGTTGATCCAGAGAACCATCGCCCGGCAGATCA
TCCTTCACGAAGTCATCGGTACAGGACGTTTCGGCTACGTCCATCGAGGA
ACGTGGCACGACCAGAACGTGGCTGTCAAACTGTTTCTCACCAACGAAGA
AAACTCATGGTTCCGAGAAGCGCAAGTGTACCAAACTACTATGCTCAGGC
ATGAAAATATTCTAGGTTTCATTGCAGCAGACAACAAAGACACAGGTGCT
TGTACTGAGCTTTGGTTGGTGACAGAATACCACNGATCGGTAAGAACCTG
GACCTTCTCTCTAGAAAGTGTTGCTTTTATATTTGTGAATTTCTTA
Run BLAST on NCBI

protein sequence of TCONS_00063511-protein

>TCONS_00063511-protein ID=TCONS_00063511-protein|Name=TCONS_00063511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MSCICNNNSTNEIPCINNKCVLSSSTDQRCFTSLEKAHKGCVDKRRCYSH
KNPFKRPLLECCDVQTNGNLCNENQQLRYLLIDANGPVMKMTPGNTDQSP
TSQIPIQEAAPFRLSNVQIAAVISVPFSLLFIGLSLLVLIRGKRNKRKAK
KVEEEYNRREEVLLGLESLNLQEITTSGSGAGLPLLIQRTIARQIILHEV
IGTGRFGYVHRGTWHDQNVAVKLFLTNEENSWFREAQVYQTTMLRHENIL
GFIAADNKDTGACTELWLVTEYHXSVRTWTFSLESVAFIFVNFL
Run BLAST on NCBI

transcript from alignment at scaffold_391:112218..136215+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063511 ID=TCONS_00063511|Name=TCONS_00063511|organism=Clytia hemisphaerica|type=transcript|length=23998bp|location=Sequence derived from alignment at scaffold_391:112218..136215+ (Clytia hemisphaerica)
CCTGGTTTGGCCatcatagcctaatttgcaatagtttttaCGACGAATTC
CGATTTGTTCCATTTTAACAAACGGTTTAAACCGGGcgaaatatcggaaa
aaatatcgaaaaacaaaaaaatccaaaaaatctaGATCAGAAAACAAAAA
GGAAAGCAAGAAAAGGAAACTAAAGACCAagaaatctatttcaaaagaGC
AGTGAAAGGTTAGTTGTATATTGCTTTAGTTGAGTGGTTTATTGATTGTC
TTTTGTTGGTTGGTTTTGAACTTggatatttttccaaaaaaatattggCT
AGTCAGCTAGTAGAAGATAGCTATtatccagacgtccgcgctcgatagga
tcgatcatcggaacggctcgatgacggatcgatatgtgatcgatggatta
cttatcgatcaggataggagatcgatggaagattcagccattaaaaagtc
ttgagtatcgatccttcgttgatccattatcgagctagtatttcaatcga
gtatatcgattcgtcatcaatcgttaatcgattcgtcatcgatcgttaat
cgagtatgcatcgattataaatcgattatgcatcgattatattataaatc
gattatgcatcaATTATGCATCTATCATGTATCGATCATGTATCGATCAT
ACATCGAGCCCgtaaattaattagcgggttgGGGACGCTTAttatattag
gtacccgagagtaccatATCGGCCATTTTTAAGCCGGCCCCCTCCGCTTT
TTTAAGTTCGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNtggctctatcattgtttttatggctggactacataattattcaac
aggacgtcctctttgaaaaaaggtctatttgcacgacaaggatgagagtt
acctgaatcaagaagttcgcaagacaattaattaaaactgaaagtttgaa
acaaaataaaacgtgcagcagccaaaatcaaccaaccaaaatttgtcatt
caattcccgagacagcgcttcgatttatAAGGCctggtttatacgctaaa
gtaaaaataattctgcaTATGTAAATGAGTCATTATTTGAGGTTCGGCca
aatttccgggaaacagcctatccggtggtgcgcggatctaggtgggttac
gcctcccccgtagatctttttcttgggaagttgatcttcaaattagtttt
cgaggttggcttggctcaaattttttcatctatggctcaaattttaggca
atttctcaaagtttttgaaaatgttaatttcattaaaaagcgccgggtta
tttttatttatttttttgcttgaaagtcaagtaaacgatatagcgctttc
acagtattaatctttgatacgcattgtggcgggacgctagtgtgactaac
tgcttgTCCCATCCGATGGGATAGATATAGGATGGCCCGCGAGAATGgcc
cgtgggcggccgccaatacgccctcggaatataaatataaaaaaattggg
tggcaaggtataaatcgatttaatggaaccaatcgaacttcatcaATCTT
AATCGANCCCGTGGGCGGCTGCCAATACGCCCTCggaatataaatataaa
aaaattgggcggcaaggtataaatcgatttaatggaaccaatcgaacttc
atcaATCTTAATCGAACTGATTTAACCTCAATCGTATTCATCGAACTGCG
ATCGAACTATAATTgtataatcgaacagtcatTGAACTTTACGAAAATGT
TTTCCAgttcgataggtgttcgattgggttcggtaatcgaacagctatcg
tttgatagggttcgattaagtttgattatgTTGGCCTTGGCCTTGATCTT
ATGACCAGAGTTACTGACGCACTGCTGAACTGTAGAGTTTTTTTTTATGG
TGACAAAAAGTATTATTAAATTACGCCAGACAAAATTGTTTGGTATGTta
caatattcaaatttttgacactgggctttcttcttttttagcgTTTTGGA
CGCATCTAGACGACGCTGATCTTAAAAATCAGCGTGTCTATCAccagaca
gttacatcaatatgccaaaaactttttgttcaaccaccttcacttcaaga
tagtacaccatagaatgaacttccttttataggatgaaccatattcatgt
ggctttcgggtggtgtcaattttttttttcaaatttcaaaaagtcaagtt
ggtattgataccaaaataagggggtgggtccccctttttttgaaaattag
ggaatctttaagttggtatcgataccaaaatgagggagtgggtccccctt
tttttaatttttgcttttgctggtatctgacttaaaatgttgtataatgt
aagtataaaaacttatttgaatcgtttacacTATACCCCTATATATCCTG
ATTccatataaaagcattcttcattctataattggaattaaatttttatt
cgacttttgctgctctcaatcctttcaatcaaccaaaattcattcaaaac
tagagTTGAACAAACTGAATCAAGTCTTAGCAGATCTTAGAACTTTTTAG
TCGTGATAAAAATTTTCTGTAAGTAACGTTCATCCGGCAGGGGGGGGNNN
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gaaGCCTGTCGGTGACTGTGCTAGGTATCGATTCCACAATCCATCGTGGA
TGAGGTGAGAGTGCGCTGACCTTGTTCCCTAGTGGTTCACGCTGCTCGCA
AGCTGGTCGCAGTATAAACCATCGCGTAGACGGTTCTAAGTGAGACGACT
CCTAGACCGCTCAATACGGAACCGGGTGTCCTCTGCAAAGAGCAGCCAGT
CATCATCATATATATTACGATGAATATGTAATCTAATCTAAAAAGGAAAA
Cattaggcaattacttttttattttctggtttatggacattagtatatgt
aatcacatgataacgagtgcaattttcgaattgtacgagttattatgtga
ttacaaGCTAATCGCACTATTTTTTCTCCGTTAGGAAAAGTAAATTCCac
taaaagtcatatttttctcttctctctatgttattcttttattgttgttt
atagattttctttctctcaaaatgaaaaaaaaaatttactcttGAAGTTG
TTTTTTGTGGATAGGGAAATTCTATGGGGAAGTTCTCTGACATTAAAGAA
AGGATCAAAGTATCTTTACATTGGCAGAATAGGGCACAGCTGTGTTAGAT
CGTTTAACCTcctctctctttctcttcttttcttttgttttcctgtttaa
aagtaaaggttttttatttctttcttcttttttgaaggtcggaggagaaa
taataaataaaagtttttcaaatttctatcttttttttcttttttttggc
aaaaaaaatgcGGATCCGTAAACCAATAGATAAAAAGTATTTGCCTTAAC
CTTTCCACCacgctgttttttatattttcatgctgTCCCCACGcaacatt
ttttgacaaaatggaCAAGAACTAAAATCTTTTGATAATAAATTAGCTAT
AATTAAATTATGCAGCTTTTAGGTTGGGTACCAATCCAAATAGAATACTC
TAACTAAAATGGTAGCTCCACATTTACTAAagttttttcctcatttttcg
gtaatgtcacttttttggtatttttcacttCCTATGCAAAAAAAAGTAGG
GGAAGTTTAATTATTAAATCTTTCTTTAGTATTTTATCATTATATACTTA
CTACTAAAGCCATATACCAAAAATAAGCATCCAAAAAACATTCTACTGCT
CACATGCTTTCCAAATATCAGTCACTTTTCTCAGAAATCAGTGCTCTTCC
GTCCACCATTTTGAAGCAGTGTTTTTCTTCGAAAAGTGCTGACTCACCAC
GTGATCttaacattacatcattatatATCAACGGAAAAATTAGACTCtct
actttcttttactttttttttgaacgATAACCAAGCAAGCCAATAAAAGA
TATGGCTTGAGGTTGAGAAAGACGTGTCTATCAAATTGCATAAATATACG
GCATTTGGAACGTATCAAAAACGTACATGTACAGCATTCGGGGTGGAAAG
GTTAAGAATATAATAATATAAATGGGGCGACATCTCTTCAGTTAGAGCAA
TTGACggtactttctaagggaatttcaccaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaatattaaaaacaagtcag
aaaatcacacgccctttttgaagttttgaaaagAGCACGACCGAACTCGA
CGAGAGCAAGAAGTGAAGTGatcattataataataatataaataATGCGC
AGCTCCACAGGATCTGTAGAACCTCTGATGTTAGCCATTTTAGTCCTTCG
TATGCCCtcttcttgttttttgaaattattaacaTTTTTAATGATGACCA
ATACACAAGAAGAGGTCGCCCTGCCATGTCTTTGTTGGATCAAGTTGTTG
GTCATAAAATGATTTCTATTAGTCAATTTTGTTCTCTTGCCTTAAGCAAG
AAGAGAAGTAATGATAtgtgaatttgaatttaaaactaGTTCGACATGGG
AAAATACCTCTAAGTGAATAGGCCTCACGGTGAGATACTTTCCCATGTCC
AACCATGTCCATTTAATTGGCGGTTGtagaattttattattattattatt
aagttCCGcaacgaccctggacaccgccgtacattgtacggtgtTGTACG
GTAAGTCCGACCACGgttgaatatctaaaaatttACATGTGTACGGTGGG
ATATatgtaacctgagatcagattgtggttgttttctgcagGACCCTgct
gacgcaccggactgtccggtgtatttatccggtggcaaaaagtatccttt
cgctacaccggacgcaataagtccggtgtcagtccggtgttgcatacagg
gaattttggacgccggacatttattataaaacaaaaactaagaaacaccg
gacgcaccggactggtcatgtccggtgttttgattgtccggtgggaaaaa
atatctttctccgacaccggacatccgacttccttaagtccNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNgtgtagaaattgtccggtggtaaa
aaaaattctcattttacaccggactttcgcgtgtccggtgttcgttaagt
ccggtgcgtcggcagggtccttttATTTTCTGCCCACAaggctgaagctc
taaagggatgggtgaaaacatacaatctgacgaatatgcaatctcgaaat
cgtaaggaccgcgttcgtctaaaaggactggggatgacaacaaagttgca
tGATTGTGTTTGTGAATAGGGCGCcatatcagtttttgactttctggcgc
acaacaagattcttgttgtagaattttccgcgggaggactattttcctca
gatgtataattttcaagtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtcccgcct
ttgcgggattttggctcaagtgcttgagtgcagcatagggttcaaagtcc
aaatatgcgtttcccgtaatttttgtatgaacagttaggtctatactgtc
atGTGCTGATTTTGATCACCTAGTATATTTTGAGTTgtttaatcacttgt
ggtttgaaTCAGAAGCTAATAAATACTTTAAGTTGTTTTATTTACTTAAC
ATTTATCTCCCTAGCGGAGCGCCACAGCATGTTTTTCATCTATTCATGAT
TAACATCGTTATCTGCGAAAAAAtgctttttgcgaagcgaatttatgagc
gaagcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNtgacagaaaggatcttcatcatccc
ttgacttttaacagcaagtatcaagtatcaaataaggtcaatcaatgaga
ggttttcgcaagtcgcgcgggctggaggagtgctcttttagtgaacgaaa
cttaccttgcaaaaccaagtgaatattctatgataaagaagtacggaggt
aatcaaatctgtcgaatttgtcaagaaataaatcaaaactgcccaagaac
caacaagccatctttgtacatttttgtttttgtttcattgttatgttttg
atgatttcgacagacgattcgtgattcgaataaaaaatgttcgatcgttc
gattttattaaggcaccatttacactagaataactagaagggaaaaaaga
gcgatgcgcggacggcgtgttgtgccgccgtggattatgtggtgtgtttg
gggcattaaccattaaggctcttacgaccctgtctctatacaaagaaaca
cacttttaagaaacacgaggctcagaatgcctgaaaactaagaaacatct
aagaaacatgctgaggctgaaaatgaaaaaatgacatttttaattcgttt
ttttaagaaccttctaatcaaaacatgaaaaataggctgattatgtcaga
aagtttagaaacatgtaagaaacatttaaggctcaaaaggctgatttctt
aagaaacattgaggctgcttggtaaaactagtttcttaaaaNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttattagaggg
atttttagagcgtctcttattttgctagcaacttgcgaattgaggtggag
tctggatcgcttcgcaacccttatacaatacggctagttatATCTCCGTA
GTAAAACGCCACACATTTCAGAAAACCAGCGATTCTACAAAGATCTCAAA
TTTGTCTCAGCTGCTCAAACCTTTAACcgacaaaattctgcaaaacgtGC
AGAATAGGCATAAATGGGcgagtcaaattttaaaatattcaaaaggatag
cacagttgtgacaaattttgaatccaacttTTTTACCCGTATACAGCTCG
GAAAATTAACCGCCTTCGGCGGTCGATGATGCTTCCGggaaagcaccacc
gtactatGTCCGAATTTGGTACGGTGGTGAAATGGGTTAACTCGAAATCC
ACCGTACACCCCACCGTACCCACCGTACACCCACCAGACATGACCGTACA
ATCGTGTTCCGCACTGGAAAAGAGTGCACCTGATAGAGATCTCcacctga
taaattttggtccgAACAAAGGTTCACCTACACCTcggaaattggcccaa
aaaaggcaaaaaattgctaaaattagctgCACTCGAGGAGAAAATAGTAG
AGCTTTGCACTTGGGGTTAAAAAGCCGTCTGCACTTACCTGAGAAAACCT
AAAATGTTGCACCTGCACTCGACTTTTTCCGAGTTGTCCAAACATGCCAT
CTGCAAACTGGAACATGTCAAATCCCTGGAAAATCTATACCTGTTCTTGT
TATTGACCAAATAGGATTTCAAATTGTTACATAGATCCAAGCTGCTAGGA
TTACTCCAGTAAATTACCCAACAACGAACAACGACTGAAAACATCTCAAC
TTTCTTTTGCTCTCGCTGCtcgagtctaccattttgaaagcATGCTTTTG
TTAGAAGCTAGCCCGGGGTCCTTTAaaccttttttatagactggatggcg
cgattaacaCGGTAGTCAGTCAaggacaccttcaaattagcctatcatac
tatcataggctgattagcctatcataggctatttagactattttattgCC
ACCGCAACGAGCGCAGCGAGTGAGGAGGCAGTTATAGTTTCAGGCGTAAG
gaatattggactggaatctcgaatttttgcgcgttttgttttgttttgtc
gcgcaagcctacccgtagttagtctcttccgtaaatgttcggttttcttt
ccgggacggcagttgctagcctaaaaactttttctttataatagcaggcg
ccgcgggcattttactcagctttcgacagtagcttctattccgcttgtag
aattttgcccgattggtcAACATGCAGGAAATGGAATGGAGAATTTTCTG
GAAGTTCTTTTAAATTCAAGCTCTCTCTTCCTGCAGTCAAAATACTTATA
CGCATTCACTTTTGACTTTCGGATTAAACAAGATATATACATAtaccaat
cagtgaatttgctgacagtcaaattacaatctgtctcctgtcttagacat
tcaggagattgattcatttttcgacccAAACAGTTTGTCCCCAACAATca
ttaaaatgataatagtagaacaatgattgaatatggacaaaagtgattat
tgttggtggttgaattggcaacgaaattccactgtaactaaatttattcg
acaatcgtcattcaacatACTCTACTCCCAACAAGAATGCTTAAAGATCC
TGGCGGTAATGGTACTTCGACAGtaagtacaaatatttttttctttgtct
acttttataagacttggttttattaatcttttatgtttaacctgtgttct
tgttgatacttaccaggcactatttgggaaattattatcaaagattgaaa
gaaactttagtgaactatttttgaggaaatttcagtacactcaccatata
ggcagtcatcaaaaaattgttctattcgcgtcacccgcccgcatcaaatt
ttccgctgattttccggtgcggagatgcggaaaaaaatctgggaaaagca
atttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgg
gaaaagcaatttgttcttttaaagtatagcttttttctcaattgctctga
cgaccatcgaaaaattgttttgctcgcgttaccacccacccctgagttac
tggcatGATTAAAGAAAcagggaatgtttttgaccacCCGTCCACCCGCA
TGCATTTTTcacacccgttgcgacgcgaacagagcattttttcgatgacc
gccatatcatctaatttcatgtttatgaggattcgtttaccttgaaaacg
caatattacctcgttctgctactattaccacgttacgtcatgattttcca
tccttctacacgatattgctgttacaactgcaagataactggtatatctt
tttaatgtaaacaattttgtccatgagatcccttATCATGCCGTTGGACA
AAGCCCTGAATGTACGATATTTCCTGTTAGTACAtgcttcctgctcatca
atattgcctcgttactgatactattaccacgttacgtcctatcatcttcc
atcctttacacaatgctgttacagcttctagattactggtaaatccattt
aatgtaaacaattttagatcacgatatcctttgttaaaccgtTGGAAAAA
CCCCTAAGTACCGTAAGTTTGTGTAATATTGACAttcctcgtctaattcc
gacacccttctttagagaaaagaataatatgaaagtttcaatcactgatt
gaaaaaggtttattcctctctgaccactaagcNgaataatatgaaagctt
caatcactgattgaaaaaggtttattcctctctgaccactaagcaaagaa
aaacaatttcaaccttcttataaatttcagctgataaacagggtgtcgga
attagaggaggggtgtcgacattagaccaagttacggtacgttgttacct
gtcaatttttggttcctgctcgttatgtttctggctcatagcatttctta
agctgtttggttctactatatttcatttatatttcaaattagttgaaata
aatatagttgcatgtcttttgactggtttactgtctgtaattgattctac
ctggacacttttcctaatgaatgttttaagattcgtattttattctttgt
aaaaagtaattcacatttttagaaaaaaaatatgttNNNNNgaaaaaaaa
tatgtttcatttatgttagcttattcattgatatctcaaagaaaatgctg
agaagaatcattctaactattccaaatcatttccaaactttttttataaa
gcaTTAGAAACCCTTAATTatcattaattagtttttacaagcatttgtac
tagcgggtggcagttagtgaaagctatggctagtataggctatttagccg
aaaatcgataaaaacctcgatttctgacgaaatataaaaaGTCGCGTCTT
CTCTAAGGAATACATGGTTTCTCATTGTCAGAAAAATGCTCTTGGTCCAT
GGtcatgacaaattttgactttgggtcaattttggtttaggaaatattcc
actttttggtACTTCGCATGCGTGCGCATGCGCAGGGTAAGAAAATCGGG
CTTTTTGTCGATTCAGCAGAACTtcattatcagaaaattagcctataatC
GGTTAGTTAGCCGATGGATAATAATGTAAACCATGCGTTTTGgactagac
tatgctatagtctaagacgagtttcatctaagaggaacaaacttAAAAAC
AGGAGTTTTTTTCAGGGGTAGCTGTTGTCTGTTGTAAACACAGAATCTAT
CTGCCgcgcaacatattacgttttatagtatacaaactatgttatatcat
ggcgcagtagtgtagtggttatcaatcTTGACTGCAGTCCAGGAGGTCGG
GGTATGATTCCCGCTCGGTgctgtgattcacttggcaagtgaatgtacct
tcgcccgggccaacccatgccatgtgaggggaattgggtagacagaaact
caagaaGCCTGTCGGTGACTGTGCTAGGTATCGATTCCACAATCCATCGT
AGATGAGGTTAGAGTGCGCTGGCCTTGTTCCCTAGTGGTTCACGCTGGAC
TTAACACACTCGATCCAAAAACTGTATGTCAGTGTCTCGCAAGCTGGTCG
CAGTATAAACCATCGCGTAGACGGTTCTAATCAGACGATTCCTAGACCGC
TCGATACGGAACCGGGTGTTCTCTGCAAAGAGCAGCCAGTCATCATCATC
NCTCAATACGGAACCGGGTGTCCTCTGCAAAGAGCAGCCAGTCATCATCA
TATATATTACGATGAATATGTAATCTAAtctaaaaaggaaaatattaggc
aattacttttttattttctggtttatggacattagtatatgtaatcacat
gataacgagtgcaattttcgaattgtacgagttgtTATGTGATTACAAGC
TAATCGCACTATTTTTTCTCCGTTAGGAAAAGTAAATTCCcctaaaagtc
atatttttctcttctctctatgttattcttttattattgtttatagattt
tctttctctcaaaatgaaaaaaaaaatttactcttGAAGTTGTTTTTTGT
GGATAGGGAAATTCCATGGGGAAGTTCCCTGACATTAAAGAAAGGATCAA
AGTATCTTTACATTGGCAGAATAGGGCACAGCTGTGTTAGATCGTTTAAC
ctcctctctctctctcttcttttcttttgtttacctGTTTAaaagtaaag
gttttttatttctttcttcttttttgaaggtcggaggagaaataataaat
aaaagtttttcaaatttctatcttttttttctttttttttggtaaaaaaa
atgcGGATCCGTAAACCAATAGATAAAAAGTATTTGCCTTAACCTTTCCA
CCacgctgttttttatattttaatgcTGTCCCCACGcaacattttttgac
aaaatggaCAAGAACTAAAATCTTTTGATAATAAATTAGCTTTAATTAAA
TTATGCAGCTTTTAGGTTGGGTACCAATCCAAATAGAATACTCTAACTAA
AATGGTAGCTCCACATTTACTAAagttttttcctcatttttcggtaatgt
cacttttttggtatttttcacttcctatgcaaaaaaaagtaggcgaagtt
taattattaaatctttctttagtattttattattatatacTTACTCCTAA
AGCCATATACCAAAAATAAGCATCCAAAAAACATTCTGCTGCTCACATGC
TTTCCAAATATCAGTCACTTTTCTCAGAAATCAGTGCTCTTCCGTCCACC
ATTTTGAAGCAGTGTTTTTCTTCGAAAAGTGCTGACTCACCACGTGATCt
taacattacatcattatatATCAACGGAAAAATTAGACTCtctactttct
tttactttttttttgaacgATAACCAAGCAAGCCAATAAAAGATATGGCT
TGAGGTTGAGAAAGACGTGTCTATCAAATTGCATAAATATACGGCATTTG
GAACGTATCAAAAACGTATATGTACAGCGTTGGGGTGGAAAGGTTAAGAA
TATAATAATATAAATGGGGCGACATCTCTTCAGTTAGAGCAATTGACggt
actttctaagggaatttcaccatggcaattcggccaccataatttgagca
tacaattcaatattcCAGAtaaggcaaaaaggtctattcatgTTTAATGC
TAGCGACAGCtaggaatttttttcacattgatgataataaagatcaaaga
atcactcatttgaaaattataatCATAGCACAGCTATTAGaaagttttga
tgtttttgttattttccatcgccatctttttgattttttttttggttttg
ataatattccactcctgtttatcttttcaacaagcacaagaCCAGTATGC
AATTCAAATTCTATCTGCCGCTGCAgatactttaatttttttcactacTT
GAGATACTTTAATTTTTCTACTGTACTGCAGTGCAAAAATTAGTCCCCAC
AAAGGTGTGAATTCTTTCAAGCACATCAAGCTAACCAATCTGATAAAAGC
CAAATCTAACctcaatttttaaaaagctcAATTACAAAACTTGATCAAAT
ATTAATAGTTCAAGTTTCGTCTTATAAATcctaaaagttttgaaatctcT
TTTGAAGTGTCTCTTGACTGTTTGAATTAAGCAGTCAGACAATATTCATA
ATCATCAAGATTCAAGAATATTAAGATTTTTAATGATCTTTTAGAGTAGA
CTGGAATACTTTTTTTTACCTCAATCTTACCTGGGGACCTGGGGATTGAC
AACTTTCTCatggataaaaaattttcatttatcgATTTAGTCCCTTCGAT
TAATCAtcaattgataaaaaaactaaGTAAAATTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCTCAATCGAACGCGAGGAAGACAGATACGGTAtatat
cccacctccacgtgatgtcttttgaccaatgaaatcgttagaatcttact
gatgcgggataatttaatttttttcactacTTGAGATACTTTAATTTTTC
TACTGTACTGCAGTGCAAAAATTAGTCCCCACAAAGGTGTGAATTCTTTC
AAGCACATCAAGCTAACCAATCTGATAAAAGCCAAATCTAACctcaattt
ttaaaaagctcAATTACAAAACTTGATCAAATATTAATAGTTCAAGTTTC
GTCTTATAAATcctaaaagttttgaaatctcTTTTGAAGTGTCTCTTGAC
TGTTTGAATTAAGCAGTCAGACAATATTCATAATCATCAAGATTCAAGAA
TATCAAGATTTTTAATGATCTTTTAGAGTAAACTGGAATACTTTTTTTTA
CCTCAATCTTACATGACCTGGGGATTGACAACTTTCTCatggataaaaaa
ttttcatttatcgATTTAGTCCCTTCGATTAATCAtcaattgataaaaaa
actaaGTAAAATTTAAAACCTGTGATGATGATTTTTGCAACTTTTCTTAT
TTTAGCTACAATGAAGATTAGTTTACAAAGCGAGCTAGGGGGTCTAGAGA
TTGGGTACTCCTGAATCTCTTTGCCATAAAAATGTCCTGATTTTAGGATA
ATTGTCCCGAATCGCCATTAAGATTCAGCCAAATTGAGATCGTGTTCACT
TTTGAAGGGCAGGCATGGGCAGGGTGTGCTATCACCAAATTTTTTACAGA
TGCTTGTCCCGAAACATGTATAGTTGGACAAGCGAAAGGCTGAAAAGGTT
ACTTTGATTACGGACTATTATGGGACTGTTAATGTAACACTCTTATTGCA
TTTTCCAGTGAAAGATGTCATGCATATGCAATAATAATTCAACCAACGAG
ATCCCTTGTATCAATAACAAGTGTGTGCTGTCATCATCCACTGATCAACG
TTGCTTCACATCCCTAGAGAAAGCTCACAAAGGATGTGTTGACAAGAGGC
GCTGTTACAGTCACAAAAATCCTTTTAAAAGACCTTTATTAGAGTGTTGT
GATGTGCAAACTAATGGTAATCTATGCAATGAAAATCAACAATTGCGATA
CCTCTTGATCGGTAAGAACCTGGACCTTCTCTCTAGAAAGTGTTGCTTTT
ATATTTGTGAATTTCTTAACAAAGGTTAAACCTGAGTTATCCTTATGTAA
ATTTCCTCTTTACTCATTGAATCTTCACATATTACTTAAATTATAAGCAC
ATATAAATGGCCTGTTGATTAAATTATGAGTCTAGAAAGTAAGCAGAAAC
GCTAAAGGTAAGTGGAGAATCCCGGTGAAAGGAGTGAGTGGCGCTCTCCT
ATCTTTGCGTAGACAGCTTTATGAAAAGAGCGTCTTCGAGTCTCACCAAC
AGTGCAGTGGTGACAAACTTACTTGAAAACCGTGAATTTCTTTCAGATGC
GAACGGCCCTGTGATGAAAATGACACCTGGCAACACAGACCAATCTCCGA
CGTCACAAATTCCTATTCAAGAAGCCGCTCCTTTCAGATTGAGCAACGTT
CAGATTGCAGCTGTCATCTCCGTTCCTTTTTCTTTGCTCTTCATTGGGCT
GTCTCTGCTCGTGCTCATCCGTGGCAAACGCAACAAAAGGAAAGCCAAGA
AAGTTGAAGAAGAATACAACAGACGAGAAGAAGTTCTTTTGGGTTTGGAA
TCGTTGAACTTGCAGGAAATCACAACTTCAGGTCAGTTTGTTGTAAATAT
CAGGCCAGAACTTCTAATTCGTTCAGTCGTTTAAATAAATTATCTCAAAA
CCGTATTATTATGTAATACCTGTATTATGCTCATTATAAACGACATATGT
TCAGTTATGAACAATATTAAGCTGTAGACAGGAAAAGAGAACGATATTTG
ACCGAGATTTTTGGCGAGATTCTCAACATTTTAGATTCAAGCATACAAAG
AAATTTAATACTAGTGGGAGGTACAATGTTACCTATCCTCGTGAAAATAC
CGAGAATAATTTTTTCAGCAATTTGAATCATCAGAGTGCCTTTATTCTGA
ATTATTCATTTTCGTCATCCATTATAGGGAGTGGTGCTGGTCTACCTTTG
TTGATCCAGAGAACCATCGCCCGGCAGATCATCCTTCACGAAGTCATCGG
TACAGGACGTTTCGGCTACGTCCATCGAGGAACGTGGCACGACCAGAACG
TGGCTGTCAAACTGTTTCTCACCAACGAAGAAAACTCATGGTTCCGAGAA
GCGCAAGTGTACCAAACTACTATGCTCAGGCATGAAAATATTCTAGGTAA
GGGGGAAGCTGTTGAGGGTTTGTGCAAAGCCTTTGTTTCTGCTTTTGTGT
GTGATGTGAAGACTATGAATCCGTGAAAGTCcgtatttttgtgttttggg
cttaattgaattgaaatgaaatgaacCTGAAAACAGAGTTTAATTTCAAA
TCCCTAAAAAAACCATGCGAAATACGACGCTTGCTTATTATTAGAAACTA
AAACAAATACATCGAATAATTAAATCTTCTATCAAGTGAGTGCTTACATA
GGTTATCTCTTTAAAATGTCGAGCAATCTGTAAGAATTCATCAATGTTAT
CCACACACTTTCTTCAGGTTTCATTGCAGCAGACAACAAAGACACAGGTG
CTTGTACTGAGCTTTGGTTGGTGACAGAATACCACNGATCGGTAAGAACC
TGGACCTTCTCTCTAGAAAGTGTTGCTTTTATATTTGTGAATTTCTTA

Coding sequence (CDS) from alignment at scaffold_391:112218..136215+

>TCONS_00063511 ID=TCONS_00063511|Name=TCONS_00063511|organism=Clytia hemisphaerica|type=CDS|length=3528bp|location=Sequence derived from alignment at scaffold_391:112218..136215+ (Clytia hemisphaerica)
ATGTCATGCATATGCAATAATAATTCAACCAACGAGATCCCTTGTATCAA
TAACAAGTGTGTGCTGTCATCATCCACTGATCAACGTTGCTTCACATCCC
TAGAGAAAGCTCACAAAGGATGTGTTGACAAGAGGCGCTGTTACAGTCAC
AAAAATCCTTTTAAAAGACCTTTATTAGAGTGTTGTGATGTGCAAACTAA
TGGTAATCTATGCAATGAAAATCAACAATTGCGATACCTCTTGATCGATG
CGAACGGCCCTGTGATGAAAATGACACCTGGCAACACAGACCAATCTCCG
ACGTCACAAATTCCTATTCAAGAAGCCGCTCCTTTCAGATTGAGCAACGT
TCAGATTGCAGCTGTCATCTCCGTTCCTTTTTCTTTGCTCTTCATTGGGC
TGTCTCTGCTCGTGCTCATCCGTGGCAAACGCAACAAAAGGAAAGCCAAG
AAAGTTGAAGAAGAATACAACAGACGAGAAGAAGTTCTTTTGGGTTTGGA
ATCGTTGAACTTGCAGGAAATCACAACTTCAGGGAGTGGTGCTGGTCTAC
CTTTGTTGATCCAGAGAACCATCGCCCGGCAGATCATCCTTCACGAAGTC
ATCGGTACAGGACGTTTCGGCTACGTCCATCGAGGAACGTGGCACGACCA
GAACGTGGCTGTCAAACTGTTTCTCACCAACGAAGAAAACTCATGGTTCC
GAGAAGCGCAAGTGTACCAAACTACTATGCTCAGGCATGAAAATATTCTA
GGTTTCATTGCAGCAGACAACAAAGACACAGGTGCTTGTACTGAGCTTTG
GTTGGTGACAGAATACCACNGATCGGTAAGAACCTGGACCTTCTCTCTAG
AAAGTGTTGCTTTTATATTTGTGAATTTCTTAATGTCATGCATATGCAAT
AATAATTCAACCAACGAGATCCCTTGTATCAATAACAAGTGTGTGCTGTC
ATCATCCACTGATCAACGTTGCTTCACATCCCTAGAGAAAGCTCACAAAG
GATGTGTTGACAAGAGGCGCTGTTACAGTCACAAAAATCCTTTTAAAAGA
CCTTTATTAGAGTGTTGTGATGTGCAAACTAATGGTAATCTATGCAATGA
AAATCAACAATTGCGATACCTCTTGATCGATGCGAACGGCCCTGTGATGA
AAATGACACCTGGCAACACAGACCAATCTCCGACGTCACAAATTCCTATT
CAAGAAGCCGCTCCTTTCAGATTGAGCAACGTTCAGATTGCAGCTGTCAT
CTCCGTTCCTTTTTCTTTGCTCTTCATTGGGCTGTCTCTGCTCGTGCTCA
TCCGTGGCAAACGCAACAAAAGGAAAGCCAAGAAAGTTGAAGAAGAATAC
AACAGACGAGAAGAAGTTCTTTTGGGTTTGGAATCGTTGAACTTGCAGGA
AATCACAACTTCAGGGAGTGGTGCTGGTCTACCTTTGTTGATCCAGAGAA
CCATCGCCCGGCAGATCATCCTTCACGAAGTCATCGGTACAGGACGTTTC
GGCTACGTCCATCGAGGAACGTGGCACGACCAGAACGTGGCTGTCAAACT
GTTTCTCACCAACGAAGAAAACTCATGGTTCCGAGAAGCGCAAGTGTACC
AAACTACTATGCTCAGGCATGAAAATATTCTAGGTTTCATTGCAGCAGAC
AACAAAGACACAGGTGCTTGTACTGAGCTTTGGTTGGTGACAGAATACCA
CNGATCGGTAAGAACCTGGACCTTCTCTCTAGAAAGTGTTGCTTTTATAT
TTGTGAATTTCTTAATGTCATGCATATGCAATAATAATTCAACCAACGAG
ATCCCTTGTATCAATAACAAGTGTGTGCTGTCATCATCCACTGATCAACG
TTGCTTCACATCCCTAGAGAAAGCTCACAAAGGATGTGTTGACAAGAGGC
GCTGTTACAGTCACAAAAATCCTTTTAAAAGACCTTTATTAGAGTGTTGT
GATGTGCAAACTAATGGTAATCTATGCAATGAAAATCAACAATTGCGATA
CCTCTTGATCGATGCGAACGGCCCTGTGATGAAAATGACACCTGGCAACA
CAGACCAATCTCCGACGTCACAAATTCCTATTCAAGAAGCCGCTCCTTTC
AGATTGAGCAACGTTCAGATTGCAGCTGTCATCTCCGTTCCTTTTTCTTT
GCTCTTCATTGGGCTGTCTCTGCTCGTGCTCATCCGTGGCAAACGCAACA
AAAGGAAAGCCAAGAAAGTTGAAGAAGAATACAACAGACGAGAAGAAGTT
CTTTTGGGTTTGGAATCGTTGAACTTGCAGGAAATCACAACTTCAGGGAG
TGGTGCTGGTCTACCTTTGTTGATCCAGAGAACCATCGCCCGGCAGATCA
TCCTTCACGAAGTCATCGGTACAGGACGTTTCGGCTACGTCCATCGAGGA
ACGTGGCACGACCAGAACGTGGCTGTCAAACTGTTTCTCACCAACGAAGA
AAACTCATGGTTCCGAGAAGCGCAAGTGTACCAAACTACTATGCTCAGGC
ATGAAAATATTCTAGGTTTCATTGCAGCAGACAACAAAGACACAGGTGCT
TGTACTGAGCTTTGGTTGGTGACAGAATACCACNGATCGGTAAGAACCTG
GACCTTCTCTCTAGAAAGTGTTGCTTTTATATTTGTGAATTTCTTAATGT
CATGCATATGCAATAATAATTCAACCAACGAGATCCCTTGTATCAATAAC
AAGTGTGTGCTGTCATCATCCACTGATCAACGTTGCTTCACATCCCTAGA
GAAAGCTCACAAAGGATGTGTTGACAAGAGGCGCTGTTACAGTCACAAAA
ATCCTTTTAAAAGACCTTTATTAGAGTGTTGTGATGTGCAAACTAATGGT
AATCTATGCAATGAAAATCAACAATTGCGATACCTCTTGATCGATGCGAA
CGGCCCTGTGATGAAAATGACACCTGGCAACACAGACCAATCTCCGACGT
CACAAATTCCTATTCAAGAAGCCGCTCCTTTCAGATTGAGCAACGTTCAG
ATTGCAGCTGTCATCTCCGTTCCTTTTTCTTTGCTCTTCATTGGGCTGTC
TCTGCTCGTGCTCATCCGTGGCAAACGCAACAAAAGGAAAGCCAAGAAAG
TTGAAGAAGAATACAACAGACGAGAAGAAGTTCTTTTGGGTTTGGAATCG
TTGAACTTGCAGGAAATCACAACTTCAGGGAGTGGTGCTGGTCTACCTTT
GTTGATCCAGAGAACCATCGCCCGGCAGATCATCCTTCACGAAGTCATCG
GTACAGGACGTTTCGGCTACGTCCATCGAGGAACGTGGCACGACCAGAAC
GTGGCTGTCAAACTGTTTCTCACCAACGAAGAAAACTCATGGTTCCGAGA
AGCGCAAGTGTACCAAACTACTATGCTCAGGCATGAAAATATTCTAGGTT
TCATTGCAGCAGACAACAAAGACACAGGTGCTTGTACTGAGCTTTGGTTG
GTGACAGAATACCACNGATCGGTAAGAACCTGGACCTTCTCTCTAGAAAG
TGTTGCTTTTATATTTGTGAATTTCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039813XLOC_039813Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063511-exon-scaffold_391-1491911889:112218..112425TCONS_00063511-exon-scaffold_391-1491911889:112218..112425Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1510915933:112218..112425TCONS_00063511-exon-scaffold_391-1510915933:112218..112425Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1575043694:112218..112425TCONS_00063511-exon-scaffold_391-1575043694:112218..112425Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1491911889:134326..134578TCONS_00063511-exon-scaffold_391-1491911889:134326..134578Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1510915933:134326..134578TCONS_00063511-exon-scaffold_391-1510915933:134326..134578Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1575043694:134326..134578TCONS_00063511-exon-scaffold_391-1575043694:134326..134578Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1491911889:134914..135198TCONS_00063511-exon-scaffold_391-1491911889:134914..135198Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1510915933:134914..135198TCONS_00063511-exon-scaffold_391-1510915933:134914..135198Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1575043694:134914..135198TCONS_00063511-exon-scaffold_391-1575043694:134914..135198Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1491911889:135545..135763TCONS_00063511-exon-scaffold_391-1491911889:135545..135763Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1510915933:135545..135763TCONS_00063511-exon-scaffold_391-1510915933:135545..135763Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1575043694:135545..135763TCONS_00063511-exon-scaffold_391-1575043694:135545..135763Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1491911889:136085..136215TCONS_00063511-exon-scaffold_391-1491911889:136085..136215Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1510915933:136085..136215TCONS_00063511-exon-scaffold_391-1510915933:136085..136215Clytia hemisphaericaexon
TCONS_00063511-exon-scaffold_391-1575043694:136085..136215TCONS_00063511-exon-scaffold_391-1575043694:136085..136215Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063511-proteinTCONS_00063511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_391supercontigscaffold_391:112218..136215 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.1073	18.2142	20.0855	21.5812	6.70422	6.7426	8.13467	10.3354	7.98539	8.02999	14.5129	7.67533	8.7799	10.9905	5.81507	7.66112	8.49481	12.0187	8.16728	12.9977	10.8275	10.2306	10.4439	15.6141	14.0718	15.1571	11.5132	6.94437	10.0325	15.0767
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003605GS_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR017441Protein_kinase_ATP_BS
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004675transmembrane receptor protein serine/threonine kinase activity
GO:0004672protein kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004675 transmembrane receptor protein serine/threonine kinase activity
Blast
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BLAST of TCONS_00063511 vs. Swiss-Prot (Human)
Match: ACV1C (Activin receptor type-1C OS=Homo sapiens GN=ACVR1C PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.693e-44
Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 2 
Query:  515 TSQIPIQEAAPFRLSNVQIAAVISVPXXXXXXXXXXXXXXRGKRN----KRKAKKVEEEYNRREEVLLG--LESLNLQEITTSGSGAGLPLLIQRTIARQIILHEVIGTGRFGYVHRGTWHDQNVAVKLFLTNEENSWFREAQVYQTTMLRHENILGFIAADNKDTGACTELWLVTEYH 1033
            T  +P       +L  +++A +I+VP  LL I   L V     R     K+K   VEE  +    V  G  L+ L + ++T SGSG+GLPLL+QRTIAR I+L E++G GRFG V  G W  ++VAVK+F + +E SWFREA++YQT MLRHENILGFIAADNKD G  T+LWLV+EYH
Sbjct:   96 TLHLPTASPNAPKLGPMELAIIITVPVCLLSIAAMLTVWACQGRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDL-IYDVTASGSGSGLPLLVQRTIARTIVLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYH 273
The following BLAST results are available for this feature:
BLAST of TCONS_00063511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACV1C7.693e-4450.28Activin receptor type-1C OS=Homo sapiens GN=ACVR1C... [more]
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