Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063472 ID=TCONS_00063472|Name=TCONS_00063472|organism=Clytia hemisphaerica|type=transcript|length=167bp CCAGCATCTCCTTGATGAGTTTGATATTGATCTACTTGGAATCCTGCTAA AGGGGTGTAAGGTTCAAGCGTTGTGAAATTCTCCGGCTTGATGTATTTTT CATCATCCGCTTCTCCTGAcagatttttgtcaaatgaCTCAGACATATAA TCATACGTCGATTCTTC Run BLAST on NCBI transcript from alignment at scaffold_39:348327..348844- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063472 ID=TCONS_00063472|Name=TCONS_00063472|organism=Clytia hemisphaerica|type=transcript|length=518bp|location=Sequence derived from alignment at scaffold_39:348327..348844- (Clytia hemisphaerica) CCAGCATCTCCTTGATGAGTTTGATATTGATCTACTTGGAATCCTGCTAA
AGGGGTGTAAGGTTCGAGCGTTGTGAAATTCTCCGGTTTGATATATTTTT
CATCATTGGTGTAATCTCCAGCATCTCCTTGATGAGTTTGATATTGATCT
ACTTGGAATACTGCTAAAGGGGTGTAAGGTTCGAGCGTTGTGAAATTCTC
CGGTTTGATGTATTTTTCATCATTGTTGTAATCTCCAGCATCTCCTTGAT
GAGTTTGATATTGATCTGCTTGGAATACTGCTAAAGGGGTGTAAGGTTCA
AGCGTTGTAAAATTCTCCGGTTTGATGTATTTTTCATCATTGGTGTAATC
TCCAGCATCTCCTTGATGAGTTTGATATTGATTTACATGGAATCCTGCTA
AAGGGGTGTAAGGTTCAAGCGTTGTGAAATTCTCCGGCTTGATGTATTTT
TCATCATCCGCTTCTCCTGACAGATTTTTGTCAAATGACTCAGACATATA
ATCATACGTCGATTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00063472-exon-scaffold_39-1575043694:348784..348844 | TCONS_00063472-exon-scaffold_39-1575043694:348784..348844 | Clytia hemisphaerica | exon |
TCONS_00063472-exon-scaffold_39-1575043694:348327..348432 | TCONS_00063472-exon-scaffold_39-1575043694:348327..348432 | Clytia hemisphaerica | exon |
TCONS_00063472-exon-scaffold_39-1510915933:348784..348844 | TCONS_00063472-exon-scaffold_39-1510915933:348784..348844 | Clytia hemisphaerica | exon |
TCONS_00063472-exon-scaffold_39-1510915933:348327..348432 | TCONS_00063472-exon-scaffold_39-1510915933:348327..348432 | Clytia hemisphaerica | exon |
TCONS_00063472-exon-scaffold_39-1491911889:348784..348844 | TCONS_00063472-exon-scaffold_39-1491911889:348784..348844 | Clytia hemisphaerica | exon |
TCONS_00063472-exon-scaffold_39-1491911889:348327..348432 | TCONS_00063472-exon-scaffold_39-1491911889:348327..348432 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_39 | supercontig | scaffold_39:348327..348844 - |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063472 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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