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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063433 ID=TCONS_00063433|Name=TCONS_00063433|organism=Clytia hemisphaerica|type=transcript|length=1270bp
NNATGCTCCAATATACATTGAGATCGGGTTTTGGATTGAAGGATGTTGGT
GTCTGTTATACCCTACAGTAAACAATACTTACCTCTTTGATGTACCTATA
TTTCTGTCGATTGTAGAGGGATTAGCTTAAAATTTTGTATCACAGCTTTA
AAACAGTGTAGATAAACGGTAACGGTTTGGGAGATTTATTAGACGATTTC
TAGCTTTCACGACGACTGAACATGATAGGGTAGATTAAAGCGGTAATATT
CTAAGGTTTCTGGTATCGGTGTCTGTTGGTCATTTTAGGTTAACAACACT
GGTACCATCATTAAATGGGTCAGTCACATGGGCAAAACCACACAAGTTCA
TTACTGAAATCAAAAGAGAGAATATCTAAGCTACTTTCTTTTGAAAGATA
CTTGTAAGGAACTTAATTGCTTAACCAAAATTACTACAGATACCCAAATT
GGTCTGCCTACTGTATCTAGGATCCTATCAATCTCATATTTGTAGGGATA
CCTAGATTTCTGGGGGTTCATAAACCCTTAAAAGGAATACATAGTGTTAA
AGAGTGGATGGTACTGATGACGTAAATGTCAAAACATGTAGAGATCCTCC
GACAGCTGAGCAATAAATGGTCTCGAAAACATGTCTCTTAGCTCAAGGAA
ATTGGTTGGCATCATGAAGACTTCCTaataaattcataaaaaataaatcc
cATTATATACTTGGAATAGATACTCTGGGCGTTTAATAAATCTGTTGGTT
TTTAGGAGCAGTTTTTATTTGAGGGGGCATTTAAATGAAGGGGGATTATT
CTAAATAATCTATAGCCAAGGTCACTCTACAAAGTGAATCAAAGCCTTAG
CTTACCTTTTCGTTATTATTCAAATTCAGATATGCCAATTTAGGTTTGTA
CAAACAGGTCTAATTCGTATCGaagttttcttttgtattccttACAGcca
cttgtttcaaataaacgccccttctaGGAACTGATTATATGGAAAATTAT
CTTTAAATGACTTTGTCGGAATAATAGCAATCATCTCCGTTAGTTTAAGG
TGTAGTTGGCAGATGAAGTTTAGAGAATACTAATACTAAAAAATACTAAT
CAAACTTGGTTAAGGAGTGAATGATAGGAGACCGTCTCAGCTGTTCAAAA
ATAGTCTTTTCTTCCACTCATGAAgccaggggggggtcaacatccagata
ccagacccatagctgggtggtggtgtctttttttcctttaaaagtctgaa
aagtcaagttggtattgatg Run BLAST on NCBI transcript from alignment at scaffold_389:1..1270 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063433 ID=TCONS_00063433|Name=TCONS_00063433|organism=Clytia hemisphaerica|type=transcript|length=1270bp|location=Sequence derived from alignment at scaffold_389:1..1270 (Clytia hemisphaerica)
catcaataccaacttgacttttcagacttttaaaggaaaaaaagacacca
ccacccagctatgggtctggtatctggatgttgacccccccctggcTTCA
TGAGTGGAAGAAAAGACTATTTTTGAACAGCTGAGACGGTCTCCTATCAT
TCACTCCTTAACCAAGTTTGATTAGTATTTTTTAGTATTAGTATTCTCTA
AACTTCATCTGCCAACTACACCTTAAACTAACGGAGATGATTGCTATTAT
TCCGACAAAGTCATTTAAAGATAATTTTCCATATAATCAGTTCCtagaag
gggcgtttatttgaaacaagtggCTGTaaggaatacaaaagaaaacttCG
ATACGAATTAGACCTGTTTGTACAAACCTAAATTGGCATATCTGAATTTG
AATAATAACGAAAAGGTAAGCTAAGGCTTTGATTCACTTTGTAGAGTGAC
CTTGGCTATAGATTATTTAGAATAATCCCCCTTCATTTAAATGCCCCCTC
AAATAAAAACTGCTCCTAAAAACCAACAGATTTATTAAACGCCCAGAGTA
TCTATTCCAAGTATATAATgggatttattttttatgaatttattAGGAAG
TCTTCATGATGCCAACCAATTTCCTTGAGCTAAGAGACATGTTTTCGAGA
CCATTTATTGCTCAGCTGTCGGAGGATCTCTACATGTTTTGACATTTACG
TCATCAGTACCATCCACTCTTTAACACTATGTATTCCTTTTAAGGGTTTA
TGAACCCCCAGAAATCTAGGTATCCCTACAAATATGAGATTGATAGGATC
CTAGATACAGTAGGCAGACCAATTTGGGTATCTGTAGTAATTTTGGTTAA
GCAATTAAGTTCCTTACAAGTATCTTTCAAAAGAAAGTAGCTTAGATATT
CTCTCTTTTGATTTCAGTAATGAACTTGTGTGGTTTTGCCCATGTGACTG
ACCCATTTAATGATGGTACCAGTGTTGTTAACCTAAAATGACCAACAGAC
ACCGATACCAGAAACCTTAGAATATTACCGCTTTAATCTACCCTATCATG
TTCAGTCGTCGTGAAAGCTAGAAATCGTCTAATAAATCTCCCAAACCGTT
ACCGTTTATCTACACTGTTTTAAAGCTGTGATACAAAATTTTAAGCTAAT
CCCTCTACAATCGACAGAAATATAGGTACATCAAAGAGGTAAGTATTGTT
TACTGTAGGGTATAACAGACACCAACATCCTTCAATCCAAAACCCGATCT
CAATGTATATTGGAGCATNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063433-exon-scaffold_389-1491911889:1..1270 | TCONS_00063433-exon-scaffold_389-1491911889:1..1270 | Clytia hemisphaerica | exon |
| TCONS_00063433-exon-scaffold_389-1510915933:1..1270 | TCONS_00063433-exon-scaffold_389-1510915933:1..1270 | Clytia hemisphaerica | exon |
| TCONS_00063433-exon-scaffold_389-1575043694:1..1270 | TCONS_00063433-exon-scaffold_389-1575043694:1..1270 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_389 | supercontig | scaffold_389:1..1270 . |
Blast
The following BLAST results are available for this feature:
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