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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063378 ID=TCONS_00063378|Name=TCONS_00063378|organism=Clytia hemisphaerica|type=transcript|length=990bp
CACTCGAGCAATATTTGCTGTTTAGAAACTCTTTTGAAATGTCTTTTGAC
AGTTCTCTTAAATACATACCGTCTTCCAACAAAAATGACTCAAAAGATAT
GCTGGAAATGACGGGGGAGTTGGTCGTTTAAGTGGGCAAAATGGGGTACG
CTGAGGCTAAAACTGTAGAGGCGCTACTAAAGAAGAAAGGTTAGGTAGAA
GTGTACCTCGAGAGCACACATAGATCAATAAACAAGACCGGGGCACgaat
acaaaagaaattaaagaacAACAACTCAAAGAATCGTTATGCAATAAAAG
GGGCGTGGCATTGCTTTGCAACTGCAGAGGCAACAGTTGCAACACTACAG
GTAAGTTTCAGAAATCACGTGTTTCGTAcccacttttttataagaacagt
aaACCTTAGTAACGCGTaaacattttttcttattttctactATTTCAAAC
AACAGGCTTATTGTTAAAAACCCGCAAGCTCTCCCTAATATTCTTCTCAT
ACAGGTTATCTTACAGAAAACAAAGTTAGACAATTCCACtgataagaaaa
aaatcatttaactcCTGTGAGTCTCGTAGACTAAATGAATGCGAGAGAAA
GTGTAAAAAGTctacatgatttttttagaaTCCAATACCAGCTGTTCGAC
CAACAAaagattttgaagaattgggTCAGCGACAAAAATACCGGCGTCTG
ACACAAGTTCGGGAAAGCGTGACAAGAACGGTGGAGAAGTTTGGCTTTAC
ATCCGCTCAGATCAAATTGAAGACACCATCCGCAACCAAGATAACAGTTT
CTTGCGAGAAAGGTAAAGCATAAACTAGACACTAGCACTACATTCCAAAA
TAGAAGTTCGGTACTGAAAAAATAGAGAAATTGCAGTTTTGtcgtaaata
aaaaatacatttagTTTGAAATAAATACAATTTATATTTAGGATCATCAC
TATGGTCGGAATCTTCCTCACAACAATCGATAAGCCAATC Run BLAST on NCBI transcript from alignment at scaffold_387:95289..96455- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063378 ID=TCONS_00063378|Name=TCONS_00063378|organism=Clytia hemisphaerica|type=transcript|length=1167bp|location=Sequence derived from alignment at scaffold_387:95289..96455- (Clytia hemisphaerica)
CACTCGAGCAATATTTGCTGTTTAGAAACTCTTTTGAAATGTCTTTTGAC
AGTTCTCTTAAATACATACCGTCTTCCAACAAAAATGACTCAAAAGATAT
GCTGGAAATGACGGGGGAGTTGGTCGTTTAAGTGGGCAAAATGGGGTACG
CTGAGGCTAAAACTGTAGAGGCGCTACTAAAGAAGAAAGGTTAGGTAGAA
GTGTACCTCGAGAGCACACATAGATCAATAAACAAGACCGGGGCACGAAT
ACAAAAGAAATTAAAGAACAACAACTCAAAGAATCGTTATGCAATAAAAG
GGGCGTGGCATTGCTTTGCAACTGCAGAGGCAACAGTTGCAACACTACAG
GTAAGTTTCAGAAATCACGTGTTTCGTACCCACTTTTTTATAAGAACAGT
AAACCTTAGTAACGCGTAAACATTTTTTCTTATTTTCTACTATTTCAAAC
AACAGGCTTATTGTTAAAAACCCGCAAGCTCTCCCTAATATTCTTCTCAT
ACAGGTTATCTTACAGAAAACAAAGTTAGACAATTCCACTGATAAGAAAA
AAATCATTTAACTCCTGTGAGTCTCGTAGACTAAATGAATGCGAGAGAAA
GTGTAAAAAGTCTACATGATTTTTTTAGAATCCAATACCAGCTGTTCGAC
CAACAAAAGATTTTGAAGAATTGGGTCAGCGACAAAAATACCGGCGTCTG
ACACAAGTTCGGTAGTTGATATATAATCATATAGTGTTTTACAAATTTTC
TGCCCTGAAAAAAAAGCACTTACTCCATTCCATTACCATAATCAACACCC
TTTCCGTTTTCATGTTTGTACTAAATTTCGACGTCAAGACCTTCGCTGTG
AAAATAAGTAAAAAAAAATATTAGCAATTTTGATTTAGGGAAAGCGTGAC
AAGAACGGTGGAGAAGTTTGGCTTTACATCCGCTCAGATCAAATTGAAGA
CACCATCCGCAACCAAGATAACAGTTTCTTGCGAGAAAGGTAAAGCATAA
ACTAGACACTAGCACTACATTCCAAAATAGAAGTTCGGTACTGAAAAAAT
AGAGAAATTGCAGTTTTGTCGTAAATAAAAAATACATTTAGTTTGAAATA
AATACAATTTATATTTAGGATCATCACTATGGTCGGAATCTTCCTCACAA
CAATCGATAAGCCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063378-exon-scaffold_387-1575043694:95745..96455 | TCONS_00063378-exon-scaffold_387-1575043694:95745..96455 | Clytia hemisphaerica | exon |
| TCONS_00063378-exon-scaffold_387-1575043694:95289..95567 | TCONS_00063378-exon-scaffold_387-1575043694:95289..95567 | Clytia hemisphaerica | exon |
| TCONS_00063378-exon-scaffold_387-1510915933:95745..96455 | TCONS_00063378-exon-scaffold_387-1510915933:95745..96455 | Clytia hemisphaerica | exon |
| TCONS_00063378-exon-scaffold_387-1510915933:95289..95567 | TCONS_00063378-exon-scaffold_387-1510915933:95289..95567 | Clytia hemisphaerica | exon |
| TCONS_00063378-exon-scaffold_387-1491911889:95745..96455 | TCONS_00063378-exon-scaffold_387-1491911889:95745..96455 | Clytia hemisphaerica | exon |
| TCONS_00063378-exon-scaffold_387-1491911889:95289..95567 | TCONS_00063378-exon-scaffold_387-1491911889:95289..95567 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_387 | supercontig | scaffold_387:95289..96455 - |
Blast
The following BLAST results are available for this feature:
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