TCONS_00063359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063359
Unique NameTCONS_00063359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1706

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063359 ID=TCONS_00063359|Name=TCONS_00063359|organism=Clytia hemisphaerica|type=transcript|length=1706bp
CCCCTACTATCAGTTCTTGTTTGGTATTCATGAGACTACTATGGAATTTa
attgttgataattttgcttTACACGCCTCCTTTCCATATCATAAAGAAAA
GTAAAGATATTTTTAGGTTCTTTAGAGTCTAAATCTGAAGGTGTAAGAAT
ATTTGATATTTGTTGTAGATTCTTGGGAGTTGTGTCTATCAATAGGTTTC
TTTTATCTAAATTTTCCATCCAATTTtcaaacaagaaacaaaaatatata
cacAAAAATGGCTGAACAGGATCCTGTCCCTATTGCTAACGAAGAGNATA
TACACAAAAATGGCTGAACAGGAACCTGTCCCTATTGCTAACGAAGAGCC
AGAAGAAACTCCCGGATACAAAGCACCAGCACAGAAATCACTCAATGAAA
TCCAAAACTTAGATGCTGATGATGAATCACTtgtcaaatataaacaaact
ctTTTGGCTGGTGTAGACCCTAATGCAGCACCTAAGGATGACCCTCGACG
TGTTGTTGTGCAAAGTATGAGTTTCATCTCAGGAGATGTCAAAAAGACTT
TGGATTTGACCGGTGATATTAGCAAACTAGCAGAATCAAGCATGGTTGTT
AAAGAAGGAGtagaattcaaaattgaaatcattTTCAAGGTTCAACACGA
GATTATCTCTGGACTGAGATATCATCATGCTGTCCAACGTAAGGGAATAT
CTGTCGACAAACAATCCTTCATGGTGGGAAGTTACGGACCAAAAGCCGAA
TCCTATCAATATTTAACGCCCAGTGACGAAGCACCTAAGGGAATGTTAGC
ACGTGGTAAATACAAGGTCAAAAGTAAATttattgatgatgataaaaatg
tACATTTATCTTGGGAATGGGGAATGGACATTAAAAAGGATTGGGAATAG
ACATTGAAATGAAAGAGTATTTTTtagaactttaaagaaaaaatttaaaa
ccaaatTCACCACTATGTAATGTTTTGGAGAAGGTTTTCACATAGACATA
GACATTGAAATTGAAATCCTTCAACCACCGTTATTGGTCAAAATGTCATT
ATTGTTTAAGATTCAAATCACACACGAAAACTTGGTAGCTTATTAATTTA
TTACAATACATTTTTATAGtataattgaaattttcatttcttaaACCTCA
TCATTTTGTAGCTTATTTTGCATTGTGGATTTTTTGTATACCACACAGCT
ttattctgttttgttttttatagattttatcATCTCCATTTTAAAATGCT
ATCTGAATTTTGCtgcgattttttttcaaacttttgttttgttattaatt
ttcattaatttctaaAACTTGTAGAAACCAAACCTTTTTCTCcattttaa
aatagaaatttaaaacactTTCTTAAatcaatttgttgtttttatcgTGT
TTGATGACAATTTAAAGAGACTCTTCAGTGATAAGAATACTTTATGcgca
caaaatttggaaatctataaaacctcgacagcgtaataaatatcaaattt
tcggtATATAAcgcctttttaaagtcgaagagcaaccgTCTTTAGCGGAT
TtgaggaatatttttcacttttagggCAACTTTTATTCGACAATTCTCAT
TTTTACccaacgattcgcgaaagtttatgctctattctaatatgttttga
aaatattggaaATCTTCTCGgtacagaaaaaatgttttgtaataATAAAA
ATCGCT
Run BLAST on NCBI

protein sequence of TCONS_00063359-protein

>TCONS_00063359-protein ID=TCONS_00063359-protein|Name=TCONS_00063359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MAEQEPVPIANEEPEETPGYKAPAQKSLNEIQNLDADDESLVKYKQTLLA
GVDPNAAPKDDPRRVVVQSMSFISGDVKKTLDLTGDISKLAESSMVVKEG
VEFKIEIIFKVQHEIISGLRYHHAVQRKGISVDKQSFMVGSYGPKAESYQ
YLTPSDEAPKGMLARGKYKVKSKFIDDDKNVHLSWEWGMDIKKDWE
Run BLAST on NCBI

transcript from alignment at scaffold_386:111841..116648-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063359 ID=TCONS_00063359|Name=TCONS_00063359|organism=Clytia hemisphaerica|type=transcript|length=4808bp|location=Sequence derived from alignment at scaffold_386:111841..116648- (Clytia hemisphaerica)
CCCCTACTATCAGTTCTTGTTTGGTATTCATGAGACTACTATGGAATTTA
ATTGTTGATAATTTTGCTTTACACGCCTCCTTTCCATATCATAAAGAAAA
GTAAAGATATTTTTAGGTTCTTTAGAGTCTAAATCTGAAGGTGTAAGAAT
ATTTGATATTTGTTGTAGATTCTTGGGAGTTGTGTCTATCAATAGGTTTC
TTTTATCTAAATTTTCCATCCAATTTTCAAACAAGAAACAAAAATATATA
CACAAAAATGGCTGAACAGGATCCTGTCCCTATTGCTAACGAAGAGNATA
TACACAAAAATGGCTGAACAGGAACCTGTCCCTATTGCTAACGAAGAGCC
AGAAGAAACTCCCGGATACAAAGCACCAGCACAGAAATCACTCAATGAAA
TCCAAAACTTAGATGCTGATGATGAATCACTTGTCAAATATAAACAAACT
CTTTTGGCTGGTGTAGACCCTAATGCAGGTAATGAATGAATTTTCAGGGT
TGTAAATACATTTTATGCTAATGTTTTTTCAAAAATTCTCTATGCATATT
GAAGCCTCTCTCTATACTCTCTTATAATTATATACTGATTAGGTATATAG
ATGATATGACAAAGTAAAATGATGATTTTTGGAATGGTCGAATCTTCCAA
TATAGAAAAACTGTATAATTATGAAAATATTAGTCTTTTTTTAAATTTCG
TTTTTTTATTTTGTTTGGTACTTTTAACACTTCCTAAGTTCCTCGAGGTC
AGTATTCTGATCATCACCATTTATATATTATTGCATATGATGTAATATGA
TTGACAGAAAACAGAGTGTCGTGAAAAATGGAAGAAGATAGCAATATTTT
TGTGTGTTATTGGGTACATGTCATCAAAAGGAAGGGAGAAACACAAAAAT
TCTACTTTTGTATTTGTTTTGATTTTTTTTCTTTCTTTTCCTGGACGTCT
TGTACGGATAACAGAACATTCTTTATCAAGGAATTTTACCTTACCTTAGC
ACCTAAGGATGACCCTCGACGTGTTGTTGTGCAAAGTATGAGTTTCATCT
CAGGAGATGTCAAAAAGACTTTGGATTTGACCGGTATGTTACTATCTATT
AGAATCTTGATTGTATCATATTGATATGCTCAATTATCTTATCGATAATT
TCATTCCAACTCATCTTACAAAACAACAGCTTTTTCATGGTTTCTGCCTA
CTTTTTCAGTCTCCACCTTAACGAAAACTCCCTCCTTAAATCGAACAAAA
ATTACCAGTACAGGGGTAGAGGTTAGAGTGCCCCTCCGCCTTAAAGAAAA
AAACAGTCTCCTTTGATTTTTTTTAATCCCCTTCAGCAAACAATTTTTTA
CAATAGAGAGAGAGGATGCAGATTGTGAGCACGAAAGCAGGAAAAAAGAT
AATATTAGATAAAGAAAATTATTATCAATAAGATCAGAGCCAGAACATTT
GCAATTCAATCAATAATTTTCAAATTTTCCCCCTTTTTTCTTGTTTTGAT
AGATTCTTGCAGCCCTTGATAACCCCCCTTATTTTGAAAAAATACAGTAT
TGTCAAATATTGTTCGTCAATATATTGTGTAGTCTAAGTAACCCTTTAAT
CAAATGATCAAATGTAACGGGTTAATAATATGGATTATTAACCGAAAACC
AGCCTTGTTCGCTTGTATTGGACCCCTTTTGCTCGTTCCAATACGTCGCG
AACTTGGTCGATATTTTGCAAGAGAGACAGGCTTCCGAGGTTAATAATCC
ATTTATAGCCCTGCAAAAATAAAGTAATAAAAGTAATTAACAAGTGTATT
CTATTGTTTTACATCGTAAAAATTGACATTTTAATGATGTCAATTTCATA
ACTGGTCACTATGGGGAAATATTGACCGGCCACGTGACATTAATCATCCA
ATCAGATCCAATCAGTTTTCTTAAAAATGATTGACAGTTGTATTGCAGGG
CTATAAAAGAAATTTACGATTTTGAATTTACCACCGTTGAGCTAAAATTA
TGTATATTTGCGAATAAAGTTTTTATTTTAGTGTTCCTGTTTCATATCAG
GCACATATTTCATATTAGGACAGTGTCTGCCTATTGTTATATTGTGCTGG
TATAAGCAAAAAAATGTTTACACTCTACCTGGCAGTGCTTGGGATTAGAA
CACAGTCTATTGCGGTGCACCAGGCAGGGTGTTAGGAAAATATGGTGATA
GACTCTCTACCTTCACTCGTATATCACTCTCTCAATCCGGCTGATAATTG
AAGTATCAATTGACGTCAAATGAGCTTAGTAAAGTTCAAATTGCAGATGT
AGAACAATAAACTTGGTACACAAAAAAATGTTTTTCTTTTCCTTTTTCTG
ACCAATCTTGCACTGCATACGTGTCAATCCAATGTGAAATAGCTTGTAAA
TTAAAATTGATGAGTACAGTAAGCAAACGATATCACTCTTATTTGAAACT
AAACCTTCAAAGAAAAGGTTTGGATTTGTAGAGACAATAGACCTTGTCGG
AGTTGTGGATTTTTCTAAAAAAACGATGCATTGTGGGATTGTTTCGAGTG
TATTACAATAGAATTCCCTCGAGGAATTCCTAAGAGATTTCTATTGTAAT
ACACTTGAAACAATCCCACAATGCATCACTTTTTTAGAAAAATCAAAAAC
TCTGATAAGGTCTATTGCTTACAAAAATAGAACGTCTTTTTCCATGATGC
GGGAAGCTATGTAACTTTAGTCAACTGGAAAATCTCCATAAAGATTCCTC
TATTGTGTTTAAAAATTGTTGCTGTCTATGCTTTTTTAATCAATTATAGG
TGATATTAGCAAACTAGCAGAATCAAGCATGGTTGTTAAAGAAGGAGTAG
AATTCAAAATTGAAATCATTTTCAAGGTACAGCATATAAAATTTTGTAGA
TGTTTCTATGCCTTATTACTAAAATTCGTAATATATGTTGTAGCTGGTTA
TAGTAATAATATGGTTATTTGGGTGAATTGATAGCCCCAAGGTTAAAAAG
ATGAGAGCGATAATTTTTAACATACAGTGGAACCTCCAATTAGCAGACAC
CATCGGGGGATCGGATTAGGTGTCCGCCTTTTGGAGGGTTTTGATTTTCA
GTACTAGGGGGACGCAAACATGAAATTATGGTTTTAGGCATTTCCCTAAA
GACATATGAACATGAAAAGACTGGAGAAAGGTTATTTAAAAACACAACAA
ACTACTTTATTTCAATCGTTCAAGAAAAGTCTAAAAATACTAAAAATAAG
AAAGTCAACTTCAGGGTTGGGAAAGAGCTTGCACAGGAAAGCAAGTCAAC
TGTGTAAAGGAAAAACTTGTATTTGTAAACAAGATTTGGAGAAAAAAAAC
AAAAATGTCTATGTTTTCCTTGGTGTCCGCTAATTGGAGGGAAAAAAACA
GGTTTTTGAGCATTCCGTGCAAAAATGTTTGTCCGCTAAATGAAGGTGTC
CGCTAATTGAGTGTCTGCCTTTTGGAGACTTTTTTTTTAAGGATTTGACT
AGGAAACGGCCAGGGAAAATATTTTGTCCGCTAATCAGAGGTGTCCGCCT
TTTAGAGTGTCCGCTAATTGGAGGTTCTACTGTATATGTATAAATTAGAG
ATTTTATTTACTTGTGTGTGTAGTGTACATTTTTCATATCTCAGGAGTTT
ATTTAACCTATATCAAAGAATGGTACCACTAAGGCGAATGCATTTCCCAT
TTCAACGTCTCTGATTGAAACCTAAATTCTGTAATTTTTAGGTTCAACAC
GAGATTATCTCTGGACTGAGATATCATCATGCTGTCCAACGTAAGGGAAT
ATCTGTCGACAAACAATCCTTCATGGTGGGAAGTTACGGACCAAAAGCCG
AATCCTATCAATATTTAACGCCCAGTGACGAAGCACCTAAGGGAATGTTA
GCACGTGGTAAATACAAGGTCAAAAGTAAATTTATTGATGATGATAAAAA
TGTACATTTATCTTGGGAATGGGGAATGGACATTAAAAAGGATTGGGAAT
AGACATTGAAATGAAAGAGTATTTTTTAGAACTTTAAAGAAAAAATTTAA
AACCAAATTCACCACTATGTAATGTTTTGGAGAAGGTTTTCACATAGACA
TAGACATTGAAATTGAAATCCTTCAACCACCGTTATTGGTCAAAATGTCA
TTATTGTTTAAGATTCAAATCACACACGAAAACTTGGTAGCTTATTAATT
TATTACAATACATTTTTATAGTATAATTGAAATTTTCATTTCTTAAACCT
CATCATTTTGTAGCTTATTTTGCATTGTGGATTTTTTGTATACCACACAG
CTTTATTCTGTTTTGTTTTTTATAGATTTTATCATCTCCATTTTAAAATG
CTATCTGAATTTTGCTGCGATTTTTTTTCAAACTTTTGTTTTGTTATTAA
TTTTCATTAATTTCTAAAACTTGTAGAAACCAAACCTTTTTCTCCATTTT
AAAATAGAAATTTAAAACACTTTCTTAAATCAATTTGTTGTTTTTATCGT
GTTTGATGACAATTTAAAGAGACTCTTCAGTGATAAGAATACTTTATGCG
CACAAAATTTGGAAATCTATAAAACCTCGACAGCGTAATAAATATCAAAT
TTTCGGTATATAACGCCTTTTTAAAGTCGAAGAGCAACCGTCTTTAGCGG
ATTTGAGGAATATTTTTCACTTTTAGGGCAACTTTTATTCGACAATTCTC
ATTTTTACCCAACGATTCGCGAAAGTTTATGCTCTATTCTAATATGTTTT
GAAAATATTGGAAATCTTCTCGGTACAGAAAAAATGTTTTGTAATAATAA
AAATCGCT

Coding sequence (CDS) from alignment at scaffold_386:111841..116648-

>TCONS_00063359 ID=TCONS_00063359|Name=TCONS_00063359|organism=Clytia hemisphaerica|type=CDS|length=2364bp|location=Sequence derived from alignment at scaffold_386:111841..116648- (Clytia hemisphaerica)
GTTCAACACGAGATTATCTCTGGACTGAGATATCATCATGCTGTCCAACG
TAAGGGAATATCTGTCGACAAACAATCCTTCATGGTGGGAAGTTACGGAC
CAAAAGCCGAATCCTATCAATATTTAACGCCCAGTGACGAAGCACCTAAG
GGAATGTTAGCACGTGGTAAATACAAGGTCAAAAGTAAATTTATTGATGA
TGATAAAAATGTACATTTATCTTGGGAATGGGGAATGGACATTAAAAAGG
ATTGGGAATAGGTGATATTAGCAAACTAGCAGAATCAAGCATGGTTGTTA
AAGAAGGAGTAGAATTCAAAATTGAAATCATTTTCAAGCACCTAAGGATG
ACCCTCGACGTGTTGTTGTGCAAAGTATGAGTTTCATCTCAGGAGATGTC
AAAAAGACTTTGGATTTGACCGATGGCTGAACAGGAACCTGTCCCTATTG
CTAACGAAGAGCCAGAAGAAACTCCCGGATACAAAGCACCAGCACAGAAA
TCACTCAATGAAATCCAAAACTTAGATGCTGATGATGAATCACTTGTCAA
ATATAAACAAACTCTTTTGGCTGGTGTAGACCCTAATGCAGGTTCAACAC
GAGATTATCTCTGGACTGAGATATCATCATGCTGTCCAACGTAAGGGAAT
ATCTGTCGACAAACAATCCTTCATGGTGGGAAGTTACGGACCAAAAGCCG
AATCCTATCAATATTTAACGCCCAGTGACGAAGCACCTAAGGGAATGTTA
GCACGTGGTAAATACAAGGTCAAAAGTAAATTTATTGATGATGATAAAAA
TGTACATTTATCTTGGGAATGGGGAATGGACATTAAAAAGGATTGGGAAT
AGGTGATATTAGCAAACTAGCAGAATCAAGCATGGTTGTTAAAGAAGGAG
TAGAATTCAAAATTGAAATCATTTTCAAGCACCTAAGGATGACCCTCGAC
GTGTTGTTGTGCAAAGTATGAGTTTCATCTCAGGAGATGTCAAAAAGACT
TTGGATTTGACCGATGGCTGAACAGGAACCTGTCCCTATTGCTAACGAAG
AGCCAGAAGAAACTCCCGGATACAAAGCACCAGCACAGAAATCACTCAAT
GAAATCCAAAACTTAGATGCTGATGATGAATCACTTGTCAAATATAAACA
AACTCTTTTGGCTGGTGTAGACCCTAATGCAGGTTCAACACGAGATTATC
TCTGGACTGAGATATCATCATGCTGTCCAACGTAAGGGAATATCTGTCGA
CAAACAATCCTTCATGGTGGGAAGTTACGGACCAAAAGCCGAATCCTATC
AATATTTAACGCCCAGTGACGAAGCACCTAAGGGAATGTTAGCACGTGGT
AAATACAAGGTCAAAAGTAAATTTATTGATGATGATAAAAATGTACATTT
ATCTTGGGAATGGGGAATGGACATTAAAAAGGATTGGGAATAGGTGATAT
TAGCAAACTAGCAGAATCAAGCATGGTTGTTAAAGAAGGAGTAGAATTCA
AAATTGAAATCATTTTCAAGCACCTAAGGATGACCCTCGACGTGTTGTTG
TGCAAAGTATGAGTTTCATCTCAGGAGATGTCAAAAAGACTTTGGATTTG
ACCGATGGCTGAACAGGAACCTGTCCCTATTGCTAACGAAGAGCCAGAAG
AAACTCCCGGATACAAAGCACCAGCACAGAAATCACTCAATGAAATCCAA
AACTTAGATGCTGATGATGAATCACTTGTCAAATATAAACAAACTCTTTT
GGCTGGTGTAGACCCTAATGCAGGTTCAACACGAGATTATCTCTGGACTG
AGATATCATCATGCTGTCCAACGTAAGGGAATATCTGTCGACAAACAATC
CTTCATGGTGGGAAGTTACGGACCAAAAGCCGAATCCTATCAATATTTAA
CGCCCAGTGACGAAGCACCTAAGGGAATGTTAGCACGTGGTAAATACAAG
GTCAAAAGTAAATTTATTGATGATGATAAAAATGTACATTTATCTTGGGA
ATGGGGAATGGACATTAAAAAGGATTGGGAATAGGTGATATTAGCAAACT
AGCAGAATCAAGCATGGTTGTTAAAGAAGGAGTAGAATTCAAAATTGAAA
TCATTTTCAAGCACCTAAGGATGACCCTCGACGTGTTGTTGTGCAAAGTA
TGAGTTTCATCTCAGGAGATGTCAAAAAGACTTTGGATTTGACCGATGGC
TGAACAGGAACCTGTCCCTATTGCTAACGAAGAGCCAGAAGAAACTCCCG
GATACAAAGCACCAGCACAGAAATCACTCAATGAAATCCAAAACTTAGAT
GCTGATGATGAATCACTTGTCAAATATAAACAAACTCTTTTGGCTGGTGT
AGACCCTAATGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039703XLOC_039703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063359-exon-scaffold_386-1575043694:116171..116648TCONS_00063359-exon-scaffold_386-1575043694:116171..116648Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1575043694:115566..115649TCONS_00063359-exon-scaffold_386-1575043694:115566..115649Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1575043694:113773..113849TCONS_00063359-exon-scaffold_386-1575043694:113773..113849Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1575043694:111841..112907TCONS_00063359-exon-scaffold_386-1575043694:111841..112907Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1510915933:116171..116648TCONS_00063359-exon-scaffold_386-1510915933:116171..116648Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1510915933:115566..115649TCONS_00063359-exon-scaffold_386-1510915933:115566..115649Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1510915933:113773..113849TCONS_00063359-exon-scaffold_386-1510915933:113773..113849Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1510915933:111841..112907TCONS_00063359-exon-scaffold_386-1510915933:111841..112907Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1491911889:116171..116648TCONS_00063359-exon-scaffold_386-1491911889:116171..116648Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1491911889:115566..115649TCONS_00063359-exon-scaffold_386-1491911889:115566..115649Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1491911889:113773..113849TCONS_00063359-exon-scaffold_386-1491911889:113773..113849Clytia hemisphaericaexon
TCONS_00063359-exon-scaffold_386-1491911889:111841..112907TCONS_00063359-exon-scaffold_386-1491911889:111841..112907Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063359-proteinTCONS_00063359-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:111841..116648 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
285.208	295.16	299.753	308.898	228.811	178.45	305.442	318.601	274.057	253.136	205.105	206.285	196.697	176.596	262.485	275.442	239.5	233.07	227.411	224.876	157.552	152.95	207.627	192.714	106.222	130.995	237.139	167.619	266.639	228.043
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000406Rho_GDI
IPR024792RhoGDI_domain
IPR014756Ig_E-set
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
Blast
[Close]
BLAST of TCONS_00063359 vs. Swiss-Prot (Human)
Match: GDIR1 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 3.682e-64
Identity = 107/204 (52.45%), Postives = 136/204 (66.67%), Query Frame = 1 
Query:  310 MAEQEP-------VPIANEEPEETPGYKAPAQKSLNEIQNLDADDESLVKYKQTLLAGVDPNAAPKDDPRRVVVQSMSFISGDVKK--TLDLTGDISKLAESSMVVKEGVEFKIEIIFKVQHEIISGLRYHHAVQRKGISVDKQSFMVGSYGPKAESYQYLTPSDEAPKGMLARGKYKVKSKFIDDDKNVHLSWEWGMDIKKDW 894
            MAEQEP       +   NEE E +  YK PAQKS+ EIQ LD DDESL KYK+ LL  V  +A P  +   VVV  ++ +         LDLTGD+    + S V+KEGVE++I+I F+V  EI+SG++Y     RKG+ +DK  +MVGSYGP+AE Y++LTP +EAPKGMLARG Y +KS+F DDDK  HLSWEW + IKKDW
Sbjct:    1 MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADP--NVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202
The following BLAST results are available for this feature:
BLAST of TCONS_00063359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDIR13.682e-6452.45Rho GDP-dissociation inhibitor 1 OS=Homo sapiens G... [more]
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