TCONS_00063359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063359-protein
Unique NameTCONS_00063359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063359-protein ID=TCONS_00063359-protein|Name=TCONS_00063359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MAEQEPVPIANEEPEETPGYKAPAQKSLNEIQNLDADDESLVKYKQTLLA
GVDPNAAPKDDPRRVVVQSMSFISGDVKKTLDLTGDISKLAESSMVVKEG
VEFKIEIIFKVQHEIISGLRYHHAVQRKGISVDKQSFMVGSYGPKAESYQ
YLTPSDEAPKGMLARGKYKVKSKFIDDDKNVHLSWEWGMDIKKDWE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039703XLOC_039703Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063359TCONS_00063359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000406Rho_GDI
IPR024792RhoGDI_domain
IPR014756Ig_E-set
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPRINTSPR00492RHOGDIcoord: 132..147
score: 71.88
coord: 69..87
score: 32.46
coord: 148..160
score: 55.13
coord: 115..131
score: 41.18
coord: 174..191
score: 62.96
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 11..194
e-value: 9.8E-66
score: 221.1
IPR024792Rho GDP-dissociation inhibitor domainGENE3D2.70.50.30coord: 19..196
e-value: 1.2E-69
score: 233.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 10..196

Blast
[Close]
BLAST of TCONS_00063359-protein vs. Swiss-Prot (Human)
Match: GDIR1 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 5.022e-70
Identity = 107/204 (52.45%), Postives = 136/204 (66.67%), Query Frame = 0 
Query:    1 MAEQEP-------VPIANEEPEETPGYKAPAQKSLNEIQNLDADDESLVKYKQTLLAGVDPNAAPKDDPRRVVVQSMSFISGDVKK--TLDLTGDISKLAESSMVVKEGVEFKIEIIFKVQHEIISGLRYHHAVQRKGISVDKQSFMVGSYGPKAESYQYLTPSDEAPKGMLARGKYKVKSKFIDDDKNVHLSWEWGMDIKKDW 195
            MAEQEP       +   NEE E +  YK PAQKS+ EIQ LD DDESL KYK+ LL  V  +A P  +   VVV  ++ +         LDLTGD+    + S V+KEGVE++I+I F+V  EI+SG++Y     RKG+ +DK  +MVGSYGP+AE Y++LTP +EAPKGMLARG Y +KS+F DDDK  HLSWEW + IKKDW
Sbjct:    1 MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADP--NVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202
The following BLAST results are available for this feature:
BLAST of TCONS_00063359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDIR15.022e-7052.45Rho GDP-dissociation inhibitor 1 OS=Homo sapiens G... [more]
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