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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063168 ID=TCONS_00063168|Name=TCONS_00063168|organism=Clytia hemisphaerica|type=transcript|length=857bp
CTTATGTCTTTACCAATAGGTAGTTTATCCTCAGTTTCAAAATTAGGTAA
AGCGTCTTGCCTGCAGAGTTTACAGAGCCAGgtgttttttataaattttg
gtTCAACGTCGAGGCACTTTGCATGGGATCGTCCCTcacatttttgacaa
aaatgaaaaatttgagtggttctagagattttttttaGGCAAACAGTGCA
CTTCGCACTTTGCATGCTTGAAGAATTGTTAATCTTGTGTCTCAAAGTTC
AAAGGGATATATTTCCCGAGCCAAAACTAATGTCATATAATATCAATAAA
AGAATACTCTATCACAATAGAAAGAAATGCGTAACAAAAATCAGGGAATT
ATCTACTTTTTAAGAATAGAAAATGTCTTTATAATCAGGAAAAGATTCAA
TCAAGTCATTCAGATGTGTTACTTTCATTACTTCATTGTTATTGTCAGCA
AAACGCACGTTAATTGTCCCATTAAAGACCCAAAAAGACTCAATTGCATT
CTTATTATAGAGTGATTTCACTCTTCCCCAAAGATATCGATAATAACTGC
AAAGGTTATTGTTAATATACAACGTGTTAGAAAGATTCACTTTTGACAAA
ACTTCTCTCTTTTTGAATTCCTTTccttttttgatgaatttttctgCAAA
TTTTCTGTTTACGAATCTGACAATAGTACGTTTTGGTccgttttgatttt
tgttttgagtgagTCGATGACAGGCTTCAATATCATGTGAAGAGATTGTA
ATGTCAACAGCTTTAGCGACTTCGATAACTTTTGCCTCTAGATCCTGTTG
TTTAACGTAATCAGGGATACCAGCTATTTCAATGTTATTTCGTCTTGTAT
ATTGATA Run BLAST on NCBI protein sequence of TCONS_00063168-protein >TCONS_00063168-protein ID=TCONS_00063168-protein|Name=TCONS_00063168-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
YQYTRRNNIEIAGIPDYVKQQDLEAKVIEVAKAVDITISSHDIEACHRLT
QNKNQNGPKRTIVRFVNRKFAEKFIKKGKEFKKREVLSKVNLSNTLYINN
NLCSYYRYLWGRVKSLYNKNAIESFWVFNGTINVRFADNNNEVMKVTHLN
DLIESFPDYKDIFYS Run BLAST on NCBI transcript from alignment at scaffold_383:94935..95791 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063168 ID=TCONS_00063168|Name=TCONS_00063168|organism=Clytia hemisphaerica|type=transcript|length=857bp|location=Sequence derived from alignment at scaffold_383:94935..95791 (Clytia hemisphaerica)
TATCAATATACAAGACGAAATAACATTGAAATAGCTGGTATCCCTGATTA
CGTTAAACAACAGGATCTAGAGGCAAAAGTTATCGAAGTCGCTAAAGCTG
TTGACATTACAATCTCTTCACATGATATTGAAGCCTGTCATCGActcact
caaaacaaaaatcaaaacggACCAAAACGTACTATTGTCAGATTCGTAAA
CAGAAAATTTGcagaaaaattcatcaaaaaaggAAAGGAATTCAAAAAGA
GAGAAGTTTTGTCAAAAGTGAATCTTTCTAACACGTTGTATATTAACAAT
AACCTTTGCAGTTATTATCGATATCTTTGGGGAAGAGTGAAATCACTCTA
TAATAAGAATGCAATTGAGTCTTTTTGGGTCTTTAATGGGACAATTAACG
TGCGTTTTGCTGACAATAACAATGAAGTAATGAAAGTAACACATCTGAAT
GACTTGATTGAATCTTTTCCTGATTATAAAGACATTTTCTATTCTTAAAA
AGTAGATAATTCCCTGATTTTTGTTACGCATTTCTTTCTATTGTGATAGA
GTATTCTTTTATTGATATTATATGACATTAGTTTTGGCTCGGGAAATATA
TCCCTTTGAACTTTGAGACACAAGATTAACAATTCTTCAAGCATGCAAAG
TGCGAAGTGCACTGTTTGCCtaaaaaaaatctctagaaccactcaaattt
ttcatttttgtcaaaaatgtgAGGGACGATCCCATGCAAAGTGCCTCGAC
GTTGAaccaaaatttataaaaaacacCTGGCTCTGTAAACTCTGCAGGCA
AGACGCTTTACCTAATTTTGAAACTGAGGATAAACTACCTATTGGTAAAG
ACATAAG Coding sequence (CDS) from alignment at scaffold_383:94935..95791 >TCONS_00063168 ID=TCONS_00063168|Name=TCONS_00063168|organism=Clytia hemisphaerica|type=CDS|length=498bp|location=Sequence derived from alignment at scaffold_383:94935..95791 (Clytia hemisphaerica)
TATCAATATACAAGACGAAATAACATTGAAATAGCTGGTATCCCTGATTA
CGTTAAACAACAGGATCTAGAGGCAAAAGTTATCGAAGTCGCTAAAGCTG
TTGACATTACAATCTCTTCACATGATATTGAAGCCTGTCATCGActcact
caaaacaaaaatcaaaacggACCAAAACGTACTATTGTCAGATTCGTAAA
CAGAAAATTTGcagaaaaattcatcaaaaaaggAAAGGAATTCAAAAAGA
GAGAAGTTTTGTCAAAAGTGAATCTTTCTAACACGTTGTATATTAACAAT
AACCTTTGCAGTTATTATCGATATCTTTGGGGAAGAGTGAAATCACTCTA
TAATAAGAATGCAATTGAGTCTTTTTGGGTCTTTAATGGGACAATTAACG
TGCGTTTTGCTGACAATAACAATGAAGTAATGAAAGTAACACATCTGAAT
GACTTGATTGAATCTTTTCCTGATTATAAAGACATTTTCTATTCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063168-exon-scaffold_383-1491911889:94935..95791 | TCONS_00063168-exon-scaffold_383-1491911889:94935..95791 | Clytia hemisphaerica | exon |
| TCONS_00063168-exon-scaffold_383-1510915933:94935..95791 | TCONS_00063168-exon-scaffold_383-1510915933:94935..95791 | Clytia hemisphaerica | exon |
| TCONS_00063168-exon-scaffold_383-1575043694:94935..95791 | TCONS_00063168-exon-scaffold_383-1575043694:94935..95791 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_383 | supercontig | scaffold_383:94935..95791 . |
Blast
The following BLAST results are available for this feature:
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