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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063035 ID=TCONS_00063035|Name=TCONS_00063035|organism=Clytia hemisphaerica|type=transcript|length=1267bp
gttttttttataagcaagtgtatgccccttggtcaggctcgtgtatgctt
aagttctcaaagcatccaggcatagcttatgcttattatatgcttacgaa
tcatgcttatgatttaCCCCGAGCCcaacagataaaaaatgaaagtttga
aaaatatctcaGGCTGACATAATATGCTCATGCTTATGAATTCTGctaat
ctgagccttcatatgcttataagcgttatgcttattaaaaaaaacattgt
aCGCAAGTTTGTTCGAGTAGTATCGCTGTGTTTATTAACGATAAGTTTTT
GAGCTACAAAACAATCTGCAAGAGTGCGTAAGACAGAACGACCTTAATTT
TCATTTAGAATACTTTGGAATATAAAATGGTGATCTTAAAATGTTGTCTC
TCATAGGTTAAAGTGGAGAATAGTTTATGCGAAGAAATCATCAAATGCAA
GGAAATGATACCAACGCCAAATTTGAATTCCCCTACAAGCAGTTATCAGA
ACAATGAGAATGTCTCTGAAGATGATCTGCAGTTACGGTTAATACACGAA
CTAATACAAGGCAGCATACAGAGGTGTCGATGCAGCACAGAACAACTAGA
AGAAGCTAAATCTACCATGTTTAAGctTCTTGACCATAAACCTAAGGCGA
TGGAAACATTGAAGAAATACAGTaggccaaaattaaaatctaaaaagaaa
TCATCATGACGATTAGCCAAAGCGAAGTGAGATGGTGATTTGTCTCCATG
GCATCCCTTGGATGTCGTCACTTTTGCTCTATGGAAGTACTTCATTGCTG
GTCTTTGAGGGTTTGTTCGGTCTTCTACTCTGATAAAAATAATCCACCGT
CTATTATTATATTTtcatgtatctattttttttaatccgttattcccttt
ttttttctctatgtacatatgtaaacaaactgaGAAAAAGGGGGACATTT
TTTGGAATAGAAAAACTACCGCTACACACAATTTTTGGATTCTCTTACCC
GATGAAAAGccattcttttttttcaaacaaggCAAGTGTTGTTTTTAATG
gctacatattttttttaaaagattatatatgttttaaaatattttataag
gttgagttctttaaaagaaaaatccttAATCGATCATAGCAACATTGTAA
AAAGGCAAATTTTTATCTTGTCGTATTTTTGGTAGCTGAAATCGAAAGCC
AAATTTCTCCATAACTTACTTAGTAATAGTAATATTATTGCTGTATATAT
GTGtaggaaaataagaa Run BLAST on NCBI transcript from alignment at scaffold_377:23310..24817- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063035 ID=TCONS_00063035|Name=TCONS_00063035|organism=Clytia hemisphaerica|type=transcript|length=1508bp|location=Sequence derived from alignment at scaffold_377:23310..24817- (Clytia hemisphaerica)
GTTTTTTTTATAAGCAAGTGTATGCCCCTTGGTCAGGCTCGTGTATGCTT
AAGTTCTCAAAGCATCCAGGCATAGCTTATGCTTATTATATGCTTACGAA
TCATGCTTATGATTTACCCCGAGCCCAACAGATAAAAAATGAAAGTTTGA
AAAATATCTCAGGCTGACATAATATGCTCATGCTTATGAATTCTGCTAAT
CTGAGCCTTCATATGCTTATAAGCGTTATGCTTATTAAAAAAAACATTGT
ACGCAAGTTTGTTCGAGTAGTATCGCTGTGTTTATTAACGATAAGTTTTT
GAGCTACAAAACAATCTGCAAGAGTGCGTAAGACAGAACGACCTTAATTT
TCATTTAGAATACTTTGGAATATAAAATGGTGATCTTAAAATGTTGTCTC
TCATAGGTTAAAGTGGAGAATAGTTTATGCGAAGAAATCATCAAATGCAA
GGAAATGATACCAACGCCAAATTTGAATTCCCCTACAAGCAGTTATCAGA
ACAATGAGAATGTCTCTGAAGATGATCTGCAGTTACGGTTAATACACGAA
CTAATACAAGGCAGCATACAGAGGTGTCGATGCAGCACAGAACAACTAGA
AGAAGCTAAATCTACCATGTTTAAGGTATTATATCTTCAATTTTTGAAGT
CTTGGGTTTAGACTGTTCTTTTTTTTTTTCTCCAGTTTTTGACCCAGTTT
CAGCGTCTTGCATTTCCAAACCTGTTTAGATTTTTACCAACTGAGGCCAG
AGTAGAAATTGTCTATGCTTGTATCTAATAACAATATATCAACCCTCTTT
CTATTCATTGTCTTGTTTATGCAGACTCGCTATTAAATAAGTTAATTGAT
TTCAATTTTTTTATAGCTTCTTGACCATAAACCTAAGGCGATGGAAACAT
TGAAGAAATACAGTAGGCCAAAATTAAAATCTAAAAAGAAATCATCATGA
CGATTAGCCAAAGCGAAGTGAGATGGTGATTTGTCTCCATGGCATCCCTT
GGATGTCGTCACTTTTGCTCTATGGAAGTACTTCATTGCTGGTCTTTGAG
GGTTTGTTCGGTCTTCTACTCTGATAAAAATAATCCACCGTCTATTATTA
TATTTTCATGTATCTATTTTTTTTAATCCGTTATTCCCTTTTTTTTTCTC
TATGTACATATGTAAACAAACTGAGAAAAAGGGGGACATTTTTTGGAATA
GAAAAACTACCGCTACACACAATTTTTGGATTCTCTTACCCGATGAAAAG
CCATTCTTTTTTTTCAAACAAGGCAAGTGTTGTTTTTAATGGCTACATAT
TTTTTTTAAAAGATTATATATGTTTTAAAATATTTTATAAGGTTGAGTTC
TTTAAAAGAAAAATCCTTAATCGATCATAGCAACATTGTAAAAAGGCAAA
TTTTTATCTTGTCGTATTTTTGGTAGCTGAAATCGAAAGCCAAATTTCTC
CATAACTTACTTAGTAATAGTAATATTATTGCTGTATATATGTGTAGGAA
AATAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063035-exon-scaffold_377-1575043694:24193..24817 | TCONS_00063035-exon-scaffold_377-1575043694:24193..24817 | Clytia hemisphaerica | exon |
| TCONS_00063035-exon-scaffold_377-1575043694:23310..23951 | TCONS_00063035-exon-scaffold_377-1575043694:23310..23951 | Clytia hemisphaerica | exon |
| TCONS_00063035-exon-scaffold_377-1510915933:24193..24817 | TCONS_00063035-exon-scaffold_377-1510915933:24193..24817 | Clytia hemisphaerica | exon |
| TCONS_00063035-exon-scaffold_377-1510915933:23310..23951 | TCONS_00063035-exon-scaffold_377-1510915933:23310..23951 | Clytia hemisphaerica | exon |
| TCONS_00063035-exon-scaffold_377-1491911889:24193..24817 | TCONS_00063035-exon-scaffold_377-1491911889:24193..24817 | Clytia hemisphaerica | exon |
| TCONS_00063035-exon-scaffold_377-1491911889:23310..23951 | TCONS_00063035-exon-scaffold_377-1491911889:23310..23951 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_377 | supercontig | scaffold_377:23310..24817 - |
Blast
The following BLAST results are available for this feature:
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