TCONS_00063004 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063004
Unique NameTCONS_00063004
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063004 ID=TCONS_00063004|Name=TCONS_00063004|organism=Clytia hemisphaerica|type=transcript|length=154bp
ATCTGTGCTGGGACCGCTATTGTTCCTGATCATGATTCAAGATATCGATG
ACAACATCCTTCATTCTATTTTGGCATCGTTTGCTGACGACACTCGTTTG
ATGAAAGAAATATCCAAACTGGAGGATGTTTATCATCTACAAAATGATCT
AGAC
Run BLAST on NCBI

transcript from alignment at scaffold_375:294315..294468

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063004 ID=TCONS_00063004|Name=TCONS_00063004|organism=Clytia hemisphaerica|type=transcript|length=154bp|location=Sequence derived from alignment at scaffold_375:294315..294468 (Clytia hemisphaerica)
GTCTAGATCATTTTGTAGATGATAAACATCCTCCAGTTTGGATATTTCTT
TCATCAAACGAGTGTCGTCAGCAAACGATGCCAAAATAGAATGAAGGATG
TTGTCATCGATATCTTGAATCATGATCAGGAACAATAGCGGTCCCAGCAC
AGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039464XLOC_039464Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063004-exon-scaffold_375-1491911889:294315..294468TCONS_00063004-exon-scaffold_375-1491911889:294315..294468Clytia hemisphaericaexon
TCONS_00063004-exon-scaffold_375-1510915933:294315..294468TCONS_00063004-exon-scaffold_375-1510915933:294315..294468Clytia hemisphaericaexon
TCONS_00063004-exon-scaffold_375-1575043694:294315..294468TCONS_00063004-exon-scaffold_375-1575043694:294315..294468Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:294315..294468 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063004 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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