TCONS_00062969 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062969
Unique NameTCONS_00062969
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1198

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062969 ID=TCONS_00062969|Name=TCONS_00062969|organism=Clytia hemisphaerica|type=transcript|length=1198bp
TCAAGTGAGGACTACAATGTGGCTTGTATCCTTACCCTTCCTTCTTATCA
ACGAATGGGGTATGGGAAAGTGCTCATCGAATTCAGTTACGAGCTATCAA
AATTCGAAGGGAAGACGGGACATCCTGAAAAACCGTTATCAGACTTGGGA
CTGTTATCATACCGATCATATTGGTCACAAACCATCTTAGAAATCCTTCT
TCAATTGAAAAGTGAAGAAGGAACAAACCCTATAATAACTATAAAtgaaa
tATGTGAGATGACGAGTATACGAAAAGAAGATGTGATCTCCACACTCCAA
CATTTGAATTTATTACAGTATTATAAAGGACAATATGTGATCTGTATAAC
AAAGGAGATTCTTGAGTCACACTCAAAAGGAATGAAAAAACGCAAAATAA
GAATCGATCCTAAATGCTTGCATTGGCAACCGAAAGACTGGGCCAAACGT
GGTAAATGGTAAGGCTGACGAGTGAGAATGGTGATATTATTTGGTCAGTT
GATGGATTGAATTTAAGTAAaacacctctgtctcacagctccggtggaac
ttttttcctcagtggggattaAAACTTCTATCGAAATTCCaaaggggata
gaaattctattgtaccaaggtaaaaaaatccagtgggatggttttggagt
gcaatttagGGATGAAATGAAAGTCTATTCCCCAGTGGGCTGAAATTCCa
cggtattttcccaccggggacgacttttttgccaaattttccagtggggc
tggggtcccagcgggtctgtgagaaggtgtAGAAATGAGTCGAAGAAGTA
AAACAAAAGTAAATGATTTCATTACTTTACATTAATTTTAAGTAGCTCTA
GTAAATCTGAGCACAAGAGTGTTTCAAAATATCGAGAACGAAGGGTCCTT
ATCATATAGCACTATGAAAAGCTATGAAAATGCTTGTCCAAATTTCCGAC
TATATCCATTGTTAAGGCGAGCCATGACCCCAAAGACGTTTGTATACAAA
TCAGCAGTGAAGGCTTCATCATAACATTAGGTTCCTCTTCTAAGAGTACA
AGTACTTTATTATTTCTTTGCTTCCAGTGTTATCTTTAGAAAACATTTAT
ATTTTGCCCATCTGTACCTTATAATAGTATTTGAAATTGTATTTTGTAAA
TATATTAGATGATTCCTATTACGATTTAAAAACATTGTCAAATTTGTG
Run BLAST on NCBI

protein sequence of TCONS_00062969-protein

>TCONS_00062969-protein ID=TCONS_00062969-protein|Name=TCONS_00062969-protein|organism=Clytia hemisphaerica|type=polypeptide|length=153bp
SSEDYNVACILTLPSYQRMGYGKVLIEFSYELSKFEGKTGHPEKPLSDLG
LLSYRSYWSQTILEILLQLKSEEGTNPIITINEICEMTSIRKEDVISTLQ
HLNLLQYYKGQYVICITKEILESHSKGMKKRKIRIDPKCLHWQPKDWAKR
GKW
Run BLAST on NCBI

transcript from alignment at scaffold_375:352371..361852+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062969 ID=TCONS_00062969|Name=TCONS_00062969|organism=Clytia hemisphaerica|type=transcript|length=9482bp|location=Sequence derived from alignment at scaffold_375:352371..361852+ (Clytia hemisphaerica)
TCAAGTGAGGACTACAATGTGGCTTGTATCCTTACCCTTCCTTCTTATCA ACGAATGGGGTATGGGAAAGTGCTCATCGAATTCAGTAAGTTTCGTGTTA CTGTCTGAAGCTTGTTTCTTATCATCGTAATTGTTATATTTTTGGTATTA CGCgtttttataaggaactttaACTTGGCTCGGAGTCTTATTTTTTCCTG AGAATCTCAGCCTCAAAACTCCTCCTTATTTACTTAACTGCTAAGACATT GATTGAATGTTGTTTCGTTgatattttatcatatttttgtaTAGGTGTTT GTAAATGTGTGCAAGTTTAAATTTAGCCCTTACCGttctttaacttgatt tttggacctacctcggaggttctttaaattaaccgatgttcgtccgtttg tctgttaccagttttttttcatcattatttttttctattttttttttttg ctcaaagatgcgtattagcaatgttcaaaacatggccgagtccgattttt gagaattttttttttccggccgaaaatgccggaaatatgccggaactGGC TTTTATTGGActtttttctaatatttctttgtttttttcgcaCAAAAACA TAATTGATAACAATACCCACCaccaagcatgattcaattgtcaataaaac tgatttttgcaaccgaaactttctatttcttttttcactgCTCCTGTTCC CTCTCCCCCCGCTCCCCCCGCTCCCCCCTTTCCCATCAACaataaatgat gaaatttaatgcgttatggaTTTTTGCTAAACggtatattttctgactga atattttcatttttctccttattgctttTGCTTGATGTAATAATCATTTT CTTAGCATCATTCTATCGAAAGTAGCGAGCCTTTAGTTTTATACTTTTAT ATCTTTACTTTGATTTTCCGTTTGTTTTCATGGTCATCCATCATTGGCCA TTTTATTTCTAGAAGTTATGTGTGTGAAAATCAGTTTTTCTAACTCAGAC GAATTAGTCtgtcttttttaatttgaatttttttgactatttttagtaaa tgttggatttgataaaaaaagtgaaaactaaaaatttaattttattcatt gtttgacgtttcggtgtcttctttgcaccatgatcacaagtatagtaaaa aaaattcaaaacgaatttcaatttacaacattaaaaaaaaaatcacaaaa ttaaaaaattactaccaGGTTGTTAAATTTCACAAAGGAACGCATACATC CTAAAAGAGCTCAAGGGGGAATGAAGagtttttttgagtttcaacCCGTC ACTTAGGATCAAGTCGTCAAAGAGATAAAGAATCTTCGAAGTGACTGCTC TGCCGGGTATGACAATCTACCAGTATCGCTGATCAAACCTATCGCCGACC ATCTAGCGTCACCACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTCAAACCACTTTCCATCAGC AATGGAAAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAA CTGAACAGTCCGTCACTCCTGACCAATTCAGACCCGTCACTGTTTTGCCT ATCTTATCAAAACTTTACGAACGTTTAATGGCAAAGCAGATCGTCAAGTA CATCGAAAGAAACCAGATATATCAACAAACCATGTCTGGTTTCCGTAAGC GTCATTCTACCGAAACGCTCCTAATGAAGATACGAGACGACATCATTGGT GCGATGAACAAAAGCGAAGTCACACTAGCCGCCTTTCTTGATTATTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGA ACACTGTAAGACAGTAAACCTCCCAGCTTCAATCGTCAACTTAACACATC GTTTAAACCAACTTAGAGAATGGTCAAGCACTAATAATCTGGCgttaaac aacaaaaaaaccaaAATCATGCTACTGTCAACACTGAGAATGTCAAACCT TCACGATTTCATGAACCCCGATCACGCAACCTTTCGTATCTATCACACAG ACCAACTGATAGAACGATTTATCGTTTATAAACTTCTTGGCATCCAATTC GATCAAAATCTAAATTGGCAAACTTATATCGATAAACTCGGTCAATGCGG AAACAACTGGCCGAAGCCCTTCTTATATCGAAGTTACACTACTGTTGTTC ATTGTTCTGGAACCTGCCACAAATCCAGTTGAAAAAACTTGATAAACTGC TATGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNact agggttggtgaatgaggggtatgtgcggacaggacctccgaaaaccgacc cttagagagaccaaattttagtgaaaaggtgacccttagagagacttttt cgaaaaattttctgtgattttcaaaaattccctacccttagtgagacttt tttgtaattttctctctcaaaatcaaattttttttccagaaatcgtgatt tttcccacccttagagagactactttgaaatttcctgatttttgtaaccc ttagagagactttgaaaggtgaaaaacccgacccttaccgNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGAGACT AATGTATCGGAAAAATTATTTGTTGGCAAGGCAAGTCGCCTTTTGAATGA TATTCCAAAAGCGATCAGGGAAGAACCTGATCACAAAAAAATTcgcaata tttaaaaaaagtatttattagATCGTAGTCTGGCAATATTTTATACACAT TATATCTAATTTTTTATTGTAGATTCTATGATCATGAGGTCTAGTGGTTA TATTATTAATATTTACCTTACAatatttacttgatattttagtCTGGTGG TCTGATCAACACTGAAATTTTCGCAGGATTAGCCACTCAATACTACTACA ACTCAACcgaacttttcctaatttaacCACTACAACACCAACAAGCTATA CTTTCTGTTTTATAATCTGTAATTTTGTAAGCTCTGTCAGTATTCTtgag ttgttgtttttttgtgtgttttgtttctacagcatatttttttcatagaa tataattatctttttatttaaatatgattatttttacataCGACGAATAG CCTTTGTAAAATATGGAAGAGCCTGAAAGaccattaataaaaaaaaaaaa ataaaaaaaaatgaagagacATGCTCATTCAATCCAACAGTTCAATGTTG GATTCTTAAGATTAACCTACTCTAATAAGACATAGCATATTTGATTCATA TTGGCATTTCAGATAGCATTTGAGTTGGTAATATTTTGCTTTGTCTTCAT TTTCAGGTTACGAGCTATCAAAATTCGAAGGGAAGACGGGACATCCTGAA AAACCGTTATCAGACTTGGGACTGTTATCATACCGATCATATTGGTCACA AACCATCTTAGAAATCCTTCTTCAATTGAAAAGTGAAGAAGGAACAAACC CTATAATAACTATAAAGTAAGAATTTTCTTCCAATAAGATGTTGTTTAGA TAACATACTTTTGTGGGGTTCTTTTGATAATTAGGTAGAAATAGGCTACG TTACAtattccttcgtttcgagcgtaaaactcctactcttcgggatatgc gcactgctcttcttttgaaaagtgatttttttaaatttacatTGCATGCG CACTAACGTTTTATTGAAACAATATAGTGTTTATTCGGAGCCTTACCCAA TCAGCcatgttttaaatattctttcattTGATATCAGGGGGTACATTCGC AAGGTACTAACCCTGATTATCAGACAAATTTGTCTTTGGTACTATCCTCT TTTTAGTACCTGGTGTTAACTTTTTCTgaggaaaaaaagggaaaacacAC CCTCCCCCAATCCCAATTCCCCAATCAGATACTGGTTACCGAGGAAAATA ATGGCTACATAACCTTGTTATACATAGCAGTCAATTTCACCTCACCAAAG TGTCGGAAGTTCTCAAAATCTGGAAATTCATTTCTGGCAattcgattttt caaaattatttaaaaaaatatgaaaatcaaaaaatatgtcCCTTAAATGA AATCTGTTTTTCGTCtggaaatttttcggaaaattgacaaaattcttttc tgATTTGCCAAAATTGATCATTAACCCATTTTATCCATTTTACCAAAGAT TAGTGTACCAGGTCAGGGACtctttggacctaccccggtggaggtcctat aaatccgtccgtccgttcgttaccaacttttctcgagattggctcattag tttttttctgattttttgcacaaagatgtgtaactcgaatgtgacagagc ccgattttcaaaaaaaaaattttgggcaaatttgggccaaaaaacgccta aaaaacgggttttttggactttgtgaaaaattggatcattaattttttct gattttttgcatgaaagtagggtaccatcatagataaaagatggctcaag cagattcttgcaaaaaaatttagttggctcaaaaaacgcaagtttattta taagaatcactattaataagcatacatcaatgttcttagtcaaattactt aatttttttatgagatagatgttttttttgctcatgagggcttacttttg aaaaatatgtgtgtttagacatgaaactttagttgcttggcgtgttttta tagaaaaactggccaagttcgatatttttttataagcacatcatcaatta cttaggtattagcttttctcgagattggctctttcattctttatgatttt tttcaaatgtgacggagctcgattgggctcttccagaaaaaatttttaca tggggggtggaggatatattgtccgggggtgtaaatttaaatttggtgTG CCTGGGGGTAATTTGGTGTGTCCGGGGGGTCggcagatgcttgtccgggg gtaaaacctattgtccggggggccaaaagtcaccctgtccggggggtaaa tcactaaaaattgttatatcctccacccaacaaaattgatttcaatgttt tttttcttacttttttttcatcgaacgttttaattgcattcgaaatttat tttgtgagaaagaaaatcaataaacaacaataaatgaaagacataaagag aagagaaaaatatgtAACTCTCaatgtaatttctgtaattttctttccta actgggaaaaagtagtgaaagccatcgtgcgattagctcgtaatcacata ataactcgtacaattcgaaaattgcaattatattcgaattgcactcgtta ttaTGTGATATGCATTACCAGGTAGTTCCataaagtatcacttgtttaat aTGTCCGTATAacggccaaaatactcaatctAAGATTGAGTTTTTGAAAC ACAGGACCCCCAGCTACATCAATGTACAGCTTTGCTGAGAACGTTCCCTT TCAGGCATATTAAAAATTCAAAGTCCCAGATCGTGTCTTATCTTTTAGTT ACAAGTTACTAAGTTACAATGAATAAAGAGAATGACTTCAGATTTATTAT ACTAGAGTGAAAAAATATTAGTTTGAATAAAATATAACAGTGTTCTTAAG TTTTCCTTACCATATCCTATCTTGAAATAAGTCGCCTAACATGCTAGACA AATAAtatagaaaagtaaaaatatctCAGAACTAAATGTCAATgtgaata aaaatttaattagctttttttcTTGGTGAAATTCCGGTTTTGCTTAGCTC TTTGGACAaacttttgatttcaatttcaattttgacgggATTAATGATGC GGGGTGGATCAATATCATCAAAGATATCAATCAAATCACCCCCTTGCTTT TTTCTTTCCTCCACTTTTTTCTGTATTTCGTCTATATGAGCCTGAGTTGT TAAAACCCACTCAGTAGGGACAGGTAGTTTCAACTTAGATATCTCATCTT TTGGTACTGCTTCCCCATATTTTTCTCGTATTTCGTTCTCTTTGTCAAAG AAAGATGTTGTGTCTACACATCCGATCGGAAAAAGAtttaaaacttttgg ttttggttCGAAATCCTTTTTAGATTCTTTTATAATCCGTTGTTCAACCT GCTCCATCCGgttatttgtttctttttttaccGATCGATGGGTAAATCCA ACTTTCACCAACCTAGTTTTCACATTTTCCCCATAGGGAGAGGTCAACCC ATGTTCATTATTCAAAACGATCGCATAAATAACAGGGCCCTTATTTTCTC TGCGGATACGGTCTTCTATCTCCTTTTTCTGAGCATACTTGTTCAGCTCC TTGATCAATTCGCTACCATTAGAACCTTCCCAAAATTTTCGTTTGAAATC ATCTAAGTTATCGATTTCTTTAAAATCCAACGATGCCATATTACGTAGTG TTTGTCCTTCTGTCCAGTTCTAAATGTCAGAATCTATCACTACCAGATTT CCCTCTTTTAAAGTCAATGTTTTCTATTTACTGTCAATTTTGTTGCCAGC TGTTAATATAAGTAATGAACAGTCAATGCAAAATATTGACTGTTAATATT GACGTTCATTATATTCTATTAgctttcaagaaaatgttttataaATTGCT GCGTTAAATCTATAAGAAATCTTTTTAACTGTCTTATTCGTTTTCAAATT AATAGGTCCATTAATTTCTATAAAACTTTTCACTTGTCTCAGCTCatctt ttcttaaatttcttaaatagtctttctttgatttttcttagCTTTGAAAA CTAATCTGTAAAGTCTAGAAGTATTTTCGGAGTATCCATATAAAAGTATT AATCCATACTCAAATCATAATATCCTCGAAGTATTAATAAACCACTGATG TCCTTAAGCAAAATAGACACAAATCGAGTATTTCTTTGAGTCATCGGTAA AAAATTATGGGCCCCTTCTAGTGCCACAATTGGGCTTCTAAATAATGTAG TTGAGTCTAATACAATGCGCGCGTTCAACTGATTTATCATCGATGGTTTT ATTATATCCGCAgatgcaaaaacaaaacataagtCATATAAATAGTCGAA ATAATTAACCCAGGGCAGATGCAgatgcaaaaacaaaacataagtCATAT AAATAGTCGAAATAATTAACCCATGGCTGGCAGGACATGCCACAAAATGA CTCATACTTtcaatctgtttttttttcagtgaaatATGTGAGATGACGAG TATACGAAAAGAAGATGTGATCTCCACACTCCAACATTTGAATTTATTAC AGTATTATAAAGGACAATATGTGATCTGTATAACAAAGGAGATTCTTGAG TCACACTCAAAAGGAATGAAAAAACGCAAAATAAGAATCGATCCTAAATG CTTGCATTGGCAACCGAAAGACTGGGCCAAACGTGGTAAATGGTAAGGCT GACGAGTGAGAATGGTGATATTATTTGGTCAGTTGATGGATTGAATTTAA GTAAaacacctctgtctcacagctccggtggaacttttttcctcagtggg gattaAAACTTCTATCGAAATTCCaaaggggatagaaattctattgtacc aaggtaaaaaaatccagtgggatggttttggagtgcaatttagGGATGAA ATGAAAGTCTATTCCCCAGTGGGCTGAAATTCCacggtattttcccaccg gggacgacttttttgccaaattttccagtggggctggggtcccagcgggt ctgtgagaaggtgtAGAAATGAGTCGAAGAAGTAAAACAAAAGTAAATGA TTTCATTACTTTACATTAATTTTAAGTAGCTCTAGTAAATCTGAGCACAA GAGTGTTTCAAAATATCGAGAACGAAGGGTCCTTATCATATAGCACTATG AAAAGCTATGAAAATGCTTGTCCAAATTTCCGACTATATCCATTGTTAAG GCGAGCCATGACCCCAAAGACGTTTGTATACAAATCAGCAGTGAAGGCTT CATCATAACATTAGGTTCCTCTTCTAAGAGTACAAGTACTTTATTATTTC TTTGCTTCCAGTGTTATCTTTAGAAAACATTTATATTTTGCCCATCTGTA CCTTATAATAGTATTTGAAATTGTATTTTGTAAATATATTAGATGATTCC TATTACGATTTAAAAACATTGTCAAATTTGTG

Coding sequence (CDS) from alignment at scaffold_375:352371..361852+

>TCONS_00062969 ID=TCONS_00062969|Name=TCONS_00062969|organism=Clytia hemisphaerica|type=CDS|length=1386bp|location=Sequence derived from alignment at scaffold_375:352371..361852+ (Clytia hemisphaerica)
TCAAGTGAGGACTACAATGTGGCTTGTATCCTTACCCTTCCTTCTTATCA
ACGAATGGGGTATGGGAAAGTGCTCATCGAATTCAGTTACGAGCTATCAA
AATTCGAAGGGAAGACGGGACATCCTGAAAAACCGTTATCAGACTTGGGA
CTGTTATCATACCGATCATATTGGTCACAAACCATCTTAGAAATCCTTCT
TCAATTGAAAAGTGAAGAAGGAACAAACCCTATAATAACTATAAAtgaaa
tATGTGAGATGACGAGTATACGAAAAGAAGATGTGATCTCCACACTCCAA
CATTTGAATTTATTACAGTATTATAAAGGACAATATGTGATCTGTATAAC
AAAGGAGATTCTTGAGTCACACTCAAAAGGAATGAAAAAACGCAAAATAA
GAATCGATCCTAAATGCTTGCATTGGCAACCGAAAGACTGGGCCAAACGT
GGTAAATGGTAATCAAGTGAGGACTACAATGTGGCTTGTATCCTTACCCT
TCCTTCTTATCAACGAATGGGGTATGGGAAAGTGCTCATCGAATTCAGTT
ACGAGCTATCAAAATTCGAAGGGAAGACGGGACATCCTGAAAAACCGTTA
TCAGACTTGGGACTGTTATCATACCGATCATATTGGTCACAAACCATCTT
AGAAATCCTTCTTCAATTGAAAAGTGAAGAAGGAACAAACCCTATAATAA
CTATAAAtgaaatATGTGAGATGACGAGTATACGAAAAGAAGATGTGATC
TCCACACTCCAACATTTGAATTTATTACAGTATTATAAAGGACAATATGT
GATCTGTATAACAAAGGAGATTCTTGAGTCACACTCAAAAGGAATGAAAA
AACGCAAAATAAGAATCGATCCTAAATGCTTGCATTGGCAACCGAAAGAC
TGGGCCAAACGTGGTAAATGGTAATCAAGTGAGGACTACAATGTGGCTTG
TATCCTTACCCTTCCTTCTTATCAACGAATGGGGTATGGGAAAGTGCTCA
TCGAATTCAGTTACGAGCTATCAAAATTCGAAGGGAAGACGGGACATCCT
GAAAAACCGTTATCAGACTTGGGACTGTTATCATACCGATCATATTGGTC
ACAAACCATCTTAGAAATCCTTCTTCAATTGAAAAGTGAAGAAGGAACAA
ACCCTATAATAACTATAAAtgaaatATGTGAGATGACGAGTATACGAAAA
GAAGATGTGATCTCCACACTCCAACATTTGAATTTATTACAGTATTATAA
AGGACAATATGTGATCTGTATAACAAAGGAGATTCTTGAGTCACACTCAA
AAGGAATGAAAAAACGCAAAATAAGAATCGATCCTAAATGCTTGCATTGG
CAACCGAAAGACTGGGCCAAACGTGGTAAATGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039440XLOC_039440Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062969-proteinTCONS_00062969-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062969-exon-scaffold_375-1491911889:352371..352455TCONS_00062969-exon-scaffold_375-1491911889:352371..352455Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1510915933:352371..352455TCONS_00062969-exon-scaffold_375-1510915933:352371..352455Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1575043694:352371..352455TCONS_00062969-exon-scaffold_375-1575043694:352371..352455Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1491911889:357077..357236TCONS_00062969-exon-scaffold_375-1491911889:357077..357236Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1510915933:357077..357236TCONS_00062969-exon-scaffold_375-1510915933:357077..357236Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1575043694:357077..357236TCONS_00062969-exon-scaffold_375-1575043694:357077..357236Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1491911889:360900..361852TCONS_00062969-exon-scaffold_375-1491911889:360900..361852Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1510915933:360900..361852TCONS_00062969-exon-scaffold_375-1510915933:360900..361852Clytia hemisphaericaexon
TCONS_00062969-exon-scaffold_375-1575043694:360900..361852TCONS_00062969-exon-scaffold_375-1575043694:360900..361852Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:352371..361852 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.648 11.4423 5.28814 5.82233 23.2317 17.345 13.4495 14.9056 7.55934 8.02 9.2446 8.62367 6.76116 8.98037 9.05343 10.441 7.1391 8.91388 9.06878 7.12434 6.18862 7.24454 11.455 11.2046 16.8085 17.0505 5.5731 6.41743 5.54201 6.24712
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002717HAT_MYST-type
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Blast
BLAST of TCONS_00062969 vs. Swiss-Prot (Human)
Match: KAT5 (Histone acetyltransferase KAT5 OS=Homo sapiens GN=KAT5 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 2.555e-74
Identity = 115/153 (75.16%), Postives = 134/153 (87.58%), Query Frame = 1
Query:    1 SSEDYNVACILTLPSYQRMGYGKVLIEFSYELSKFEGKTGHPEKPLSDLGLLSYRSYWSQTILEILLQLKSEEGTNPIITINEICEMTSIRKEDVISTLQHLNLLQYYKGQYVICITKEILESHSKGMKKRKIRIDPKCLHWQPKDWAKRGKW 459
            S+EDYNVACILTLP YQR GYGK+LIEFSYELSK EGKTG PEKPLSDLGLLSYRSYWSQTILEIL+ LKSE G  P ITINEI E+TSI+KEDVISTLQ+LNL+ YYKGQY++ ++++I++ H + M KR +RID KCLH+ PKDW+KRGKW
Sbjct:  361 STEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 513          
The following BLAST results are available for this feature:
BLAST of TCONS_00062969 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KAT52.555e-7475.16Histone acetyltransferase KAT5 OS=Homo sapiens GN=... [more]
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