TCONS_00062946 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00062946
Unique Name	TCONS_00062946
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3007

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_375:36880..41079+
coding sequence from alignment at scaffold_375:36880..41079+

transcript sequence

>TCONS_00062946 ID=TCONS_00062946|Name=TCONS_00062946|organism=Clytia hemisphaerica|type=transcript|length=3007bp
TTCAGGATGAAGtaaacaaaataacaaatagtaCATACCATATATATTTT
CATAACAAAAACTTGGAAAAGAATGTTCAGCTTTAGTGACGATTCTGAAA
GTGATGACGAAGAATGGGGAGGTAGCAACGTTACTGATATTGATGATGAT
TTCCGGTCAATTTCAAGACCGtcagaaagtgaaagtgaaagtgaattAGA
GCAAGATGAAAACGAAATTGAAAGCCATTTTAATGATCCACGAGGATTAC
TGCTTTCTATCAAAGAAGAATTTCACATTTCAAAGGTATCCAACGAAAGC
GCCAAAATGAAACCAGATTTTGTCACTCTGTTGAGAGAGATCAATGCAAG
TCgcacaaaatattttgggatatTGTTAGAAGAAAAGTATGATTCAAAGT
CCGATTCAAAGTCCCTCAAGGATGGTTTTAAATCATTGAGACATGGAGAC
CAAACAATAGTACAACATTTGGAACATGCAAACCAATCATTATCTGGGGA
TGAAAGATATTCGTTTTATGTGGTGAAATATGAACTCAAACACCCTGGCG
GTATCGAGCGCTACAAACAAAAACTTCTGCTGGGAGACTCGCACGGTTTG
TCTGATTCAACCAAACAGTGCAATTTTTCTGGTATTTGTCTCGGCATGAA
TGACGTCATCGTGATGTCAGAGGGAGAATTTGAAGATGCGTACATTAATG
AGGATGAAAAGGAAGAAAtaagaaacagaaaattttaCAACGACAGTATT
AGCAgtagtgaagaagaaaaagaagaagatttcGTCTCAAGATGTCTTAT
ACTTGCTGTTCCTTTCAATCGTCATTTCGAATCATTTTGCTATTCAAAAT
CACCATCACAATGTCTTCAATATTTAGCGAATGAAGTTGACAAGGCATCA
CCACAGTTCAAAGTTCACCTGAAAGAACTATTTGACAGGTTCTCATTGAA
AGCATTTAGATGCCTTACTAAACATTACAAACAATTATTGATCGAACTTG
TTACTAAGACCAAAGATGTGAAAACTGTCTCTTTGTACATTAACAAAATC
ATGGCACACAAGTTAAACTTTTCAGAGCAGATGCATGGTATCCCTGATAA
AACTAAGGAGAAAATTGCAGAAATGTTCCAATCTGTTCCTTGGGAGAAAA
TCAAAGATATTGTTTTGAATGTGATCGAAAATGTTGGGTTCTGGCAGTAT
AAAAGATGGATGGTAGTGTTTGACCAATCAGCAATCATTGATATTGCTCA
TAGAATTATcgatttgagttttcaaaaacttcaattttgcaATGGTGGGC
AAGCTTGTTCTCATTCGCTATgggaaaaaatctttcaaagtgTTCGTGAT
CATGAGGAATTATGGAGACAATGGAGAGATGATATCTTGCAGTGTCAGCA
TTtcacatcaaattttgaaattgtttcttCGATGTGTGATATATTGTTGT
TCGATAAACCATCCAAATTGTCTTCCGTTTTTAACAGCTTTGTGAAATGC
GCCAAGAAAGAAGTCGAGCAACAAATGAAACGAAAAAGAGAAACATCATC
AGAATGCCCAACTCTCATTTTACAATCATTTTACTATTGCAACCAAGACG
AGTTGATGATTCCATTAATTGTTTCTGTTGTCAAGCACACTCTGCGAAAT
CATCTCatctatttaaaagaattaATAGATTTGTTCGACTTTCTTTTTTC
TGAGGAATATTTTGTTATTGGTATGAATGTACTAAGTGGGTTATCCAAAG
AGCAATGTAGTCAAACAGATGATTTCAAGACGATAGTCGACATTTATCTT
ACTCAACTTTTTAACAAAGCGTCGATTTATAAATATGTAAATGAAAAAGC
TATTTTGGCTGAAATCCTTCTTAGAGGAAATAGAGGAAACGTCGCTTCAA
ACATAGAGAAGTATGTAGATCTTTGTCGGGAAGGTAACGAAAAACCTGAT
GCCATTTGCAAGATCATCTTTGAGCTTTTGgatatttcaatgaaaaacaC
AGAGTTGAGTTGTATAACTTTGATTGAAAACTTATTCGACTTATTTATTA
GTTTGTTGTCAAACCattacacaacgttgtttcaggAACTAACTATCAAG
TTGTTCAGTGCAGGAGACTCGTTTGCTTCAAAATTGGAGaaaatgttttc
gaattttaattttatataccaaatcaaaaaaagggtggacttttttataa
gagaccTCATGTATAAAGAGCATCCCAGAACAGAGACTTTCAAGAAATTA
CTGGAATGTATTTTGAAGGTTGTTCAAGAAATACTAGACGGTGGTAATCG
TGAACCTCATTTTATAATATCGACCTTGTTACCATTTCTCCAaggaattt
acaaaaatacttATCACAAAGAACTAGTAATAGACTTCATCTCGTTAGAG
AAATTTAATATCAATAGCGAGCAATATTATGCCAACTCTCAAAGTCGAGC
ATTTattaaaagtttgatttctgaATTCGATAGGAATTTGATCAAAACTG
ATTTCTATGCTGAACTTTTGAATGTTCATTTGAAAAGTTTAAAGTGCATA
CAAGAGAAAGGTTGCCCTAAGTTTAATTGGCGacaagaaaatgcaaaaat
tccCGATCACCCATACGTAGAGATTTTTCTCAAAAGCGATCTTGTGACTT
TTGTATACAGACATTTCAATAATATTGAAAATGCTAAAGGCTGGTTACAA
AATTACGCAAGAACGATTGATTACAGTGGTTACTGGCGACAACAAAATTA
CCGTTTTACTGGCATTGCTAGAGAAAATCAAGGTGTAGTGGAAGTGGTTT
TACAAAAAGGAAGAGGTGTTTACAAAATAATCcaggaaaaatatttcaac
ttgGCGTCATTGATTGAACAGCTTGAAGTGAAATTACGAAATTTTCCTCG
TATTCATTCCAAACTTCGTTCGTTGAAAAGACCTTTGAAAATTAAGGATG
ACGAATCCCCAATTCCAAGGAAAGCCCAAACAATCCGTGAAGAGTAACTT
ATAGTGA

Run BLAST on NCBI

protein sequence of TCONS_00062946-protein

>TCONS_00062946-protein ID=TCONS_00062946-protein|Name=TCONS_00062946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=974bp
MFSFSDDSESDDEEWGGSNVTDIDDDFRSISRPSESESESELEQDENEIE
SHFNDPRGLLLSIKEEFHISKVSNESAKMKPDFVTLLREINASRTKYFGI
LLEEKYDSKSDSKSLKDGFKSLRHGDQTIVQHLEHANQSLSGDERYSFYV
VKYELKHPGGIERYKQKLLLGDSHGLSDSTKQCNFSGICLGMNDVIVMSE
GEFEDAYINEDEKEEIRNRKFYNDSISSSEEEKEEDFVSRCLILAVPFNR
HFESFCYSKSPSQCLQYLANEVDKASPQFKVHLKELFDRFSLKAFRCLTK
HYKQLLIELVTKTKDVKTVSLYINKIMAHKLNFSEQMHGIPDKTKEKIAE
MFQSVPWEKIKDIVLNVIENVGFWQYKRWMVVFDQSAIIDIAHRIIDLSF
QKLQFCNGGQACSHSLWEKIFQSVRDHEELWRQWRDDILQCQHFTSNFEI
VSSMCDILLFDKPSKLSSVFNSFVKCAKKEVEQQMKRKRETSSECPTLIL
QSFYYCNQDELMIPLIVSVVKHTLRNHLIYLKELIDLFDFLFSEEYFVIG
MNVLSGLSKEQCSQTDDFKTIVDIYLTQLFNKASIYKYVNEKAILAEILL
RGNRGNVASNIEKYVDLCREGNEKPDAICKIIFELLDISMKNTELSCITL
IENLFDLFISLLSNHYTTLFQELTIKLFSAGDSFASKLEKMFSNFNFIYQ
IKKRVDFFIRDLMYKEHPRTETFKKLLECILKVVQEILDGGNREPHFIIS
TLLPFLQGIYKNTYHKELVIDFISLEKFNINSEQYYANSQSRAFIKSLIS
EFDRNLIKTDFYAELLNVHLKSLKCIQEKGCPKFNWRQENAKIPDHPYVE
IFLKSDLVTFVYRHFNNIENAKGWLQNYARTIDYSGYWRQQNYRFTGIAR
ENQGVVEVVLQKGRGVYKIIQEKYFNLASLIEQLEVKLRNFPRIHSKLRS
LKRPLKIKDDESPIPRKAQTIREE

Run BLAST on NCBI

transcript from alignment at scaffold_375:36880..41079+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00062946 ID=TCONS_00062946|Name=TCONS_00062946|organism=Clytia hemisphaerica|type=transcript|length=4200bp|location=Sequence derived from alignment at scaffold_375:36880..41079+ (Clytia hemisphaerica)
TTCAGGATGAAGtaaacaaaataacaaatagtaCATACCATATATATTTT
CATAACAAAAACTTGGAAAAGAATGTTCAGCTTTAGTGACGATTCTGAAA
GTGATGACGAAGAATGGGGAGGTAGCAACGTTACTGATATTGATGATGAT
TTCCGGTCAATTTCAAGACCGtcagaaagtgaaagtgaaagtgaattAGA
GCAAGATGAAAACGAAATTGAAAGCCATTTTGTAAGTAGCCGTTCTTTTT
CTAACTTGGTGCTTTTCAAGGGGAGGGGGAGCTTAGACTAGACTCTACTT
CTGGTGGAATTtggtttttggtaatttttgataACGTCGAGTTCCCTGAA
GTACACTAGAAGGACTTGGCGAGGTCTCAATTATGAAAGGAAAATACCCA
GAATTCCAGataacaaaagattttcttggaattgaaaatataattctaac
atgaataacagatttgcaatcccttattttcaaaaacaaatatcGCAGAT
TACCatatatactaccgggccacttgatcgcgccatccagtccaAGTGGA
CTCAGggttataaaaattaaaatgggcAATTTGACATTCTGGGGTTTGTG
GATGAAAAACTTGATAATATCGCATGAAAGGTTGGGCTTTGCCCTAATGG
AGTTGGTTCTTTTGTGCCTCCACGACAGCCGATCTTCATGGAAAAAAGAA
CCCTTTTATTCTTCACTCATATCACGGGAAATTTGAGTGGCAGTGAATTT
GTTTGCGCTTTTTATATACCAATTATACCTAAACCAAAAAATGCATAGCA
GGACTGGCTCCGGCCTATCCTTTTTATGACGAAAGTTATTGATTTCTATC
ACGCTTGGAATATTTATTATATACTCGTGTTGTCGCACCTTCCGGACAGG
AGGTGGGAGCAATGTGACCATGAGAGATTAAGATGAATTTTCCAATgttt
aattttctttactttacttCCTCAGAATGATCCACGAGGATTACTGCTTT
CTATCAAAGAAGAATTTCACATTTCAAAGGTATCCAACGAAAGCGCCAAA
ATGAAACCAGATTTTGTCACTCTGTTGAGAGAGGTATGTGTAGAATCCGC
TCTTATAGTTCTCTTATAGACATGTTTTATAGCACTGGCCACCTCGCTAC
CTGCGAATGAGCTTTCGAAAGGTCgcaaagaaaacaaaactttGCACAAA
CTCTATCTGGTTTGTTttcgttttaaatttttttttgacaaaaccaGCGT
TTAGACTGAATGTCTTTTTACCAGATCAATGCAAGTCgcacaaaatattt
tgggatatTGTTAGAAGAAAAGTATGATTCAAAGTCCGATTCAAAGTCCC
TCAAGGATGGTTTTAAATCATTGAGACATGGAGACCAAACAATAGTACAA
CATTTGGAACATGCAAACCAATCATTATCTGGGGATGAAAGATATTCGTT
TTATGTGGTGAAATATGAACTCAAACACCCTGGCGGTATCGAGCGTatgt
attttaatattttcttctcAAATTGGAGTTTGCACATAAGGTTTCATTTG
TTTCTCAAAGTTGTTCTGAAAACGTGAGAATTTCTGTCTATCTGTCTTTC
TGTTAGTTCGGCTTTATTgttcaaaacttttcatttttgcttttgatGAT
TTTCGTGAGCTTCTTTTGTAAATTAAGAATCCCAAGAGCGTCATAATTTT
CGACCGACCTCAAATTATCTGCTTTGTTTGGAATAAATTCTATTGATTTT
AGGCTACAAACAAAAACTTCTGCTGGGAGACTCGCACGGTTTGTCTGATT
CAACCAAACAGTGCAATTTTTCTGGTATTTGTCTCGGCATGAATGACGTC
ATCGTGATGTCAGAGGGAGAATTTGAAGATGCGTACATTAATGAGGATGA
AAAGGAAGAAAtaagaaacagaaaattttaCAACGACAGTATTAGCAgta
gtgaagaagaaaaagaagaagatttcGTCTCAAGATGTCTTATACTTGCT
GTTCCTTTCAATCGTCATTTCGAATCATTTTGCTATTCAAAATCACCATC
ACAATGTCTTCAATATTTAGCGAATGAAGTTGACAAGGCATCACCACAGT
TCAAAGTTCACCTGAAAGAACTATTTGACAGGTTCTCATTGAAAGCATTT
AGATGCCTTACTAAACATTACAAACAATTATTGATCGAACTTGTTACTAA
GACCAAAGATGTGAAAACTGTCTCTTTGTACATTAACAAAATCATGGCAC
ACAAGTTAAACTTTTCAGAGCAGATGCATGGTATCCCTGATAAAACTAAG
GAGAAAATTGCAGAAATGTTCCAATCTGTTCCTTGGGAGAAAATCAAAGA
TATTGTTTTGAATGTGATCGAAAATGTTGGGTTCTGGCAGTATAAAAGAT
GGATGGTAGTGTTTGACCAATCAGCAATCATTGATATTGCTCATAGAATT
ATcgatttgagttttcaaaaacttcaattttgcaATGGTGGGCAAGCTTG
TTCTCATTCGCTATgggaaaaaatctttcaaagtgTTCGTGATCATGAGG
AATTATGGAGACAATGGAGAGATGATATCTTGCAGTGTCAGCATTtcaca
tcaaattttgaaattgtttcttCGATGTGTGATATATTGTTGTTCGATAA
ACCATCCAAATTGTCTTCCGTTTTTAACAGCTTTGTGAAATGCGCCAAGA
AAGAAGTCGAGCAACAAATGAAACGAAAAAGAGAAACATCATCAGAATGC
CCAACTCTCATTTTACAATCATTTTACTATTGCAACCAAGACGAGTTGAT
GATTCCATTAATTGTTTCTGTTGTCAAGCACACTCTGCGAAATCATCTCa
tctatttaaaagaattaATAGATTTGTTCGACTTTCTTTTTTCTGAGGAA
TATTTTGTTATTGGTATGAATGTACTAAGTGGGTTATCCAAAGAGCAATG
TAGTCAAACAGATGATTTCAAGACGATAGTCGACATTTATCTTACTCAAC
TTTTTAACAAAGCGTCGATTTATAAATATGTAAATGAAAAAGCTATTTTG
GCTGAAATCCTTCTTAGAGGAAATAGAGGAAACGTCGCTTCAAACATAGA
GAAGTATGTAGATCTTTGTCGGGAAGGTAACGAAAAACCTGATGCCATTT
GCAAGATCATCTTTGAGCTTTTGgatatttcaatgaaaaacaCAGAGTTG
AGTTGTATAACTTTGATTGAAAACTTATTCGACTTATTTATTAGTTTGTT
GTCAAACCattacacaacgttgtttcaggAACTAACTATCAAGTTGTTCA
GTGCAGGAGACTCGTTTGCTTCAAAATTGGAGaaaatgttttcgaatttt
aattttatataccaaatcaaaaaaagggtggacttttttataagagaccT
CATGTATAAAGAGCATCCCAGAACAGAGACTTTCAAGAAATTACTGGAAT
GTATTTTGAAGGTTGTTCAAGAAATACTAGACGGTGGTAATCGTGAACCT
CATTTTATAATATCGACCTTGTTACCATTTCTCCAaggaatttacaaaaa
tacttATCACAAAGAACTAGTAATAGACTTCATCTCGTTAGAGAAATTTA
ATATCAATAGCGAGCAATATTATGCCAACTCTCAAAGTCGAGCATTTatt
aaaagtttgatttctgaATTCGATAGGAATTTGATCAAAACTGATTTCTA
TGCTGAACTTTTGAATGTTCATTTGAAAAGTTTAAAGTGCATACAAGAGA
AAGGTTGCCCTAAGTTTAATTGGCGacaagaaaatgcaaaaattccCGAT
CACCCATACGTAGAGATTTTTCTCAAAAGCGATCTTGTGACTTTTGTATA
CAGACATTTCAATAATATTGAAAATGCTAAAGGCTGGTTACAAAATTACG
CAAGAACGATTGATTACAGTGGTTACTGGCGACAACAAAATTACCGTTTT
ACTGGCATTGCTAGAGAAAATCAAGGTGTAGTGGAAGTGGTTTTACAAAA
AGGAAGAGGTGTTTACAAAATAATCcaggaaaaatatttcaacttgGCGT
CATTGATTGAACAGCTTGAAGTGAAATTACGAAATTTTCCTCGTATTCAT
TCCAAACTTCGTTCGTTGAAAAGACCTTTGAAAATTAAGGATGACGAATC
CCCAATTCCAAGGAAAGCCCAAACAATCCGTGAAGAGTAACTTATAGTGA

Coding sequence (CDS) from alignment at scaffold_375:36880..41079+

>TCONS_00062946 ID=TCONS_00062946|Name=TCONS_00062946|organism=Clytia hemisphaerica|type=CDS|length=11700bp|location=Sequence derived from alignment at scaffold_375:36880..41079+ (Clytia hemisphaerica)
ATGTTCAGCTTTAGTGACGATTCTGAAAGTGATGACGAAGAATGGGGAGG
TAGCAACGTTACTGATATTGATGATGATTTCCGGTCAATTTCAAGACCGt
cagaaagtgaaagtgaaagtgaattAGAGCAAGATGAAAACGAAATTGAA
AGCCATTTTAATGATCCACGAGGATTACTGCTTTCTATCAAAGAAGAATT
TCACATTTCAAAGGTATCCAACGAAAGCGCCAAAATGAAACCAGATTTTG
TCACTCTGTTGAGAGAGATCAATGCAAGTCgcacaaaatattttgggata
tTGTTAGAAGAAAAGTATGATTCAAAGTCCGATTCAAAGTCCCTCAAGGA
TGGTTTTAAATCATTGAGACATGGAGACCAAACAATAGTACAACATTTGG
AACATGCAAACCAATCATTATCTGGGGATGAAAGATATTCGTTTTATGTG
GTGAAATATGAACTCAAACACCCTGGCGGTATCGAGCGCTACAAACAAAA
ACTTCTGCTGGGAGACTCGCACGGTTTGTCTGATTCAACCAAACAGTGCA
ATTTTTCTGGTATTTGTCTCGGCATGAATGACGTCATCGTGATGTCAGAG
GGAGAATTTGAAGATGCGTACATTAATGAGGATGAAAAGGAAGAAAtaag
aaacagaaaattttaCAACGACAGTATTAGCAgtagtgaagaagaaaaag
aagaagatttcGTCTCAAGATGTCTTATACTTGCTGTTCCTTTCAATCGT
CATTTCGAATCATTTTGCTATTCAAAATCACCATCACAATGTCTTCAATA
TTTAGCGAATGAAGTTGACAAGGCATCACCACAGTTCAAAGTTCACCTGA
AAGAACTATTTGACAGGTTCTCATTGAAAGCATTTAGATGCCTTACTAAA
CATTACAAACAATTATTGATCGAACTTGTTACTAAGACCAAAGATGTGAA
AACTGTCTCTTTGTACATTAACAAAATCATGGCACACAAGTTAAACTTTT
CAGAGCAGATGCATGGTATCCCTGATAAAACTAAGGAGAAAATTGCAGAA
ATGTTCCAATCTGTTCCTTGGGAGAAAATCAAAGATATTGTTTTGAATGT
GATCGAAAATGTTGGGTTCTGGCAGTATAAAAGATGGATGGTAGTGTTTG
ACCAATCAGCAATCATTGATATTGCTCATAGAATTATcgatttgagtttt
caaaaacttcaattttgcaATGGTGGGCAAGCTTGTTCTCATTCGCTATg
ggaaaaaatctttcaaagtgTTCGTGATCATGAGGAATTATGGAGACAAT
GGAGAGATGATATCTTGCAGTGTCAGCATTtcacatcaaattttgaaatt
gtttcttCGATGTGTGATATATTGTTGTTCGATAAACCATCCAAATTGTC
TTCCGTTTTTAACAGCTTTGTGAAATGCGCCAAGAAAGAAGTCGAGCAAC
AAATGAAACGAAAAAGAGAAACATCATCAGAATGCCCAACTCTCATTTTA
CAATCATTTTACTATTGCAACCAAGACGAGTTGATGATTCCATTAATTGT
TTCTGTTGTCAAGCACACTCTGCGAAATCATCTCatctatttaaaagaat
taATAGATTTGTTCGACTTTCTTTTTTCTGAGGAATATTTTGTTATTGGT
ATGAATGTACTAAGTGGGTTATCCAAAGAGCAATGTAGTCAAACAGATGA
TTTCAAGACGATAGTCGACATTTATCTTACTCAACTTTTTAACAAAGCGT
CGATTTATAAATATGTAAATGAAAAAGCTATTTTGGCTGAAATCCTTCTT
AGAGGAAATAGAGGAAACGTCGCTTCAAACATAGAGAAGTATGTAGATCT
TTGTCGGGAAGGTAACGAAAAACCTGATGCCATTTGCAAGATCATCTTTG
AGCTTTTGgatatttcaatgaaaaacaCAGAGTTGAGTTGTATAACTTTG
ATTGAAAACTTATTCGACTTATTTATTAGTTTGTTGTCAAACCattacac
aacgttgtttcaggAACTAACTATCAAGTTGTTCAGTGCAGGAGACTCGT
TTGCTTCAAAATTGGAGaaaatgttttcgaattttaattttatataccaa
atcaaaaaaagggtggacttttttataagagaccTCATGTATAAAGAGCA
TCCCAGAACAGAGACTTTCAAGAAATTACTGGAATGTATTTTGAAGGTTG
TTCAAGAAATACTAGACGGTGGTAATCGTGAACCTCATTTTATAATATCG
ACCTTGTTACCATTTCTCCAaggaatttacaaaaatacttATCACAAAGA
ACTAGTAATAGACTTCATCTCGTTAGAGAAATTTAATATCAATAGCGAGC
AATATTATGCCAACTCTCAAAGTCGAGCATTTattaaaagtttgatttct
gaATTCGATAGGAATTTGATCAAAACTGATTTCTATGCTGAACTTTTGAA
TGTTCATTTGAAAAGTTTAAAGTGCATACAAGAGAAAGGTTGCCCTAAGT
TTAATTGGCGacaagaaaatgcaaaaattccCGATCACCCATACGTAGAG
ATTTTTCTCAAAAGCGATCTTGTGACTTTTGTATACAGACATTTCAATAA
TATTGAAAATGCTAAAGGCTGGTTACAAAATTACGCAAGAACGATTGATT
ACAGTGGTTACTGGCGACAACAAAATTACCGTTTTACTGGCATTGCTAGA
GAAAATCAAGGTGTAGTGGAAGTGGTTTTACAAAAAGGAAGAGGTGTTTA
CAAAATAATCcaggaaaaatatttcaacttgGCGTCATTGATTGAACAGC
TTGAAGTGAAATTACGAAATTTTCCTCGTATTCATTCCAAACTTCGTTCG
TTGAAAAGACCTTTGAAAATTAAGGATGACGAATCCCCAATTCCAAGGAA
AGCCCAAACAATCCGTGAAGAGTAAATGTTCAGCTTTAGTGACGATTCTG
AAAGTGATGACGAAGAATGGGGAGGTAGCAACGTTACTGATATTGATGAT
GATTTCCGGTCAATTTCAAGACCGtcagaaagtgaaagtgaaagtgaatt
AGAGCAAGATGAAAACGAAATTGAAAGCCATTTTAATGATCCACGAGGAT
TACTGCTTTCTATCAAAGAAGAATTTCACATTTCAAAGGTATCCAACGAA
AGCGCCAAAATGAAACCAGATTTTGTCACTCTGTTGAGAGAGATCAATGC
AAGTCgcacaaaatattttgggatatTGTTAGAAGAAAAGTATGATTCAA
AGTCCGATTCAAAGTCCCTCAAGGATGGTTTTAAATCATTGAGACATGGA
GACCAAACAATAGTACAACATTTGGAACATGCAAACCAATCATTATCTGG
GGATGAAAGATATTCGTTTTATGTGGTGAAATATGAACTCAAACACCCTG
GCGGTATCGAGCGCTACAAACAAAAACTTCTGCTGGGAGACTCGCACGGT
TTGTCTGATTCAACCAAACAGTGCAATTTTTCTGGTATTTGTCTCGGCAT
GAATGACGTCATCGTGATGTCAGAGGGAGAATTTGAAGATGCGTACATTA
ATGAGGATGAAAAGGAAGAAAtaagaaacagaaaattttaCAACGACAGT
ATTAGCAgtagtgaagaagaaaaagaagaagatttcGTCTCAAGATGTCT
TATACTTGCTGTTCCTTTCAATCGTCATTTCGAATCATTTTGCTATTCAA
AATCACCATCACAATGTCTTCAATATTTAGCGAATGAAGTTGACAAGGCA
TCACCACAGTTCAAAGTTCACCTGAAAGAACTATTTGACAGGTTCTCATT
GAAAGCATTTAGATGCCTTACTAAACATTACAAACAATTATTGATCGAAC
TTGTTACTAAGACCAAAGATGTGAAAACTGTCTCTTTGTACATTAACAAA
ATCATGGCACACAAGTTAAACTTTTCAGAGCAGATGCATGGTATCCCTGA
TAAAACTAAGGAGAAAATTGCAGAAATGTTCCAATCTGTTCCTTGGGAGA
AAATCAAAGATATTGTTTTGAATGTGATCGAAAATGTTGGGTTCTGGCAG
TATAAAAGATGGATGGTAGTGTTTGACCAATCAGCAATCATTGATATTGC
TCATAGAATTATcgatttgagttttcaaaaacttcaattttgcaATGGTG
GGCAAGCTTGTTCTCATTCGCTATgggaaaaaatctttcaaagtgTTCGT
GATCATGAGGAATTATGGAGACAATGGAGAGATGATATCTTGCAGTGTCA
GCATTtcacatcaaattttgaaattgtttcttCGATGTGTGATATATTGT
TGTTCGATAAACCATCCAAATTGTCTTCCGTTTTTAACAGCTTTGTGAAA
TGCGCCAAGAAAGAAGTCGAGCAACAAATGAAACGAAAAAGAGAAACATC
ATCAGAATGCCCAACTCTCATTTTACAATCATTTTACTATTGCAACCAAG
ACGAGTTGATGATTCCATTAATTGTTTCTGTTGTCAAGCACACTCTGCGA
AATCATCTCatctatttaaaagaattaATAGATTTGTTCGACTTTCTTTT
TTCTGAGGAATATTTTGTTATTGGTATGAATGTACTAAGTGGGTTATCCA
AAGAGCAATGTAGTCAAACAGATGATTTCAAGACGATAGTCGACATTTAT
CTTACTCAACTTTTTAACAAAGCGTCGATTTATAAATATGTAAATGAAAA
AGCTATTTTGGCTGAAATCCTTCTTAGAGGAAATAGAGGAAACGTCGCTT
CAAACATAGAGAAGTATGTAGATCTTTGTCGGGAAGGTAACGAAAAACCT
GATGCCATTTGCAAGATCATCTTTGAGCTTTTGgatatttcaatgaaaaa
caCAGAGTTGAGTTGTATAACTTTGATTGAAAACTTATTCGACTTATTTA
TTAGTTTGTTGTCAAACCattacacaacgttgtttcaggAACTAACTATC
AAGTTGTTCAGTGCAGGAGACTCGTTTGCTTCAAAATTGGAGaaaatgtt
ttcgaattttaattttatataccaaatcaaaaaaagggtggactttttta
taagagaccTCATGTATAAAGAGCATCCCAGAACAGAGACTTTCAAGAAA
TTACTGGAATGTATTTTGAAGGTTGTTCAAGAAATACTAGACGGTGGTAA
TCGTGAACCTCATTTTATAATATCGACCTTGTTACCATTTCTCCAaggaa
tttacaaaaatacttATCACAAAGAACTAGTAATAGACTTCATCTCGTTA
GAGAAATTTAATATCAATAGCGAGCAATATTATGCCAACTCTCAAAGTCG
AGCATTTattaaaagtttgatttctgaATTCGATAGGAATTTGATCAAAA
CTGATTTCTATGCTGAACTTTTGAATGTTCATTTGAAAAGTTTAAAGTGC
ATACAAGAGAAAGGTTGCCCTAAGTTTAATTGGCGacaagaaaatgcaaa
aattccCGATCACCCATACGTAGAGATTTTTCTCAAAAGCGATCTTGTGA
CTTTTGTATACAGACATTTCAATAATATTGAAAATGCTAAAGGCTGGTTA
CAAAATTACGCAAGAACGATTGATTACAGTGGTTACTGGCGACAACAAAA
TTACCGTTTTACTGGCATTGCTAGAGAAAATCAAGGTGTAGTGGAAGTGG
TTTTACAAAAAGGAAGAGGTGTTTACAAAATAATCcaggaaaaatatttc
aacttgGCGTCATTGATTGAACAGCTTGAAGTGAAATTACGAAATTTTCC
TCGTATTCATTCCAAACTTCGTTCGTTGAAAAGACCTTTGAAAATTAAGG
ATGACGAATCCCCAATTCCAAGGAAAGCCCAAACAATCCGTGAAGAGTAA
ATGTTCAGCTTTAGTGACGATTCTGAAAGTGATGACGAAGAATGGGGAGG
TAGCAACGTTACTGATATTGATGATGATTTCCGGTCAATTTCAAGACCGt
cagaaagtgaaagtgaaagtgaattAGAGCAAGATGAAAACGAAATTGAA
AGCCATTTTAATGATCCACGAGGATTACTGCTTTCTATCAAAGAAGAATT
TCACATTTCAAAGGTATCCAACGAAAGCGCCAAAATGAAACCAGATTTTG
TCACTCTGTTGAGAGAGATCAATGCAAGTCgcacaaaatattttgggata
tTGTTAGAAGAAAAGTATGATTCAAAGTCCGATTCAAAGTCCCTCAAGGA
TGGTTTTAAATCATTGAGACATGGAGACCAAACAATAGTACAACATTTGG
AACATGCAAACCAATCATTATCTGGGGATGAAAGATATTCGTTTTATGTG
GTGAAATATGAACTCAAACACCCTGGCGGTATCGAGCGCTACAAACAAAA
ACTTCTGCTGGGAGACTCGCACGGTTTGTCTGATTCAACCAAACAGTGCA
ATTTTTCTGGTATTTGTCTCGGCATGAATGACGTCATCGTGATGTCAGAG
GGAGAATTTGAAGATGCGTACATTAATGAGGATGAAAAGGAAGAAAtaag
aaacagaaaattttaCAACGACAGTATTAGCAgtagtgaagaagaaaaag
aagaagatttcGTCTCAAGATGTCTTATACTTGCTGTTCCTTTCAATCGT
CATTTCGAATCATTTTGCTATTCAAAATCACCATCACAATGTCTTCAATA
TTTAGCGAATGAAGTTGACAAGGCATCACCACAGTTCAAAGTTCACCTGA
AAGAACTATTTGACAGGTTCTCATTGAAAGCATTTAGATGCCTTACTAAA
CATTACAAACAATTATTGATCGAACTTGTTACTAAGACCAAAGATGTGAA
AACTGTCTCTTTGTACATTAACAAAATCATGGCACACAAGTTAAACTTTT
CAGAGCAGATGCATGGTATCCCTGATAAAACTAAGGAGAAAATTGCAGAA
ATGTTCCAATCTGTTCCTTGGGAGAAAATCAAAGATATTGTTTTGAATGT
GATCGAAAATGTTGGGTTCTGGCAGTATAAAAGATGGATGGTAGTGTTTG
ACCAATCAGCAATCATTGATATTGCTCATAGAATTATcgatttgagtttt
caaaaacttcaattttgcaATGGTGGGCAAGCTTGTTCTCATTCGCTATg
ggaaaaaatctttcaaagtgTTCGTGATCATGAGGAATTATGGAGACAAT
GGAGAGATGATATCTTGCAGTGTCAGCATTtcacatcaaattttgaaatt
gtttcttCGATGTGTGATATATTGTTGTTCGATAAACCATCCAAATTGTC
TTCCGTTTTTAACAGCTTTGTGAAATGCGCCAAGAAAGAAGTCGAGCAAC
AAATGAAACGAAAAAGAGAAACATCATCAGAATGCCCAACTCTCATTTTA
CAATCATTTTACTATTGCAACCAAGACGAGTTGATGATTCCATTAATTGT
TTCTGTTGTCAAGCACACTCTGCGAAATCATCTCatctatttaaaagaat
taATAGATTTGTTCGACTTTCTTTTTTCTGAGGAATATTTTGTTATTGGT
ATGAATGTACTAAGTGGGTTATCCAAAGAGCAATGTAGTCAAACAGATGA
TTTCAAGACGATAGTCGACATTTATCTTACTCAACTTTTTAACAAAGCGT
CGATTTATAAATATGTAAATGAAAAAGCTATTTTGGCTGAAATCCTTCTT
AGAGGAAATAGAGGAAACGTCGCTTCAAACATAGAGAAGTATGTAGATCT
TTGTCGGGAAGGTAACGAAAAACCTGATGCCATTTGCAAGATCATCTTTG
AGCTTTTGgatatttcaatgaaaaacaCAGAGTTGAGTTGTATAACTTTG
ATTGAAAACTTATTCGACTTATTTATTAGTTTGTTGTCAAACCattacac
aacgttgtttcaggAACTAACTATCAAGTTGTTCAGTGCAGGAGACTCGT
TTGCTTCAAAATTGGAGaaaatgttttcgaattttaattttatataccaa
atcaaaaaaagggtggacttttttataagagaccTCATGTATAAAGAGCA
TCCCAGAACAGAGACTTTCAAGAAATTACTGGAATGTATTTTGAAGGTTG
TTCAAGAAATACTAGACGGTGGTAATCGTGAACCTCATTTTATAATATCG
ACCTTGTTACCATTTCTCCAaggaatttacaaaaatacttATCACAAAGA
ACTAGTAATAGACTTCATCTCGTTAGAGAAATTTAATATCAATAGCGAGC
AATATTATGCCAACTCTCAAAGTCGAGCATTTattaaaagtttgatttct
gaATTCGATAGGAATTTGATCAAAACTGATTTCTATGCTGAACTTTTGAA
TGTTCATTTGAAAAGTTTAAAGTGCATACAAGAGAAAGGTTGCCCTAAGT
TTAATTGGCGacaagaaaatgcaaaaattccCGATCACCCATACGTAGAG
ATTTTTCTCAAAAGCGATCTTGTGACTTTTGTATACAGACATTTCAATAA
TATTGAAAATGCTAAAGGCTGGTTACAAAATTACGCAAGAACGATTGATT
ACAGTGGTTACTGGCGACAACAAAATTACCGTTTTACTGGCATTGCTAGA
GAAAATCAAGGTGTAGTGGAAGTGGTTTTACAAAAAGGAAGAGGTGTTTA
CAAAATAATCcaggaaaaatatttcaacttgGCGTCATTGATTGAACAGC
TTGAAGTGAAATTACGAAATTTTCCTCGTATTCATTCCAAACTTCGTTCG
TTGAAAAGACCTTTGAAAATTAAGGATGACGAATCCCCAATTCCAAGGAA
AGCCCAAACAATCCGTGAAGAGTAAATGTTCAGCTTTAGTGACGATTCTG
AAAGTGATGACGAAGAATGGGGAGGTAGCAACGTTACTGATATTGATGAT
GATTTCCGGTCAATTTCAAGACCGtcagaaagtgaaagtgaaagtgaatt
AGAGCAAGATGAAAACGAAATTGAAAGCCATTTTAATGATCCACGAGGAT
TACTGCTTTCTATCAAAGAAGAATTTCACATTTCAAAGGTATCCAACGAA
AGCGCCAAAATGAAACCAGATTTTGTCACTCTGTTGAGAGAGATCAATGC
AAGTCgcacaaaatattttgggatatTGTTAGAAGAAAAGTATGATTCAA
AGTCCGATTCAAAGTCCCTCAAGGATGGTTTTAAATCATTGAGACATGGA
GACCAAACAATAGTACAACATTTGGAACATGCAAACCAATCATTATCTGG
GGATGAAAGATATTCGTTTTATGTGGTGAAATATGAACTCAAACACCCTG
GCGGTATCGAGCGCTACAAACAAAAACTTCTGCTGGGAGACTCGCACGGT
TTGTCTGATTCAACCAAACAGTGCAATTTTTCTGGTATTTGTCTCGGCAT
GAATGACGTCATCGTGATGTCAGAGGGAGAATTTGAAGATGCGTACATTA
ATGAGGATGAAAAGGAAGAAAtaagaaacagaaaattttaCAACGACAGT
ATTAGCAgtagtgaagaagaaaaagaagaagatttcGTCTCAAGATGTCT
TATACTTGCTGTTCCTTTCAATCGTCATTTCGAATCATTTTGCTATTCAA
AATCACCATCACAATGTCTTCAATATTTAGCGAATGAAGTTGACAAGGCA
TCACCACAGTTCAAAGTTCACCTGAAAGAACTATTTGACAGGTTCTCATT
GAAAGCATTTAGATGCCTTACTAAACATTACAAACAATTATTGATCGAAC
TTGTTACTAAGACCAAAGATGTGAAAACTGTCTCTTTGTACATTAACAAA
ATCATGGCACACAAGTTAAACTTTTCAGAGCAGATGCATGGTATCCCTGA
TAAAACTAAGGAGAAAATTGCAGAAATGTTCCAATCTGTTCCTTGGGAGA
AAATCAAAGATATTGTTTTGAATGTGATCGAAAATGTTGGGTTCTGGCAG
TATAAAAGATGGATGGTAGTGTTTGACCAATCAGCAATCATTGATATTGC
TCATAGAATTATcgatttgagttttcaaaaacttcaattttgcaATGGTG
GGCAAGCTTGTTCTCATTCGCTATgggaaaaaatctttcaaagtgTTCGT
GATCATGAGGAATTATGGAGACAATGGAGAGATGATATCTTGCAGTGTCA
GCATTtcacatcaaattttgaaattgtttcttCGATGTGTGATATATTGT
TGTTCGATAAACCATCCAAATTGTCTTCCGTTTTTAACAGCTTTGTGAAA
TGCGCCAAGAAAGAAGTCGAGCAACAAATGAAACGAAAAAGAGAAACATC
ATCAGAATGCCCAACTCTCATTTTACAATCATTTTACTATTGCAACCAAG
ACGAGTTGATGATTCCATTAATTGTTTCTGTTGTCAAGCACACTCTGCGA
AATCATCTCatctatttaaaagaattaATAGATTTGTTCGACTTTCTTTT
TTCTGAGGAATATTTTGTTATTGGTATGAATGTACTAAGTGGGTTATCCA
AAGAGCAATGTAGTCAAACAGATGATTTCAAGACGATAGTCGACATTTAT
CTTACTCAACTTTTTAACAAAGCGTCGATTTATAAATATGTAAATGAAAA
AGCTATTTTGGCTGAAATCCTTCTTAGAGGAAATAGAGGAAACGTCGCTT
CAAACATAGAGAAGTATGTAGATCTTTGTCGGGAAGGTAACGAAAAACCT
GATGCCATTTGCAAGATCATCTTTGAGCTTTTGgatatttcaatgaaaaa
caCAGAGTTGAGTTGTATAACTTTGATTGAAAACTTATTCGACTTATTTA
TTAGTTTGTTGTCAAACCattacacaacgttgtttcaggAACTAACTATC
AAGTTGTTCAGTGCAGGAGACTCGTTTGCTTCAAAATTGGAGaaaatgtt
ttcgaattttaattttatataccaaatcaaaaaaagggtggactttttta
taagagaccTCATGTATAAAGAGCATCCCAGAACAGAGACTTTCAAGAAA
TTACTGGAATGTATTTTGAAGGTTGTTCAAGAAATACTAGACGGTGGTAA
TCGTGAACCTCATTTTATAATATCGACCTTGTTACCATTTCTCCAaggaa
tttacaaaaatacttATCACAAAGAACTAGTAATAGACTTCATCTCGTTA
GAGAAATTTAATATCAATAGCGAGCAATATTATGCCAACTCTCAAAGTCG
AGCATTTattaaaagtttgatttctgaATTCGATAGGAATTTGATCAAAA
CTGATTTCTATGCTGAACTTTTGAATGTTCATTTGAAAAGTTTAAAGTGC
ATACAAGAGAAAGGTTGCCCTAAGTTTAATTGGCGacaagaaaatgcaaa
aattccCGATCACCCATACGTAGAGATTTTTCTCAAAAGCGATCTTGTGA
CTTTTGTATACAGACATTTCAATAATATTGAAAATGCTAAAGGCTGGTTA
CAAAATTACGCAAGAACGATTGATTACAGTGGTTACTGGCGACAACAAAA
TTACCGTTTTACTGGCATTGCTAGAGAAAATCAAGGTGTAGTGGAAGTGG
TTTTACAAAAAGGAAGAGGTGTTTACAAAATAATCcaggaaaaatatttc
aacttgGCGTCATTGATTGAACAGCTTGAAGTGAAATTACGAAATTTTCC
TCGTATTCATTCCAAACTTCGTTCGTTGAAAAGACCTTTGAAAATTAAGG
ATGACGAATCCCCAATTCCAAGGAAAGCCCAAACAATCCGTGAAGAGTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_039431	XLOC_039431	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00062946-exon-scaffold_375-1491911889:36880..37110	TCONS_00062946-exon-scaffold_375-1491911889:36880..37110	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1510915933:36880..37110	TCONS_00062946-exon-scaffold_375-1510915933:36880..37110	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1575043694:36880..37110	TCONS_00062946-exon-scaffold_375-1575043694:36880..37110	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1491911889:37855..37962	TCONS_00062946-exon-scaffold_375-1491911889:37855..37962	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1510915933:37855..37962	TCONS_00062946-exon-scaffold_375-1510915933:37855..37962	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1575043694:37855..37962	TCONS_00062946-exon-scaffold_375-1575043694:37855..37962	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1491911889:38154..38373	TCONS_00062946-exon-scaffold_375-1491911889:38154..38373	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1510915933:38154..38373	TCONS_00062946-exon-scaffold_375-1510915933:38154..38373	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1575043694:38154..38373	TCONS_00062946-exon-scaffold_375-1575043694:38154..38373	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1491911889:38632..41079	TCONS_00062946-exon-scaffold_375-1491911889:38632..41079	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1510915933:38632..41079	TCONS_00062946-exon-scaffold_375-1510915933:38632..41079	Clytia hemisphaerica	exon
TCONS_00062946-exon-scaffold_375-1575043694:38632..41079	TCONS_00062946-exon-scaffold_375-1575043694:38632..41079	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00062946-protein	TCONS_00062946-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_375	supercontig	scaffold_375:36880..41079 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.18429	4.27818	1.90943	1.32029	1.19695	0.932332	2.31485	1.98399	1.32493	1.5882	1.37454	1.25824	1.76247	1.156	2.18158	1.94711	2.68424	2.78053	0.943515	0.747542	1.80214	1.95537	6.83299	6.37079	2.85886	4.45898	1.40829	0.853539	5.36199	6.20862

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00062946 vs. Swiss-Prot (Human)

BLAST of TCONS_00062946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00062946 (transcript) - C. hemisphaerica