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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062882 ID=TCONS_00062882|Name=TCONS_00062882|organism=Clytia hemisphaerica|type=transcript|length=3611bp
CTTGCTTGTCCGAGGCTCGAGCGTCGAGCAGTCGATGgtAAAAACAAAGA
GTGTCTATGAAAAAATGGCAATGAAGTCAGTAAATATCAGCGTTGAGCGA
TTGCTAGAGCAAGAGGTTGAAGTTATTGGACGAGACGGAGAAGAAAAATA
CATCAAGCCATTTGACTTTTCAGAAGAGTTGACATACCTTGCTGGTAAAA
TCGACTTTTATGAAGGAATTGATGGCCATACGGCAGCTGAGGAGGAAGAG
AATGAAGAGGAGGAAGAGTCGCTGGAAGAAGGggccaaaaaagaaaatga
ttcaaaacaagaaaacgaATGGCCATGGTCCTCTGTACACTCCAAATTAA
GATTAGCATTAACTGAAATGTGTGTTATGCTTGACGTTttacaaactttg
aataaaaggaaatattttatccTTGCCCCGATTCAACAAAACCCAGAGCT
TGAGAAACAAACAGTGCAAATGTTGGAGAAGCGAAAATATTTAGCAAAGG
TTGGTTCGTACATTGGAACTGGTGCGGCCGGCCTTGGTATGCAGCGACAT
GTGAAACCCGAACCTATTATTATCGATAGTGATCCAACCCAAGAGAAAGA
GATTGAGTATTACACTCAACTTATGGAACTGAGACAGTTTTGGCGTGTCA
AAAAGTCAGGCAATCAAATCACAGGTGACTTGAGTTATCGTACCTCAGGC
TCAAGGTTTTGGCATCCAGGGATTTTTGAAGTGAAAGCTGAAAGCGATGA
AGCAGAAACAGAAGAAGAGGAGAAAGAAGAGAAGAAACTCGCCATCACGT
TGAGTCCAGATTTAGTTAAAAGCTCTCATATCATTGTTCAACTCATTGAC
AAAGAGAGTCGTTGTGGTTGGAAAGCTGTTTCCCACCCCATCATTCTGGA
GGATAATTTCGTTAATTCTTGGGAAAAAGAAATGACCAAAGCTCAGCAAC
ACCTTTTCAATAAAGAGATTTTCTCTCAACTCTCGAACGATGCTTTTCAA
GGATCTTTCTTGGGTATCAATGTGTTGAACTCTCAAATTAGATGTACCAT
GTCAGATAACGCTGAAGTTATCATCACACACAACGTAGACTCGGCAACTA
CCGATGATTTGCAAACTGAAACAAAGGAAACCTCGAATGACCTTGCTCTA
TTATTGAGTGCCCTGCTTTACCAGCAACATCGAAATGTATCGAAATTCTC
GACACCTTATCCTGCAACTTCGAATTTTTACGGGAAACAAAGCAAATCAT
CAAGCGTCATCAACATCATTCACCGAAAACCAAACGATCTGGGAAAGTCA
ATTTTGTACGAGTTTATGAAACAAGCAGAACATAAACTCTGGATCCATCG
AATCAACGAGTTTTTGTATAATCAGAATGTAAGGTTTCCAGAGCCATCCA
TCGGCTTTCATTGGAATGTATTGAAATCTAGGTTAAAATCCATGTTAACA
GTCACGTTGTCCACTGTTCACCGTCACAAGTCCATCTCCTCCAATTTCGC
CATTACTGTCGATGAAACAGGCTTCCATATTTCCAGTAGAAATATGATAA
GTGTTGATCTTCCGTTTGATATGGATATGTTGGCGCTTGTTTTGAGCAAC
AACGTATACAAGCATCTCCAAAGTGTTGTTCAGGATGTTTCCAGGCAGCA
TGGTTGGATCATGATCACTCCCAAGATGGGAAATAACATCCTATCCTCAA
ACCAGGTGCAAGCTCGACCACCTCTACTGTTGAGAAATGACACTAATGAG
AAATTTGTGCAAATTTACCTCAATGACATGAGAAATATTGAagttgaaat
ttcaaaagagaGACAAGGGAATGATATCACGTTAGATGACGGATTCAAGC
TTttgaacaaagaaaaactttctGTTTCTTGGGCTTTGTTACCAGGTGAC
AGCTTTATGGAAAAGTGTGaatttttattcttatttttataatatttaac
ttgtttataaaattattttttgcgcACTATCAGGGCCCTATCGTATAAAC
CAACGAAAATTCAAAACTCGAAATTCGATGctggatttcaaaaattttcc
ccgaaactTTGATCCAAATTAAATTACGAGAGTTTATTATGACCCAGTAT
TTCGTAATTTTGAAATCCTGAAAGATGTCCCCTCTCGAAAAATCTTTAAG
AAGGAGTGTAAGATGTGGtagtattttttacttttaacatAATTTCTTGT
ATGTAGGAGTCCGAcgagtgtgattttttttgtgccTTGCGTGCTTTCGT
GCccttcgtgcctttgaaaaaaaagttcgtgcctttcttttaaaaaaaag
ttcgtgcctttgcaaaaaaagttcgtgcctttgaaaaaaaagttcgtgcc
tttcgaaaaaaagttcgtgccttttgaaataaagttcgtgcctttcgaaa
aaaagctcgtgcctttcgaaaaaaagttcgtgccttttgaaaatagttaa
tGACAAACAAAATAACCAGAAGCTTCATTAGGTTAAAAAACTTAGATGgg
cagggggggggtcagtactaaaatgtaagacatacatgagtactaaaagg
attttcgctaatttttgacataccccacctatttttcgaaaatgttattt
tagtacacatgtactaaaattattttgagcaatttaacatagataccacc
aattttttgcccttttacggctttaaatttaccaaaatggggtcattgtt
acaaacatagtcgaatttagtgcatcaatctgcaaaataatataatttta
ttactaaactgtgctgaactgtacataaaaaaattttaaaaaatatttaa
aaaatttgaaaaattctgaaagatttctgaagattttttcgaaaattcct
gaaaaaaaattaaattttttccaaaattgttaaaaaaatgctccattttg
gctgattttagaacaaaatactaagatttttcaaaacgctttttggtatt
ttagtacacatggtactaaaattatttttgagcttttttgcagtaccacc
acgtcactaaatgtagtgatgtctgagattttagtaccgaccccccctga
GATGGGTGGTGATTCAAActacatacacttttttatcaGAACGCCTTTAA
ATCATATAAATAAACTATAAGTAGTTTGAGCAAGCATGGGCGAAAgacac
gaacttttttttcaaaggcatgaactttttttcgaaaggcacgaactttt
tttcgaaaggcacgaactttttttcaaaaggcacgaacttttttcgaaag
gcacgaacttttttcgaaaggcacgaactttttttcgaaaggcacgaact
ttttttcaaaggcacgaacttttctTTCAAGGGCACGAACtctttttcga
aaggcacgaactttttttcgaaaggcacgaactttttttcaaaaggcacg
aagggcacgaaggcacgcaaggcaccaaaaaaaatcacactcgAGTCCGA
CAAGAGTTGTTTTGTAAACGTACGACTACCGATTCGCTTTCCTTTCGATA
TCCTGACATCCTGACTTGTAAGTTTTCCTTTCCACGATTCCCAACgagga
aaaaataagaatagatCAATCAGTCTCTCGAAGGATGGCTctaaagaaaa
ttcgaaaaaaa Run BLAST on NCBI protein sequence of TCONS_00062882-protein >TCONS_00062882-protein ID=TCONS_00062882-protein|Name=TCONS_00062882-protein|organism=Clytia hemisphaerica|type=polypeptide|length=646bp
LLVRGSSVEQSMVKTKSVYEKMAMKSVNISVERLLEQEVEVIGRDGEEKY
IKPFDFSEELTYLAGKIDFYEGIDGHTAAEEEENEEEEESLEEGAKKEND
SKQENEWPWSSVHSKLRLALTEMCVMLDVLQTLNKRKYFILAPIQQNPEL
EKQTVQMLEKRKYLAKVGSYIGTGAAGLGMQRHVKPEPIIIDSDPTQEKE
IEYYTQLMELRQFWRVKKSGNQITGDLSYRTSGSRFWHPGIFEVKAESDE
AETEEEEKEEKKLAITLSPDLVKSSHIIVQLIDKESRCGWKAVSHPIILE
DNFVNSWEKEMTKAQQHLFNKEIFSQLSNDAFQGSFLGINVLNSQIRCTM
SDNAEVIITHNVDSATTDDLQTETKETSNDLALLLSALLYQQHRNVSKFS
TPYPATSNFYGKQSKSSSVINIIHRKPNDLGKSILYEFMKQAEHKLWIHR
INEFLYNQNVRFPEPSIGFHWNVLKSRLKSMLTVTLSTVHRHKSISSNFA
ITVDETGFHISSRNMISVDLPFDMDMLALVLSNNVYKHLQSVVQDVSRQH
GWIMITPKMGNNILSSNQVQARPPLLLRNDTNEKFVQIYLNDMRNIEVEI
SKERQGNDITLDDGFKLLNKEKLSVSWALLPGDSFMEKCEFLFLFL Run BLAST on NCBI transcript from alignment at scaffold_373:3672..16957- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062882 ID=TCONS_00062882|Name=TCONS_00062882|organism=Clytia hemisphaerica|type=transcript|length=13286bp|location=Sequence derived from alignment at scaffold_373:3672..16957- (Clytia hemisphaerica)
CTTGCTTGTCCGAGGCTCGAGCGTCGAGCAGTCGATGGTAAGTTTTTTAG
GAAAGTAGATCTATGATTCTATTGTCTCCTATTTATATTAAATGGGGGAA
TTAAGGAAGGTTTAAGCATTTATGGTTCCAAATTATTTTCTGAACTATCT
GGAATGAAAAGTAGAAAAGTATAATAGTTTCTTCTGTCTCTCGCTCTTAG
TCTGCCATCTGCTCTACCCCAAAATCACCTGTTTGGGTGTTGGGGGCAAT
GAATGATTATGATTAAGCATTAAGATTTGCTCTGGGTTTTCTACTGGAGA
GGATAGAGTTTCAGTGGAATCTTAGTCTGGAAAGTTAAAACATCCAAAAA
CGTCAAAACCAAATCACATCATCACATTATACATTATATTATAAGATGTT
CACCGCTATACCTTTTCGCCTTTCCATCCACCATCATCATAAATTGTATG
AAAAAATAAAGGAACGAAAAAGATGTGGTTGGATTTAGTTGGAAAATATG
CAATAAACATATGCAAGTTTACACAAAGATTAAAAAGACAACAAAGCATC
TTATAAAGAATCATTAGAACAATAAAAGATGGAATTTCTTAATCCAAAAA
GAAATATTTACAGAACAACAAAAGTCTTTTTTTAGAAATTTGTTCTTAAA
GACATTGCATATTCTGTTTTCATACCAAAAAATTCCACCAAGACGGAGTA
CACACATTAAACTTTCAAAACACGCAAACTGAAAGGAGTAATTATGACGT
TCCGTGAGATTGGGTAACTTGCATCAGTAGAGGCTAACATGCATAGCCCT
CAAATCAAATGAATGACCTGACTGGTCATAGACCTTTTTTCAATGAGGCC
ACCCTGTTGGATAATTATGTAGTCCAGCAGAAAAACAATGATAAAACCAT
GCATAATTATTACAATATGCATGATACAGTAATCTGGTAATTATGCATGG
CTCTATCATTGTTTTTATGGATGGACTACATAATTATTCAACAGGACGTC
CTCTTTGAAAAAAGGTCAGTTAGGGAAACCATCCAGGATCATGCCATTCT
ATAAGCCAGCAAAAACTAAATGACACTTGTAAATTTAAGTTTCTTACCAT
TTTCCATCGAAAACAACCAAAAACATTGCTACTTCCCAAAGCCGGAGACC
AAAACAAATTATCTTGCAAGATTATGGCGCCCTTTTAGATCTATTGTTAA
GGCCATCTAAAATGGTGGAAAGAGTTGTGGAAAGACAAAGGCGCTCGCTG
CGTCTAGGGTGGTAACGCCAAAACGCCCAATATGATCTTCCAACAGAAGG
CGAGTCAGTTGCCGCGCGAGTTACGTCATGCACTCCACCGCAGCGCATAA
CGAAGCGTGTTTAAATGAATATCATTAATTATAAGAATATCTTATGTGCT
TACTTTCAGTAAACTTCGAGTGCTTCATTAAAGATGAAGAAGGTAAGAAG
ATAAAAAATGCGCTGGATAATTTTCATTGTAACAATTTGATCAATCATCG
CTGAAAGTTTGAAAAAGTTTTTCTGAGGCAAAAGAAATTGTCAGCCAATT
AAAAGCACAGTGTGCTTATACTTACTATGTTTGCTACATTGTCTAGGATA
AAAAAAGTGCGAAAAGACACGAACGCCATTTTTTATTGAGTGACGTTATG
ATTTTTTTGATTGCCGCCGCATACAGGAACTCGCCAAATGTTCCTAACTG
AAGGTCTATTAAAAAGCGCCAGGTTATTTTTTCATGAATCCCTTTAGAAG
TTTTGCGGCGCATTTGTTTGCTTGCGAGTCAAGTAAACGATATAGCGCTT
TCGCAGCATTAATCTTTGATACGCATTTTGGCGGGACGCTAGTGTGACTA
ACTGTCTACTCAGTCAGGGCCTCCTTTAGTCTTTTATAACATTAGTTTGG
ATAGAATAAAAACATACCTGATCAACACAACCAAACCTTCTGTCTTGCGC
TTACTCTTTCCTTCCCAACAACTTTCATTTTTGGTTATGTAGTTTTTAAA
ATCCACAAGTAATGAACCTCTTATAGCTTTATCTGAATAAATCTGGTTGA
AAACAAAGATTACCGCTTGGGCTAATAACGGACAAAGGTTATTTGAAGAT
ATTTTAAGTTATAATTCGAGGTAGAACAAACTAAACATAGAGAGGGGGTA
TTTTTTAGTGCTCTATATACGATGATCGGTATTTTTTTTGAATTCTATGT
TTAGATTTTTCTACCCAGCCCGGTTGCTATGTACGCGCGCTCTGTTGCTT
CGACGTTTGTTTGAAATCGAAAGCAAAACCAAAATAATTTAGCACACACT
GCCGTTTGCGTAATATAAAAAAAATGAAAGGAGGCCCTGACTGGCTCTAC
TCTACCATTTTTGTTTTGATTTAACTTTGTATTTTAATGACCAGCCAGGT
CTTTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCA
ATCTCACGGTCACACATTCAGCAGGTTCAGATCAATGTTTTGATTTGATC
GTTTGGCAGCTTTCTATTCCCAGGAGAATAATTTACCGCCAGAATAAGGA
TTATATTTGTACCTTTGCGGGTGATATTTCAGCTTGATTTTATGTCTAAT
GTTATGGTTTTATGAAGTGCTTGTTCTAATAGATGAGCAAATTCTAGTTT
TCAAAAGAAGCAAATTTAATCTTTCTGCTACAAGATTACACTTTAATATA
ATGCTAATTATGCATGTAAGTTTTATATTAATACTTTCTTTTTGCATATG
TTTTGCATACTTTCTAAGGGAATTTCACCACAGCAATTTGGCCACCATAA
TTTTTGCATACAATTCAATATGGCAGATTATAATCATTAGAACGATAAAA
AATGGAATTTCCTGGGAGGGGGGGTTACTTAGGCAAAAATGGATGATGGG
TATGTGCGGACGGTAAGGGTCGGTCTCTCTAAGGGTCGGAAAAATCAGAA
AGTTTTAAAGTAGTCTCTCTAAGGGTTGGAAAATTCAGGATTTTTAGGAA
ATTTTTGATTTCCAGAGAAAAATTGTAATAAAGTCTCTCTAAGGGTACAA
CTTTTTTCAAAAATCGAAAAAAAAATTATAAAAATAGTCTCTCTAAGGGT
CACCTTTTCAGCAAAAATCTGTCTCTCTAAGGGTCGGTTTTCAGAGGTCC
CGTCCGCACATACCCCTCATTCGCCAACCCTAGTACCCCCCCCCCCGGGG
GGATTTTTTAAAATAACAAAAAAAATTTAAAAAAAAAAAACCCCCCGGGG
GGGGGGAACTAGGGTTGGCGAATGAGGGGTATTCCCCCCCCCCCCGGGGG
AATTTCTTAATCCAAAAAGAAATATTTACAGAACAACAAAAGCCTTTAAG
AAATTTGTTCATGAAGACTGAGCATATTCCGTTTTCGTGCCATTAAAAAA
TTCCTCGAAGACGGAGTACACACATCAAACTTTCAAAACATGCAAACTGA
AAGCATTAAGTACACAATTTTTCCCGTGCAAGAAAATATTAAAACCCCCG
TTTTGATATACAAGGTCAAGCCCAACACGTTAGTAAAAGCTGCTGTAAAT
CAGGGGGTTCAGATCTATGTTTTGATTTGATCATTTTGTGGTTGTATTCC
CAGGAGAATATATTCCCGTCAACCGAATAAGGATTATTTTTGTACCTTCA
ATGGTGATTTTTCCCCTTGAGTTTATGTCTAATTTTATGGTTTCTCGAAG
TACTTGTTCTAAGAGATGAGCAATAAGATGATTATTGTTTGTTTTCAAGA
GAAGCAAATTTAATCTTTTTTCTACAAGATTGCACTTGAATATATATAAT
GCCAACTATGCATGTAAGTTTTATATTAATAGGTACTTTCTTTTTGCATA
GGCAGATAGGTTTTGCATATTTTCAATGCAATCTTACCACGGCAATTCAG
CCACCATAATTTTTGCATACAATTCAATAATGGCGGATGGAAAGGTGAAA
AGATCTAATAATCTGTGGGTACCCCACCAGCCATTAGGTGAATGCGTAGA
TGGGCTTTTTCGGTTGCTTGACCAAACATACCTAACCAATTGATAAAATC
GATAAAATAATTTTAATCCATTATTTGAATAATGATTGAAAATGATAATT
GATAGAAGGGATGACACATACAGTACATACCATACCCATCTTGCCACATG
GTAAACGTCTTAATAATGTTAAAGGGAGTAGGGGTTTTTTACCTTGACAT
TTTTTTATATCTGGTATATAAAATATTGAAATAGGGGATTTGGAAGCTTT
CTCTGTTTGTTTTTTTGCACAAAACACTGTAACTATGGGTGAGCACCCCG
TTGCCAAGATGTTGGCTTGAAATCAAGTGAAAGGGCACTGAAGTTGAAAG
TACAGTAGAATTGGCCTGCACTCCAAATATCGTAATTTTGATATAGGAGT
TTTAGTCTTACTGTCTATGGAACTTGTCGAACCGATCCACCTACTAATCA
AACTCCATTAAATTAAATTTTGATTGAAAAGATTATATAATGGAACTCTC
AGATTTCTTAAAAAATGGTGAGATGTTACATGTTCAATCATAATGGATTG
TGGTTCGATCAGTTCAACTAAGCCAATTTTGCTTGACAAGTTCGTTCCAC
TCTGCAGAATAGCAGCTTCTGTTTCCAAAGCCAAATTATGAATTTAATTC
GGAATATTATATATTTCTGATAACCGATTATGCACTTTAATCCTCTGTAT
TCTTTCAACACCATCATCAGGGCGGTTATACGTTGGGGTGTAGTATTCCA
TGTGGCTCCTGCGGGTTAAATCACAACAGAGAGGCTGCAGACTTTATTCT
GCTCTGGATGAATAGATATTTTGTTACTCTTAGGTTCCAAATAAACGGGG
GGGTTCGAATAAACGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGAAAAATTAACAAGCG
GGGGGGCCCGTTTATTTGGAACCTAAGAGTAACCTTAAGTCTGGAACTGT
GGGAATAGTAGTCACATGTTGGGATAAAACTTTGTCTGTCAGAAATATAA
GATTGGATATCATTAAACTAATCAAACTATTTACTGACCTATTTATAACT
ATTTTATTTCTTTTACAGTAAATGGAACTTTAAAATTGTCTGATGATGAT
GAAGTTTGATAATTTTGATTGTTCGATTGATCGGGTCTGGTATTATTTTA
AACGGACTGTCAACATGGTCCTGGGATCTCACCATACAGCCCTCTTTTTT
ATAAATGGGGCTGTGTCTCTGTTTTATGGTCGAGGAGATAACAACATATT
CCTGCAAACCAATAGGAAAGAGGCTTGAAGATTATCTCCATCGCATCATA
TTTTCAAATTGAATTCTTCTGTAAAACAATGCAAATATCAATAGTGGAAG
TAAAGATGGTGATTGAAGTAGCCTTGATTTAGTTTCTAAACTTGAAGTTC
TAGGAAGGGGGTAGGGGTCAATAGCCTCAAAATGATGTTTGGATGTCACC
ACTAATTGATACTCTCAATTTTTAGCACTCAATTGAAATTAAAGCCATTC
CTAATATAGATTAACAAAAAAAAGATGACATACAAAAAGACTAGCCGTCT
CAGCGTTGACCAAAAAAACTCTTTACCATGATAATTAAGCTTGCTTTGCT
TGCTGTCATTATTGAGAAATCAAATGTATTTCTTACAGTACTTACGATTA
TGTGTATTTTCCAAGGAAAATTAACAACAATATTTTCTTTTATATTGCAT
GGATTAAAATATGACATTGATTAAAATATTTTCCTGTATTTTCCTAGGAA
AATTAGATAAAACATTATTCTTGAAACAACCTAAAGCAAATTCTTATATT
TTCAAGGAAAATTGACCAATACAATTCCTTGTATTTTCCAAGGAAAAAAA
ATACATATAAAAGATGAGTTTAATCTGTAAAATTATCTAAATAATTTTTC
GCTTCTTTCACCAAGCTGATTTTTCAAATACAGTAAAAACAGGGGGGAGT
ACAGACACAGGGTACTGATCCATAGCCAGGTGGTGGTGTCTATTTTTGCA
TTTCAAAAAAGTTAGTACCCGGTACTACTTTGGGGGTGGGGGTGTGTGTT
TTTCACTTTTCAAGCAAGTACAGGATACTATTTGGGTACTTTTTCACAGA
ATTTTGCTGTCTTTCAATAAAAAAAGTAGTTTGTTGTAATATTTGGACTT
TTTTCAAATATTAATTTTTTTGATTTGAAATCTTCTTAATCGACAAATCT
TTTTTACTCTTTGAGAAATTTTTTGATTTTTTTGAAGACCAAACGTCCGA
AATGGTCAAGAAGTGTGTGATGAAAATCAAAGGACAAAAGCTTCTGACTC
CATCATTGATAGTTTGCTTGAATTATCTGTCAATTTTCAGTCTGAAAAAC
TAACAATAGTACCCCTCTCTTGGTCTAATCTGTAAAATTTAAGATTTTAG
GGGTAGTGTCCCTTTTTTTACAGCAAAAATGAAGTAGTACCCGGTACTAA
ATATGGGTGGGTGGTATTAAACAAAATTTTAGTAAAAAATCAAGTTAGTA
CCCTATGGGTTAGTACCCTGCCTCTGTACCCCCCACCCCCTGGTAAAAAA
TGGTAGGGTTATTATGAAAGCAAATCGAATTTAAACTGCCTTTTTCTTTA
ATCTAGTGACAAGGAAAGAACATCTTGCACTATAAATACTACCACTTGTA
AAACTAATCTTATGCTAGGAATAGTTCAGCCATCGTGGCTAGCCAAGGGT
GACTTTGAAAGACTTTGAATAACTTTGAAAATTTGAAAATTAGTTATTCA
GATATCAAAGGGCTCTTGAAAATGTTCAAAAATGAAGATTAGAAAAAGGA
AAAAAAAATGTTTTCACAGCTTTCAATTTAAGGCTGAAAATTGACCAATT
GAAAGATCGATACAGAAAAGGCACCAAAAAGAAATGCTATCCACTTAAAA
ATCGCTAGCGAAAAGCTTTTTTGGCGGTTTTTTAGCTCTCTCGATTGAAA
TGACAAGATTATTATAGCCTTATAGCCTCCATTTAAGACAAATTGGACAC
GGGGCTGAATTCAAAAAGTTTTTAGTAACAACAAGGGATTTAACTCGAAA
AACTGAAAAACATATACAGACGTTTATCACCTGCCTTTATTGTCAGGCAC
TAAACACTCAAAAATGTCTTGATTGTCAAAAGGGACTAAGTGGGTGAGTA
ACAAGTCATCAAGCCTCTTCAAATATGAGTGTGACCACCTTCCTTCAGTG
AAAACCAAATGAAAGGTAAATTATCAGGGACCAAATTGTTTAGAAAAAAC
TACCTTGAATTCCATTCCTCTGTAACTAGTAGTTTTATTGAGTCTTGTCA
CTGCATATAGAAGAATGCTGACACAAGGTCTAAACAAAGCAGGACTACAG
AGAGTCTTGAAAAAACTTGTTGTAGTCTTTGATATTTTTTAAGATCCATA
TCTATCATTGTGGTGCTTCAAAAAGGATTGTTTAAATGGTGGGTTAGTTG
AAAGTTTTAAAAGAAAATACTTCTGAAAGTAAAATGACATTTGTAGAGAA
TTTTATGTATTTTTTTTCAAGGAAGATGGTTACGTATTTTTGAAGGAAAA
AGTAGCCAGGATGCAGGATGTTAAGTATGAGGCATCGTCTTGTTTTTTAA
GTTTCAAGAAAAGTTGCATCTTTTGTCAATCAGTTACTCTACCTCGTTTT
GTTGTCTTGGCCATGTTTTTTAAGAAGTAGTTTACTCCTTCCCTCCCAAA
AGAATTGCTTCATTATCTTTTTTAAAACTGTCCTTGGAGACTTGTCCTTG
TACTTTTGATGGAAGATGATTTTGTGTGTTTCCTTAGAATAATATGAATT
AAATTTAGTAAATCTAAATGCTTTTGGGCTGCTCTGGTGAAGGGAAATGG
TATTTTGCATTTTACCCATGAAAATAGCCTTGTACTTTTGAAGCAAACGT
ATCATGAAGGTAGAGGATCCAGCTAGGGTGCGCAAGGTTATTATGAGCTC
GATCCCCAGCTGGGTCATACCAAAGATTCCCAAAATGGTACTTAATGCCT
CTCTGCTTGATGCTCAAGTAACTAAAGAGCAGATCAAGGGTAAGTGGAGA
AATCCAGGGAAAGGAGTGGTGCCCTCCCCTACCTTCGGGTAGACAGCTAG
AGAAAACGGATCCTTCGGGTCACCCTCAACTGCAGTCGCAAACTTACTTA
CTTTTGAACAAAAATGATTGTGTTTTCAGGAAACTTACACTTTGTATTTT
TAAAGGAAAATAGCTTTGAGTACAGTGCTGCAGGTTGAAATTCTTTTGGT
TTTACTAGGGGAGGGTTTAATTTTCTTTTTTTTTCCTTGACATCAAATAA
TAATGTACACATAGTTATAACAGGGGCAGCAGGGGCTTAAAGCAGTTGGT
TCACAGACATCACAATGACTAACTGCAAAATTGAAAATTTGAAAATTCGC
CAATCACCTAAGGCAGCTAGCACCTCAAGTCAAAGTAATAAGTGCATTTG
ACTATTGGTAGGTTGATACCACCCCCTATTCGGTCATGTTTTGTGGTCCT
GAGTTTATCACTATTTGAATATGGAAGTCCTCGGGTTGGGAATATTCTTG
GTAACCTCTCCTTCTTTGATCTAAATACAGAGCCGAATATATAATGAGGT
CAAAAGCTTCTAAAATAAAATAAAAACCTTTCCAACAGATTAAGTTTAAA
TCACTACATATCAATTGGGTAAAAGTAATGTACAGTTTGATTGGATAAAT
TTAAGGTAAAGTACCCTAACGGGGATATGCTTTTTAAGACTAGACCGGGA
GTTCTTTAAAAGCTGATAAGTCCTTGAAATGAACCAGAGTAAACTGTTAT
GAGATCATCTACTATTAGTCATAGCATAGACATGCCTAGTGTCTTGTAAC
ATATATATGAATGTTTTGTACAAAATTATTCTTAGTACTCTCAGCAAATC
TCGGTTTTTTGAGTCTCAAAAGAATTAAAAATCTGAAAAAATTAAAAAAT
GTAGGTGCCCTTATCAAAAATTGTTACGTCGGGGGTACGAGAATTGGCGA
GACTTGAAGACTCCTCAAACTTCCTCTACAAATCCTTTTGTATAAAGCTT
CAATGAAAAGGGAACTCGTGTTTAGAAAATTTAGATTTATCAGTTTTCTA
GATGGAACAATGCAATTTGAAAGTCACCATGCAATTTAATTATCTATTTT
TCCTTTTTTAAGGTAAAAACAAAGAGTGTCTATGAAAAAATGGCAATGAA
GTCAGTAAATATCAGCGTTGAGCGATTGCTAGAGCAAGAGGTTGAAGTTA
TTGGACGAGACGGAGAAGAAAAATACATCAAGCCATTTGACTTTTCAGAA
GAGTTGACATACCTTGCTGGTAAAATCGACTTTTATGAAGGAATTGATGG
CCATACGGCAGCTGAGGAGGAAGAGAATGAAGAGGAGGAAGAGTCGCTGG
AAGAAGGGGCCAAAAAAGAAAATGATTCAAAACAAGAAAACGAATGGCCA
TGGTCCTCTGTACACTCCAAATTAAGATTAGCATTAACTGAAATGTGTGT
TATGCTTGACGTTTTACAAACTTTGAATAAAAGGAAATATTTTATCCTTG
CCCCGATTCAACAAAACCCAGAGCTTGAGAAACAAACAGTGCAAATGTTG
GAGAAGCGAAAATATTTAGCAAAGGTTGGTTCGTACATTGGAACTGGTGC
GGCCGGCCTTGGTATGCAGCGACATGTGAAACCCGAACCTATTATTATCG
ATAGTGATCCAACCCAAGAGAAAGAGATTGAGTATTACACTCAACTTATG
GAACTGAGACAGTTTTGGCGTGTCAAAAAGTCAGGCAATCAAATCACAGG
TGACTTGAGTTATCGTACCTCAGGCTCAAGGTTTTGGCATCCAGGGATTT
TTGAAGTGAAAGCTGAAAGCGATGAAGCAGAAACAGAAGAAGAGGAGAAA
GAAGAGAAGAAACTCGCCATCACGTTGAGTCCAGATTTAGTTAAAAGCTC
TCATATCATTGTTCAACTCATTGACAAAGAGAGTCGTTGTGGTTGGAAAG
CTGTTTCCCACCCCATCATTCTGGAGGATAATTTCGTTAATTCTTGGGAA
AAAGAAATGACCAAAGCTCAGCAACACCTTTTCAATAAAGAGATTTTCTC
TCAACTCTCGAACGATGCTTTTCAAGGATCTTTCTTGGGTATCAATGTGT
TGAACTCTCAAATTAGATGTACCATGTCAGATAACGCTGAAGTTATCATC
ACACACAACGTAGACTCGGCAACTACCGATGATTTGCAAACTGAAACAAA
GGAAACCTCGAATGACCTTGCTCTATTATTGAGTGCCCTGCTTTACCAGC
AACATCGAAATGTATCGAAATTCTCGACACCTTATCCTGCAACTTCGAAT
TTTTACGGGAAACAAAGCAAATCATCAAGCGTCATCAACATCATTCACCG
AAAACCAAACGATCTGGGAAAGTCAATTTTGTACGAGTTTATGAAACAAG
CAGAACATAAACTCTGGATCCATCGAATCAACGAGTTTTTGTATAATCAG
AATGTAAGGTTTCCAGAGCCATCCATCGGCTTTCATTGGAATGTATTGAA
ATCTAGGTTAAAATCCATGTTAACAGTCACGTTGTCCACTGTTCACCGTC
ACAAGTCCATCTCCTCCAATTTCGCCATTACTGTCGATGAAACAGGCTTC
CATATTTCCAGTAGAAATATGATAAGTGTTGATCTTCCGTTTGATATGGA
TATGTTGGCGCTTGTTTTGAGCAACAACGTATACAAGCATCTCCAAAGTG
TTGTTCAGGATGTTTCCAGGCAGCATGGTTGGATCATGATCACTCCCAAG
ATGGGAAATAACATCCTATCCTCAAACCAGGTGCAAGCTCGACCACCTCT
ACTGTTGAGAAATGACACTAATGAGAAATTTGTGCAAATTTACCTCAATG
ACATGAGAAATATTGAAGTTGAAATTTCAAAAGAGAGACAAGGGAATGAT
ATCACGTTAGATGACGGATTCAAGCTTTTGAACAAAGAAAAACTTTCTGT
TTCTTGGGCTTTGTTACCAGGTGACAGCTTTATGGAAAAGTGTGAATTTT
TATTCTTATTTTTATAATATTTAACTTGTTTATAAAATTATTTTTTGCGC
ACTATCAGGGCCCTATCGTATAAACCAACGAAAATTCAAAACTCGAAATT
CGATGCTGGATTTCAAAAATTTTCCCCGAAACTTTGATCCAAATTAAATT
ACGAGAGTTTATTATGACCCAGTATTTCGTAATTTTGAAATCCTGAAAGA
TGTCCCCTCTCGAAAAATCTTTAAGAAGGAGTGTAAGATGTGGTAGTATT
TTTTACTTTTAACATAATTTCTTGTATGTAGGAGTCCGACGAGTGTGATT
TTTTTTGTGCCTTGCGTGCTTTCGTGCCCTTCGTGCCTTTGAAAAAAAAG
TTCGTGCCTTTCTTTTAAAAAAAAGTTCGTGCCTTTGCAAAAAAAGTTCG
TGCCTTTGAAAAAAAAGTTCGTGCCTTTCGAAAAAAAGTTCGTGCCTTTT
GAAATAAAGTTCGTGCCTTTCGAAAAAAAGCTCGTGCCTTTCGAAAAAAA
GTTCGTGCCTTTTGAAAATAGTTAATGACAAACAAAATAACCAGAAGCTT
CATTAGGTTAAAAAACTTAGATGGGCAGGGGGGGGGTCAGTACTAAAATG
TAAGACATACATGAGTACTAAAAGGATTTTCGCTAATTTTTGACATACCC
CACCTATTTTTCGAAAATGTTATTTTAGTACACATGTACTAAAATTATTT
TGAGCAATTTAACATAGATACCACCAATTTTTTGCCCTTTTACGGCTTTA
AATTTACCAAAATGGGGTCATTGTTACAAACATAGTCGAATTTAGTGCAT
CAATCTGCAAAATAATATAATTTTATTACTAAACTGTGCTGAACTGTACA
TAAAAAAATTTTAAAAAATATTTAAAAAATTTGAAAAATTCTGAAAGATT
TCTGAAGATTTTTTCGAAAATTCCTGAAAAAAAATTAAATTTTTTCCAAA
ATTGTTAAAAAAATGCTCCATTTTGGCTGATTTTAGAACAAAATACTAAG
ATTTTTCAAAACGCTTTTTGGTATTTTAGTACACATGGTACTAAAATTAT
TTTTGAGCTTTTTTGCAGTACCACCACGTCACTAAATGTAGTGATGTCTG
AGATTTTAGTACCGACCCCCCCTGAGATGGGTGGTGATTCAAACTACATA
CACTTTTTTATCAGAACGCCTTTAAATCATATAAATAAACTATAAGTAGT
TTGAGCAAGCATGGGCGAAAGACACGAACTTTTTTTTCAAAGGCATGAAC
TTTTTTTCGAAAGGCACGAACTTTTTTTCGAAAGGCACGAACTTTTTTTC
AAAAGGCACGAACTTTTTTCGAAAGGCACGAACTTTTTTCGAAAGGCACG
AACTTTTTTTCGAAAGGCACGAACTTTTTTTCAAAGGCACGAACTTTTCT
TTCAAGGGCACGAACTCTTTTTCGAAAGGCACGAACTTTTTTTCGAAAGG
CACGAACTTTTTTTCAAAAGGCACGAAGGGCACGAAGGCACGCAAGGCAC
CAAAAAAAATCACACTCGAGTCCGACAAGAGTTGTTTTGTAAACGTACGA
CTACCGATTCGCTTTCCTTTCGATATCCTGACATCCTGACTTGTAAGTTT
TCCTTTCCACGATTCCCAACGAGGAAAAAATAAGAATAGATCAATCAGTC
TCTCGAAGGATGGCTCTAAAGAAAATTCGAAAAAAA Coding sequence (CDS) from alignment at scaffold_373:3672..16957- >TCONS_00062882 ID=TCONS_00062882|Name=TCONS_00062882|organism=Clytia hemisphaerica|type=CDS|length=3882bp|location=Sequence derived from alignment at scaffold_373:3672..16957- (Clytia hemisphaerica)
GTAAAAACAAAGAGTGTCTATGAAAAAATGGCAATGAAGTCAGTAAATAT
CAGCGTTGAGCGATTGCTAGAGCAAGAGGTTGAAGTTATTGGACGAGACG
GAGAAGAAAAATACATCAAGCCATTTGACTTTTCAGAAGAGTTGACATAC
CTTGCTGGTAAAATCGACTTTTATGAAGGAATTGATGGCCATACGGCAGC
TGAGGAGGAAGAGAATGAAGAGGAGGAAGAGTCGCTGGAAGAAGGGGCCA
AAAAAGAAAATGATTCAAAACAAGAAAACGAATGGCCATGGTCCTCTGTA
CACTCCAAATTAAGATTAGCATTAACTGAAATGTGTGTTATGCTTGACGT
TTTACAAACTTTGAATAAAAGGAAATATTTTATCCTTGCCCCGATTCAAC
AAAACCCAGAGCTTGAGAAACAAACAGTGCAAATGTTGGAGAAGCGAAAA
TATTTAGCAAAGGTTGGTTCGTACATTGGAACTGGTGCGGCCGGCCTTGG
TATGCAGCGACATGTGAAACCCGAACCTATTATTATCGATAGTGATCCAA
CCCAAGAGAAAGAGATTGAGTATTACACTCAACTTATGGAACTGAGACAG
TTTTGGCGTGTCAAAAAGTCAGGCAATCAAATCACAGGTGACTTGAGTTA
TCGTACCTCAGGCTCAAGGTTTTGGCATCCAGGGATTTTTGAAGTGAAAG
CTGAAAGCGATGAAGCAGAAACAGAAGAAGAGGAGAAAGAAGAGAAGAAA
CTCGCCATCACGTTGAGTCCAGATTTAGTTAAAAGCTCTCATATCATTGT
TCAACTCATTGACAAAGAGAGTCGTTGTGGTTGGAAAGCTGTTTCCCACC
CCATCATTCTGGAGGATAATTTCGTTAATTCTTGGGAAAAAGAAATGACC
AAAGCTCAGCAACACCTTTTCAATAAAGAGATTTTCTCTCAACTCTCGAA
CGATGCTTTTCAAGGATCTTTCTTGGGTATCAATGTGTTGAACTCTCAAA
TTAGATGTACCATGTCAGATAACGCTGAAGTTATCATCACACACAACGTA
GACTCGGCAACTACCGATGATTTGCAAACTGAAACAAAGGAAACCTCGAA
TGACCTTGCTCTATTATTGAGTGCCCTGCTTTACCAGCAACATCGAAATG
TATCGAAATTCTCGACACCTTATCCTGCAACTTCGAATTTTTACGGGAAA
CAAAGCAAATCATCAAGCGTCATCAACATCATTCACCGAAAACCAAACGA
TCTGGGAAAGTCAATTTTGTACGAGTTTATGAAACAAGCAGAACATAAAC
TCTGGATCCATCGAATCAACGAGTTTTTGTATAATCAGAATGTAAGGTTT
CCAGAGCCATCCATCGGCTTTCATTGGAATGTATTGAAATCTAGGTTAAA
ATCCATGTTAACAGTCACGTTGTCCACTGTTCACCGTCACAAGTCCATCT
CCTCCAATTTCGCCATTACTGTCGATGAAACAGGCTTCCATATTTCCAGT
AGAAATATGATAAGTGTTGATCTTCCGTTTGATATGGATATGTTGGCGCT
TGTTTTGAGCAACAACGTATACAAGCATCTCCAAAGTGTTGTTCAGGATG
TTTCCAGGCAGCATGGTTGGATCATGATCACTCCCAAGATGGGAAATAAC
ATCCTATCCTCAAACCAGGTGCAAGCTCGACCACCTCTACTGTTGAGAAA
TGACACTAATGAGAAATTTGTGCAAATTTACCTCAATGACATGAGAAATA
TTGAAGTTGAAATTTCAAAAGAGAGACAAGGGAATGATATCACGTTAGAT
GACGGATTCAAGCTTTTGAACAAAGAAAAACTTTCTGTTTCTTGGGCTTT
GTTACCAGGTGACAGCTTTATGGAAAAGTGTGAATTTTTATTCTTATTTT
TATAATTGCTTGTCCGAGGCTCGAGCGTCGAGCAGTCGATGGTAAAAACA
AAGAGTGTCTATGAAAAAATGGCAATGAAGTCAGTAAATATCAGCGTTGA
GCGATTGCTAGAGCAAGAGGTTGAAGTTATTGGACGAGACGGAGAAGAAA
AATACATCAAGCCATTTGACTTTTCAGAAGAGTTGACATACCTTGCTGGT
AAAATCGACTTTTATGAAGGAATTGATGGCCATACGGCAGCTGAGGAGGA
AGAGAATGAAGAGGAGGAAGAGTCGCTGGAAGAAGGGGCCAAAAAAGAAA
ATGATTCAAAACAAGAAAACGAATGGCCATGGTCCTCTGTACACTCCAAA
TTAAGATTAGCATTAACTGAAATGTGTGTTATGCTTGACGTTTTACAAAC
TTTGAATAAAAGGAAATATTTTATCCTTGCCCCGATTCAACAAAACCCAG
AGCTTGAGAAACAAACAGTGCAAATGTTGGAGAAGCGAAAATATTTAGCA
AAGGTTGGTTCGTACATTGGAACTGGTGCGGCCGGCCTTGGTATGCAGCG
ACATGTGAAACCCGAACCTATTATTATCGATAGTGATCCAACCCAAGAGA
AAGAGATTGAGTATTACACTCAACTTATGGAACTGAGACAGTTTTGGCGT
GTCAAAAAGTCAGGCAATCAAATCACAGGTGACTTGAGTTATCGTACCTC
AGGCTCAAGGTTTTGGCATCCAGGGATTTTTGAAGTGAAAGCTGAAAGCG
ATGAAGCAGAAACAGAAGAAGAGGAGAAAGAAGAGAAGAAACTCGCCATC
ACGTTGAGTCCAGATTTAGTTAAAAGCTCTCATATCATTGTTCAACTCAT
TGACAAAGAGAGTCGTTGTGGTTGGAAAGCTGTTTCCCACCCCATCATTC
TGGAGGATAATTTCGTTAATTCTTGGGAAAAAGAAATGACCAAAGCTCAG
CAACACCTTTTCAATAAAGAGATTTTCTCTCAACTCTCGAACGATGCTTT
TCAAGGATCTTTCTTGGGTATCAATGTGTTGAACTCTCAAATTAGATGTA
CCATGTCAGATAACGCTGAAGTTATCATCACACACAACGTAGACTCGGCA
ACTACCGATGATTTGCAAACTGAAACAAAGGAAACCTCGAATGACCTTGC
TCTATTATTGAGTGCCCTGCTTTACCAGCAACATCGAAATGTATCGAAAT
TCTCGACACCTTATCCTGCAACTTCGAATTTTTACGGGAAACAAAGCAAA
TCATCAAGCGTCATCAACATCATTCACCGAAAACCAAACGATCTGGGAAA
GTCAATTTTGTACGAGTTTATGAAACAAGCAGAACATAAACTCTGGATCC
ATCGAATCAACGAGTTTTTGTATAATCAGAATGTAAGGTTTCCAGAGCCA
TCCATCGGCTTTCATTGGAATGTATTGAAATCTAGGTTAAAATCCATGTT
AACAGTCACGTTGTCCACTGTTCACCGTCACAAGTCCATCTCCTCCAATT
TCGCCATTACTGTCGATGAAACAGGCTTCCATATTTCCAGTAGAAATATG
ATAAGTGTTGATCTTCCGTTTGATATGGATATGTTGGCGCTTGTTTTGAG
CAACAACGTATACAAGCATCTCCAAAGTGTTGTTCAGGATGTTTCCAGGC
AGCATGGTTGGATCATGATCACTCCCAAGATGGGAAATAACATCCTATCC
TCAAACCAGGTGCAAGCTCGACCACCTCTACTGTTGAGAAATGACACTAA
TGAGAAATTTGTGCAAATTTACCTCAATGACATGAGAAATATTGAAGTTG
AAATTTCAAAAGAGAGACAAGGGAATGATATCACGTTAGATGACGGATTC
AAGCTTTTGAACAAAGAAAAACTTTCTGTTTCTTGGGCTTTGTTACCAGG
TGACAGCTTTATGGAAAAGTGTGAATTTTTATTCTTATTTTTATAATTGC
TTGTCCGAGGCTCGAGCGTCGAGCAGTCGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062882-exon-scaffold_373-1575043694:16921..16957 | TCONS_00062882-exon-scaffold_373-1575043694:16921..16957 | Clytia hemisphaerica | exon |
| TCONS_00062882-exon-scaffold_373-1575043694:3672..7245 | TCONS_00062882-exon-scaffold_373-1575043694:3672..7245 | Clytia hemisphaerica | exon |
| TCONS_00062882-exon-scaffold_373-1510915933:16921..16957 | TCONS_00062882-exon-scaffold_373-1510915933:16921..16957 | Clytia hemisphaerica | exon |
| TCONS_00062882-exon-scaffold_373-1510915933:3672..7245 | TCONS_00062882-exon-scaffold_373-1510915933:3672..7245 | Clytia hemisphaerica | exon |
| TCONS_00062882-exon-scaffold_373-1491911889:16921..16957 | TCONS_00062882-exon-scaffold_373-1491911889:16921..16957 | Clytia hemisphaerica | exon |
| TCONS_00062882-exon-scaffold_373-1491911889:3672..7245 | TCONS_00062882-exon-scaffold_373-1491911889:3672..7245 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_373 | supercontig | scaffold_373:3672..16957 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019313 | Mediator_Med17 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0001104 | RNA polymerase II transcription cofactor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription from RNA polymerase II promoter |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
| cellular_component |
GO:0016592 |
mediator complex |
| molecular_function |
GO:0001104 |
RNA polymerase II transcription cofactor activity |
Blast
BLAST of TCONS_00062882 vs. Swiss-Prot (Human)
Match: MED17 (Mediator of RNA polymerase II transcription subunit 17 OS=Homo sapiens GN=MED17 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 5.349e-43 Identity = 149/560 (26.61%), Postives = 261/560 (46.61%), Query Frame = 2
Query: 68 AMKSVNISVERLLEQEVEVIGRDGEEKYIKPFDFSEELTYLAGKIDFYEGIDGHTAAXXXXXXXXXXXXXXGAKKENDSK------QENEWPWSSVHSKLRLALTEMCVMLDVLQTLNKRKYFILAPIQQN---PELEKQTVQMLEKRKYLAKVGSYIGTGAAGLGMQRHVKPEPIIIDSDPTQEKEIEYYTQLMELRQFWRVKKSGNQITGDLSYRTSGSRFWHPGIFXXXXXXXXXXXXXXXXXXXXLAITLSPDLVKSSHIIVQLIDKESRCG----WKAVSHPIILEDNFVNSWEKEMTKAQQHLFNKEIFSQLSNDAFQ-GSFLGINVLNSQI--RCTMSDNAEVIITHNVDSATTDDLQTETKETSNDXXXXXXXXXYQ-----QHRNVSKFSTPYPATSNFYGKQSKSSSVINIIHRKPNDLGKS--ILYEFMKQAEHKLWIHRINEFLYNQNVRFPEPSIGFHWNVLKSRLKSMLTVTLSTVHRH---KSISSNFAITVDETGFHISSRNMISVDLPFDMDMLALVLSNNVYKHLQSVVQDVSRQHGWIMIT 1669
+++V IS+E E++V +G DG E Y+ P S+ L LA +IDF +G + +E G+ + D + Q + WPW SV + LR ALTEMCV+ DVL + +K+ L P+ Q+ P+ QT+Q++ K+K LA + GA L + + + + ++ ++L+ LRQ W+++K G++I GDLSYR++GS F H G FEV +D ++ ++ L + + DL S++I V + + G P+ W+ ++ AQ L KEIF+QLS +A Q S + V+ +QI + S + + H+ + + TE K+ D +L L+ + +S P+PA++ F K+ + S + N L S +L + +KQA+H R + + R +P I HW+ + +S + V +++ KSI I V++ + R+ + L + L L + + +H VQ +++ GW +++
Sbjct: 3 GVRAVRISIESACEKQVHEVGLDGTETYLPPLSMSQNLARLAQRIDFSQGSGSEEEEAAGTEGDAQEWPGAGSSADQDDEEGVVKFQPSLWPWDSVRNNLRSALTEMCVLYDVLSIVRDKKFMTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKS---------VTENQENKLQRDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDLDLDKKIPEDYCPLDVQIPSDLEGSAYIKVSIQKQAPDIGDLGTVNLFKRPLPKSKPGSPHWQTKLEAAQNVLLCKEIFAQLSREAVQIKSQVPHIVVKNQIISQPFPSLQLSISLCHSSNDKKSQKFATE-KQCPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFGHKRMRLSGPQAFDKNEINSLQSSEGLLEKIIKQAKHIFLRSRAAATIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQ--IRVVHRDGRVITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLS 550
The following BLAST results are available for this feature:
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