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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062804 ID=TCONS_00062804|Name=TCONS_00062804|organism=Clytia hemisphaerica|type=transcript|length=935bp
attgccaaatacgaggaattaaccaaaattctcaatatattttgaccgag
attgtatAGTTATACCTAAACTGTGTGAGGAGGCTGGGTTAGAATTTACC
AGGAAGACCAAAATATATAGCCGAAGGTTAGAGACGAATCTCCTTTGTAT
GATTTGAAACCAATTATTCTATTTAAGCTGATACGCGGCCCACATGGTTT
TCAACATATAAAAACCTCAATTTTCTTGCTTGGGAAAGGTTGAAAGTTTG
CTTCTAGTATTCGGCTTGAAGTCAGGGGGAAAGATGTCAAAATAGTTTAT
CATTGAGTGGACAATGCATCTACTACAGACATTTGATGTCAANGCCGCCC
GGGGAGAGGGTCTGGTAAAGTCCTGTACGGGTGCCAACAACCCTCGTAGA
GCTGTCtcttcaacttttcaggacttcggaccccttttttcggaatcttc
acccaaaaaaaaataaagtatcaAAACCTGGCGAAAAACTTTGAAGTTGA
CCCtaacccgattcgaactcgggATCCCTAGAGCAAGAGCACAATGCGCT
ACCATTAGGCTGACTTCTGTTAAtataatttagaaattttaaggGTCTNc
tggaccaagttactcaatgctggccaagaaaaatattatgataagagttt
ttttgaaattggtacccgcagagagagcgctagatctactttcgcTTTTA
CactaatgatgtagcgccgtttgtcctTAGGCAAAGCTTCAAACACTATA
ATGGCTTCATTGCgggtaccaactttcaaaaacttcgatcaaagctggct
agggatatataaaggtcagtgtatTTGACCCCTGTCTGTCAGTTAGAATA
ACAAATAGGGTCAAATGccgtttttgagtatttttgatTGGAAAATATAA
CATAATCTTGACTTAATAagtaagatttaaaaaaa Run BLAST on NCBI transcript from alignment at scaffold_372:42078..43164- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062804 ID=TCONS_00062804|Name=TCONS_00062804|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at scaffold_372:42078..43164- (Clytia hemisphaerica)
ATTGCCAAATACGAGGAATTAACCAAAATTCTCAATATATTTTGACCGAG
ATTGTATAGTTATACCTAAACTGTGTGAGGAGGCTGGGTTAGAATTTACC
AGGAAGACCAAAATATATAGCCGAAGGTTAGAGACGAATCTCCTTTGTAT
GATTTGAAACCAATTATTCTATTTAAGCTGATACGCGGCCCACATGGTTT
TCAACATATAAAAACCTCAATNACAAACCAATTCTGAGGTTTGACTTTGG
TTTTTCTGGCATTTAGAAAAACAACGAGTCTGAAATAAACAAAAAAAATA
AAAAGTTTTGAGTCTGCATTTTATACATCTGACANGGCGGCCCACATGGT
TTTCAACATATAAAAACCTCAATTTTCTTGCTTGGGAAAGGTTGAAAGTT
TGCTTCTAGTATTCGGCTTGAAGTCAGGGGGAAAGATGTCAAAATAGTTT
ATCATTGAGTGGACAATGCATCTACTACAGACATTTGATGTCAANGCCGC
CCGGGGAGAGGGTCTGGTAAAGTCCTGTACGGGTGCCAACAACCCTCGTA
GAGCTGTCTCTTCAACTTTTCAGGACTTCGGACCCCTTTTTTCGGAATCT
TCACCCAAAAAAAAATAAAGTATCAAAACCTGGCGAAAAACTTTGAAGTT
GACCCTAACCCGATTCGAACTCGGGATCCCTAGAGCAAGAGCACAATGCG
CTACCATTAGGCTGACTTCTGTTAATATAATTTAGAAATTTTAAGGGTCT
NCTGGACCAAGTTACTCAATGCTGGCCAAGAAAAATATTATGATAAGAGT
TTTTTTGAAATTGGTACCCGCAGAGAGAGCGCTAGATCTACTTTCGCTTT
TACACTAATGATGTAGCGCCGTTTGTCCTTAGGCAAAGCTTCAAACACTA
TAATGGCTTCATTGCGGGTACCAACTTTCAAAAACTTCGATCAAAGCTGG
CTAGGGATATATAAAGGTCAGTGTATTTGACCCCTGTCTGTCAGTTAGAA
TAACAAATAGGGTCAAATGCCGTTTTTGAGTATTTTTGATTGGAAAATAT
AACATAATCTTGACTTAATAAGTAAGATTTAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062804-exon-scaffold_372-1575043694:42960..43164 | TCONS_00062804-exon-scaffold_372-1575043694:42960..43164 | Clytia hemisphaerica | exon |
| TCONS_00062804-exon-scaffold_372-1575043694:42078..42807 | TCONS_00062804-exon-scaffold_372-1575043694:42078..42807 | Clytia hemisphaerica | exon |
| TCONS_00062804-exon-scaffold_372-1510915933:42960..43164 | TCONS_00062804-exon-scaffold_372-1510915933:42960..43164 | Clytia hemisphaerica | exon |
| TCONS_00062804-exon-scaffold_372-1510915933:42078..42807 | TCONS_00062804-exon-scaffold_372-1510915933:42078..42807 | Clytia hemisphaerica | exon |
| TCONS_00062804-exon-scaffold_372-1491911889:42960..43164 | TCONS_00062804-exon-scaffold_372-1491911889:42960..43164 | Clytia hemisphaerica | exon |
| TCONS_00062804-exon-scaffold_372-1491911889:42078..42807 | TCONS_00062804-exon-scaffold_372-1491911889:42078..42807 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_372 | supercontig | scaffold_372:42078..43164 - |
Blast
The following BLAST results are available for this feature:
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