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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062797 ID=TCONS_00062797|Name=TCONS_00062797|organism=Clytia hemisphaerica|type=transcript|length=910bp
ctaaaacttttggGTGGTTTAGCCTGttatttttaaaggtttcattGGAG
TTCATCCACCCTATTATTTGAGTATCTACAATCGGGCCTTTGAGGTAGTT
GgaaaaatactgaagttgagcctaGTGCGTTGCTTACGTTCAACTATAAA
TATTGCTGAAGTTTGTCCgatttaaaaaaagcttttgaagaAGTCATATC
CACTCATTGTTTTGCTTCTTTTAAAGGCTTTGAAACCTATAATTATCTCA
AAAGTATCACGATTATATTTTTCTCATTCTGTAATTTGAATACTGCGTTG
CGTTACTGAGACCCATAGCGTCAACGACCGCGGTCAGACAGACAATGATT
ATTATGTATTGAATCCAATGCAGCAAAATAGCCCTGGGTAGTCCATGTaa
ggctttttgatagactgtaTGACgcgattaaaattttaaaagggaaAATC
AAATAAGTACCacgtaagaaccgtgtaagGACCAGTTTTTAAAAATCTCA
ACTTTCGAAAACATTTGGGCCAAAAGGTTCAGAGATTTTACTCAGAACCG
TGAAAGGTTTTCACAAgctgaaaatcttaaatcatctgattatcccttta
aaagaGGCATGTCTCTGTCTCGAAATCTAGCAATATTCGATAAAGTATTA
GGAAAGTCTGGACTAATCAGTTGTTTAAAGTATATCTGTCTGGTACAAAA
TTCTAGATACGACCACTGGATATTATGATCATTTCgttcttcttttcttt
caggcttttttcGTTTCATACAAGCCATGTATGTTTTTGGGAATGCAAAG
ATGAGCAAATCAAGTAGAGCACAGCTCTTAGATCAACTTCAAGAAAGGTG
AGATTTCTATGACAACAGTTAGGAAGATTAACTCTAAATTTAATTCCTTT
TTAAAAGCTA Run BLAST on NCBI transcript from alignment at scaffold_372:232156..233065+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062797 ID=TCONS_00062797|Name=TCONS_00062797|organism=Clytia hemisphaerica|type=transcript|length=910bp|location=Sequence derived from alignment at scaffold_372:232156..233065+ (Clytia hemisphaerica)
ctaaaacttttggGTGGTTTAGCCTGttatttttaaaggtttcattGGAG
TTCATCCACCCTATTATTTGAGTATCTACAATCGGGCCTTTGAGGTAGTT
GgaaaaatactgaagttgagcctaGTGCGTTGCTTACGTTCAACTATAAA
TATTGCTGAAGTTTGTCCgatttaaaaaaagcttttgaagaAGTCATATC
CACTCATTGTTTTGCTTCTTTTAAAGGCTTTGAAACCTATAATTATCTCA
AAAGTATCACGATTATATTTTTCTCATTCTGTAATTTGAATACTGCGTTG
CGTTACTGAGACCCATAGCGTCAACGACCGCGGTCAGACAGACAATGATT
ATTATGTATTGAATCCAATGCAGCAAAATAGCCCTGGGTAGTCCATGTaa
ggctttttgatagactgtaTGACgcgattaaaattttaaaagggaaAATC
AAATAAGTACCacgtaagaaccgtgtaagGACCAGTTTTTAAAAATCTCA
ACTTTCGAAAACATTTGGGCCAAAAGGTTCAGAGATTTTACTCAGAACCG
TGAAAGGTTTTCACAAgctgaaaatcttaaatcatctgattatcccttta
aaagaGGCATGTCTCTGTCTCGAAATCTAGCAATATTCGATAAAGTATTA
GGAAAGTCTGGACTAATCAGTTGTTTAAAGTATATCTGTCTGGTACAAAA
TTCTAGATACGACCACTGGATATTATGATCATTTCgttcttcttttcttt
caggcttttttcGTTTCATACAAGCCATGTATGTTTTTGGGAATGCAAAG
ATGAGCAAATCAAGTAGAGCACAGCTCTTAGATCAACTTCAAGAAAGGTG
AGATTTCTATGACAACAGTTAGGAAGATTAACTCTAAATTTAATTCCTTT
TTAAAAGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062797-exon-scaffold_372-1491911889:232156..233065 | TCONS_00062797-exon-scaffold_372-1491911889:232156..233065 | Clytia hemisphaerica | exon |
| TCONS_00062797-exon-scaffold_372-1510915933:232156..233065 | TCONS_00062797-exon-scaffold_372-1510915933:232156..233065 | Clytia hemisphaerica | exon |
| TCONS_00062797-exon-scaffold_372-1575043694:232156..233065 | TCONS_00062797-exon-scaffold_372-1575043694:232156..233065 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_372 | supercontig | scaffold_372:232156..233065 + |
Blast
The following BLAST results are available for this feature:
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