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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062784 ID=TCONS_00062784|Name=TCONS_00062784|organism=Clytia hemisphaerica|type=transcript|length=920bp
CCGAATCGGAATATGTTTGTTATTGTtatcgctttcgttttcgatTTCGG
TGactaatttcatttttcgagtaTTTTTTTACGATTCTTTGCTGTTGATT
TTTGGTTTTCATTTGCTTGTAATTGTTGTAAAACCCTTACAGTAATATGC
TAACAATCGACGAGAAAACCACATATTTCGACACTTTCATGAAGTATGGA
CTTTTCTTTGCTGCTATATTTCAATTAATGTGTATTCTTGCCCTAATTTT
TGTACCTACCAGTTATCTTCGTAAAATGGAAAAAGAGCGAGAGGAAAATG
TTGCAGCAGGActgaataatgaaaataaaagcaatTTACCATCGGGAAAG
CCAAAAAAACAGACTGAAAAAGTAAGAAAGAGGAAATAATGTTTCATGGA
AATGATgactgacttttttttactgtttGTTTCGCGTTTTGTTGGAAAAC
GATAGCTAAAAGACAACAATCATCAGACACTAATAAGAGATACTATATTA
AAGGgttaaagacaaacaaaaaatgtctattCCTTCCTCGTAAGTGTTGA
AATATAATAATCCCGTAATCAAACGCCAAACGCCATCCATGAGCCATGTT
TTGTGTATATATAGAAATAAAACCAAACACTAAAAGCCAGAAACAGCTGA
AACAGCAAGAGCCACTCTTATTGTTTATAAATTCTATTATTGACGTCAAG
TATAATGTGTTGTGGGTTATGTAGATATATTAAAGTATGCTCTATAagat
aacattttttatttttccaatttgtACGCATTGATTTNGTTATGTATTTA
GATATATTAAGTATATGCTCTATAACTCTATAagataacattttttattt
ttctaatttgtacgcattgatttttttaataagggTAGATAATAAGATAA
TGAAACAATATCATTAAAGT Run BLAST on NCBI transcript from alignment at scaffold_371:448403..449322 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062784 ID=TCONS_00062784|Name=TCONS_00062784|organism=Clytia hemisphaerica|type=transcript|length=920bp|location=Sequence derived from alignment at scaffold_371:448403..449322 (Clytia hemisphaerica)
ACTTTAATGATATTGTTTCATTATCTTATTATCTAcccttattaaaaaaa
tcaatgcgtacaaattagaaaaataaaaaatgttatctTATAGAGTTATA
GAGCATATACTTAATATATCTAAATACATAACNAAATCAATGCGTacaaa
ttggaaaaataaaaaatgttatctTATAGAGCATACTTTAATATATCTAC
ATAACCCACAACACATTATACTTGACGTCAATAATAGAATTTATAAACAA
TAAGAGTGGCTCTTGCTGTTTCAGCTGTTTCTGGCTTTTAGTGTTTGGTT
TTATTTCTATATATACACAAAACATGGCTCATGGATGGCGTTTGGCGTTT
GATTACGGGATTATTATATTTCAACACTTACGAGGAAGGaatagacattt
tttgtttgtctttaacCCTTTAATATAGTATCTCTTATTAGTGTCTGATG
ATTGTTGTCTTTTAGCTATCGTTTTCCAACAAAACGCGAAACaaacagta
aaaaaaagtcagtcATCATTTCCATGAAACATTATTTCCTCTTTCTTACT
TTTTCAGTCTGTTTTTTTGGCTTTCCCGATGGTAAattgcttttattttc
attattcagTCCTGCTGCAACATTTTCCTCTCGCTCTTTTTCCATTTTAC
GAAGATAACTGGTAGGTACAAAAATTAGGGCAAGAATACACATTAATTGA
AATATAGCAGCAAAGAAAAGTCCATACTTCATGAAAGTGTCGAAATATGT
GGTTTTCTCGTCGATTGTTAGCATATTACTGTAAGGGTTTTACAACAATT
ACAAGCAAATGAAAACCAAAAATCAACAGCAAAGAATCGTAAAAAAAtac
tcgaaaaatgaaattagtCACCGAAatcgaaaacgaaagcgataACAATA
ACAAACATATTCCGATTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062784-exon-scaffold_371-1491911889:448403..449322 | TCONS_00062784-exon-scaffold_371-1491911889:448403..449322 | Clytia hemisphaerica | exon |
| TCONS_00062784-exon-scaffold_371-1510915933:448403..449322 | TCONS_00062784-exon-scaffold_371-1510915933:448403..449322 | Clytia hemisphaerica | exon |
| TCONS_00062784-exon-scaffold_371-1575043694:448403..449322 | TCONS_00062784-exon-scaffold_371-1575043694:448403..449322 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:448403..449322 . |
Blast
The following BLAST results are available for this feature:
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