TCONS_00062690 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062690
Unique NameTCONS_00062690
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3208

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062690 ID=TCONS_00062690|Name=TCONS_00062690|organism=Clytia hemisphaerica|type=transcript|length=3208bp
ATTGAATTTTATTAAAGATACGAAACTATAAATAGCGGTGACTACTTTCT
ATTAAATTAAAGCCTTTCTTCTGACATAGTCCGAGAGAGTCGCAAGGaag
ggaatttttttcaaaaattcagatttttagTTGTGCTCCATCAAAGTCAT
CAATAATTGGAACAGGAACAgGTACATTCTCAAAAAATGAAGCTGATATT
CTTGGCTGTATCACTTATAGTGGTTACACTTGATGCTTTACCAAAACACG
GCGTCTTTCGACCCCCGACGGAAATTGAAGTCAACGAGAAATTTTATCAT
CGACATGGAGATATTGAGCGAATCCAACATAATGATGTGTCCAACTTCAA
ACGCCTTGCAAAGAAATTGAAACACATCATTGGAGAGACGAAAGTGTTGA
AACGAGTACTTGATACAAGGAAGAAATTTGGTCACTTGAAAAGCGTAGCT
GACGTCAACTACCATAGATACGGCCGAAAGAACGATATAATAGAAAGTGA
AAATCGTAAACGAAACAGCGTCAAAATCAACCTTTGGAATCCAACACAAC
CCGGAGAACGATTAGTCATACCATACTCTTTCAGATCTGACTATCCAAAT
AGACTTCGACCATACGTTGAGAAAGCCATAAAATCCATGAATCAACATTT
GAGATGTGGTTACGATGTTTGGGTACCTTACAGTAACCAAGCTCATCGTG
TTGAGTTTATCAAGGATGGAGGTTGTTACAGTTTATTGGGCAAAGACACC
AGTGAAGGGAATAAACAACCAATCAGTATCGATGATGGATGCGAAGCAAA
ACATATTGTTTTGCACGAAATGATGCATGCAATGGGATTCTATCATGAAC
AGAATCGCTTCGATCGTGATCAATTCATCAAAATCAACTGGAACAATATT
CAAGACGGTATGGCAAGTCAGTTCGACAAAGCATCAAATAACAACATCTT
CCAAACTAGCGTGCCATATGATTACATGAGTGTTATGCACTACTCTTTGT
CATCATTctctaaaaatggtcaaaacacCATGACGATCTTGAAAAATGCT
CAGAGTGCAAAGTTAACGGCACAGGACTTACGAATCCTTGGAGACGTTCC
CGATTTATCTGCAGAGGATTTACAAGAAGTTAGAGCTTATTTCAACTGTA
ATTCTGCCGGTGGCCGAACAACAGCACGACCAGCACCACGAACAACAGCA
CGACCAGCGCCACGAACAACCCGAAGACCTGCAACGAATCGTCCACGAAC
AACCCGAGGAACAACAGAAACAGGAGGTGAAGCTACATGGTCATGGGTAT
CTGACGGATCAACAGAATCATATGGTACTGATGCTACAGAATCATATGGC
ACAGAATCATATGGTACGGAGGCTACAGAAATTTATGGTACAGAGGCTAC
AGACATTTATGGTACTGAGGGTACAGAATTTTATTGAGGCTCTCAAGGTC
CAGAACTTGTCTGGAGCTGATAATGGAGCTGATGATGACGCTATATACTC
AATGCTCTAAAGAATATTTCATATAAAGATATCTTTCAAAGTAGGGAACA
ATGGATTTGATGGTTAAAATCTATATATTGCTATTTACTAATTTGAGATA
TAGATCTtatatgaattatttttcaagccgaaaatattttcaagttgTAT
TTCTATAGTTTTATATCGATCTATTTATTCGCTAATTTACGTAAACtttt
tttgtaacctttttttACATGTaacatttcgaaatttatttcttttgata
tttacATATTCAAACTCAGATTCACTTTCAAACCATTTTACGAATAGACC
TTGGAAAAGTCCTCTTTTAAAAAACCAAGAAAATATGCAAAGTAAATATG
TCTGTGGCCCAAAAGCTTCTCATTGATAGCTAACTGATGGTAGGGGAGGG
CACTACTTTTCTGGTGTGAGCAAAAGCATCATCAGacaaattagttcccg
caaaaaatagTTTATTTAAGGTAAAACATTTTACTCTTgctctttttttc
tcttcaaaatGGAAATTGATAACATTTGAAGGTTCTTTTTCAAAGTGTTT
ATTCTTAGATTCGTTTCtttattcaaaacattttaatcAATCTGACAAAT
CGATAAGCTCGAACTCTCCAACAGTAGTTTCAGCTTTCGTGGTTTCTCCG
AAAGTGATAGAACGAGTTTTTGGTTGGTTTTGTTTAGCTGCTGCTTTTCT
TTGTCGTGCCGACCGTCTTCGGCTAGCCGACCTTTTTCGTTTTGCCGATG
TTGATCGTTTTCGGGAAGAAGATCTCTTACGGGAGGCAGAACGTTTTCGT
TTTGCCGAGGCTGATCGTTTTCGTGTCGGTATAGCCGACTTTTGTCGTCT
AGCACGTCGCTTTTTGGAAACCGATCTTTTTGGTGTGCAGTATATTTCTT
GAGGAACGTCGGTGGGTGGGGTCGATGGTTTTGCCGACACAAGACGTTTT
CGAGAAGTGGACTTTTTTCTCGAGGCTGACCTCTTTCGGGATCCTGATCT
TTTCTGGGAGTTTAATTTCTTTGAAGAAGGTGTTGATTGACTTTCCGTTA
AAGTTTGAACCAACTTTTTCGTTTCTTGGTTTGTTTGCTTATTAACAACA
GCCGCCGACTGGCTTCGTTTAGCAGAACGAGAACGTTTTCGTCTTACCGA
ATGACTTCTGCGTACCGATGGTGATCGTTGTCGTGCAATACTCGGTGAAC
TCTTTCTTCCATAAGTTCTACGTCGACGATTCGATCCCGATCGTTTTCGA
GATGCCGAACGTTTTTGGGACACTGCTCTCGGGCTTTGTGAACGAGCACG
TTGACGTGAGATTGAGCGCTGGTTACGTGAGCGGGATCGTTGTTTACGAG
ACATGGGACTACGTCTTCGTGATAAAGATCGTAACCTACGACCTGGAGAT
CGTCCGCGTCGTCCTAAAGATTAAGAATAAGAACTTTGTTTAGTTTTATG
GTGGAAGATGATCAACTATACTATTATGTATTTGGCATGCATTAACATTA
CAATGTTTTCAACATCTTCAACATAAGTTTTATACTTACTTAATGCTCTA
CTTCTGGTTCGCATCTTGAAAAATGTTGCtgacaaagaaagaaaaagtcg
GTGCTTTGTGCTTGTGTATGTACTAGATAACCGGTGGTGTTTACTTGGTT
GAGAATACAGTTGTTAGAAAGTATTGCACAAAGTTACTTGAACTCTACTT
Aattaaat
Run BLAST on NCBI

transcript from alignment at scaffold_371:429512..442512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062690 ID=TCONS_00062690|Name=TCONS_00062690|organism=Clytia hemisphaerica|type=transcript|length=13001bp|location=Sequence derived from alignment at scaffold_371:429512..442512+ (Clytia hemisphaerica)
ATTGAATTTTATTAAAGATACGAAACTATAAATAGCGGTGACTACTTTCT
ATTAAATTAAAGCCTTTCTTCTGACATAGTCCGAGAGAGTCGCAAGGaag
ggaatttttttcaaaaattcagatttttagTTGTGCTCCATCAAAGTCAT
CAATAATTGGAACAGGAACAggtacaaaaaaaattttatttagttttatA
CACCCCTGGTTCAGTGACGTTTTGGAGGGTTTCGCGGCAGATAGGGAAAT
CCAGGGAAATCCCCACAGCAAGgatgaattttttatcaaattcccAATTG
TGATAGAAATTCAACCTAAAAATACAATGCGGATGGTTTAAGTGAGCAAT
TTTTGCATTGAACTTTAAATGGGGTGGACAATTGGGCTGAAATTGCATTT
aattagggtatttttcccactggGGATGAAACTTTGACTAAATTTCCCAG
AGGGTGGGGTCCTGCCATGTATGTGACACATGTCTGTTTATACTTGGTAC
TCGTACCAGGCTTATCTTGCATCTATatggcaatgaattttaaaatatcA
TTATGTCATTATAAATAGGACACTGACTTACCTCGTTATTTTCCAATTCA
ATTCTTTTCTATCATCTAGGTACATTCTCAAAAAATGAAGCTGATATTCT
TGGCTGTATCACTTATAGTGGTTACACTTGATGCTTTACCAAAACACGGT
ATGATATTTTTTTAGTATCTGTTGACTAATCTGggtttaactaaggctcc
agtacagcgctaTAAGACCTTTTGATAGACTGGGTGATTAGTAACTTAAG
TGGACTCAGCGtcatgaaaaattataaattttcattaattttgcggattt
gggGGCGCCATGCGCGAAATTAAGTCTcgatggaaatttggaaagtcCTT
ATCCACGAAGAATGTTTAAGCTAAACTCAAAACTTGTAAATTTATAGTAA
ATTCATACTTGCCTTTACCAACTCTTAGCCTTCTAGTCTCTATCTAGTTA
CAACCGGTCTCAGTATTTTTAATGAACATCATATTTTTTATACGCTACAT
ATATATTTATCATACTCAATATCCAGGTGAAGAGCCAATTGTAAAACTTt
ggatatacacgtttttttttttaagaaactagttttaccaagcaggctca
atgtttcttaagaaatcggccttttgagccttaaatgtttcttacatgtt
tctaaactttgtcaagcttaaaggacgcatttcgataatacaatagtcta
attgactacacgcttctttttttttataagaatacactttataagaatgt
ccatgatgaaaatggccaaaaaactaagaatatgctaagaatatcaccat
catggaattttgctactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNta
aattatcaattatccccaagttaggctcactccttttacaaaagtgccat
tttatgcttgagacgtatgtactaaatgttaaatctagtatgaataAGGA
TGAATgaatgtgctgtaagaatattttaggatgattttcccaaaaaagtt
aagaatattaatgatgaaatggatttacaccattcttataaaaaaaaaaa
agcgtgtaatctacggtactttcctatcttctatattgattttctgactt
tctcaagtgtttctaactgttatgtatgtatatttctggaaccttgattg
aaaggttcttaaaaaaaACGAgttaaaaatgctattttctcattctcagc
ctcagcatgtttcttagatgtttcttagtttttaggcattctgagcctca
tgtttcttaaaagtgtgtttcttaaaaaaaaaacgtgtactgtgaAATAT
atcgttattattattattatttgagaTATATTTTGATGTTTCGATAATGc
actattttttatttatgaaaGTTTTCCTTCTATCGAAGATAGATTAGGTA
CACTTTTTCTATTGAAATATTAgaacaagaaataaaaaataagaaaaatt
gaatattaagTCTCGATGGAATATCTTAGTAAACGATTTTGTAAATATCT
TAATAAGAGAGATACACCTTTACTTAccgagaaatttttcaaagtcttgC
AAAACTATCATTTTGCGTGTCCTTTTCTTATTTAAAGAgccaaaatgaag
aaatttagGTTTAATACCctatttttactattttgacccttaatttgaat
aaaaatttactCAGTATTGTTCttagattgttcttatttttgtgccttgt
tgttcttataaaatcattcttataaaaaaggctaTATTTTACTAAATTAG
TTTTTAAATCACAGCAGAACCAGTGAGTAATCCTCCGTTTTATGCTGGAT
ACttccagggatatgttatagcgtagctggataacgcacatttgaaaaag
ccttgtcctatctctgtccctgacattaaaatttgatatgaaattaaact
tttttaattacaaattcgtgaaatttggatttctttttagccaatgattc
tgctgctgcattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNacatccgaaatttttaaagagaaacc
atgaaagcttctcaaattcataacacacgctgataaaattagatttcatt
tacaaagaagcttttggggtatctttttcaaatattattttgatgaaaag
cgggaacatcatagcaaaatatatgcaaacgtactgcatgaatactttgt
ctgcttaatttttcttataaaaacagagcACTttaggggacagagatgga
tttttattatgaacagtttacaatagaaaagacaaaggagcaatccgcta
aggaattctcgtccttcatccagctacgctataacatatccctgatactt
ctaaactttgatgaaaatcaaaacGCGACTTAAAACGCCTAATTTATACT
TCATCTCATCTTCGGCCAGACATTTGTTTATACACTTTAAAGGGCGGTTT
AACAAGACCCTTTTTAGACTATGACTTTTTTCCATTGTTCAGCGATATTG
CAATCTTTTTTCCAGGCGTCTTTCGACCCCCGACGGAAATTGAAGTCAAC
GAGAAATTTTATCGTAAGTGATAGTACGCATACTTTACACAATGTTTTAT
AAAAAGGTCATACCCATTTCTTAACCATTTAAGTACCAACCcttcctgta
atgcccagtttgagttagaaatcgtcattcttggtcgtaggaattggatt
gggtttcatggtcaagcaaaaaaaaaatcaaaagtaaaaaagacttttcc
aatgagaaaaaagaaagtaagaaaaatgcaaagatttgacaaaaatccac
ttttttaagattttgaccgtttttgaccattttcggTCAACGAGtaatcc
aagaacctccaaaattAGCCCTGCtgtacttgattctgtcctctagcgaa
ttaatttgaatttttactaCTGGGCTCCTTtttatcattcaggcaggtcc
acCTAAATCTCTtaagctatccaacggactATAAACGAGCTACAAACTCC
TTCTAGCTCCGGAGacataagcctttaaagtttgaactagcaattttctt
tgaaaaatgaccgtggtacttaaagggttaagctGTTAAATTCTTTCTTG
ATTTAAGTCCACTCAGCCTTTTTCCTTGACACATTTTTTAAACTGAATGA
TCACGAAATACTATATGATTTATGCTGATATATCCAACTATATCTTAATC
TTAATCTATCTTAATCTTCTAAACAGgccttttatttaatttttctgttT
ACTTTAGATCGACATGGAGATATTGAGCGAATCCAACATAATGATGGTAA
GACTTTATTCCGGGAGGTTTACGATTTTATTGCAGCCGTTGCAGCTTGGC
CTAATTAAGCCCTATTTACATTCTGATTTAGAAGTTGATCAAATTATCTT
GGTAACCATGGCTTTGTATACATCTTTAGACATGCCCAGTATTGTCCACA
TAATCAATAGTTGACTTAAACTATGATTTGAAACTGGACTTCATGGCGTC
TCCGTCCCAATCTTCGATCGAAATTAATCTATAGTATTAGGTCTTTTTAT
GACTCCTTTTAACCACTATCCTAATTTCCTATTCTTCTTTCTCTCCAAAC
TGTAGTGTCCAACTTCAAACGCCTTGCAAAGAAATTGAAACACATCATTG
GAGAGACGAAAGTGTTGAAACGAGTACTTGATACAAGGAAGAAATTTGGT
ACGTTTCAAAGCTTAACCCGCTTTTTATCAGGGGAGGGGTGATTTCCACC
ACCTTGGTGGTTGGTGGTTTTTTGTTAATAGctcacagaaaaaaactttt
tttgacactgaaactttttgacatttaaCATAATCCTAATATGTATACCA
AATGTTATCATCATACACCCactagatcaggttttatgactgaGTATTTT
GATTTTGTGTGGGCGTGTCATAAAGTCCaactaaaaccctgtaaaatctc
aaagttgaaattttcggTAAAAACCGACactaatttcattgttttttaac
TTGTCCCCAGGTCACTTGAAAAGCGTAGCTGACGTCAACTACCATAGATA
CGGTATAATTCTtagttttgatatttaaatattttatatatgttaacgat
ttgacataaaaaatttgcaccttgggtaggctgctggcatctaCTAAAGg
atatactacctggggttttgtagaggtagGCTATTCAGACTATGCAAGTT
GGGTGGAGTGGAAAAACTCAATTTAGTTACCATTCCTGAGTGTTTTTATA
AGGTCAGACCATTTCATTCTTATCAATCTTGTTCCTAGGTTATGAAGTCA
GTAAGCAAATTAAAGCGGTGCCGGCGGcgttacttaatttttttttctaa
ctcGCTTTGACAGGCCGAAAGAACGATATAATAGAAAGTGAAAATCGTAA
ACGAAACAGCGTCAAAATCAACCTTTGGAATCCAACACAACCCGGAGAAC
GATTAGTCATACCATACTCTTTCAGGTAAGATGAAATCTTTCTCGTTAAT
TTTGCATTTAGCTGCAGTCTTTGTNTAATAGTTGACTTAAACTATGATTT
GAAACTGGACTTCATGGCGTCTCCGTCCCAATCATCGATCGAAATTAATC
TATAGTATTAGGTCTTTTTATGACTCCTTTTTACCACTATCCTAATTTCC
TATTTTTCTTTCCCTCCAAACTGTAGTGTCCAACTTCAAACGCCTTGCAA
AGAAATTGAAACACATCATTGGAGAGACGAAAGTGTTGAAACGAGTACTT
GACTCAAGGAAGAAATTTGGTGCGTTTCAAAGCTTAACCCGCTTTTTATC
AGGGGAGGGGTGATTTCCACCACCTTGGTGGTTGGTGGTTTTTTGTTAAT
AGctcacagaaaaaaactttttttgacactgaaactttttgacatttaaC
ATAATCCTAATATGTATACCAAATATTATCATCATAAACCCACTAGATTA
GGTTTTATGACTGAGTATTTTGTGCGGGCGTGTCATAAAGTCCaactaaa
accctgtaaaatctcAAATGTTGAAATTTTCGGTAAGAACCGACactaat
ttcattgttttttaactcgtCTCCAGGTCACTTGAAAAGCGTAGCTGACG
TCAACTACCATAGATACGGTATAATTCTTAGTTTTAATATTTAAACATTT
TATATATGTCAACGATTTGACATAAAGAATTTGCACCTTGGGTAGACTGC
TTGCATCCACTAAAGGATTTGTGCTCCTTAtttactacctggggttttga
tGTAGGCTATTCAGACTATGCACCTTGGGTGGAGTGGAAAAACTCAATTT
AATTACCATTTTATGCTtccctacacaaattttgcacccctCCTGTCTGC
GCTACTATAATGCGTTAGTTAATTTCTTTATCATATCTCGCTTCGACAGG
CCGAAAGAACGATATAATAGAAAGTGAAAACCGTAAACGAAACAGCGTCA
AAATCAACCTTTGGAATCCAACACAACCCGGAGAAAAATTAGTCATACCA
TACTCTTTCAGGTAAGGTGAAATTTATCTCGTTAATTTTGCATTTAATTG
CAGACTTTTTTGTGGTATTCTCAAAGTGTTCTCataattcaaaatcaatt
ttaatttattaaTGATTTTGTGCCAAGTGCTAATACTTTTTAACGCATTT
CCATTTGTAATTTATTAATGATTTTGTGCCAAGTGCTAATACTTTTTAAC
GCATTTCCATTTGTAATTTATTAATGATTTTGTGCCAAGTGCTAATACTT
TTTAACGCATTTCCATTGGCATCAGACTATATCAAGTTCTTGCTAACCCA
ATAAAAAACGGATATTCGAACATCTCGTTCTAACCAGGTTATTTTTTCCG
CTTTAGATCTGACTATCCAAATAGACTTCGACCATACGTTGAGAAAGCCA
TAAAATCCATGAATCAACATTTGAGATGTGGTTACGATGTTTGGGTACCT
TACAGTAACCAAGCTCATCGTGTTGAGTTTATCAAGGATGGAGGGTTTGT
TATTCGACTTACTATTATTTATTTCCGAGTAGATTCTGATTACTCTGCGT
TGGCACGTATTCACTATAAAGGTTGGTACTCTGGGAGAAAATCCATAAAA
TGGGGGGTCAATATTAAGTGATTTTGGGGTGACTTTCCCAAAAAACCCTA
GGAAAATTTATGGTCATTATAAAATTCTATTGGAGTGTGTTTTCCGACAA
AAATGCAAAGTGACCCCCTCCCCTACAATTAAGCACAAATAAGGAGTTAG
CGCACCGCTTTGATCTTTTCCAGTCAAATTTGGGATGAATATTAAATAAG
TTGAAATATTTTTATGGGACAAGAGATTTTCCTGAAATTGTGATCAATGC
TTAAGCAAATACTAGTGAAACTTCTCGGGATATTCATTTTTGAATGACGG
GGGATTTTTCAATTGTCGAAACAAAAAGTTTTTTCTCTTTTCAGTTGTTA
CAGTTTATTGGGCAAAGACACCAGTGAAGGGAATAAACAACCAATCAGTA
TCGATGATGGATGCGAAGCAAAACGTGAGTGATATGCACTTTTTTCGACT
GTAACCACCAATTGCATTTTATTTTTCGTTTTTTTCCACTAAAACCGTCC
CAGTCCTTTTTTCGCACCTATAAACAATAGAAAAATGTATCAAAAAAGGA
TTGGATCGAGTTTAGGGGGTAATTAAAGGGACATTAAAGTAGTAAAATGT
AAACATTGCGCGAACCACGTGTCATTAAAAAAAACAATTAAAATCACGTG
TCCAAAACAAACTTGTAAAACAATTGAACAATCAAAATTAGCCATATttg
gtttgattttttattttgacatgtgacatttgttttgattttgtatccgc
tgcatacagtttgtttacaaatttcgcaagtactgttatgtccctttaaa
tacgcgcgactacggtcgaaaaggtgtatttttatGTTATCGTATTTTTC
TGATTTACAGTCGAGAAGTAAGCTTGTTACTCTTCACTTTTtactcacag
acccggtgggggTAAATATAACAGACCAAAACTAGATGCTTTTTTTATGG
CTTGGGATTTGGATTTGTTTTCGAATTTAGaatatgattttgatattttg
ataccAATTTTTCCAATCGGAAGGAGTCGAATctatgagaaaggggtgta
taaTTCTCTTGTGGTGATGGTGAAAGATGCATTGAAACGGGATTGACACA
TTCACATTGTTTACTGGTTCAAAAGATTTACAGTCGACATTCAACAACTC
GAACATGAAAGGGGAAAGAGGAAAAAATCATTCGAGTAAGGAGGGTTATA
TCATAGTCACTAGAATTGACATTGGTTAAATTTATAGATAAACTAAATAG
CCCTAAGACTTTTTTCATGAGTTCAGGTTCTTCTGTATAAACGTCAAATG
AACGTTAAAAAATATTACGTACCAGCACGACTGCTATATCATCATAAAAC
TTCTTTTCTTTTGCTAGATATTGTTTTGCACGAAATGATGCATGCAATGG
GATTCTATCATGAACAGAATCGCTTCGATCGTGATCAATTCATCAAAATC
AACTGGAACAATATTCAAGACGGTAAGTTTCTTATCTCTAAATAACTTTT
ATCCCTGAGGTGATTATTCTGTCCAAAGAGCCTGTGCAGGTTTATCTTTA
GGGACATGTCGTAAATACATGGAGGACGAAAAACTAGTCTCTTGTAGGTT
GTATTTAATGGAGAAATCATCAGGAAAACATGTAATTTTAGTCCTATTCT
CAGGGGTACCTTTGATCACTAATTTTTACAACAAACGATACTATATTGGT
TTTATGGATATTCAATACTGTTTTTTTCCCGGTAAACTCAAAACCCATCA
AAAATAGATAATTAAGAAAATTAGATATCTGAACTGGCTGAGTTTTCTCT
ATTTAGGTATGGCAAGTCAGTTCGACAAAGCATCAAATAACAACATCTTC
CAAACTAGCGTGGTAAGAGTTCTCTTTCTTATTGTTCTACGGTTAACTCA
AATTCGTCGATTGGATTTCACTTCGCAAAtcttaaactttaaaaatttca
taTCTTCATATCGACTGTTTAGCGAATCAACTGAGCATGAGTTCATCTCA
TCTCTTTGACTAGtgttattttaatttatttttgggACTGGAAAAGTTTT
TCGCAAAAGGCGAAAATCGGCAAATCATAAGCAGATATTATACATTTTAT
acaattaaattcaaaataaatccGGGTTATGTTAAGGAACATTTCACATT
ATCATATATCACCTTTAGTAGTGTGTAGTAGCACTTATTATGTCCATCAG
CTGACACGTGTTTTGTCCTATTCAGAACTGGCAATGCAGCTTGGTGAATG
AATATAGACTACTGACTAAACACTAAATATTAACTAATGCCTTATCGCTT
TTGGTGAATGAACTAGCGTAGCCTTGCTCCTCAACATAATCCAATAATAC
Gcactatacatgttttttagaagcattgcacttataggcatgtctaggct
cagatatggcaaaaatttaagtcTAATTTAAGCATCACCTGAAGCCTACG
AATAAATgtattttccagatttttgctgtttttggctGAGATTTTACGGA
TCTTCggaattttcctaaaattttgcTTGTGATATTAGCATCCTTATAAG
CTTTTTTTAGCCTTGTCAAGCCCTCGACCTAAGCATCTTCGAGCCTGTTT
TCGaatttatgcttattaaaaaaacatgttaatGCCTCTTTTTTTTGCTA
TACATTACAGCCATATGATTACATGAGTGTTATGCACTACTCTTTGTCAT
CATTctctaaaaatggtcaaaacacCATGACGATCTTGAAAAATGCTCAG
AGTGCAAAGTTAACGGCACAGGACTTACGAATCCTTGGAGACGTTCCCGA
TTTATCTGCAGAGGATTTACAAGAAGTTAGAGCTTATTTCAACTGTAAGT
AtctaacacccctgtgtcacagacccgctgggaccccaacCTAATGAAAC
TTTCCCACAGCGAAgataaaattttagaaatctttgaaaagttaGAGCTt
acttcaaaaagtttgtcTAATAGGCCCCGATCCCCGATGAAACTTtcgaa
aaatccagtggggatgggtttagagtgcaattttttatatttgattttgg
ATGGggttgaaatcaaagtcaatttcccagtggggccgGGGTTTCAACac
gtctgtgacacaggggtgttatctTTCAAAAGTTTGTCAAATCTATTCAT
ATTGATATGGAATACCCATGTTTCATTCTGTACTTCAACAAATGTGTTAT
AATCTCCGACTTTTCTCTCTCATTTTTTTCCGAAAGTATTCTTTATCATC
CCTCTCTAAATCGATCTTTAAGTGGCCAAAAATTGTCTTCGAAatagaga
aagattcaaattacaAAGACTGTTTTATACTAATTTCAACCTGAGGTATC
AATAtttcgaattacaaaaagattTGAATAGGAGAGACTCGAATAAGAGA
GAGTTGACagtatttcatttttgaaaacgatAACCATTAGGTAATTCTGC
CGGTGGCCGAACAACAGCACGACCAGCACCACGAACAACAGCACGACCAG
CGCCACGAACAACCCGAAGACCTGCAACGAATCGTCCACGAACAACCCGA
GGAACAACAGAAACAGGAGGTGAAGCTACATGGTCATGGGTATCTGACGG
ATCAACAGAATCATATGGTACTGATGCTACAGAATCATATGGCACAGAAT
CATATGGTACGGAGGCTACAGAAATTTATGGTACAGAGGCTACAGACATT
TATGGTACTGAGGGTACAGAATTTTATTGAGGCTCTCAAGGTCCAGAACT
TGTCTGGAGCTGATAATGGAGCTGATGATGACGCTATATACTCAATGCTC
TAAAGAATATTTCATATAAAGATATCTTTCAAAGTAGGGAACAATGGATT
TGATGGTTAAAATCTATATATTGCTATTTACTAATTTGAGATATAGATCT
tatatgaattatttttcaagccgaaaatattttcaagttgTATTTCTATA
GTTTTATATCGATCTATTTATTCGCTAATTTACGTAAACtttttttgtaa
cctttttttACATGTaacatttcgaaatttatttcttttgatatttacAT
ATTCAAACTCAGATTCACTTTCAAACCATTTTACGAATAGACCTTGGAAA
AGTCCTCTTTTAAAAAACCAAGAAAATATGCAAAGTAAATATGTCTGTGG
CCCAAAAGCTTCTCATTGATAGCTAACTGATGGTAGGGGAGGGCACTACT
TTTCTGGTGTGAGCAAAAGCATCATCAGacaaattagttcccgcaaaaaa
tagTTTATTTAAGGTAAAACATTTTACTCTTgctctttttttctcttcaa
aatGGAAATTGATAACATTTGAAGGTTCTTTTTCAAAGTGTTTATTCTTA
GATTCGTTTCtttattcaaaacattttaatcAATCTGACAAATCGATAAG
CTCGAACTCTCCAACAGTAGTTTCAGCTTTCGTGGTTTCTCCGAAAGTGA
TAGAACGAGTTTTTGGTTGGTTTTGTTTAGCTGCTGCTTTTCTTTGTCGT
GCCGACCGTCTTCGGCTAGCCGACCTTTTTCGTTTTGCCGATGTTGATCG
TTTTCGGGAAGAAGATCTCTTACGGGAGGCAGAACGTTTTCGTTTTGCCG
AGGCTGATCGTTTTCGTGTCGGTATAGCCGACTTTTGTCGTCTAGCACGT
CGCTTTTTGGAAACCGATCTTTTTGGTGTGCAGTATATTTCTTGAGGAAC
GTCGGTGGGTGGGGTCGATGGTTTTGCCGACACAAGACGTTTTCGAGAAG
TGGACTTTTTTCTCGAGGCTGACCTCTTTCGGGATCCTGATCTTTTCTGG
GAGTTTAATTTCTTTGAAGAAGGTGTTGATTGACTTTCCGTTAAAGTTTG
AACCAACTTTTTCGTTTCTTGGTTTGTTTGCTTATTAACAACAGCCGCCG
ACTGGCTTCGTTTAGCAGAACGAGAACGTTTTCGTCTTACCGAATGACTT
CTGCGTACCGATGGTGATCGTTGTCGTGCAATACTCGGTGAACTCTTTCT
TCCATAAGTTCTACGTCGACGATTCGATCCCGATCGTTTTCGAGATGCCG
AACGTTTTTGGGACACTGCTCTCGGGCTTTGTGAACGAGCACGTTGACGT
GAGATTGAGCGCTGGTTACGTGAGCGGGATCGTTGTTTACGAGACATGGG
ACTACGTCTTCGTGATAAAGATCGTAACCTACGACCTGGAGATCGTCCGC
GTCGTCCTAAAGATTAAGAATAAGAACTTTGTTTAGTTTTATGGTGGAAG
ATGATCAACTATACTATTATGTATTTGGCATGCATTAACATTACAATGTT
TTCAACATCTTCAACATAAGTTTTATACTTACTTAATGCTCTACTTCTGG
TTCGCATCTTGAAAAATGTTGCtgacaaagaaagaaaaagtcgGTGCTTT
GTGCTTGTGTATGTACTAGATAACCGGTGGTGTTTACTTGGTTGAGAATA
CAGTTGTTAGAAAGTATTGCACAAAGTTACTTGAACTCTACTTAattaaa
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039287XLOC_039287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062690-exon-scaffold_371-1491911889:429512..429682TCONS_00062690-exon-scaffold_371-1491911889:429512..429682Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:429512..429682TCONS_00062690-exon-scaffold_371-1510915933:429512..429682Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:429512..429682TCONS_00062690-exon-scaffold_371-1575043694:429512..429682Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:430131..430209TCONS_00062690-exon-scaffold_371-1491911889:430131..430209Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:430131..430209TCONS_00062690-exon-scaffold_371-1510915933:430131..430209Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:430131..430209TCONS_00062690-exon-scaffold_371-1575043694:430131..430209Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:433427..433474TCONS_00062690-exon-scaffold_371-1491911889:433427..433474Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:433427..433474TCONS_00062690-exon-scaffold_371-1510915933:433427..433474Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:433427..433474TCONS_00062690-exon-scaffold_371-1575043694:433427..433474Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:434169..434207TCONS_00062690-exon-scaffold_371-1491911889:434169..434207Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:434169..434207TCONS_00062690-exon-scaffold_371-1510915933:434169..434207Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:434169..434207TCONS_00062690-exon-scaffold_371-1575043694:434169..434207Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:434517..434609TCONS_00062690-exon-scaffold_371-1491911889:434517..434609Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:434517..434609TCONS_00062690-exon-scaffold_371-1510915933:434517..434609Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:434517..434609TCONS_00062690-exon-scaffold_371-1575043694:434517..434609Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:434922..434963TCONS_00062690-exon-scaffold_371-1491911889:434922..434963Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:434922..434963TCONS_00062690-exon-scaffold_371-1510915933:434922..434963Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:434922..434963TCONS_00062690-exon-scaffold_371-1575043694:434922..434963Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:435275..435386TCONS_00062690-exon-scaffold_371-1491911889:435275..435386Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:435275..435386TCONS_00062690-exon-scaffold_371-1510915933:435275..435386Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:435275..435386TCONS_00062690-exon-scaffold_371-1575043694:435275..435386Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:436768..436905TCONS_00062690-exon-scaffold_371-1491911889:436768..436905Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:436768..436905TCONS_00062690-exon-scaffold_371-1510915933:436768..436905Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:436768..436905TCONS_00062690-exon-scaffold_371-1575043694:436768..436905Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:437356..437435TCONS_00062690-exon-scaffold_371-1491911889:437356..437435Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:437356..437435TCONS_00062690-exon-scaffold_371-1510915933:437356..437435Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:437356..437435TCONS_00062690-exon-scaffold_371-1575043694:437356..437435Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:438379..438483TCONS_00062690-exon-scaffold_371-1491911889:438379..438483Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:438379..438483TCONS_00062690-exon-scaffold_371-1510915933:438379..438483Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:438379..438483TCONS_00062690-exon-scaffold_371-1575043694:438379..438483Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:438818..438873TCONS_00062690-exon-scaffold_371-1491911889:438818..438873Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:438818..438873TCONS_00062690-exon-scaffold_371-1510915933:438818..438873Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:438818..438873TCONS_00062690-exon-scaffold_371-1575043694:438818..438873Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:439672..439855TCONS_00062690-exon-scaffold_371-1491911889:439672..439855Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:439672..439855TCONS_00062690-exon-scaffold_371-1510915933:439672..439855Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:439672..439855TCONS_00062690-exon-scaffold_371-1575043694:439672..439855Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1491911889:440452..442512TCONS_00062690-exon-scaffold_371-1491911889:440452..442512Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1510915933:440452..442512TCONS_00062690-exon-scaffold_371-1510915933:440452..442512Clytia hemisphaericaexon
TCONS_00062690-exon-scaffold_371-1575043694:440452..442512TCONS_00062690-exon-scaffold_371-1575043694:440452..442512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:429512..442512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.5726	21.6938	1.44642	0.13692	4.27066e-05	0.0290075	0.328555	0	0.212668	0.77138	0.0113725	0	0.166961	1.69336e-10	0.228034	0.200289	63.7386	67.0934	0	0.233773	184.126	185.406	81.203	101.301	99.0335	75.1496	89.2449	92.2763	6.89122	7.82299
Blast
[Close]
BLAST of TCONS_00062690 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 4.371e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 1 
Query:  478 KNDIIESENRKRNSVKINLWNPTQPGERLVIPYSFRSDY--PNRLRPYVEKAIKSMNQHLRCGYDVWVPYSNQAHRVEFIKDGGCYSLLGKDTSEGNKQPISIDDGC--EAKHIVLHEMMHAMGFYHEQNRFDRDQFIKINWNNIQDGMASQFDKASNNNIFQTSVPYDYMSVMHYSLSSFSKNGQNTMTILKNAQSAKLTAQDLRILGDVPDLSAEDLQEVRAYFNCN 1152
            + DII     +  S   N W P      + +P+   S Y  P+R     +  ++++ +  R     +V Y +Q   +  I   GC+S +G+    G  Q +S+   C  + + IVLHE+MH +GF+HE  R DRD++I++NWN I  G    F K+ ++N+     PYDY SVMHY   +FS+ G  T+T         L A  + I G   +LSA D+  V   + C+
Sbjct:   75 EGDIIRPSPFRLLSATSNKW-PMGGSGVVEVPFLLSSKYDEPSR-----QVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRS---GGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML---TPYDYSSVMHYGRLAFSRRGLPTIT--------PLWAPSVHI-GQRWNLSASDITRVLKLYGCS 282
The following BLAST results are available for this feature:
BLAST of TCONS_00062690 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL4.371e-2531.88Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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