TCONS_00062685 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062685
Unique NameTCONS_00062685
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062685 ID=TCONS_00062685|Name=TCONS_00062685|organism=Clytia hemisphaerica|type=transcript|length=3578bp
TACACATCCCCTTTATCAAACCATTTCAGAGGGGATGCGTACAGCCGAGC
GATTATCTAGTCTACGTATGTTTTtcttgttaaaatatctttaaaaacaC
CGCAAATTTTATTAGTCGCTTTTGATCCTTAATCATGGAGTCccttttta
ttacaaaattccaaaattagTACATACTTAACATTTTGtattaacaaaat
aaaacaattaacaaTTTTTACATCATTTGCCAACCTAAAAAGTAGTGCTC
TGTGTACGAGATTGCCTCTTTCAAATTTATGTCATCGAAGTTTAAACACA
GCTTACCACAAGCAAAGCAAAATTCATATACATAGAGATACATTATTACA
ACCTTTCCTATACATAATTAATTGAATTTTATTAAAGATACGAAACTATA
AATAGCGGTGACTACTTTCTATTAAATTAAAGCCTTTCTTCTGACATAGT
CCGAGAGAGTCGCAAGGaagggaatttttttcaaaaattcagatttttag
TTGTGCTCCATCAAAGTCATCAATAATTGGAACAGGAACAgGTACATTCT
CAAAAAATGAAGCTGATATTCTTGGCTGTATCACTTATAGTGGTTACACT
TGATGCTTTACCAAAACACGGCGTCTTTCGACCCCCGACGGAAATTGAAG
TCAACGAGAAATTTTATCATCGACATGGAGATATTGAGCGAATCCAACAT
AATGATGTGTCCAACTTCAAACGCCTTGCAAAGAAATTGAAACACATCAT
TGGAGAGACGAAAGTGTTGAAACGAGTACTTGACTCAAGGAAGAAATTTG
GTCACTTGAAAAGCGTAGCTGACGTCAACTACCATAGATACGGCCGAAAG
AACGATATAATAGAAAGTGAAAACCGTAAACGAAACAGCGTCAAAATCAA
CCTTTGGAATCCAACACAACCCGGAGAAAAATTAGTCATACCATACTCTT
TCAGATCTGACTATCCAAATAGACTTCGACCATACGTTGAGAAAGCCATA
AAATCCATGAATCAACATTTGAGATGTGGTTACGATGTTTGGGTACCTTA
CAGTAACCAAGCTCATCGTGTTGAGTTTATCAAGGATGGAGGTTGTTACA
GTTTATTGGGCAAAGACACCAGTGAAGGGAATAAACAACCAATCAGTATC
GATGATGGATGCGAAGCAAAACATATTGTTTTGCACGAAATGATGCATGC
AATGGGATTCTATCATGAACAGAATCGCTTCGATCGTGATCAATTCATCA
AAATCAACTGGAACAATATTCAAGACGGTATGGCAAGTCAGTTCGACAAA
GCATCAAATAACAACATCTTCCAAACTAGCGTGCCATATGATTACATGAG
TGTTATGCACTACTCTTTGTCATCATTctctaaaaatggtcaaaacacCA
TGACGATCTTGAAAAATGCTCAGAGTGCAAAGTTAACGGCACAGGACTTA
CGAATCCTTGGAGACGTTCCCGATTTATCTGCAGAGGATTTACAAGAAGT
TAGAGCTTATTTCAACTGTAATTCTGCCGGTGGCCGAACAACAGCACGAC
CAGCACCACGAACAACAGCACGACCAGCGCCACGAACAACCCGAAGACCT
GCAACGAATCGTCCACGAACAACCCGAGGAACAACAGAAACAGGAGGTGA
AGCTACATGGTCATGGGTATCTGACGGATCAACAGAATCATATGGTACTG
ATGCTACAGAATCATATGGCACAGAATCATATGGTACGGAGGCTACAGAA
ATTTATGGTACAGAGGCTACAGACATTTATGGTACTGAGGGTACAGAATT
TTATTGAGGCTCTCAAGGTCCAGAACTTGTCTGGAGCTGATAATGGAGCT
GATGATGACGCTATATACTCAATGCTCTAAAGAATATTTCATATAAAGAT
ATCTTTCAAAGTAGGGAACAATGGATTTGATGGTTAAAATCTATATATTG
CTATTTACTAATTTGAGATATAGATCTtatatgaattatttttcaagccg
aaaatattttcaagttgTATTTCTATAGTTTTATATCGATCTATTTATTC
GCTAATTTACGTAAACtttttttgtaacctttttttACATGTaacatttc
gaaatttatttcttttgatatttacATATTCAAACTCAGATTCACTTTCA
AACCATTTTACGAATAGACCTTGGAAAAGTCCTCTTTTAAAAAACCAAGA
AAATATGCAAAGTAAATATGTCTGTGGCCCAAAAGCTTCTCATTGATAGC
TAACTGATGGTAGGGGAGGGCACTACTTTTCTGGTGTGAGCAAAAGCATC
ATCAGacaaattagttcccgcaaaaaatagTTTATTTAAGGTAAAACATT
TTACTCTTgctctttttttctcttcaaaatGGAAATTGATAACATTTGAA
GGTTCTTTTTCAAAGTGTTTATTCTTAGATTCGTTTCtttattcaaaaca
ttttaatcAATCTGACAAATCGATAAGCTCGAACTCTCCAACAGTAGTTT
CAGCTTTCGTGGTTTCTCCGAAAGTGATAGAACGAGTTTTTGGTTGGTTT
TGTTTAGCTGCTGCTTTTCTTTGTCGTGCCGACCGTCTTCGGCTAGCCGA
CCTTTTTCGTTTTGCCGATGTTGATCGTTTTCGGGAAGAAGATCTCTTAC
GGGAGGCAGAACGTTTTCGTTTTGCCGAGGCTGATCGTTTTCGTGTCGGT
ATAGCCGACTTTTGTCGTCTAGCACGTCGCTTTTTGGAAACCGATCTTTT
TGGTGTGCAGTATATTTCTTGAGGAACGTCGGTGGGTGGGGTCGATGGTT
TTGCCGACACAAGACGTTTTCGAGAAGTGGACTTTTTTCTCGAGGCTGAC
CTCTTTCGGGATCCTGATCTTTTCTGGGAGTTTAATTTCTTTGAAGAAGG
TGTTGATTGACTTTCCGTTAAAGTTTGAACCAACTTTTTCGTTTCTTGGT
TTGTTTGCTTATTAACAACAGCCGCCGACTGGCTTCGTTTAGCAGAACGA
GAACGTTTTCGTCTTACCGAATGACTTCTGCGTACCGATGGTGATCGTTG
TCGTGCAATACTCGGTGAACTCTTTCTTCCATAAGTTCTACGTCGACGAT
TCGATCCCGATCGTTTTCGAGATGCCGAACGTTTTTGGGACACTGCTCTC
GGGCTTTGTGAACGAGCACGTTGACGTGAGATTGAGCGCTGGTTACGTGA
GCGGGATCGTTGTTTACGAGACATGGGACTACGTCTTCGTGATAAAGATC
GTAACCTACGACCTGGAGATCGTCCGCGTCGTCCTAAAGATTAAGAATAA
GAACTTTGTTTAGTTTTATGGTGGAAGATGATCAACTATACTATTATGTA
TTTGGCATGCATTAACATTACAATGTTTTCAACATCTTCAACATAAGTTT
TATACTTACTTAATGCTCTACTTCTGGTTCGCATCTTGAAAAATGTTGCt
gacaaagaaagaaaaagtcgGTGCTTTGTGCTTGTGTATGTACTAGATAA
CCGGTGGTGTTTACTTGGTTGAGAATACAGTTGTTAGAAAGTATTGCACA
AAGTTACTTGAACTCTACTTAattaaat
Run BLAST on NCBI

transcript from alignment at scaffold_371:428495..442512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062685 ID=TCONS_00062685|Name=TCONS_00062685|organism=Clytia hemisphaerica|type=transcript|length=14018bp|location=Sequence derived from alignment at scaffold_371:428495..442512+ (Clytia hemisphaerica)
TACACATCCCCTTTATCAAACCATTTCAGAGGGGATGCGTACAGCCGAGC
GATTATCTAGTCTACGTATGTTTTtcttgttaaaatatctttaaaaacaC
CGCAAATTTTATTAGTCGCTTTTGATCCTTAATCATGGAGTCccttttta
ttacaaaattccaaaattagTACATACTTAACATTTTGtattaacaaaat
aaaacaattaacaaTTTTTACATCATTTGCCAACCTAAAAAGTAGTGCTC
TGTGTACGAGATTGCCTCTTTCAAATTTATGTCATCGAAGTTTAAACACA
GCTTACCACAAGCAAAGCAAAATTCATATACATAGAGATACATTATTACA
ACCTTTCCTATACATAATTAATTGAATTTTATTAAAGATACGAAACTATA
AATAGCGGTGACTACTTTCTATTAAATTAAAGCCTTTCTTCTGACATAGT
CCGAGAGAGTCGCAAGGaagggaatttttttcaaaaattcagatttttag
TTGTGCTCCATCAAAGTCATCAATAATTGGAACAGGAACAggtacaaaaa
aaattttatttagttttatACACCCCTGGTTCAGTGACGTTTTGGAGGGT
TTCGCGGCAGATAGGGAAATCCAGGGAAATCCCCACAGCAAGgatgaatt
ttttatcaaattcccAATTGTGATAGAAATTCAACCTAAAAANGACAGGC
GAGCAATTATCTAGTCTACGTCTGTTTTtcttgttaaaatatctttaaaa
acaCCGCAAATTTTAGTCGCTTTTGATCCTTAATCATGGAGTCCCTTCTT
ATtacaaaattccaaaattagTACAAACTTAACATTTTGtatcaacaaaa
taaaacaataatttttaCATCATTTGCCAACCTAAAAAGTAGTGCTCTGT
GTACGAGATTGCCTCTTTCAAATTTATGTCATCGAAGTTTAAACACAGCT
TACTACAAGCAAAGCAAAATTCATATACATAGAGATACATTATTACAACC
TTTCCTATACATAATTAATTGAATTTTATTAAAGATACGAAACTATAAAT
AGCGGTGACTACTTTCTATTAAATTAAAGCCTTTCTTCTGACATAGTCCG
AGAGAGTCGCAAGGaagggaatttttttcaaaaattcagatttttagTTG
TGCTCCATCAAAGTCATCAATAATTGGAACAGGAACAggtacaaaaaaaa
ttttatttagttttatACACCCCTGGTTCAGTGACGTTTTGGAGGGTTTC
GCGGCAGATAGGGAAATCCAGGGAAATCCCCACAGCAAGgatgaattttt
tatcaaattcccAATTGTGATAGAAATTCAACCTAAAAATACAATGCGGA
TGGTTTAAGTGAGCAATTTTTGCATTGAACTTTAAATGGGGTGGACAATT
GGGCTGAAATTGCATTTaattagggtatttttcccactggGGATGAAACT
TTGACTAAATTTCCCAGAGGGTGGGGTCCTGCCATGTATGTGACACATGT
CTGTTTATACTTGGTACTCGTACCAGGCTTATCTTGCATCTATatggcaa
tgaattttaaaatatcATTATGTCATTATAAATAGGACACTGACTTACCT
CGTTATTTTCCAATTCAATTCTTTTCTATCATCTAGGTACATTCTCAAAA
AATGAAGCTGATATTCTTGGCTGTATCACTTATAGTGGTTACACTTGATG
CTTTACCAAAACACGGTATGATATTTTTTTAGTATCTGTTGACTAATCTG
ggtttaactaaggctccagtacagcgctaTAAGACCTTTTGATAGACTGG
GTGATTAGTAACTTAAGTGGACTCAGCGtcatgaaaaattataaattttc
attaattttgcggatttgggGGCGCCATGCGCGAAATTAAGTCTcgatgg
aaatttggaaagtcCTTATCCACGAAGAATGTTTAAGCTAAACTCAAAAC
TTGTAAATTTATAGTAAATTCATACTTGCCTTTACCAACTCTTAGCCTTC
TAGTCTCTATCTAGTTACAACCGGTCTCAGTATTTTTAATGAACATCATA
TTTTTTATACGCTACATATATATTTATCATACTCAATATCCAGGTGAAGA
GCCAATTGTAAAACTTtggatatacacgtttttttttttaagaaactagt
tttaccaagcaggctcaatgtttcttaagaaatcggccttttgagcctta
aatgtttcttacatgtttctaaactttgtcaagcttaaaggacgcatttc
gataatacaatagtctaattgactacacgcttctttttttttataagaat
acactttataagaatgtccatgatgaaaatggccaaaaaactaagaatat
gctaagaatatcaccatcatggaattttgctactNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtaaattatcaattatccccaagttaggctcactcc
ttttacaaaagtgccattttatgcttgagacgtatgtactaaatgttaaa
tctagtatgaataAGGATGAATgaatgtgctgtaagaatattttaggatg
attttcccaaaaaagttaagaatattaatgatgaaatggatttacaccat
tcttataaaaaaaaaaaagcgtgtaatctacggtactttcctatcttcta
tattgattttctgactttctcaagtgtttctaactgttatgtatgtatat
ttctggaaccttgattgaaaggttcttaaaaaaaACGAgttaaaaatgct
attttctcattctcagcctcagcatgtttcttagatgtttcttagttttt
aggcattctgagcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaa
cgtgtactgtgaAATATatcgttattattattattatttgagaTATATTT
TGATGTTTCGATAATGcactattttttatttatgaaaGTTTTCCTTCTAT
CGAAGATAGATTAGGTACACTTTTTCTATTGAAATATTAgaacaagaaat
aaaaaataagaaaaattgaatattaagTCTCGATGGAATATCTTAGTAAA
CGATTTTGTAAATATCTTAATAAGAGAGATACACCTTTACTTAccgagaa
atttttcaaagtcttgCAAAACTATCATTTTGCGTGTCCTTTTCTTATTT
AAAGAgccaaaatgaagaaatttagGTTTAATACCctatttttactattt
tgacccttaatttgaataaaaatttactCAGTATTGTTCttagattgttc
ttatttttgtgccttgttgttcttataaaatcattcttataaaaaaggct
aTATTTTACTAAATTAGTTTTTAAATCACAGCAGAACCAGTGAGTAATCC
TCCGTTTTATGCTGGATACttccagggatatgttatagcgtagctggata
acgcacatttgaaaaagccttgtcctatctctgtccctgacattaaaatt
tgatatgaaattaaacttttttaattacaaattcgtgaaatttggatttc
tttttagccaatgattctgctgctgcattNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacatccgaa
atttttaaagagaaaccatgaaagcttctcaaattcataacacacgctga
taaaattagatttcatttacaaagaagcttttggggtatctttttcaaat
attattttgatgaaaagcgggaacatcatagcaaaatatatgcaaacgta
ctgcatgaatactttgtctgcttaatttttcttataaaaacagagcACTt
taggggacagagatggatttttattatgaacagtttacaatagaaaagac
aaaggagcaatccgctaaggaattctcgtccttcatccagctacgctata
acatatccctgatacttctaaactttgatgaaaatcaaaacGCGACTTAA
AACGCCTAATTTATACTTCATCTCATCTTCGGCCAGACATTTGTTTATAC
ACTTTAAAGGGCGGTTTAACAAGACCCTTTTTAGACTATGACTTTTTTCC
ATTGTTCAGCGATATTGCAATCTTTTTTCCAGGCGTCTTTCGACCCCCGA
CGGAAATTGAAGTCAACGAGAAATTTTATCGTAAGTGATAGTACGCATAC
TTTACACAATGTTTTATAAAAAGGTCATACCCATTTCTTAACCATTTAAG
TACCAACCcttcctgtaatgcccagtttgagttagaaatcgtcattcttg
gtcgtaggaattggattgggtttcatggtcaagcaaaaaaaaaatcaaaa
gtaaaaaagacttttccaatgagaaaaaagaaagtaagaaaaatgcaaag
atttgacaaaaatccacttttttaagattttgaccgtttttgaccatttt
cggTCAACGAGtaatccaagaacctccaaaattAGCCCTGCtgtacttga
ttctgtcctctagcgaattaatttgaatttttactaCTGGGCTCCTTttt
atcattcaggcaggtccacCTAAATCTCTtaagctatccaacggactATA
AACGAGCTACAAACTCCTTCTAGCTCCGGAGacataagcctttaaagttt
gaactagcaattttctttgaaaaatgaccgtggtacttaaagggttaagc
tGTTAAATTCTTTCTTGATTTAAGTCCACTCAGCCTTTTTCCTTGACACA
TTTTTTAAACTGAATGATCACGAAATACTATATGATTTATGCTGATATAT
CCAACTATATCTTAATCTTAATCTATCTTAATCTTCTAAACAGgcctttt
atttaatttttctgttTACTTTAGATCGACATGGAGATATTGAGCGAATC
CAACATAATGATGGTAAGACTTTATTCCGGGAGGTTTACGATTTTATTGC
AGCCGTTGCAGCTTGGCCTAATTAAGCCCTATTTACATTCTGATTTAGAA
GTTGATCAAATTATCTTGGTAACCATGGCTTTGTATACATCTTTAGACAT
GCCCAGTATTGTCCACATAATCAATAGTTGACTTAAACTATGATTTGAAA
CTGGACTTCATGGCGTCTCCGTCCCAATCTTCGATCGAAATTAATCTATA
GTATTAGGTCTTTTTATGACTCCTTTTAACCACTATCCTAATTTCCTATT
CTTCTTTCTCTCCAAACTGTAGTGTCCAACTTCAAACGCCTTGCAAAGAA
ATTGAAACACATCATTGGAGAGACGAAAGTGTTGAAACGAGTACTTGATA
CAAGGAAGAAATTTGGTACGTTTCAAAGCTTAACCCGCTTTTTATCAGGG
GAGGGGTGATTTCCACCACCTTGGTGGTTGGTGGTTTTTTGTTAATAGct
cacagaaaaaaactttttttgacactgaaactttttgacatttaaCATAA
TCCTAATATGTATACCAAATGTTATCATCATACACCCactagatcaggtt
ttatgactgaGTATTTTGATTTTGTGTGGGCGTGTCATAAAGTCCaacta
aaaccctgtaaaatctcaaagttgaaattttcggTAAAAACCGACactaa
tttcattgttttttaacTTGTCCCCAGGTCACTTGAAAAGCGTAGCTGAC
GTCAACTACCATAGATACGGTATAATTCTtagttttgatatttaaatatt
ttatatatgttaacgatttgacataaaaaatttgcaccttgggtaggctg
ctggcatctaCTAAAGgatatactacctggggttttgtagaggtagGCTA
TTCAGACTATGCAAGTTGGGTGGAGTGGAAAAACTCAATTTAGTTACCAT
TCCTGAGTGTTTTTATAAGGTCAGACCATTTCATTCTTATCAATCTTGTT
CCTAGGTTATGAAGTCAGTAAGCAAATTAAAGCGGTGCCGGCGGcgttac
ttaatttttttttctaactcGCTTTGACAGGCCGAAAGAACGATATAATA
GAAAGTGAAAATCGTAAACGAAACAGCGTCAAAATCAACCTTTGGAATCC
AACACAACCCGGAGAACGATTAGTCATACCATACTCTTTCAGGTAAGATG
AAATCTTTCTCGTTAATTTTGCATTTAGCTGCAGTCTTTGTNTAATAGTT
GACTTAAACTATGATTTGAAACTGGACTTCATGGCGTCTCCGTCCCAATC
ATCGATCGAAATTAATCTATAGTATTAGGTCTTTTTATGACTCCTTTTTA
CCACTATCCTAATTTCCTATTTTTCTTTCCCTCCAAACTGTAGTGTCCAA
CTTCAAACGCCTTGCAAAGAAATTGAAACACATCATTGGAGAGACGAAAG
TGTTGAAACGAGTACTTGACTCAAGGAAGAAATTTGGTGCGTTTCAAAGC
TTAACCCGCTTTTTATCAGGGGAGGGGTGATTTCCACCACCTTGGTGGTT
GGTGGTTTTTTGTTAATAGctcacagaaaaaaactttttttgacactgaa
actttttgacatttaaCATAATCCTAATATGTATACCAAATATTATCATC
ATAAACCCACTAGATTAGGTTTTATGACTGAGTATTTTGTGCGGGCGTGT
CATAAAGTCCaactaaaaccctgtaaaatctcAAATGTTGAAATTTTCGG
TAAGAACCGACactaatttcattgttttttaactcgtCTCCAGGTCACTT
GAAAAGCGTAGCTGACGTCAACTACCATAGATACGGTATAATTCTTAGTT
TTAATATTTAAACATTTTATATATGTCAACGATTTGACATAAAGAATTTG
CACCTTGGGTAGACTGCTTGCATCCACTAAAGGATTTGTGCTCCTTAttt
actacctggggttttgatGTAGGCTATTCAGACTATGCACCTTGGGTGGA
GTGGAAAAACTCAATTTAATTACCATTTTATGCTtccctacacaaatttt
gcacccctCCTGTCTGCGCTACTATAATGCGTTAGTTAATTTCTTTATCA
TATCTCGCTTCGACAGGCCGAAAGAACGATATAATAGAAAGTGAAAACCG
TAAACGAAACAGCGTCAAAATCAACCTTTGGAATCCAACACAACCCGGAG
AAAAATTAGTCATACCATACTCTTTCAGGTAAGGTGAAATTTATCTCGTT
AATTTTGCATTTAATTGCAGACTTTTTTGTGGTATTCTCAAAGTGTTCTC
ataattcaaaatcaattttaatttattaaTGATTTTGTGCCAAGTGCTAA
TACTTTTTAACGCATTTCCATTTGTAATTTATTAATGATTTTGTGCCAAG
TGCTAATACTTTTTAACGCATTTCCATTTGTAATTTATTAATGATTTTGT
GCCAAGTGCTAATACTTTTTAACGCATTTCCATTGGCATCAGACTATATC
AAGTTCTTGCTAACCCAATAAAAAACGGATATTCGAACATCTCGTTCTAA
CCAGGTTATTTTTTCCGCTTTAGATCTGACTATCCAAATAGACTTCGACC
ATACGTTGAGAAAGCCATAAAATCCATGAATCAACATTTGAGATGTGGTT
ACGATGTTTGGGTACCTTACAGTAACCAAGCTCATCGTGTTGAGTTTATC
AAGGATGGAGGGTTTGTTATTCGACTTACTATTATTTATTTCCGAGTAGA
TTCTGATTACTCTGCGTTGGCACGTATTCACTATAAAGGTTGGTACTCTG
GGAGAAAATCCATAAAATGGGGGGTCAATATTAAGTGATTTTGGGGTGAC
TTTCCCAAAAAACCCTAGGAAAATTTATGGTCATTATAAAATTCTATTGG
AGTGTGTTTTCCGACAAAAATGCAAAGTGACCCCCTCCCCTACAATTAAG
CACAAATAAGGAGTTAGCGCACCGCTTTGATCTTTTCCAGTCAAATTTGG
GATGAATATTAAATAAGTTGAAATATTTTTATGGGACAAGAGATTTTCCT
GAAATTGTGATCAATGCTTAAGCAAATACTAGTGAAACTTCTCGGGATAT
TCATTTTTGAATGACGGGGGATTTTTCAATTGTCGAAACAAAAAGTTTTT
TCTCTTTTCAGTTGTTACAGTTTATTGGGCAAAGACACCAGTGAAGGGAA
TAAACAACCAATCAGTATCGATGATGGATGCGAAGCAAAACGTGAGTGAT
ATGCACTTTTTTCGACTGTAACCACCAATTGCATTTTATTTTTCGTTTTT
TTCCACTAAAACCGTCCCAGTCCTTTTTTCGCACCTATAAACAATAGAAA
AATGTATCAAAAAAGGATTGGATCGAGTTTAGGGGGTAATTAAAGGGACA
TTAAAGTAGTAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAAAAA
ACAATTAAAATCACGTGTCCAAAACAAACTTGTAAAACAATTGAACAATC
AAAATTAGCCATATttggtttgattttttattttgacatgtgacatttgt
tttgattttgtatccgctgcatacagtttgtttacaaatttcgcaagtac
tgttatgtccctttaaatacgcgcgactacggtcgaaaaggtgtattttt
atGTTATCGTATTTTTCTGATTTACAGTCGAGAAGTAAGCTTGTTACTCT
TCACTTTTtactcacagacccggtgggggTAAATATAACAGACCAAAACT
AGATGCTTTTTTTATGGCTTGGGATTTGGATTTGTTTTCGAATTTAGaat
atgattttgatattttgataccAATTTTTCCAATCGGAAGGAGTCGAATc
tatgagaaaggggtgtataaTTCTCTTGTGGTGATGGTGAAAGATGCATT
GAAACGGGATTGACACATTCACATTGTTTACTGGTTCAAAAGATTTACAG
TCGACATTCAACAACTCGAACATGAAAGGGGAAAGAGGAAAAAATCATTC
GAGTAAGGAGGGTTATATCATAGTCACTAGAATTGACATTGGTTAAATTT
ATAGATAAACTAAATAGCCCTAAGACTTTTTTCATGAGTTCAGGTTCTTC
TGTATAAACGTCAAATGAACGTTAAAAAATATTACGTACCAGCACGACTG
CTATATCATCATAAAACTTCTTTTCTTTTGCTAGATATTGTTTTGCACGA
AATGATGCATGCAATGGGATTCTATCATGAACAGAATCGCTTCGATCGTG
ATCAATTCATCAAAATCAACTGGAACAATATTCAAGACGGTAAGTTTCTT
ATCTCTAAATAACTTTTATCCCTGAGGTGATTATTCTGTCCAAAGAGCCT
GTGCAGGTTTATCTTTAGGGACATGTCGTAAATACATGGAGGACGAAAAA
CTAGTCTCTTGTAGGTTGTATTTAATGGAGAAATCATCAGGAAAACATGT
AATTTTAGTCCTATTCTCAGGGGTACCTTTGATCACTAATTTTTACAACA
AACGATACTATATTGGTTTTATGGATATTCAATACTGTTTTTTTCCCGGT
AAACTCAAAACCCATCAAAAATAGATAATTAAGAAAATTAGATATCTGAA
CTGGCTGAGTTTTCTCTATTTAGGTATGGCAAGTCAGTTCGACAAAGCAT
CAAATAACAACATCTTCCAAACTAGCGTGGTAAGAGTTCTCTTTCTTATT
GTTCTACGGTTAACTCAAATTCGTCGATTGGATTTCACTTCGCAAAtctt
aaactttaaaaatttcataTCTTCATATCGACTGTTTAGCGAATCAACTG
AGCATGAGTTCATCTCATCTCTTTGACTAGtgttattttaatttattttt
gggACTGGAAAAGTTTTTCGCAAAAGGCGAAAATCGGCAAATCATAAGCA
GATATTATACATTTTATacaattaaattcaaaataaatccGGGTTATGTT
AAGGAACATTTCACATTATCATATATCACCTTTAGTAGTGTGTAGTAGCA
CTTATTATGTCCATCAGCTGACACGTGTTTTGTCCTATTCAGAACTGGCA
ATGCAGCTTGGTGAATGAATATAGACTACTGACTAAACACTAAATATTAA
CTAATGCCTTATCGCTTTTGGTGAATGAACTAGCGTAGCCTTGCTCCTCA
ACATAATCCAATAATACGcactatacatgttttttagaagcattgcactt
ataggcatgtctaggctcagatatggcaaaaatttaagtcTAATTTAAGC
ATCACCTGAAGCCTACGAATAAATgtattttccagatttttgctgttttt
ggctGAGATTTTACGGATCTTCggaattttcctaaaattttgcTTGTGAT
ATTAGCATCCTTATAAGCTTTTTTTAGCCTTGTCAAGCCCTCGACCTAAG
CATCTTCGAGCCTGTTTTCGaatttatgcttattaaaaaaacatgttaat
GCCTCTTTTTTTTGCTATACATTACAGCCATATGATTACATGAGTGTTAT
GCACTACTCTTTGTCATCATTctctaaaaatggtcaaaacacCATGACGA
TCTTGAAAAATGCTCAGAGTGCAAAGTTAACGGCACAGGACTTACGAATC
CTTGGAGACGTTCCCGATTTATCTGCAGAGGATTTACAAGAAGTTAGAGC
TTATTTCAACTGTAAGTAtctaacacccctgtgtcacagacccgctggga
ccccaacCTAATGAAACTTTCCCACAGCGAAgataaaattttagaaatct
ttgaaaagttaGAGCTtacttcaaaaagtttgtcTAATAGGCCCCGATCC
CCGATGAAACTTtcgaaaaatccagtggggatgggtttagagtgcaattt
tttatatttgattttggATGGggttgaaatcaaagtcaatttcccagtgg
ggccgGGGTTTCAACacgtctgtgacacaggggtgttatctTTCAAAAGT
TTGTCAAATCTATTCATATTGATATGGAATACCCATGTTTCATTCTGTAC
TTCAACAAATGTGTTATAATCTCCGACTTTTCTCTCTCATTTTTTTCCGA
AAGTATTCTTTATCATCCCTCTCTAAATCGATCTTTAAGTGGCCAAAAAT
TGTCTTCGAAatagagaaagattcaaattacaAAGACTGTTTTATACTAA
TTTCAACCTGAGGTATCAATAtttcgaattacaaaaagattTGAATAGGA
GAGACTCGAATAAGAGAGAGTTGACagtatttcatttttgaaaacgatAA
CCATTAGGTAATTCTGCCGGTGGCCGAACAACAGCACGACCAGCACCACG
AACAACAGCACGACCAGCGCCACGAACAACCCGAAGACCTGCAACGAATC
GTCCACGAACAACCCGAGGAACAACAGAAACAGGAGGTGAAGCTACATGG
TCATGGGTATCTGACGGATCAACAGAATCATATGGTACTGATGCTACAGA
ATCATATGGCACAGAATCATATGGTACGGAGGCTACAGAAATTTATGGTA
CAGAGGCTACAGACATTTATGGTACTGAGGGTACAGAATTTTATTGAGGC
TCTCAAGGTCCAGAACTTGTCTGGAGCTGATAATGGAGCTGATGATGACG
CTATATACTCAATGCTCTAAAGAATATTTCATATAAAGATATCTTTCAAA
GTAGGGAACAATGGATTTGATGGTTAAAATCTATATATTGCTATTTACTA
ATTTGAGATATAGATCTtatatgaattatttttcaagccgaaaatatttt
caagttgTATTTCTATAGTTTTATATCGATCTATTTATTCGCTAATTTAC
GTAAACtttttttgtaacctttttttACATGTaacatttcgaaatttatt
tcttttgatatttacATATTCAAACTCAGATTCACTTTCAAACCATTTTA
CGAATAGACCTTGGAAAAGTCCTCTTTTAAAAAACCAAGAAAATATGCAA
AGTAAATATGTCTGTGGCCCAAAAGCTTCTCATTGATAGCTAACTGATGG
TAGGGGAGGGCACTACTTTTCTGGTGTGAGCAAAAGCATCATCAGacaaa
ttagttcccgcaaaaaatagTTTATTTAAGGTAAAACATTTTACTCTTgc
tctttttttctcttcaaaatGGAAATTGATAACATTTGAAGGTTCTTTTT
CAAAGTGTTTATTCTTAGATTCGTTTCtttattcaaaacattttaatcAA
TCTGACAAATCGATAAGCTCGAACTCTCCAACAGTAGTTTCAGCTTTCGT
GGTTTCTCCGAAAGTGATAGAACGAGTTTTTGGTTGGTTTTGTTTAGCTG
CTGCTTTTCTTTGTCGTGCCGACCGTCTTCGGCTAGCCGACCTTTTTCGT
TTTGCCGATGTTGATCGTTTTCGGGAAGAAGATCTCTTACGGGAGGCAGA
ACGTTTTCGTTTTGCCGAGGCTGATCGTTTTCGTGTCGGTATAGCCGACT
TTTGTCGTCTAGCACGTCGCTTTTTGGAAACCGATCTTTTTGGTGTGCAG
TATATTTCTTGAGGAACGTCGGTGGGTGGGGTCGATGGTTTTGCCGACAC
AAGACGTTTTCGAGAAGTGGACTTTTTTCTCGAGGCTGACCTCTTTCGGG
ATCCTGATCTTTTCTGGGAGTTTAATTTCTTTGAAGAAGGTGTTGATTGA
CTTTCCGTTAAAGTTTGAACCAACTTTTTCGTTTCTTGGTTTGTTTGCTT
ATTAACAACAGCCGCCGACTGGCTTCGTTTAGCAGAACGAGAACGTTTTC
GTCTTACCGAATGACTTCTGCGTACCGATGGTGATCGTTGTCGTGCAATA
CTCGGTGAACTCTTTCTTCCATAAGTTCTACGTCGACGATTCGATCCCGA
TCGTTTTCGAGATGCCGAACGTTTTTGGGACACTGCTCTCGGGCTTTGTG
AACGAGCACGTTGACGTGAGATTGAGCGCTGGTTACGTGAGCGGGATCGT
TGTTTACGAGACATGGGACTACGTCTTCGTGATAAAGATCGTAACCTACG
ACCTGGAGATCGTCCGCGTCGTCCTAAAGATTAAGAATAAGAACTTTGTT
TAGTTTTATGGTGGAAGATGATCAACTATACTATTATGTATTTGGCATGC
ATTAACATTACAATGTTTTCAACATCTTCAACATAAGTTTTATACTTACT
TAATGCTCTACTTCTGGTTCGCATCTTGAAAAATGTTGCtgacaaagaaa
gaaaaagtcgGTGCTTTGTGCTTGTGTATGTACTAGATAACCGGTGGTGT
TTACTTGGTTGAGAATACAGTTGTTAGAAAGTATTGCACAAAGTTACTTG
AACTCTACTTAattaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039287XLOC_039287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062685-exon-scaffold_371-1491911889:428495..429035TCONS_00062685-exon-scaffold_371-1491911889:428495..429035Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:428495..429035TCONS_00062685-exon-scaffold_371-1510915933:428495..429035Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:428495..429035TCONS_00062685-exon-scaffold_371-1575043694:428495..429035Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:430131..430209TCONS_00062685-exon-scaffold_371-1491911889:430131..430209Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:430131..430209TCONS_00062685-exon-scaffold_371-1510915933:430131..430209Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:430131..430209TCONS_00062685-exon-scaffold_371-1575043694:430131..430209Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:433427..433474TCONS_00062685-exon-scaffold_371-1491911889:433427..433474Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:433427..433474TCONS_00062685-exon-scaffold_371-1510915933:433427..433474Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:433427..433474TCONS_00062685-exon-scaffold_371-1575043694:433427..433474Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:434169..434207TCONS_00062685-exon-scaffold_371-1491911889:434169..434207Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:434169..434207TCONS_00062685-exon-scaffold_371-1510915933:434169..434207Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:434169..434207TCONS_00062685-exon-scaffold_371-1575043694:434169..434207Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:435588..435680TCONS_00062685-exon-scaffold_371-1491911889:435588..435680Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:435588..435680TCONS_00062685-exon-scaffold_371-1510915933:435588..435680Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:435588..435680TCONS_00062685-exon-scaffold_371-1575043694:435588..435680Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:435988..436029TCONS_00062685-exon-scaffold_371-1491911889:435988..436029Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:435988..436029TCONS_00062685-exon-scaffold_371-1510915933:435988..436029Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:435988..436029TCONS_00062685-exon-scaffold_371-1575043694:435988..436029Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:436311..436422TCONS_00062685-exon-scaffold_371-1491911889:436311..436422Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:436311..436422TCONS_00062685-exon-scaffold_371-1510915933:436311..436422Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:436311..436422TCONS_00062685-exon-scaffold_371-1575043694:436311..436422Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:436768..436905TCONS_00062685-exon-scaffold_371-1491911889:436768..436905Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:436768..436905TCONS_00062685-exon-scaffold_371-1510915933:436768..436905Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:436768..436905TCONS_00062685-exon-scaffold_371-1575043694:436768..436905Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:437356..437435TCONS_00062685-exon-scaffold_371-1491911889:437356..437435Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:437356..437435TCONS_00062685-exon-scaffold_371-1510915933:437356..437435Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:437356..437435TCONS_00062685-exon-scaffold_371-1575043694:437356..437435Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:438379..438483TCONS_00062685-exon-scaffold_371-1491911889:438379..438483Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:438379..438483TCONS_00062685-exon-scaffold_371-1510915933:438379..438483Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:438379..438483TCONS_00062685-exon-scaffold_371-1575043694:438379..438483Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:438818..438873TCONS_00062685-exon-scaffold_371-1491911889:438818..438873Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:438818..438873TCONS_00062685-exon-scaffold_371-1510915933:438818..438873Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:438818..438873TCONS_00062685-exon-scaffold_371-1575043694:438818..438873Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:439672..439855TCONS_00062685-exon-scaffold_371-1491911889:439672..439855Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:439672..439855TCONS_00062685-exon-scaffold_371-1510915933:439672..439855Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:439672..439855TCONS_00062685-exon-scaffold_371-1575043694:439672..439855Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1491911889:440452..442512TCONS_00062685-exon-scaffold_371-1491911889:440452..442512Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1510915933:440452..442512TCONS_00062685-exon-scaffold_371-1510915933:440452..442512Clytia hemisphaericaexon
TCONS_00062685-exon-scaffold_371-1575043694:440452..442512TCONS_00062685-exon-scaffold_371-1575043694:440452..442512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:428495..442512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13201	1.88763	0.551956	0.368303	0	0	0	0	0	0	0	0	0.136455	0.104139	0.173728	0.0574979	0	0.118045	0	0	0.151516	0.223773	0	0.503975	0	0.154149	0.660133	0.707943	0	0.18197
Blast
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BLAST of TCONS_00062685 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 110.153 bits (274), Expect = 3.893e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 2 
Query:  848 KNDIIESENRKRNSVKINLWNPTQPGEKLVIPYSFRSDY--PNRLRPYVEKAIKSMNQHLRCGYDVWVPYSNQAHRVEFIKDGGCYSLLGKDTSEGNKQPISIDDGC--EAKHIVLHEMMHAMGFYHEQNRFDRDQFIKINWNNIQDGMASQFDKASNNNIFQTSVPYDYMSVMHYSLSSFSKNGQNTMTILKNAQSAKLTAQDLRILGDVPDLSAEDLQEVRAYFNCN 1522
            + DII     +  S   N W P      + +P+   S Y  P+R     +  ++++ +  R     +V Y +Q   +  I   GC+S +G+    G  Q +S+   C  + + IVLHE+MH +GF+HE  R DRD++I++NWN I  G    F K+ ++N+     PYDY SVMHY   +FS+ G  T+T         L A  + I G   +LSA D+  V   + C+
Sbjct:   75 EGDIIRPSPFRLLSATSNKW-PMGGSGVVEVPFLLSSKYDEPSR-----QVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRS---GGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML---TPYDYSSVMHYGRLAFSRRGLPTIT--------PLWAPSVHI-GQRWNLSASDITRVLKLYGCS 282
The following BLAST results are available for this feature:
BLAST of TCONS_00062685 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL3.893e-2531.88Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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