|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062617 ID=TCONS_00062617|Name=TCONS_00062617|organism=Clytia hemisphaerica|type=transcript|length=8881bp transcript from alignment at scaffold_370:47651..79667+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00062617 ID=TCONS_00062617|Name=TCONS_00062617|organism=Clytia hemisphaerica|type=transcript|length=32017bp|location=Sequence derived from alignment at scaffold_370:47651..79667+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00062617 vs. Swiss-Prot (Human)
Match: SDK1 (Protein sidekick-1 OS=Homo sapiens GN=SDK1 PE=2 SV=3) HSP 1 Score: 604.364 bits (1557), Expect = 1.691e-176 Identity = 470/1674 (28.08%), Postives = 752/1674 (44.92%), Query Frame = 1
Query: 295 VTLPCSAEGTPSPKIVAWLFDGKRVNTRSGRHFLRPNGDLYITNTQKSDSGTYQCVAQNTVGGIASTKKKLFVTYFDYYNKGNAPEQVSKSENEYYIAKVPNIQIYPRELTRHTWYKDGSILKESERAQISEHGDLYLSQLKYQDRGTYKLTVENTFMSTLGKTYAEQDVVEF-QLTIQGEIRPSE---PTVIYSTGRKT--AGEKQDPFVIIECFITGVASGAPSIAWIKEDPFGGKPKTIFNGGRYEKQLG--GRRLKITDPNNLEDNGMYKCLPEYGLSTYEKQAKMIDLVVSSIPVFSTKP-GEYEAYTDSSATLNCLVTGLPTINITWYRNGIPMTHSSD-SHAVLKNNSIELIGLNWEDNGIFQCGAENYAGLFFVNQQLKVQNISAEIIGWSPKYYIHFNLAATIPCKTIGAPKPKITWLVNSTKIEQNS----KYSFNKNGSLVIQNIQASDQGKYTCTASNYIDTDYKSADVYAVVKTRISKFPGKEFPVVKGDSPIIPCEVEHDKRVNYTREWRKVGITI-PKTDKRYVMMEDGGLRVNFVKLDDTNLEFSCHIFADDANLTAATVLVMESRPFQPSSPRVNGEPKPNS-----LDLIWDAPDDGGSPIISYLLKMKNYTQTMYYKLADIDAPQTTYTVNNLQAGSKYRFQVAAKNKFGYGEYSAEATVWLETKTTAPSGPPLEFRSVDADTDYIVLRWEPPLPEKRNGQLDGYIFRYRVV-TTSSYVTRKLNSLDTEYKM-DGLPLFTKFEVQIAASNEIGIGPYTDSVFIETLQGKPVAPPTDVKVSIVNSTTVLVSFKSPRQALWNGKLTRIVALYWPPDVPEDQQTYETNYDTSNIHSQQFYLPRLEADKEYVLAVQVKTTGGPSPGSEKVQFKTTEGRPDSVRDLTVLKTYSDAFSVTWKPPLKPGGTLQGYKCEYRIASGKWVEVKEIIKGTEIGVVVKNLEPLTKYEVRVLAYTNAGDGSWEVRSATTIEKPELPHAPSSLKAYNVWGTVIALGWTPGYSGRAVILQYQIQYNNDTDYHQNPSRALWREMKNL-TKILENPANLTYLQPNAVYRFRMRAYNRLGASGWSNISVDISTGEGVPSSKPRGLIVTAPARQTLEIKWIPPPRDTWNSDSVKYQFLIHPKAQDLKKISRDQYHVLTDNEATSYAASGLQRFTMYNVTMRLFNNKGYGPWSKHIFFRTSEDYPSGYPMNVRADVQSASSVLVKWGPVPEDQRNGFIIGYKVFYELKGFPTTEMFEDFPGNTTFSGTITKLNGYTDYEFRVMAYTKVG-GLLKSPPVTRKTFEGKPGKPTNVRFIDVNYQYVQLEWDPPLNPNGRLSRYRVNYRQKGSS-GDWTQVPVSTFNPRSARVNGMVFNRVYEFKIEATNSIGWGEPAIEEVLVTTERSVAQSPVILAIPSTSIRHTSVIVEWRARFDGNAPIRGYNLQFNKDLTG-WQNYKHGIPPVENIGRDINKLEVLYLKPGMKYQFRVRAINDLGYSDWSESSRSVRTIQNEQKGAPRNVRVTKKTPTTLTIAWERPEELDLSSPIAGYRIQYQWLQ----------SIASPLL-------------VNTDDQTFEYTLKGLKVFSLYEVSVVVFTQLGAGTQTQPYKWRTGESKPTAEPTNVDVVMQGKSSVRVTWKPPDEESVRGYIRGYKI 5169
+ L C AEG+ P W+ D + T S + I + QK D+G Y+CV +N +G + K ++ V Y + + + VS+ I + I YPR + TW+++G + S R I+ L + D G Y ++ + + E F L+I ++ E PT++ G ++ AG + +EC + S+ W + NG R L GRRL I++P + D G Y C S +E L + P F+ +P A + + + C G+P + WY++ I ++ + + VL + + + L ED+GIFQC A N G + L V NI+ + + A + C+ GAPKP ITW + + S ++ ++G L I + D G YTC A+N + SA + +T I P ++ V+KG + + C HD RV+ W+K + + P + R V+ +DG L ++ D ++SC I ++ N + L + P P + V+ PNS + L W P DG SPI+ Y++++ L+++ T TV+ L Y+F+V A N+ G G+YSAE T L PS PP + I+++W+PP + NG L GYI RYR+ Y R + S + Y + L ++T++E+Q+AA N G+G ++ +V TLQG P APP +V+ VNSTT+ + P Q NG L WP D PE D +H ++ L+ Y +V TT G P S T E +P +V L+ + + V+W+ PL+ G + GY+ + + + + T ++ L LT Y + V A T G G + ++ P+LP APS+L N+ L + PGY G+ I ++ ++ + L+ E ++LE P NLT P YRFRM+ N +G S +S S I T + P P + V + +L ++W+P P +N + + I DL+ + Q V++D + L+ + Y + M+ FN G GPWS+ + RT E PS P NV A+ S++ +L+ W VPE +NG I+GYK+ + K GN T S + L + YE +V+A+T++G G+ +P + +T + PG P + F +V V++ W PP PNG + Y++ YR SS +T V V R + Y F++ A GWGEP V+ T +R P L +P + S+ ++W DG +PIR + +Q + G WQ Y +I + V L+P Y+ R++A ND+G SD+S + +V T+Q+ P +V T T +++ I W+ P + L+ + GYRI Y+ L+ ++ +P+ VN+ + L LK + YEV + + +G + P + GE+ P P NV V S + VTW PP ES G I+GYKI
Sbjct: 122 LVLTCLAEGS-WPLEFKWMRDDSELTTYSSEY------KYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAA--ILNLLPITSYPRP--QVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAY-------YVQAVNEKNGENKTSPFIHLSIARDVGTPETMAPTIVVPPGNRSVVAGSSE---TTLECIASARPVEDLSVTWKR------------NGVRITSGLHSFGRRLTISNPTS-ADTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVH-PPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIG-DYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVS----PNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAE-TSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVH--HGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTQEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEVYGRNDSRLTHTLNSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP-NLT---PYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ--VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPHTFTTVEVGA-TVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYS------SSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKI 1739 HSP 2 Score: 196.052 bits (497), Expect = 1.558e-49 Identity = 224/912 (24.56%), Postives = 383/912 (42.00%), Query Frame = 1
Query: 2128 TMYYKLADIDAPQTTYTVNNLQAGSKYRFQVAAKNKFGYGEYSAEATVWLETKTTAPSGPPLEFRSVDADTDYIVLRWEPPLPEKR---NGQLDGYIFRY-RVVTTSSYVTRKL-NSLDTEYKMDGLPLFTKFEVQIAASNEIGIGPYTDSVFIETLQGKPVAPPTDVKVSIVNSTTVLVSFKSPRQALWNGKLTRIVALYWPPDVPEDQQTYETNYDTSNIHSQQFYLPRLEADKEYVLAVQVKT-TGGPSPGSEKVQFKTTEGRPDSVRDLTVLKTYSDAFSVTWKPPLKPGGTLQGYKCEYRIASGKWVEVKEIIKGTEIGVVVK-----NLEPLTKYEVRVLAYTNAGDGSWEVRSATTIEKPELPHAPSSL--KAYNVWGTVIALGWTPGYSGRAVILQYQIQYNNDTDYHQNPSRALWREMKNLTKILENPANLTYLQPNAVYRFRMRAYNRLGASGWSNISVDISTGEGVPSSKPRGLIVTAPARQTLEIKWIPPPRDTWNSDSVKYQF-----------------LIHPKAQDLKKISRDQYHVL-TDNEATSYAASGLQRFTMYNVTMRLFNNKGYGPWSKHIFFRTSEDYPSGYPMNVRADVQSASSVLVKWGPVPEDQRNGFIIGYKVFY-ELKGFPTTE----MFEDFPGNTTFSGTITKLNGYTDYEFRVMAYTKVGGLLKSPPVTRKTFEGKPGKPTNVRFIDVNYQYVQLEWDPPLNPNGRLSRYRVNYRQ----KGSSGDWTQVPVSTFNPRSARVNGMVFNRVYEFKIEATNSIGWGEPAIEEVLVTTERSVAQSPVILAIPSTSIRHTSVIVEWRARFDGNAPIRGYNLQFNKDLTG-WQNYKHGIPPVENIGRDINK--LEVLYLKPGMKYQFRVRAINDLGYSDWSESSRSV 4734
T+Y + + DA + NL + YRF++ N G YS + V ++T P P A + LRW P LP+ + N + GY +Y R SS V + + + L+ E+ ++ L + ++E+Q+ A N +G GP+++ V T + P A P +V V+ST +L+++ S + NG + L+ D+ + +++ + H+Q L L Y L V T G P + + +T + P L + + + W+PP +P G + GY+ YR+AS E+G V+ +L P + Y R+ A T G G + T EK E P P L V + L W PG G + I + +Q + R W+ + + L+P Y+ R++A N +G S +S+ + ++T + VP P + T ++ I+W PP ++ N Y+ L +P A + ++ + + + + +T + L+++ Y V M +N G P S + E P+ P NV+ +AS + V W P P + +NG I GYK++Y E TE +F P + L +T Y + A+ G KS P +T + PG P+ + F ++ + + W P NG L YRV Y +G S T V V R +V + Y F+++A +I +G + SP + + ++ + + ++W G+ P GY ++ G W + V++I R L + L+ G+ Y+FRV A+N+ GY + S S +V
Sbjct: 1120 TLYEEENEPDA--QMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRV-IQTLQAPPDVAPTSVTVRTASETSLRLRWVP-LPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGN----HTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSS----PHTFTTVEVGATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQV-------RELPRGEWQTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEP-----VVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVT-VEVRGNWQRWLKVRDLTKGVTYFFRVQA-RTITYGPELQANITAGPAEGSPGSPRDVLVTKSA---SELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMF------VKDIPRSATSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAV 1996 HSP 3 Score: 194.126 bits (492), Expect = 5.602e-49 Identity = 391/1735 (22.54%), Postives = 664/1735 (38.27%), Query Frame = 1
Query: 325 PSPKIVAWLFDGKRVNTRSGRHFLRPNGDLYITNTQKSDSGTYQCVAQNTVGGIASTKKKLFVTYFDYYNKGN----APEQVSKSENEYYIAKVPNIQI------YPRELTRHTWYKDGSILKESERAQISEHGDLYLSQLKYQDRGTYKLTVENTFMSTLGKTYAEQDVVEFQLTIQGEIRPSEPTVIYSTGRKTAGEKQDPFVIIECFITGVASGAPSIAWIKEDPFGGKPKTIFNGGRYEKQL-GGRRLKITDPNNLEDNGMYKCLP--EYGLSTYEKQAKMIDLVVSSIPVFSTKPGEYEAYTDSSATLNCLVTGLPTINITWYRNGIPMTHSS---DSHAVLKNNSIELIGLNWEDNGIFQCGAENYAGLFFVNQQLKVQNISAEIIGWSPKYYIHFNLAATIPCKTIGAPKPKITWLVNSTKI----EQNSKYSFNKNGSLVIQNIQASDQGKYTCTASNYIDTDYKSADV---------------------YAVVKTRISKFPGKEFPVVKGDSPIIPCEVEHDKRVNYTREWRKVGITIPKTDKRYVMMEDGGLRVNFVKLDDTNLEFSCHIF-ADDANLTAATVLVM--ESRPFQPSSPRVNGEPKPNSLDLIWDAP--DDGGSPIISYLLKMKNYTQTMYYKLADIDAPQTTYT-VNNLQAGSKYRFQVAAKNKFGYGEYSAEATVWLETKTTAPSGPPLEFRSVDADTDYIVLRWEPPLPEKRNGQLDGYIFRYRVVTTSSYVTRKLNSLDTEYKMDG----LPLFTKFEVQIAASNEIGIGPYTDSVFIETLQGKPVAPPTDVKVSIVNSTTVLVSFKSPRQALWNGKLTRIVALYWPPDVPEDQQTYETN----YDTSNIHSQQFYLPRLEADKEYVLAVQVKTTGGPS-PGSEKVQFKTTEGRPDSVRDLTVLKTYSDAFSVTWKPPLKPGGTLQGYKCEYRIAS----GKWVEVKEIIKGTEIGVV-VKNLEPLTKYEVRVLAYTNAGDGSWEVRSATTIEKPELPH--APSSLKAYNVWGTVIALGWTP----GYSGRAVILQYQIQYNNDTDYHQNPSRALWRE-------MKNLTKILENPANLTYLQPNAVYRFRMRAYNRLGASGWSNISVDISTGEGVPSSKPRGLIVTAPARQTLEIKWIPPPRDTWNSDSVKYQFLIHPKAQDLKKISRDQYHVLTDNEATSYAASGLQRFTMYNVTMRLFNNKGYG-PWSKHIFFRTSEDYPSGYPMNVRADVQSASSVLVKWGPVPEDQRNGFIIGYKVFYELKG-----FPTTEMFEDFPGNTTFSGTITKLNGYTDYEFRVMAYTKVG---GLLKSPPVTRKTFEGKPGKPTNVRFIDVNYQYVQLEWDPPLNPNGRLSRYRVNYRQKGSSGDWTQVPVSTFNPRSARVNGMVFNRV-----YEFKIEATNSIGWGEPAIEEVLVTTERSVAQSP--VILAIPSTSIRHTSVIVEWRARFDG--NAPIRGYNLQF----------------------NKDLTGWQNYKHGIPPVENIGRDINKLEVLYLKPGMKYQFRVRAINDLGYSDWSESSRSVRTIQNEQKGAPRNVRVTKKTPTTLTIAWERPEELDLSSPIAGYRIQYQWLQSIASPLLVNTDDQTFEYT------LKGLKVFSLYEVSVVVFTQLGAGTQTQPYKWRTGESKPTAEPTNVDVVMQGKSSVRVTWKPPDEESVRGYIRGYKI 5169
P P+ V W +G ++ S R + L I T SD+G Y A N G K F+ + G AP V N +A + P E TW ++G + S L +S D G Y + G + F I+ +EP + + E ++ V I C GV P++ W K+ + RY+ GG R++ P ED+G+++C E G E Q V + PVF+ +P + +A L C V+G P ITW R + S +L++ +++ + +D G + C A N G + L V N ++ I+ + + AT+ C P+ + ++ + S+ K+GSL+I + D G Y+C + D + A + +AVV + + F G+SPI+ VE + W K V E G+ V+ + T C + +A T +M E P P V S+ + W P + + Y+L+ + Y+ +I +P+ Y V +L ++Y QVAA N G G +S T + T P+ PP ++ ++ I W PP + NG GY VT + D G L FT + + G GP + + T + KP A + + + T++ VS++ P + NG +T + W + Y N T N + ++ + L + Y + V T G S + P + +L + + ++ ++P ++ + E ++ + +WV + E + ++ + NL P T Y R+ G + S+ I+ + P AP+S+ T + L W P Y+G + Y+I+Y WR + ++ LE + L+ Y +M+A+N +GA WS + V T E VPS+ P + A + + + W P N + Y+ L +A+DL R H++ N S +GL++F +Y + + F G G P + I RT +D P G P+ + +SV + W P PE+ NG I+GY++ Y L F T E+ G T T T L + Y FR+ A T+ G L + T K P + V +V + ++L+W P + + + + R+ G+W S S V +R+ Y+ +++ATN IG + + E VTT + V P + A P T+ +SV+++W+ D N ++GY + + + +LT ++K N E+ +LK +Y+ + A N +G S S + V + AP+NV+VT T + L + W+ P + I GY+I Y W + T+ + LK L + Y VS+ F G G ++ P + RT ++ P A P+ + +++ V+W P + G ++GY++
Sbjct: 219 PRPQ-VTWFREGHKI-IPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNG--ENKTSPFIHLSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLH---SFGRRLTISNPTSADTGPYVCEA-----ALPGSAFEPARATAFLFIIEPPYFTAEPE------SRISAEVEE-TVDIGCQAMGVP--LPTLQWYKD----AISISRLQNPRYKVLASGGLRIQKLRP---EDSGIFQCFASNEGG----EIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTS-IVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPF--------DGNSPILYYIVELSEN---NSPW--------KVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEY--TLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTQEDKPGAV-GHLSFTEILDTSLKVSWQEPLEK--NGIITGY-QISW--------EVYGRNDSRLTHTLNSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYS-PSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKY--------------WRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV-VRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILF--RAKDLDPEPRS--HIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP-PEEP-NGIILGYQIAYRLASSSPHTFTTVEV-----GATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVREL-PRGEWQTYSSSI----SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT---SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFK-----TVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPAS-APVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKI-YYWEADSQN----ETEKMKVLFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWGEP--AAANGILQGYRV 1837 HSP 4 Score: 181.415 bits (459), Expect = 4.410e-45 Identity = 367/1680 (21.85%), Postives = 636/1680 (37.86%), Query Frame = 1
Query: 637 WYKDGSILKESERAQISEHGDLYLSQLKYQDRGTYKLTVENTFMSTLGKTYAEQDVVEFQLTIQGEIRPSEPTVIYSTGRKTAGEKQDPFVIIECFITGVASGAPSIAWIKEDPFGGKPKTIFNGGRYEKQLGGRRLKITDPNNL-------------------EDNGMYKCLPEYGLSTYEKQAKMIDLVVSSIPVFSTKPGEYEAYTDSS-ATLNCLVTGLPT--INITWYRNGIPMT---HSSDSHAVLKNNSIELIGLNWEDNGIFQCGAENYAGLFFVNQQLKVQNISAEIIGWSPKYY-------IHFNLAAT--IPCKTIGAPKPKITWLVNSTKIE--QNSKYSFNKNGSLVIQNIQASDQGKYTCTASNYIDTDYKSADVYAVVKTRISKFPGK--EFPVVKGDSPIIPCEVEHDKR--VNYTREWRKVG---ITIPKTDKRYVMMEDGGLRVNFVKLDDTNLEFSCHIFADDANLTAATVLVMESRPFQPSSPRVNGEPKPNSLDLIWDAPDDGGSPIIS--YLLKMKNYTQTMYYKLADIDAPQTTYTVNNLQAGSKYRFQVAAKNKFGYGEYSAEAT---------VWLETKTTAPSGPPLEFRSVDADTDYIVLRWEPPLPEKRNGQLDGYIFRYRVVTTSSYVTRKLNSLDTEYK---MDGLPLFTKFEVQIAASNEIGIGPYT-DSVFIETLQGKPVAPPTDVKVSIVNSTTVLVSFKSPRQALWNGKLTRIVALYWPPDVPEDQQTYETNYDTSNIHSQQF---YLPRLEADKEYVLAVQVKTTGGPSPGSEKVQFKTTEGRPDSV-RDLTVLKTYSDAFSVTWKPPLKP--GGTLQGYKCEYRIASG----KWVEVKEIIKGTEIGVVVKNLEPLTKYEVRVLAYTNAGDGSWEVRSATTIEKPELPHAPSSLKAYNVWGTVIALGWTPGYSGRAVILQYQIQYNNDTDYHQNPSRALWREMKNLTKILENPAN---LTYLQPNAVYRFRMRAYNRLGASGWSNISVDISTGEGVPSSKPRGLIVT--APARQTLEIKWIPPPRDTWNSDSVKYQFLIHPKAQDLKKISRDQYHVLTDNE----ATSYAASGLQRFTMYNVTMRLFNNKGYGPWS-KHIFFRTSEDYPSGYPMNVRADVQSASSVLVKWGPVPEDQRNGF--IIGYKVFYELKGFPTTEMFEDFPGNTTFSGTITKLNGYTDYEFRVMAYTKVGGLLKSPPVTRKTFEGKP-GKPTNVRFIDVNYQYVQLEWD--PPLNPNGRLSRYRVNYRQKGSSGDWTQVPVSTFNPRSARVNGMVFNRVYEFKIEATNSIGWGEPAIEEVLVTTERSVAQSPVILAIPSTSIRHTSVIVEWRARFDGNAPIRGYNLQFNKDLTGWQNYKHGIPPVENIGRDINKLEVLYLKPGMKYQFRVRAINDLGYSDWSESSRSVRTIQNEQKGAPRNVRVTKKTPTTLTIAWERPEELDLSSPIAGYRIQYQWL-----QSIASPLLVNTDDQTFEYTLKGLKVFSLYEVSVVVFTQLG-AGTQTQPYKWRTGESKPTAEPTNVDVVMQGKSSVRVTWKPPDEESVRGYIRGYKIESRLI--AAGSRRKRRDTSPNSKLQTYIRSHHRSRRALNPTCTAFPKVSEHLAGPYSTFATLKNLKKYTRYDITVRVYXI 5403
W +D +SE S + L+ D G Y+ V N + L Q E Q+ G ++ S GR I + + P + W +E K + R+ IT N L E NG K P LS A+ + + P PG SS TL C+ + P +++TW RNG+ +T HS + N + D G + C A F + +A + P Y+ I + T I C+ +G P P + W ++ I QN +Y +G L IQ ++ D G + C ASN + Y V F + + V G + I+ CEV + + + RE + + IP R++++E GGL++ V + D ++C+ + +L A+ L + +R P + K + L A D P +S Y+ K N T P +T + + GS Q + + G+YS E LE S L + + +VL W P +G + + +S L+++ E + GL ++ ++ A NE+G G Y+ ++ + + P APP ++ S + +++V ++ P + NG L + Y +P + Y NI S + + L +Y + V G S V T +G P + +++ S W PP + G QGYK A V + G G + NL+ T Y VL +T GDG ++ + P A L + T + + W +I YQI + Y +N SR LT L + + + L Y + A +G ++ ++ +P + P L+++ +P TL+ R ++ + ++++ + + +++ L + E A L +T Y M+ N G P+S +T + P P +V S +S+ ++W P+P+ Q NG +GY++ Y ++ + + TI +L + +YE ++ A+ VG S V +T E P P NV V+ + L W P + NG + Y++ +R K + V + +SA + G+ +YE ++ A IG G P+ +L T+ PV L P +R TSV + W+ + N I GY + + + H VE +G + + L P Y FR+ A G+ + E++ + T + E+ PR + V + T ++ + D +SPI + +Q + L Q+ +S + + + L+ F+ Y++ + +G + ++ T + P P +V SSV + W+PP +ES+ G ++GY+I R + AGS + + L + + S + +N + T ST L +LKKY RY++ + Y I
Sbjct: 138 WMRD-----DSELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALL------QRKSEVQVAYMGSFMDTDQRKTVSQGRAA----------ILNLLPITSYPRPQVTWFREG---------------HKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLSI----ARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLHSFGRRLTISNPTSA-------DTGPYVCEAALPGSAF------EPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN--EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIP----RFMLLESGGLQIAPVFIQDAG-NYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLHCGATHD---PRVSLRYVWKKDNVALT----------PSSTSRIVVEKDGSLLISQTWSGD---IGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPF----DGNSPILYYIVELSENNSPWKVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGE-------YQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHIT-NLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTQE-DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEV---YGRNDSR--------LTHTLNSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTISSGVPPDLPGA-PSNLVISNISPRSATLQF------RPGYDGKTSISRWIVEGQVGAIGD--EEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE--VRLTSVRIVWQPPEEPNGIILGYQIAYRLA----SSSPHTFTTVE-VGATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEAT-VITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSI----SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQS-SFKTVNSSST-------------STMCELTHLKKYRRYEVIMTAYNI 1682 HSP 5 Score: 125.946 bits (315), Expect = 2.490e-28 Identity = 199/838 (23.75%), Postives = 329/838 (39.26%), Query Frame = 1
Query: 2044 SLDLIW----DAPDDGGSPIISYLLKM-KNYTQTMYYKLADIDAPQTTYTVNNLQAGSKYRFQVAAKNKFGYGEYSAEATVWLETKTTAPSGPPLEFRSVDADTDYIVLRWEPPLPEKRNGQLDGYIFRYRVVTTS----SYVTRKLNSLDTEYKMDGLPLFTKFEVQIAASNEIGIGPYTDSVFIETLQGKPVAPPTDVKVSIVNSTTVLVSFKSPRQALWNGK-LTRIVALYWPPDVPEDQQTYETNYDTSNIHSQQFYLPRLEADKEYVLAVQVKTTGG-PSPGSEKVQFKTTEGRPDSVRDLTVLKTYSDAFSV--TWKPPLKPGGTLQGYKCEYR-IASGKWVEVKEIIKGTEIGVVVKNLEPLTKYEVRVLAYTNAGDG--SWEVRSATTIEKPELP-HAPSSLKAYNVWGTVIALGWTP-----------GYSGRAVILQYQIQYNNDTDYHQNPSRALWREMKNLTKI-------LENPANLTYLQPNAVYRFRMRAYNRLGASGWSNISVDISTGEGVPSSKPRGLIVTAPARQTLEIKWIPPPRDTWNSDSVKYQFLIHPKAQDLKKISRDQYHVLTDNEATSYAASGLQRFTMYNVTMRLFNNKGYGPWSKHIFFRTSEDYPSGYPMNVRADVQSASSVLVKWGPVPEDQRNGFIIGYKVFYE----LKGFPTTEMFEDFPGNTTFSGTITKLNGYTDYEFRVMAYTKVGGLLKSPPVTRKTFEGKPGKPTNVRFIDVNYQYVQLEWDPPLNPNGRLSRYRVNYRQKGSSGDWTQVPVSTFNPRSARVNGMVFNRV-----YEFKIEATNSIGWGEPAIEEVLVTTE 4425
SL L W D+ +G + Y +K ++ Q+ D + +T+ L+ +Y Q+ A N G G +S V T+ + PS P + + I+L W + +NG + GY +R S++ R ++ + GL F +E+Q+ A IG G + + +E + PP + V T+V + ++ P + NG L +A P T E +QF L + Y+ + KT G P V RP R+L V + A S+ W P ++ + + R + G+W I VV L P T Y++R+ A + GD S E + TT++ ++P P S+ A + + + W P GY L+Y+ + +NP AL E+ + LT+L+ Y M AYN +G S ++ V++ GE P+ P+ + VT LE+ W PPP ++ N + Y+ + + +A + + + L + L T Y V++ FN G GP S RT + P G P + +++++ V WG NG + GY+V YE ++G E GN + L Y FRV A T G +T EG PG P +V + + + L+W + + + Y + R G W PRSA + +++ YEF++ A N G+GEP+ V+ +
Sbjct: 1189 SLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE--VVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSA--LLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEP--NGIILGYQIAYRLASSSPHTFTTVEVGATV-----RQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQ--DVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPI-ALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESP-ASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYK-IYYWEADSQNETEKMKVLFLPE---PVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAP-GAPSFLAFSEITSTTLNVSWGE--PAAANGILQGYRVVYEPLAPVQGVSKVVTVE-VRGNWQRWLKVRDLTKGVTYFFRVQARTITYGPELQANITAGPAEGSPGSPRDV-LVTKSASELTLQWTEGHSGDTPTTGYVIEAR-PSDEGLWDMFVKDI--PRSATSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQ 1999 HSP 6 Score: 88.1965 bits (217), Expect = 7.626e-17 Identity = 89/316 (28.16%), Postives = 148/316 (46.84%), Query Frame = 2
Query: 5402 LKNLKKYTRYDITVRVYNSYADGPKSNPPVGFVTPEDVPGPPYILSDRQYTD-LIDVDFAEPCEPNGQIYGYRAKYQEFG--QKFSDPIDYPAS---QRRIRITGLVQTTRYILELTARTASGFGQKATIEFYTKGAPVRPDSPGAPE--IHDNKPGFLILQWDEGANGHAPVNNFELQYRKGSKGGLVPFRDIKATDI-RYDGSIVVSIPFSLKSDDVYRFRVRSTTKMGTSPWSDWSKPIKPVSAVASS--KPMYEEIWXXXXXXXXXXXXXXXXXXCCWRCQRGKDGYKPKKNGYQMSSFEMAMVNNEGGRGA 6316
LKNL +T+Y +++ +N+ DGPKS+P G T + PG P L+ + T ++V + EP NG + GYR Y+ Q S + QR +++ L + Y + ART + +G + ++ P SPG+P + L LQW EG +G P + ++ R +G D+ DI R S +S+ L+ Y FRV + + G + +P P +AV++ P YEE WF+ V+ + LI+I++++ + K YK G +S+ E ++ + GG A
Sbjct: 1765 LKNLTSHTKYLVSISAFNAAGDGPKSDPQQGR-THQAAPGAPSFLAFSEITSTTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQARTIT-YGPE--LQANITAGPAE-GSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEG----LWDMFVKDIPRSATSYTLSLD-KLRQGVTYEFRVVAVNEAG------YGEPSNPSTAVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALVLHGQNKK-YKNCSTGKGISTMEESVTLDNGGFAA 2063 The following BLAST results are available for this feature:
BLAST of TCONS_00062617 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2024, MARIMBA.