TCONS_00062548 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062548
Unique NameTCONS_00062548
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1467

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062548 ID=TCONS_00062548|Name=TCONS_00062548|organism=Clytia hemisphaerica|type=transcript|length=1467bp
CTGAAAGTGTTTATGAGCATAGTGTAAATGTGAGGAAGGAAATGGGTTCG
AGAGTATCTTCCAGACGACTTGAGATGTTACGTTCAAGACACAAGTGGTG
AAAATGTGATGAAGATTTATCAAGATATGTTGATGAGAACAACCCAGAGG
AATAAAGAAGGATGTATTGTCGACCTTGTCAAGAAACTCACTTCCGAACT
ATTGGATACACACTTTGAAAGTTACGTCACACTAAACAGGGAGCATTATC
ATAACTGCAAGcaactaaaaaaattgaatccAGCTTGGGAATTCGAATTT
GCTTTACCATTATCATTATACTCACATGTGGTGCCAGTGATCGAAAGTCT
TGATGGAGTTGTGTCAGTGGCAAATCAAACATCGTATGGTAATTTTGAGG
TATCTGTCAACTCTTGTGCCGAGAATGGAGAAACGTTAAACGAATTTTTC
ACAGTGGATCTTGGGAATTCTTTAAAACTCCCATCATGCACTTGTGCAAA
ATGGAGAATGAGCTGTTTACCTTGTAGCCACATGCTAACCGTCTTCAAGA
ACTTTCCCCTTACGAAGTATGACGCTTTGAGCCCACTGTATCGCTCAAGC
CCTATTTTTGCGTTCGATTATTCATGCTTTGGAAATGAATTTTACGTCAA
GCCTGTCTCCGTTTCAACTCAAACAACATCAACCATAAGTACTCAAGTTT
CAAATAAAGTGCAGGCTAGACCGGCTAAAATACCTTTGAGCATTACTGTC
AAGAATTCAAAAGAGAAAGTCAAAAGGGTTGTAAAAACAGACAAAGTTGT
AAAAATCGTCGAACAAATTCCAACCCATTCACCACAGAAGAGAAAGAGCC
TTTTAGTCGCAAGTGAAATTCCTCTTGTCAAAGTCAAAGTGAAATCCATA
AAAGACATTCTAACAGAAATGCCGAAAGAAACTATTGAACAATTCAAACG
ATCTCTTCGGAATCGCTCTACTAAGGATAACCAAGATGAGGTAAGGAACG
AGGAAAGCCTAGTAGACCAGTCTAACGAACTACCTGAAAGTAGTACGACA
GATGAGATACAGTACGCAGTCAATAAAAACACCATATTGCAGATTGAAGA
GTTGATTTTACCTAGAGAGGAAACGATTAGTGGTGAAGAATCGTCGAACG
AAAATAACGATGAGACTCAAACGATGAAAGAGCCTCAGTTGAAACTTATG
ATGAAATTGTTAGAAGATCATCAGAGTATTTCTGAACCGATAGCGGAGGA
CAACGATACAGACACTGGGGTGGAAGATCATGCTGAGTTATCGATAGCGA
CTAAAAGGAAATGTAACGATCCTTATGGAGATGGTAAATCTGATGCTTCT
TTAACTTCTAAGAAAATGAAGGGAAAATgatgtgatttgaaagattGGGA
GTTTTACTGGATTTATATTAGAAATTGTTTTTCTAAAGCTGAAGATGATA
GCTCTTTTCAACGTCTG
Run BLAST on NCBI

transcript from alignment at scaffold_369:57592..73049+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062548 ID=TCONS_00062548|Name=TCONS_00062548|organism=Clytia hemisphaerica|type=transcript|length=15458bp|location=Sequence derived from alignment at scaffold_369:57592..73049+ (Clytia hemisphaerica)
CTGAAAGTGTTTATGAGCATAGTGTAAATGTGAGGAAGGGTGGGAAAAAG
TTGCTTTTTTCTGCTGCgaggctttttaaacttttttgcaaggtattttt
taatattatcaGCACGTGCGAATAAGACCTTCAAACTTTTTCTAAGTGAT
GttagattttatttcatttgatttttcgaACTTATCGAATCTGATACTCC
AATATTATCTGCAATATTATCCTGGTATCTTTTATGGAAATATAATCAAA
GCGATAAACTTGAGAAGGAACTAAATCTCTTTTCTGTTGCACAAACGGaa
gtttttaaagttttacGCAACGTGTTCAAATATTACCAGCTCACGTGGGA
AAGACCATACTTCAGCTATAACACTAATAGCAGACAGACTAATTTTTTCA
CAGCGATAGAAACGAGAGTCAGCATCAACATTAAAAAGGTTTTATATCTA
AGagaactttttacaatgattttCATTTGGGATAAGCATATACTGACAAA
TAATGAAGATACATTCATGTCCAGTACTATGACATTTATCCTCTGGCAGC
CAGCTGCACAGTTCGTAAACATCTCTCTTCCTTTTATCTCCATAATATGA
AGCCGTCAATCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGTTATATTTGGCGTGGTTTCTGTCATCACATGTA
AAAAATCCACGTTGGAAAAAACGAATTTACCAACTTGACTGGTTATTCAA
AAACGAATTTTTTCATGGCGATAAATGGTTACTTCGATATTTACGAAACA
AAATACTTATATATGAACGGTAATAAACGAATAAAAAGCTAGACTGTGAT
GGTAGTATTTCTAATGAGGAGTGTGCTGGTCCTACATTCATGTCATGCTG
CCATATTTGGCCCCATATTTAGTTTGATTTTACTTAACAGACTTaacaaa
gaaattaatttttcggGCCTTTCATTAATTAGTGGATGaattaattaaat
taattgGCTTCTCAATCCGTTGGATGGAtgtgattttttgcttttgctaT
GTGTGATATTTGCgtgttttaattcttttgtttcttttaagatttttaca
cgtttttataagaactaaataANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATGATCAATTATAACAATTGAAAT
TTAACAAGATGACAgcgtaaaaaaatattctttgaagTCCCCGTTCTAAT
TTCCCAATTATTACACCAATAATATAATgatgaatgaaataaaattttca
acggCTGAAACCCTGAAACTTAAAACGTcgtcattttaaattcaattgaa
aatgaaaaaaaacatctcCAGGTAATCGATCGTTAAGACACATATCAATA
ACTTAAAATCTTGACCGGATAGGTAAATTTACGGACAGTAAGAACGAAAA
GGTTAAATCATTATAGAGCCAAATTTTTGGGAATGTTCACAGCCCGTCTA
AATTTTTTGTATCCTGCTCAGCTGCTGCTCACCACGTGTTCCAAGTCAAC
TCGACAAACATAATAATTActaagtgacgtcaaaaaagttaGCAATCTTC
AGAAAGGTGTCAAGATGATAGGAGCAAATCGAAGCAAACAAGTGTAATTG
ACTTCTATTTTCATTGTTACCTATGTTACAAATATCTTAAttgtttcgaa
aaaaatgttaattatGCTTGAGGTAAGAAGCAAATATATAACTTATGTCA
AAACTTCGGAtgataaattacaaaaaacaatgagccttttgtttaaaaat
caaTGCTCGAATttgaatgtaaatttttttaatttttttcccatGAAATT
TGCTgttggctgcacgagcaaaaccgttggacggaatctgccgttggcac
ggatttcgtggggtacatatacctatatacctatatactccatagcacca
cgtgccaaaatagccaggacacgtgtgttatatttctttctttttttttt
cacgaaatttgatgctggctgcacgagcaaaaccgttggacgaaatctgc
cgttggcacggatttcgtgggtacatatacctatatacctatatacccca
tagcactatatgcctatataccccatagcaccacgtgccaaaatagccag
gacacgtgcgttatattttgattttttcattttttcccaccAAATTTgtt
gctggctgcacgagcaaaaccgttggacgaaatctgccgttggcacggat
tttgtggggtacatatacctatatacctatataccccatagcaccacgtg
ccaaaatagccaggacacgtgcgttatattttgtttttttcattttttcc
caccAAATTTgttgctggctgcacgagcaaaaaaGTTGAACggaatctgc
cgttggcacggatttcgtggggtacatatacctatatacctatataaccc
atagcaccacgtgccaaaatagccaggacacgtgtgttatgtttcgttct
ttttttttcaacgaaatttgATGCTGGCtacacgagcaaaaccgttggac
gaaatctgccgttggcacggatttcgtgggtacatatacctatataccta
tataccccatagcactatatgcctatataccccatagcaccacgtgccaa
aatagccaggccatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNtttttcattttttcccacgaaatttgctgctgg
ctgcacgagcaaaactgttggacgaaatctgccgttggcacggatttcgt
ggggtacatatacctatatatctatacaccccatagcaccacgtgccaaa
atggccaggccacgtgtgttatatttcgcttttttttttcaacgaaattt
gctgctggctgcacaagcaaaaccgttggatgaaatctgccgttggcacg
gatttcgtggagtacatatacctatatacctatataccccgtagcaccac
gtgccaaaatagtcaggacacgtgtgttatatttcgttctttttttttac
gaaatttgctgctggctgcacgagaaaaaccgttggacggaatctgccgt
tggcacggatttcgtggggtacatatacctatataccccatagcaccacg
tgccaaaatagccaggccccgtgtgttatatttcgttcttctttttttcc
atgaaatttgctgctggctgcacgagcaaaaccgttggacgaaatctgcc
gttggcacggatttcgtggggtacatatccCTATATCCCCCATAGcccca
cgtgccaaaatagccaggccccgtgtgttatatttcgttcttcttttttt
ccatgaaatttgctgctggctgcacgagcaaaaccgttggacgaaatctg
ccgttggcacggatttcgtggggtacatatccCTATATCCCCCATAGccc
cacgtgccaaaatagccaggccccgtgtgttatatttcgttcttcttttt
ttccatgaaatttgctgctggctgcacgagcaaaaccgttggacgaaatc
tgccgttggcacggatttcgtggggtacatatccCTATATCCCCCATAGc
cccacgtgccaaaatagccaggccccgtgtgttatatttcgttcttcttt
ttttccatgaaatttgctgctggctgcacgagcaaaaccgttggacgaaa
tctgccgttggcacggatttcgtggggtacatatccCTATATCCCCCATA
Gccccacgtgccaaaatagccaggccccgtgtgttatatttcgttcttct
ttttttccatgaaatttgctgctggctgcacgagcaaaaccgttggacga
aatctgccgttggcacggatttcgtggggtacatatccCTATATCCCCCA
TAGccccacgtgccaaaatagccaggccccgtgtgttatatttcgttctt
ctttttttccatgaaatttgctgctggctgcacgagcaaaaccgttggac
gaaatctgccgttggcacggatttcgtggggtacatatccCTATATCCCC
CATAGccccacgtgccaaaatagccaggccccgtgtgttatatttcgttc
ttctttttttccatgaaatttgctgctggctgcacgagcaaaaccgttgg
acgaaatctgccgttggcacggatttcgtggggtacatatccCTATATCC
CCCATAGccccacgtgccaaaatagccaggccccgtgtgttatatttcgt
tcttctttttttccatgaaatttgctgctggctgcacgagcaaaaccgtt
ggacgaaatctgccgttggcacggatttcgtggggtacatatccCTATAT
CCCCCATAGccccacgtgccaaaatagccaggccccgtgtgttatatttc
gttcttctttttttccatgaaatttgctgctggctgcacgagcaaaaccg
ttggacgaaatctgccgttggcacggatttcgtggggtacatatccCTAT
ATCCCCCATAGccccacgtgccaaaatagccaggccccgtgtgttatatt
tcgttcttctttttttccatgaaatttgctgctggctgcacgagcaaaac
cgttggacgaaatctgccgttggcacggatttcgtggggtacatatccCT
ATATCCCCCATAGccccacgtgccaaaatagccaggccccgtgtgttata
tttcgttcttctttttttccatgaaatttgctgctggctgcacgagcaaa
accgttggacgaaatctgccgttggcacggatttcgtggggtacatatcc
CTATATCCCCCATAGccccacgtgccaaaatagccaggccccgtgtgtta
tatttcgttcttctttttttccatgaaatttgctgctggctgcacgagca
aaaccgttggacgaaatctgccgttggcacggatttcgtggggtacatat
ccCTATATCCCCCATAGccccacgtgccaaaatagccaggccccgtgtgt
tatatttcgttcttctttttttccatgaaatttgctgctggctgcacgag
caaaaccgttggacgaaatctgccgttggcacggatttcgtggggtacat
atccCTATATCCCCCATAGccccacgtgccaaaatagccaggccccgtgt
gttatatttcgttcttctttttttccatgaaatttgctgctggctgcacg
agcaaaaccgttggacgaaatctgccgttggcacggatttcgtggggtac
atatccCTATATCCCCCATAGccccacgtgccaaaatagccaggccccgt
gtgttatatttcgttcttctttttttccatgaaatttgctgctggctgca
cgagcaaaaccgttggacgaaatctgccgttggcacggatttcgtggggt
acatatccCTATATCCCCCATAGccccacgtgccaaaatagccaggcccc
gtgtgttatatttcgttcttctttttttccatgaaatttgctgctggctg
cacgagcaaaaccgttggacgaaatctgccgttggcacggatttcgtggg
gtacatatccCTATATCCCCCATAGccccacgtgccaaaatagccaggcc
ccgtgtgttatatttcgttcttctttttttccatgaaatttgctgctggc
tgcacgagcaaaaccgttggacgaaatctgccgttggcacggatttcgtg
gggtacatatacctatatacctatacaccccattgcaccacgtgccaaaa
tagccaggccatgTGTGCTATATTTCGGtcttttttttccacgaaatttg
ctgctggctgcacgagcaaaactgttggacgaaatctgccgttggcacgg
atttcgtggggtacatatacctatatacctatataccccgtagcaccacg
tgccaaaatagccaggacacgtgtgttatgtttcgttctttttttttcac
gaaatttgatGCTGGCtacacgagcaaaaccgttggacgaaatctgccgt
tggcacggatttcgtgggtacatatacctatatacctatacaccccattg
caccacgtgccaaaatagccaggccatgTGTGTTATGTTTCGGTCNacac
gagcaaaaccgttggacgaaatctgccgttggcacggatttcgtgggtac
atatacctatatacctatataccccatagcactatatgtctatatacccc
atagcaccacgtgccaaaatagccaggccacgtgtgttatatttcgNagc
accacgtgccaaaatagccaggccacgtgtgttatatttcgctctttttt
ttccacgaaatttgctgctggctgcacgagcaaaactgttggacgaaata
tgccgttggcacggatttcgtggggtacatatacctatatacctatatac
cccgtAGCACCACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNacggatttcgtggggtacatatacct
atataccccatagcactatatgcctatataccccatagcaccacgtgcca
aaatagccaggccatgtgtgttatatttcgttctttttttcacgaaattt
gctgctggctgcacgagcaaaaccgttggacggaatatgccgttggcacg
gatttcgtggggtacatatacctatatacctatataccccgtAGCACCAC
GTgtcaaaatagccaggccacgtgtgttatatttcgttcttttttttttc
catgaaatttgctgctggctgcatgagcaaaaccgttggatggaatctgc
cgttggcacggatttcgtggggtacatatacctatatgccccatagcacc
acgtgccaaaatagccaggacacgtgcgttatatttcgttcttttttttc
acgaaatttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgcc
gttggcccggatttcgtggggtacatatacctatatgccccatagcacca
cgtgccaaaatagccaggacacgtgcgttatatttcgttcttttttttca
cgaaatttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccg
ttggcccggatttcgtggggtacatatacctatatgccccatagcaccac
gtgccaaaatagccaggacacgtgcgttatatttcgttcttttttttcac
gaaatttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgt
tggcccggatttcgtggggtacatatacctatatgccccatagcaccacg
tgccaaaatagccaggacacgtgcgttatatttcgttcttttttttcacg
aaatttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgtt
ggcccggatttcgtggggtacatatacctatatgccccatagcaccacgt
gccaaaatagccaggacacgtgcgttatatttcgttcttttttttcacga
aatttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgttg
gcccggatttcgtggggtacatatacctatatgccccatagcaccacgtg
ccaaaatagccaggacacgtgcgttatatttcgttcttttttttcacgaa
atttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgttgg
cccggatttcgtggggtacatatacctatatgccccatagcaccacgtgc
caaaatagccaggacacgtgcgttatatttcgttcttttttttcacgaaa
tttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgttggc
ccggatttcgtggggtacatatacctatatgccccatagcaccacgtgcc
aaaatagccaggacacgtgcgttatatttcgttcttttttttcacgaaat
ttgatGCTGGCTACACGAGCAAagccgttggacgaaatctgccgttggcc
cggatttcgtggggtacatatacctatatgccccatagcaccacgtgcca
aaatagccaggacacgtgcgttatatttcgttctttttttttccatgaaa
tttgctgctggctgcacgaacaaaactgttggacgaaatctgccgctggc
acggatttcgtgggggacatatacctatatacctatacaccccattgcac
cacgtgccaaaatagccaggccatgtgtgttatatttcggtctttttttt
ccacgaaatttgctgcttgCTGCAcaagcaaaactgttggacgaaatctg
ccggtggcacggatttcgtggggtacatatacctgtatacctatataccc
catagcaccacgtgccaaaatagccagaccacgtgtgttatatttcgttc
tttttttttcatgaaatttgctgttggctgcacgagcaaaacggAATAAA
CTCTTGTATAGTgatcattccgacattttaaatcttccgggggttttgtt
gtttggaattgcttaggtaatggttgctagtaacggcttgtcactgtgcc
ggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatactcggcgcctt
gggccccgcagggttgctagtaacggctcgaatttcagtcaggttaaaaa
aggggcaattttgcccatattataataacattacccgcgtcttttttgtc
attctataagtatttccaaatttttgatttgatgtgccagtgtggctcaa
cggatagcgcgctgggatTCTGATCAGAAACGTGTGTTATATTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTGCCAtaatttatctttgtgagtgttTATCGAGAATT
TGTCGTTTTTCCGAGAATTTTACCGAGAACGACTTTCAACTTCGTTATTA
ACGTTATATTAACATTGCCATTTATAAAATTGCATTTCAAAACTAAGTCT
GAGATCACATTATGGAGATAACTTGTGCGGGATACTGCCGCTGGCTGCCA
GCTGTAATATGTCATAGTACTGGACATAACTCTGAAGATAGCAATGTGGA
GATGGATTTCTCGCAATTCACTGTCTCTGTCCagtcagtagacaagaatt
cacttccagcTCTACCAAGAGGCAATTGAGTCCTCGGGTTCcacatggac
ccgtagctcaatggtagagcaaatgcccgcgaatggcatggttgtgagtt
cgagtctcgccaGACACGTTGGTTTTCCAACAGTTCTTGaggctggtcag
aagacaacatggAGAGCGACTGTACTCACTTCAATGAAGATAATTGTATC
GACACCATAGTACCTCATGTATAACGTAGCGTTGTGCGGTGAATTTTGAA
ATCTCCGTAGATATTGGGTCTGCTTACAGCCAATATCAACACCTATATTT
TATTTTACCAGAAATGGGTTCGAGAGTATCTTCCAGACGACTTGAGATGT
TACGTTCAAGACACAAGTGGTGAAAATGTGATGAAGATTTATCAAGATAT
GTTGATGAGAACAACCCAGAGGAATAAAGAAGGATGTATTGTCGACCTTG
TCAAGAAACTCACTTCCGAACTATTGGATACACACTTTGAAAGGTTTGTA
Aagaccggtctccacttgcgcgcgcttcgatggcactttttcgagcaaag
cttccacccCATTGGCCAGAAGAataatgaagcaactccattggcgcggt
tgaaaaaagttgaaatgtgttcaacttttctttcgagcgcgcgctacatt
tttatgatgtaatcttctttcaaagcaaaaagaagtgaagccaaaaggtg
cagAGGCAGCGTGCGCAagagtggagaccggccttaagattGAAATTTTA
ACCAGATGTCTAGgttgctggcatccactaacggattcctCCGCCTTACG
TAGAGATCTGCAAATCAGACTACCAGTGGTCGTTTGTTTGGGTTCTATTG
TTGTGAGCTTTTGATGTTCAAATGGAATTCGAACGTTTACCCTTAAAACT
TTCAATAAATTATTATAATGTAGAAGAATCTTTTTCACACATTCTTGAAA
CTAAGATTTGGTCCGTACCTTTCTCCTTGAAAACACATTTTAGTAGGTAA
GAATTTTTGCGTTGATATTATAATTTCCTTGCCTTTACTATCCCTGTGCC
ACACAGAGCTTTTCACagtgaaaaaaagtttggtAATAATGATTTGGTTT
GGTTTATTCATCCCTGATTGATACACcagattaaaaaaaagccaGCTCCC
AAAGTCTTTAAATCAAGCTCGGAGAAAGAATGCTCAATGTTTCACTGGTT
ACCATGCTTGCTATAACTTAtaacaaatggaatgaaaaaaaaatattgta
aattgagcagattttttttatttgttgcaAAAGTTAATGAAAATATACAT
TCCTAACCATTTATGGAGGGCAATCCCTCCTAAATATCCCTACCCTCCTT
CTACTTTCCTTTCTTATGAAAAGGTTCGCACTATACTGATATATTAATTT
CTCATATTTTAGTTACGTCACACTAAACAGGGAGCATTATCATAACTGCA
AGcaactaaaaaaattgaatccAGCTTGGGAATTCGAATTTGCTTTACCA
TTATCATTATACTCACATGTGGTGCCAGTGATCGAAAGTCTTGATGGAGT
TGTGTCAGTGGCAAATCAAACATCGTATGGTAATTTTGAGGTATCTGTCA
ACTCTTGTGCCGAGAATGGAGAAACGTTAAACGAATTTTTCACAGTGGAT
CTTGGGAATTCTTTAAAACTCCCATCATGCACTTGTGCAAAATGGAGAAT
GAGCTGTTTACCTTGTAGCCACATGCTAACCGTCTTCAAGAACTTTCCCC
TTACGAAGTATGACGCTTTGAGCCCACTGTATCGCTCAAGCCCTATTTTT
GCGTTCGATTATTCATGCTTTGGAAATGAATTTTACGTCAAGCCTGTCTC
CGTTTCAACTCAAACAACATCAACCATAAGTACTCAAGTTTCAAATAAAG
TGCAGGCTAGACCGGCTAAAATACCTTTGAGCATTACTGTCAAGAATTCA
AAAGAGAAAGTCAAAAGGGTTGTAAAAACAGACAAAGTTGTAAAAATCGT
CGAACAAATTCCAACCCATTCACCACAGAAGAGAAAGAGCCTTTTAGTCG
CAAGTGAAATTCCTCTTGTCAAAGTCAAAGTGAAATCCATAAAAGACATT
CTAACAGAAATGCCGAAAGAAACTATTGAACAATTCAAACGATCTCTTCG
GAATCGCTCTACTAAGGATAACCAAGATGAGGTAAGGAACGAGGAAAGCC
TAGTAGACCAGTCTAACGAACTACCTGAAAGTAGTACGACAGATGAGATA
CAGTACGCAGTCAATAAAAACACCATATTGCAGATTGAAGAGTTGATTTT
ACCTAGAGAGGAAACGATTAGTGGTGAAGAATCGTCGAACGAAAATAACG
ATGAGACTCAAACGATGAAAGAGCCTCAGTTGAAACTTATGATGAAATTG
TTAGAAGATCATCAGAGTATTTCTGAACCGATAGCGGAGGACAACGATAC
AGACACTGGGGTGGAAGATCATGCTGAGTTATCGATAGCGACTAAAAGGA
AATGTAACGATCCTTATGGAGATGGTAAATCTGATGCTTCTTTAACTTCT
AAGAAAATGAAGGGAAAATgatgtgatttgaaagattGGGAGTTTTACTG
GATTTATATTAGAAATTGTTTTTCTAAAGCTGAAGATGATAGCTCTTTTC
AACGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039187XLOC_039187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062548-exon-scaffold_369-1491911889:57592..57630TCONS_00062548-exon-scaffold_369-1491911889:57592..57630Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1510915933:57592..57630TCONS_00062548-exon-scaffold_369-1510915933:57592..57630Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1575043694:57592..57630TCONS_00062548-exon-scaffold_369-1575043694:57592..57630Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1491911889:70703..70884TCONS_00062548-exon-scaffold_369-1491911889:70703..70884Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1510915933:70703..70884TCONS_00062548-exon-scaffold_369-1510915933:70703..70884Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1575043694:70703..70884TCONS_00062548-exon-scaffold_369-1575043694:70703..70884Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1491911889:71804..73049TCONS_00062548-exon-scaffold_369-1491911889:71804..73049Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1510915933:71804..73049TCONS_00062548-exon-scaffold_369-1510915933:71804..73049Clytia hemisphaericaexon
TCONS_00062548-exon-scaffold_369-1575043694:71804..73049TCONS_00062548-exon-scaffold_369-1575043694:71804..73049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:57592..73049 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.88365e-05	9.78867e-05	5.09704e-07	2.19303e-06	0.000353365	0	0.00178733	0.000569459	0.776276	0	1.7794	5.90578e-10	1.33079	7.11449	1.77707e-09	2.32441	2.25563	1.76873	3.66898	5.58052	1.41001	0.0365419	2.26027e-05	6.88863e-06	0	5.25791e-07	1.08655e-07	1.01192e-06	1.78063e-06	0.0115907
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062548 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top