TCONS_00062536 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062536
Unique NameTCONS_00062536
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5333

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062536 ID=TCONS_00062536|Name=TCONS_00062536|organism=Clytia hemisphaerica|type=transcript|length=5333bp
TCTACAGTGAAAAACTTTGACTTACgtcttaaaattttatttattttatt
atttttagataatgaaaaaagagagagaaaaaaataaacaagaaaacAAT
CTTTATAATGATTGATGACACCAGGAATGAAATAGACAAGGAATATGATT
TGACATCAAATAAGCATAATGAAGAGTACAATATTGCTGGTACTGCAGAA
TCTCCAACTAAAGGTGTCATGGATGGTGTGTTTGAATCATATGGTAACTC
GCCCATCGAACCTAACATGGATGTCATAAAGAGTATTGAAGAAGATTCAA
GTACAAAcgactttgaaaatgaaattgattttcatATGGCTGATACCAAT
GAAAAGGTCATTGAAAACCTTCTAAACGATTTGGTTGATATAATTGTTGA
AGCTGAGAATCCAAGGTGTAGAAAACAAACAAGTCTGGACAAAGCTCGGA
ATAACAACATATGTACAACGTACCAAAACCCGACTTTGAATAAAGCTCCA
AGATTGTTTATACTTGATGTAAATAAAAATAAGGATGAGAAAGAAGATGT
CTGTGAAGTTGCAATTGCTGATTCTCTTCAAGAAATGTACAGAATGATCG
AAGAATATAATTTGGAAACTGGTCAACGGTATATTCCTTCTCGGAAACGT
TTCAGAAAAGaTTCACCGATAGACTTTTCAGAGCAATTACCCCTCCACTG
GTATAACAAGTTTCCTGTGGGAGTTGCCACGAGTGACCAGATATCTTCAC
GCACAACCTTCAGTGGCCAGCTATCCTCATGGAGAAATGACTTTGAACTG
AACAGGATGCCTTACTTTCATTTTGGACAGTGTCGTTTTNTGGCCAACTA
TCCTCATGGAGAAATGACTTTGAACTGAACAGGATGCCTTACTTTCATTT
TGGACAGTGTCGTTTTATTTGTGAATTTGGAAACAAACAATGTAAAAGAA
TAaatCAACCTAAAGGACCCTTTTGCAATGCTTACGTTTACGtatcaaaa
tttatgtttttcccTGAATTCAAAGGAAAGCAAGACAAGCTGTTTCCAGA
GCGTTACTTTCAAAAGAGGCTAGAGAAAGGTGATGAAAAGCTGAACAAGC
GGACGGTATACGTGATGTCTTTCCCAAAACTATCAAGGCATCTGAACCAC
ATTCATCATCCCGAAGATGAAAGGCACAGTGCCACTATTGACCATCGTAT
CACTATGAAAATGCAGGATTTCAGTTTGAGAGGTATGACGTCAGAAGAAA
TTAGACATGGCGTCGACCGTTACGTCAAAGACGAAATTTTTCATAACAAG
GAACTGCCAGATCCGTCGGATAAACGATATTATCCTCAATACTACGACGT
TGGCGGTACCCGTCGAAGAGTATTCAGTCTTTGTACCATTTCCTTACCAA
ACATCGAGAAATTGGAAAGTCGTTTCAAAGAATTAAGAGAGAAGCAAGGG
GCTGAAGTTTACTTTAAAATTGACGAGCCACCTATGGAGGAACGATTTCG
AAATCGTGTTCAAGATATATGGGCTTGGGAGAATCgcaaaaataaaccaa
aaccTGATGAGGGTGTAGACGTAGAAGAGTTAACTCAACGAATTATAGAA
CAAGATATATTGGAAATACGGAAATTTAATGATGCGAAACCATGGCGACA
ACGAGCTCCTAGACCTTTATGGAACACACCCATTCAAAAAGTCTTTTTCT
TTCACCAAACTCGTCATCAACAATTACTACTCAATCGTTATGGTTCCatg
gtccatttttatgaaatcaAACCACCTGAAAATCTGATCACCTATCGCGC
TCTCATGGTttcattattcttaatttgtgTACGAACGAACGTTGACTATC
AAGTTGTTGGTACGATACTTTGCAATAAATACAACGACCATGTGAAAGTC
TTGACAGAAGCATTGACTGAGTTCAAAGAGATAAATAGTTCTTGGAAACC
CAAACATCTGGTGATTGACCCTACTGAAGCAATGGTTTCAGTTGTCAGAG
AGCTGTTTCCagGTGTCGAGTATGTTTTCAATGGTGAATCTTGTGTCCGA
CAATGGAAAGATTCTTTGAAACCTCATCTATTGAATGGCATCATCAACGA
GGACACGAAAAAGTTGCAAGCAGATTTGAGGGTGATACAACAAAGTTCTT
CAATGGACGAATTTACTGACCGAATAGAAGATTTATCGGAATCAGAAATG
TGGAATAATGAATCATTGCTGGAATTTCGACGATTTTGGTTCGCTCATAC
TGAGaaatgggTAAAATGTTGTTtccctcaaaatttaaattgCCTTCTTG
AAGACGATTGGCTGAGAAAGATCACTCGGAATTATCAAGATCTAGTTTTG
ATGTCTTCTTACAGAAATGTTGCTCCGTTGGAGGGGTTTGAAGGTGGAAT
GGAACGTTTGTTATGTTATTTGACTGGTGATTCggaaaaagaaatttaca
aaAGTTACGTTCAAAAGAATCAAAGCCTGTTCACTGCCGGGCACTGTGTT
CTCAAAAACAGCAAATCTTTAGTACATAACTACAAGCTACCAATCTTCTT
AATGTCACATTGTCATCCAATACTGAGTGCACCTCAACAAGTAGAAACAC
ACATCCAGAAAGTTTCCACTCAAGAGTATACAGTCTTCGAGCTCAAAGAT
AAAATCCTCGATCGTTTTCATGTATCCCTTGGTGACCAATCGATTTTCCC
ATCATGCACTTGCACTGAATGGATCAACAATCCTTTACTCTGTCGACACA
TGTTTCAAGTTTTCAAGATGTATACACTCGATTTTGAATCGATAAGTCCG
TTGTATAAATCGAGTCCTTTTTTCACGATTGATTATCTCTGTATCGATCA
ACAAGTGAGAAGCATCTCTACAGAGACCACGCAATCCTCGAAAGGAACGC
AATCTGAAGAACGGCAAATCGTCAAATACCTACCGCAACCCAtattcaaa
acaatgaaaaatgttAACGATCATAGTATGTCCATAATGGAAGGTTTAAA
TTATTACATTGATAAACTTGCCAACGACTTCATGCACGAAACATTTCGTA
AAGCTTTTAAAGACGGATTGCAAAGCTTAGAAAAGAAGTATTTGAAAAAA
GCCAAACGAGGTTCCACCAAAACGGTTTGTTTACTTCCAGCTGTTCCGGT
GAATGGTACACCAGCTTCGTCAAAAAAACAAGCTCAACAAACTCTAGTTG
TGTCACTAAATCAGGCTGCTTCGACTCAACACGAGACTACCAAAAAAACC
GACCAGGCTCCTTTGATTCAACACGTGCCTGCTTCGATTGACCACGTAAT
TgtaaaatcaaccaatcaaaattcttCTGTTCAACACGTGACTTCTAAAT
CAACCAATCAGGCTCTACCGATTCAAAACTTGACTGCTACAACAGTCAAC
CAGGACCCTTCGATCCGAACCGTGATAataatatcaaccaatcaagaTAC
CTCTAAGCAAGCTACTAAAAAACCTCAATATTCCTCCATACGCTCTTCAA
CTCTCACACGCACCGCAGACAAAATAGCCAGTTTCTCTAAAGTAAAACGA
ACAACTGAAAAACCCTCCTCAACATCAGTCGATTCTCCTGAATTCATGAG
CATCGACCTTCCCGAATTACCGACGTATGTTCTACACCCATCCTCTGATC
AAATGGTCCCGACTGCGAAACCTGCCAAGCAGATGGCTGTGTCTGTCAAA
TACTCCAATCAGCTAAATCCTCCAAAaaattcatccaatcagatcgcttT
GTCTATGGATACATCCATTCAGAGCACTTCTTCCTCGAAAGCCAACAATT
CGATTACTCCAATCTTGCCCACCAAGTCTGTTTCTTCTGTGAGACCGTCC
AATAAGATGAAATCAGTTGCTTCAAACGGCCCGCATCGGCCGATCGATAT
TTCAGCCATATCAGCTATTCCCGGTGTTCCGATAAAAGCACCGATATATC
TTATACCGGTCACATCTGCTTCGGTGCCACAAAATAATACTGCCACATCT
TTTAATAAAAAGCTTCAAAACATTGTCGAATGCTTTAAcgagaaaatcaa
aaacaagacAATTTTGCCTAGTAATGGGTCTACCAATATAGATAACGCGA
CTCTGAAGAATAATACCGATAACGGAGAGCTCCAAAAGCTCTCAAAAACA
CCCTCTGTATCATTAGAAAACAATGTTGTAAAAGAGCATACTAAGCCAAC
CAACCCAGGGCCAACTTATCCAACGCCAGGTGTCAAGTTACAGCAGTCAA
AAGACACTATATATCGTCTTTTACGAAAACAATACGGAGATGCTATCGAT
TTACGAGAATTAAACGAATGCCACTACGATTCGAAAACAATcgataaaat
tacaaaaaatcttCTCGAACGTGACAAAATCGCAAACCCAAAAACCCCCG
AAACTGCATCTCAGCATCAAACAACTCCTGTCCTACCCTCGAATTATACC
ATCGATGTATCAGGCCGTAAACCAAACAAAGTTCCGATCCCTTACCGTAC
TACAACTTCTAAGATAACTTCGCCCCCTGCTTTTCCTTCTCCTCTCTCAA
GACTGAGAAGGTTGGCTCCTAAGCCATCAAGATATATTCAAATGGAAGCT
GCAAACATGAAGAAAACATCAAGAAACACACCCAGAACGAGGTCCAATCT
AAATTCACAGATTTCGGTTTTCCGAAAGAAAACCTCCTTGGACAAGAGGA
AGAATGGTGATGAAACAAACCACCCATTGATTCCtcataatgaaattaaa
accgaaaatttctttgatattgaACGGAGGGACAACCCTTCTCCAAGAAA
ACAACACGACTTAAGTTTACATTCTATTCAGAAAGAAGCATTGGAAAAGA
TTTCAAGTTTGAAACGGTCTTTGGACGAAAGTCTACAGAATGAAATTGTA
TCGTTGGGAAACGGTAACGCAAAGccaaataaaattatgaaaagtaATAC
GGAAACTTCGTGAATATTATATTTGTGATTGATAGATAATATATAGATTA
ATTACTGTCCATTTGAAAGTTCTTCTATTACTCACAGTCNGATTGATAGA
TAATAATAGAATAATTACTTGAATTGTTCTTGAAAGTTCTTCCATTACTC
ACAGTTTGCTTATACTCGCTAGTCGCTTGctattttaagctttttgttaa
aaatcttGTACTTAGCAAATTTTGACCCCCCGTCTTGATAAAATGCTGGG
GAAAGCTAGTAAAAACACACAAGTATTCATTAATTTAGCATTCTTGAGTT
GACATTTTTAGCTGTAAATATTTTAACGTTATACATATCCATATTATGAT
TATGTTTATAGTAGAGCTTATTTATTATTGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_369:14078..23778+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062536 ID=TCONS_00062536|Name=TCONS_00062536|organism=Clytia hemisphaerica|type=transcript|length=9701bp|location=Sequence derived from alignment at scaffold_369:14078..23778+ (Clytia hemisphaerica)
TCTACAGTGAAAAACTTTGACTTACgtcttaaaattttatttattttatt
atttttagataatgaaaaaagagagagaaaaaaataaacaagaaaacAAT
CTTTATAATGATTGATGACACCAGGAATGAAATAGACAAGGAATATGATT
TGACATCAAATAAGCATAATGAAGAGTACAATATTGCTGGTACTGCAGAA
TCTCCAACTAAAGGTGTCATGGATGGTGTGTTTGAATCATATGGTAACTC
GCCCATCGAACCTAACATGGATGTCATAAAGAGTATTGAAGAAGATTCAA
GTACAAAcgactttgaaaatgaaattgattttcatATGGCTGATACCAAT
GAAAAGGTCATTGAAAACCTTCTAAACGATTTGGTTGATATAATTGTTGA
AGCTGAGAATCCAAGGTGTAGAAAACAAACAAGTCTGGACAAAGCTCGGA
ATAACAACATATGTACAACGTACCAAAACCCGACTTTGAATAAAGCTCCA
AGATTGTTTATACTTGATGTAAATAAAAATAAGGATGAGAAAGAAGATGT
CTGTGAAGTTGCAATTGCTGATTCTCTTCAAGAAATGTACAGAATGATCG
AAGAATATAATTTGGAAACTGGTCAACGGTATATTCCTTCTCGGAAACGT
TTCAGAAAAGGTATTATTCCTACTTTAAGGACTTCCTTTAACTTTCGCgg
acagaaactttcgcgtttttggcGGTTTTGATCCTTTTTTGCTAAAgctt
ctgccaggtaagaaattaaaccttaaaaacgcgaaagttttttttcgcga
aaaataaactttcctacactcagttttgcactgtttgctaaatttttacg
tgttttatgattttttttaccaaaaaaggtaaattttatatgaattcgcg
aaagttctatctgtgaaatttcggctaaaaccataattcacgaaacttaa
attcgctaaattttgcgactttttgacttcgcgaaactttctgcccgcga
aacttTTTGCATTATAAGTATTTTTAACAGACTATTTAAACATGAAATTA
TAGCGATTAAAATAAGCTCATAGCAGGCCTCACAACCAACAACTTtctgt
ctttttttatttttggaatgagaatgaaataaagtatttttttattcgtt
ttttttagaTTCACCGATAGACTTTTCAGAGCAATTACCCCTCCACTGGT
ATAACAAGTTTCCTGTGGGAGTTGCCACGAGTGACCAGATATCTTCACGC
ACAACCTTCAGTGGCCAGCTATCCTCATGGAGAAATGACTTTGAACTGAA
CAGGATGCCTTACTTTCATTTTGGACAGTGTCGTTTTNTGGCCAACTATC
CTCATGGAGAAATGACTTTGAACTGAACAGGATGCCTTACTTTCATTTTG
GACAGTGTCGTTTTATTTGTGAATTTGGAAACAAACAATGTAAAAGAATA
aatgtaaacttttttcttctgtttctttcaaaataattcttcaCAGACCA
AAAGAGTTTCTTATTTGAGTCCGTTGTTGTTCTTATtgcttttccaaaat
tttcaaatttatttaatCATTAATCGAAAATGAGCTTGTGAACTTTTGGG
TCATTTTATTTATTCTATATACTTCTATATTCTTATTCAATAAAGCATTT
TTTTATATTACAGCAACCTAAAGGACCCTTTTGCAATGCTTACGTTTACG
tatcaaaatttatgtttttcccTGAATTCAAAGGAAAGGTTAGTTTGGTG
TAGTGTTCCACTTTTTCTAGGTTATGATGATTGCCAATTCAAGCCTGAGA
AAAATTCATGGTATTTTGGGGTCTTCACAATAATTTACAGTTCAAGATTT
ACTAAAGTGCGCAAGTTTGAATTGAAATTGTGAGAAAGCTTTTGAGCAGA
GGAAACAGTTTAAAAGTTTCTCAACAAAAAATTAACCAGTGATCCGTGTG
ATCAATAATGATCTCAAAATCCCAATTTAGAATCTATTCACAACTCTTAT
CATTTCCCGAACATTGAAGTGTTCAGTTCGTTCATTCATTTTGTTTTAGC
AAGACAAGCTGTTTCCAGAGCGTTACTTTCAAAAGAGGCTAGAGAAAGGT
GATGAAAAGCTGAACAAGCGGACGGTATACGTGATGTCTTTCCCAAAACT
ATCAAGGCATCTGAACCACATTCATCATCCCGAAGATGAAAGGGTAAAGC
TATAATATTCTCGTTCAATTGGTGATGTGCACCACTGCAatatcttctga
cattacatcacggactcaatagctgattggttgcaagtgacgtaaaatca
gtcaatacgtcactttcaaccaatcagctgttgggtccgccgaagacatt
gcaatggtgcatatcatgaagagtgtttttttttaatgttttcttttacC
ATTGAATACTAAAGATGGTTTATGAAAAAGTTGTTATACCAAGAATCTTC
TTGCTTGTACAGAGGAAAACCTGAGGAAACTTTAATACANAGATGGTTTA
TGAAAAAGTTGTTATACCAAGAATCTTCTTGCTTGTACAGAGGAAAACCT
GAGGAAACTTTACTACGTTTTGATACTAAAATTAGCAAcctttttaccct
ttttcagattttttttgcagaaaatgttttcatttcaattatttttgaac
ATGCTTAGTGAATACGTTGAAATGAATTCCTACTCTTACACTCTAGCACA
GTGCCACTATTGACCATCGTATCACTATGAAAATGCAGGATTTCAGTTTG
AGAGGTATGACGTCAGAAGAAATTAGACATGGCGTCGACCGTTACGTCAA
AGACGAAATTTTTCATAACAAGGAACTGCCAGATCCGTCGGATAAACGAT
ATTATCCTCAATACTACGACGTTGGCGGTACCCGTCGAAGAGTATTCAGT
CTTTGTACCATTTCCTTACCAAACATCGAGAAATTGGAAAGTCGTTTCAA
AGAATTAAGAGAGAAGCAAGGGGCTGAAGTTTACTTTAAAATTGACGAGC
CACCTATGGAGGAACGATTTCGAAATCGTGTTCAAGATATATGGGCTTGG
GAGAATCgcaaaaataaaccaaaaccTGATGAGGGTGTAGACGTAGAAGA
GTTAACTCAACGAATTATAGAACAAGATATATTGGAAATACGGAAATTTA
ATGATGCGAAACCATGGCGACAACGAGCTCCTAGACCTTTATGGAACACA
CCCATTCAAAAAGTCTTTTTCTTTCACCAAACTCGTCATCAACAATTACT
ACTCAATCGTTATGGTTCCatggtccatttttatgaaatcaAACCACCTG
AAAATCTGATCACCTATCGCGCTCTCATGGTttcattattcttaatttgt
gTACGAACGAACGTTGACTATCAAGTTGTTGGTACGATACTTTGCAATAA
ATACAACGACCATGTGAAAGTCTTGACAGAAGCATTGACTGAGTTCAAAG
AGATAAATAGTTCTTGGAAACCCAAACATCTGGTGATTGACCCTACTGAA
GCAATGGTTTCAGTTGTCAGAGAGCTGTTTCCaggtattattttttcaat
ctcATCTTTCGctaaaattcgatttttgatcGGCAGACAAAATCTTCTCT
TTTATTCTTGATCAGAGCTCGGACGATAAAACAGGAACTGGGTATAACTT
TGATTGCTCCTTCTCAGACTTTGAAATGCTTGAAATGATAATTAAAAACA
ACACTCCGACGAAGGGACCACAAAATCACAAATAGAAAATATCCAAACAG
TCAAAGGGTCTTGATTTCGGCCACCTATCGCCTTACTTAATACTTTTTAA
ACTGCGTACCCAGTGTAAAGAGACATTGAAAAGAAGTTTTGTATTGACAT
ATGATTATGAATAATCACTCAAAAATGAGACAAGACAGAAAATCAGCCGT
CTAAATTAAGGCTAAAGGGTCCCTGAATCGCTAATTTTTTTGTGCCGAAT
TCTCCTTTATGACCTTCTTGGTTACTATAATCGTCATTCGTTTTTCAATT
CAGAAattgaatctttaacctttagGTGTCGAGTATGTTTTCAATGGTGA
ATCTTGTGTCCGACAATGGAAAGATTCTTTGAAACCTCATCTATTGAATG
GCATCATCAACGAGGACACGAAAAAGTTGCAAGCAGATTTGAGGGTGATA
CAACAAAGTTCTTCAATGGACGAATTTACTGACCGAATAGAAGATTTATC
GGAATCAGAAATGTGGAATAATGAATCATTGCTGGAATTTCGACGATTTT
GGTTCGCTCATACTGAGGTACCTTTGATCACCCATTTTCCATGCAATTCC
GCCTATCGATTCATAATATTGAGATTAAAGCATATTAAAGCATCAGATAA
TTCGTGACGGGAATAAGGGTCCCTGCAGCCTCCATTGATAATGCTGCATT
TTTCTACAAGCTAACCGAGACctagtctgtacacagacccgatatctacg
gtgaatttcaaaattcgtcgCCTTAGAGGGTCTGTTGGcattgtcttttc
tgatttaagatttttcaaaccgaccgttGCGATGGAATGCAGAAAAACTG
TACAGAGTAACGGGGACCGGGAAGCAAGACAGTTATAAATATAAGCCCTT
TGTTAATATCCAGCGATGATTTGCTTAAAAATAGTCTTGAGTTTGTTACT
AAGGGTATCCAGGCTGACTTTGTAAGATGAACCAATTTATGTAGAAAGAA
AAGCAATATTCCGAAATTAACGCCATTTAAATCATGTCCGTTATATTGTG
TATGGTTTCAGAAGCCATTTCGCTAGATAATATGGCCTATAAATCATCTA
CGTTCTGTACCGTACAAGTCGGATACATTAGTTCTCTAGTGCAGGTTTTT
CGTTTGGTGGGTATGTGTAGTCGGCTAGAATCAGtagcgttgtgggaaaa
tttttctggaggggccaaagtcaattttttttaaatggcgccccccaATT
TTCTAAACTCTTACTAATTcgtttgcctaggcataatgaggaaagaaata
tttactggtaagagtagatatatctttgatgaatggaaaatggaaaaaca
ggccccaccctggttggggccgactagaaaatttttgaaaatccactgcc
aagataccctaaatcaccaaataaaaatagacaaatttgacacttgctag
ggtgaaaagaaacttaaagaaataATGTGCAATGCAAGCGAAGCGAGCGa
tgatgttttatgatttcaatattgttgtcagcaaattggtattggggcgc
agttagtttttcatttaataatgatTCTATATTgtacataaaaaaaattg
taagttagctagattgcaaagaatTTACCAATaaactttattgcgagcga
agcgagtaattcaaaattatctcagtaagaTTGGTCCTGGGGCGCAATCa
aaggcgcataaagtatgatttttaagattgggacgtttaaaaaatctctt
ttggtgcTCCTTGCTCTTCGgtgccccttcaaaaaagctccgctgggggg
cgGGGCCTCCCCTGTCCCAACGCTACTGGCTAGAATAGTTTGTGTAATCT
CAGTTAAAGATAGTTGACTTGCTAATTCGAAATCGAAAAGGGAACctttt
ttgttcaaattacagagagattcgaattataaaggTTTTAATAAGGGTTT
CCCCTTAAAGGGGACTAaagaataagttcgaattatggaaagattcaaat
aataagAAGTTCAAATAAACAAGAGTCTACCGTCATGTATTTTTATtcca
tttttttagaaatgggTAAAATGTTGTTtccctcaaaatttaaattgCCT
TCTTGAAGACGATTGGCTGAGAAAGATCACTCGGAATTATCAAGATCTAG
TTTTGATGTCTTCTTACAGAAATGTTGCTCCGTTGGAGGGGTTTGAAGGT
GGAATGGAACGTTTGTTATGTTATTTGACTGGTGATTCggaaaaagaaat
ttacaaaAGGTCTGACAAATTTTATGTcttaaaattttagttttagtcAA
AACTCGCTTTTGGTTTTCTCGGAAAGGCCTACAACCACATAAGCTTAGAT
ACACTACAATTgatattttgtgaattttgatatgatttCCATGTCAATTA
TGAAATAAACTTGTAGGCTTGTATATTTATTGGCAAAACATATACACTGG
AAGCGGAGGCTTGAAgtccttttcttcttttctgattgggcttttccaga
aaaaaaacgtataccccctgttgaggaggtccatttccattCCAAGGAGG
TAAGGTTTGCTATGTGGCAGAATTCCATAgagagatacaaaaatctgtca
aaaataactggaattcaatggggaagctttttaaatcctactaaaattct
gaattccagaggggtttaagcctgaaattgcctggaattccagggggttg
cagcatttccagccacgaaatgatggacctcctcaacagggggtatactg
tttttttctggaattttaCTTACAACATTTTTTATAATCATTTCATGTTT
CTCACAACTGCTTTTTTTTCAGTTACGTTCAAAAGAATCAAAGCCTGTTC
ACTGCCGGGCACTGTGTTCTCAAAAACAGCAAATCTTTAGTACATAACTA
CAAGCTACCAATCTTCTTAATGTCACATTGTCATCCAATACTGAGTGCAC
CTCAACAAGTAGAAACACACATCCAGAAAGTTTCCACTCAAGAGTATACA
GTCTTCGAGCTCAAAGATAAAATCCTCGATCGTTTTCATGTATCCCTTGG
TGACCAATCGATTTTCCCATCATGCACTTGCACTGAATGGATCAACAATC
CTTTACTCTGTCGACACATGTTTCAAGTTTTCAAGATGTATACACTCGAT
TTTGAATCGATAAGTCCGTTGTATAAATCGAGTCCTTTTTTCACGATTGA
TTATCTCTGTATCGATCAACAAGTGAGAAGCATCTCTACAGAGACCACGC
AATCCTCGAAAGGAACGCAATCTGAAGAACGGCAAATCGTCAAATACCTA
CCGCAACCCAtattcaaaacaatgaaaaatgttAACGATCATAGTATGTC
CATAATGGAAGGTTTAAATTATTACATTGATAAACTTGCCAACGACTTCA
TGCACGAAACATTTCGTAAAGCTTTTAAAGACGGATTGCAAAGCTTAGAA
AAGAAGTATTTGAAAAAAGCCAAACGAGGTTCCACCAAAACGGTTTGTTT
ACTTCCAGCTGTTCCGGTGAATGGTACACCAGCTTCGTCAAAAAAACAAG
CTCAACAAACTCTAGTTGTGTCACTAAATCAGGCTGCTTCGACTCAACAC
GAGACTACCAAAAAAACCGACCAGGCTCCTTTGATTCAACACGTGCCTGC
TTCGATTGACCACGTAATTgtaaaatcaaccaatcaaaattcttCTGTTC
AACATNCTTCGATTGACCACGTAACTgtcaaatcaaccaatcaaaaccCT
TATGTTCAACACGTGACTGCTAAATCAACCAATCAGGCTCTACCGATTCA
ACACGTGACTGTTTCGAGTGACCACGTAACTGTTAAGTCAACCAATCATG
CTCCTTCGATTCAACACATGAGTGCTAAATCAACCAATCATGCTCCTTTA
ATTAAACACGTGACTGCTCAACTAAACAATCAGACTTCATCGATGGAACA
AGTGGATGAACAAGTTGCTgttcaatcaaccaatcagtcTCATTCAATTC
AACACGTGACTTCTAAATCAACCAATCAGGCTCTACCGATTCAAAACTTG
ACTGCTACAACAGTCAACCAGGACCCTTCGATCCGAACCGTGATAataat
atcaaccaatcaagaTACCTCTAAGCAAGCTACTAAAAAACCTCAATATT
CCTCCATACGCTCTTCAACTCTCACACGCACCGCAGACAAAATAGCCAGT
TTCTCTAAAGTAAAACGAACAACTGAAAAACCCTCCTCAACATCAGTCGA
TTCTCCTGAATTCATGAGCATCGACCTTCCCGAATTACCGACGTATGTTC
TACACCCATCCTCTGATCAAATGGTCCCGACTGCGAAACCTGCCAAGCAG
ATGGCTGTGTCTGTCAAATACTCCAATCAGCTAAATCCTCCAAAaaattc
atccaatcagatcgcttTGTCTATGGATACATCCATTCAGAGCACTTCTT
CCTCGAAAGCCAACAATTCGATTACTCCAATCTTGCCCACCAAGTCTGTT
TCTTCTGTGAGACCGTCCAATAAGATGAAATCAGTTGCTTCAAACGGCCC
GCATCGGCCGATCGATATTTCAGCCATATCAGCTATTCCCGGTGTTCCGA
TAAAAGCACCGATATATCTTATACCGGTCACATCTGCTTCGGTGCCACAA
AATAATACTGCCACATCTTTTAATAAAAAGCTTCAAAACATTGTCGAATG
CTTTAAcgagaaaatcaaaaacaagacAATTTTGCCTAGTAATGGGTCTA
CCAATATAGATAACGCGACTCTGAAGAATAATACCGATAACGGAGAGCTC
CAAAAGCTCTCAAAAACACCCTCTGTATCATTAGAAAACAATGTTGTAAA
AGAGCATACTAAGCCAACCAACCCAGGGCCAACTTATCCAACGCCAGGTG
TCAAGTTACAGCAGTCAAAAGACACTATATATCGTCTTTTACGAAAACAA
TACGGAGATGCTATCGATTTACGAGAATTAAACGAATGCCACTACGATTC
GAAAACAATcgataaaattacaaaaaatcttCTCGAACGTGACAAAATCG
CAAACCCAAAAACCCCCGAAACTGCATCTCAGCATCAAACAACTCCTGTC
CTACCCTCGAATTATACCATCGATGTATCAGGCCGTAAACCAAACAAAGT
TCCGATCCCTTACCGTACTACAACTTCTAAGATAACTTCGCCCCCTGCTT
TTCCTTCTCCTCTCTCAAGACTGAGAAGGTTGGCTCCTAAGCCATCAAGA
TATATTCAAATGGAAGCTGCAAACATGAAGAAAACATCAAGAAACACACC
CAGAACGAGGTCCAATCTAAATTCACAGATTTCGGTTTTCCGAAAGAAAA
CCTCCTTGGACAAGAGGAAGAATGGTGATGAAACAAACCACCCATTGATT
CCtcataatgaaattaaaaccgaaaatttctttgatattgaACGGAGGGA
CAACCCTTCTCCAAGAAAACAACACGACTTAAGTTTACATTCTATTCAGA
AAGAAGCATTGGAAAAGATTTCAAGTTTGAAACGGTCTTTGGACGAAAGT
CTACAGAATGAAATTGTATCGTTGGGAAACGGTAACGCAAAGccaaataa
aattatgaaaagtaATACGGAAACTTCGTGAATATTATATTTGTGATTGA
TAGATAATATATAGATTAATTACTGTCCATTTGAAAGTTCTTCTATTACT
CACAGTCNGATTGATAGATAATAATAGAATAATTACTTGAATTGTTCTTG
AAAGTTCTTCCATTACTCACAGTTTGCTTATACTCGCTAGTCGCTTGcta
ttttaagctttttgttaaaaatcttGTACTTAGCAAATTTTGACCCCCCG
TCTTGATAAAATGCTGGGGAAAGCTAGTAAAAACACACAAGTATTCATTA
ATTTAGCATTCTTGAGTTGACATTTTTAGCTGTAAATATTTTAACGTTAT
ACATATCCATATTATGATTATGTTTATAGTAGAGCTTATTTATTATTGAA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039185XLOC_039185Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062536-exon-scaffold_369-1491911889:14078..14737TCONS_00062536-exon-scaffold_369-1491911889:14078..14737Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:14078..14737TCONS_00062536-exon-scaffold_369-1510915933:14078..14737Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:14078..14737TCONS_00062536-exon-scaffold_369-1575043694:14078..14737Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:15236..15530TCONS_00062536-exon-scaffold_369-1491911889:15236..15530Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:15236..15530TCONS_00062536-exon-scaffold_369-1510915933:15236..15530Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:15236..15530TCONS_00062536-exon-scaffold_369-1575043694:15236..15530Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:15741..15815TCONS_00062536-exon-scaffold_369-1491911889:15741..15815Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:15741..15815TCONS_00062536-exon-scaffold_369-1510915933:15741..15815Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:15741..15815TCONS_00062536-exon-scaffold_369-1575043694:15741..15815Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:16127..16270TCONS_00062536-exon-scaffold_369-1491911889:16127..16270Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:16127..16270TCONS_00062536-exon-scaffold_369-1510915933:16127..16270Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:16127..16270TCONS_00062536-exon-scaffold_369-1575043694:16127..16270Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:16774..17611TCONS_00062536-exon-scaffold_369-1491911889:16774..17611Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:16774..17611TCONS_00062536-exon-scaffold_369-1510915933:16774..17611Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:16774..17611TCONS_00062536-exon-scaffold_369-1575043694:16774..17611Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:18103..18344TCONS_00062536-exon-scaffold_369-1491911889:18103..18344Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:18103..18344TCONS_00062536-exon-scaffold_369-1510915933:18103..18344Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:18103..18344TCONS_00062536-exon-scaffold_369-1575043694:18103..18344Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:19837..20036TCONS_00062536-exon-scaffold_369-1491911889:19837..20036Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:19837..20036TCONS_00062536-exon-scaffold_369-1510915933:19837..20036Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:19837..20036TCONS_00062536-exon-scaffold_369-1575043694:19837..20036Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:20600..21480TCONS_00062536-exon-scaffold_369-1491911889:20600..21480Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:20600..21480TCONS_00062536-exon-scaffold_369-1510915933:20600..21480Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:20600..21480TCONS_00062536-exon-scaffold_369-1575043694:20600..21480Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1491911889:21781..23778TCONS_00062536-exon-scaffold_369-1491911889:21781..23778Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1510915933:21781..23778TCONS_00062536-exon-scaffold_369-1510915933:21781..23778Clytia hemisphaericaexon
TCONS_00062536-exon-scaffold_369-1575043694:21781..23778TCONS_00062536-exon-scaffold_369-1575043694:21781..23778Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:14078..23778 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.90132	0.578562	0.000737202	0.147292	1.10046	0.659073	0.285183	0.33266	0.73457	0.000253944	0.144092	0.298084	0.000381347	0.717856	0.0184946	0.613634	0.191492	0.0584969	0	1.66208e-05	1.04164	0.108996	0.691669	0.00307725	0.552225	2.2777e-05	0.828882	0.541366	0.351926	0.425982
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062536 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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