TCONS_00062513 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062513
Unique NameTCONS_00062513
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2657

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062513 ID=TCONS_00062513|Name=TCONS_00062513|organism=Clytia hemisphaerica|type=transcript|length=2657bp
ttcagcttgaaatagaaataaatgaataaataatctttaaatacaatgaG
ATGAGTGAACAGCGAAGAAAAACATGTCATGGATAACCATCTAGTCAATT
ACAACTATGGTAGTAAATCTAGcttcTGCCCATCATCAAACTTCATCAAC
ACCATCCGTATCCAAGACAACGAAATCAAGCAACAACAGCAACTACCGAG
AAGCATCAAAGGCAAATGGACCAAGTCTGAAGATGAGAAATTGAAGACAT
TGTGTGTCTCTTTGGGCACTGATAACTGGTCGGCCATTGGTAACCATTTC
CCTCAAAGAACTGAAGTACAATGTCAACAACGATGGAGAAAGGTTTTGGA
CCCTAGTCTCATCAAAGGTGCATGGACAAAGGAAGAAGATGACCTTGTAG
TTCAACTGGTCAATCAATATGGTCCAAAGAAATGGTCACTCATTGCTTCA
CACCTTCAAGGACGTATTGGTAAACAATGTCGTGAAAGATGGCATAACCA
TCTGAATCCCAATGTCAACAAACAAGCATGGTCTGAAGAAGAAGATCGAC
TCATCTACGAAGCACATTCCCAAATCGGTAATCGTTGGGCGGACATTGCT
AAATTGTTGCCAGGCCGAACTGATAATGCTATCAAGAATCATTGGAATTC
GACCATGAAACGACGCTTCGAACCCGGTTTTCGTCAACGTACTAAACGTG
AAGAGCGTCGTATTATTGCCGCCGTCGCCGATAAGGAAAACGTCTACCCA
AGATGCACTTCTTCGTCAACTGTCACTGGTCGAGATCAGCTCATTTCGTC
ACAAAGTCTGGTCAGTAAACCCATGCATGATTTACTACCGATATGCGACG
AAGACGGGGGCATCAACATCAAATTGGAACCTGAGGATCACAATAACCAG
TTCAGCGATATCGAACCTGATCCAGACCTGGTCATCACACCGTTGAAAGA
CATTAAAAATTTCTCAGATATTTTAGCAGAGATGGGTGGCGTAGATGGGA
TCTTACAAACATCACAAATGCACCCGTTGGCTGATGACAATAAAGAGAAT
TTCATCCCGTTGATTGAAACGCAACCGCATGAACAACAGAACACCACCAC
TACACAAAACAGGAGTCTCACTTCCATCCCTGGACGCTACAGCATGCCAC
CGAGTATTTTACGTCGATCTAAGAAGTTTCCATTCTTGGATGCTTCCAAC
AATACGTTCAGCAAAGATGAATCCATTGTTTCGTACCAACAACTGGGCTT
CTCACCTTCAGCATTTCTGAACACTTCAAATTCGTATAATGGAGAAACTT
CAAAAGAAATGGTCACTTCGACACCAGCTAAAGGCTTGACGACCACTCCT
ATAACGCCCTCGATTATGATCACACCTCTGGTTGACGAAATTAAATTCAA
TCACGGGAGTAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGCCACCA
GTAGTCTCAAGAAACCTAAGAAATCACTAGTCAGTACAACTCCTCGCACG
CCAACGCCTTTACGAACGAGCAAGAAAGAGCAAGTATGCACGGATACTAA
GCTAGCTACCATtgatgaaatttctaaattgttAATGAAGAAAGCGAATA
CTTCGAGTGGGACAACTCCTGACCATGATTATGCAAAATTAACTGAATTG
AATTCCATAGCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCTAGTAA
GACTTCTTTGAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAACTCGA
TGGTTCGACCGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGAATGCT
ATTGAGCAAATGTCCACTTGTTTCACACCTCAAAAACGAAAAGATAATTT
GACTACAACGACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAAAGTGA
CTTTTCAAGACACATTATCGTCAACTAGTTTtgtcaagaaaaatgataaa
ggaTTCAGTTTCATTTTGAATTCACAACAAATGCCAAAGATGAGCTTATT
TCAACATCCacagcaaaataaacaacaaGTTGCGCAGCGCCTGAAACAAC
TTCCCGGGCGGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAACCAATG
AAAATACCTATTCGCAGGTTACCTCCacgtaatttgaaatttgcagaCGA
TAGTGGACAACGTCAGCAGCTGTTATCACGCCCAAAAACAAACATACGCT
CAACGCCCACCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGACAAAGT
CATGACCAGAAATTTTTGACTGAACAGGCGCGTTTGATTATGAAGGAAAT
TCAACAAGCTAGTCTTATATGACGAATGGTgcttattgttattttttgtt
tatatttaagttttttgttttaagtcttttgttatttttatttaagtttg
ttttaaaatgttgaataaGATTGTTTGGTTATGCCTTGTTAACAATTGTT
TGAAGCAGCGGAGCAAATCTATATATTGACCCCCCCTCTCACATATAAGC
ACacgaattttcgaaaaatagatgTTCTGAGACTGAGAATCTGGCTCgaa
tgaatctgaaaattttgcgaTCTTCTTAACTTGTTTATTTGAGAAATTAA
ATGTGCGGGAAACAATGTTTAGCCTTGATTGTAAACTAAATTAATCCGGT
TGTTCGG
Run BLAST on NCBI

protein sequence of TCONS_00062513-protein

>TCONS_00062513-protein ID=TCONS_00062513-protein|Name=TCONS_00062513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=747bp
MDNHLVNYNYGSKSSFCPSSNFINTIRIQDNEIKQQQQLPRSIKGKWTKS
EDEKLKTLCVSLGTDNWSAIGNHFPQRTEVQCQQRWRKVLDPSLIKGAWT
KEEDDLVVQLVNQYGPKKWSLIASHLQGRIGKQCRERWHNHLNPNVNKQA
WSEEEDRLIYEAHSQIGNRWADIAKLLPGRTDNAIKNHWNSTMKRRFEPG
FRQRTKREERRIIAAVADKENVYPRCTSSSTVTGRDQLISSQSLVSKPMH
DLLPICDEDGGINIKLEPEDHNNQFSDIEPDPDLVITPLKDIKNFSDILA
EMGGVDGILQTSQMHPLADDNKENFIPLIETQPHEQQNTTTTQNRSLTSI
PGRYSMPPSILRRSKKFPFLDASNNTFSKDESIVSYQQLGFSPSAFLNTS
NSYNGETSKEMVTSTPAKGLTTTPITPSIMITPLVDEIKFNHGSSSKKRK
PFFSSATSSLKKPKKSLVSTTPRTPTPLRTSKKEQVCTDTKLATIDEISK
LLMKKANTSSGTTPDHDYAKLTELNSIAVDSSNDFSSGSSKTSLRRTLFD
ETPCQNSMVRPLGVNLFTEKELNAIEQMSTCFTPQKRKDNLTTTTAAESK
EKSQHKVTFQDTLSSTSFVKKNDKGFSFILNSQQMPKMSLFQHPQQNKQQ
VAQRLKQLPGRQEIRILPLVGKPMKIPIRRLPPRNLKFADDSGQRQQLLS
RPKTNIRSTPTQGDAFRAVAFGQSHDQKFLTEQARLIMKEIQQASLI
Run BLAST on NCBI

transcript from alignment at scaffold_367:123638..129584-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062513 ID=TCONS_00062513|Name=TCONS_00062513|organism=Clytia hemisphaerica|type=transcript|length=5947bp|location=Sequence derived from alignment at scaffold_367:123638..129584- (Clytia hemisphaerica)
TTCAGCTTGAAATAGAAATAAATGAATAAATAATCTTTAAATACAATGAG
ATGAGTGAACAGCGAAGAAAAACATGTCATGGATAACCATCTAGTCAATT
ACAACTATGGTAGTAAATCTAGGTAAGGTTTGAAAAATTTCATATGAAAT
ATAAAAGTGTTCATATTTTAACTTATGCTAATGTCAGTGTGGTTAGAAAC
TTGAAGATCATTAAAAAACATTTCACAGGTTGAAGGTGTTTATGATATTT
AAAAATTCAAATCACAGTTTTTTTGGAAATACGTAGCACTGTGGAATTTT
TCATCTCTCGTTTCTAAGCAAAAACTACGTCAGCCTAGCAAAAAACAAGT
AGAAGTGTTAAGTGTTTCTTTCTCTCTACAGAGAATGATTTCGTATAATT
TCAATGTGAGCCTTTTTGGAATCTCACATCTGGCTTTTGTACTTCCCAAA
GGCTGAGCCGTTCCAATACAAAATTTCATAATACCTGATAATACTACTAT
TTTCTGGACATTCCTACATTTCATTCCTAGTGGAAATGAAATTACTCCAA
ACATCTTCAACTGTTACGTATACAGAATATTTTGAATATATGATATATTG
ATACAGGCATTAAAAACATCTTCATTTTTTTCTCCAGCTTCTGCCCATCA
TCAAACTTCATCAACACCATCCGTATCCAAGACAACGAAATCAAGCAACA
ACAGCAACTACCGAGAAGCATCAAAGGCAAATGGACCAAGTCTGAAGATG
AGAAATTGAAGACATTGTGTGTCTCTTTGGGCACTGATAACTGGTCGGCC
ATTGGTAACCATTTCCCTCAAAGAACTGAAGTACAATGTCAACAACGATG
GAGAAAGGTTTGTGGATTTTTAAAACTCTTGCCTAGGGACCTAAGTCGCT
CACTAACTCAGCTAACTGAAGCTTTCTCAATGCAGTCTGAGTAACCATCA
ATTTGGTAGAATATTTTTATCTCCCAATTTCGTTTACCAACTTAAGTAAT
GTTGTGAAAATTAAAGTAATCTTTAGCTCATCATTGTTATAGTTTTGCTC
AATTTTTCACGTTCTTAAAACTATCGCGATCGGATACGTTTCTATCTTTT
AGTAGATTCTATAAAGGATTCTGAACTTTCTACCAAACATACCATCTCAC
CCATCATTAAGTAGATTCCATTTCGCGTCGTCTAAAATTTCGTAACCCTA
GTGATACCAGACCAACATCACCAAAACCACTTACGCAATTCGAAAGCTCT
CAAAAATCGATGTACAATCATGTTCGTAATATTTGAGAAAAAAGGGAAAT
CCTACGGGAAGTTTTGAAACTACAATCGATTTGTAAGTGCTCTAAAGTAG
GTTTGAAGGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGACT
TAGAACCTTAGGATCTGAGGATCCAAAAGTTAAAAAATAGTCCAATAAGG
CTCAGAATATAGCCTGGAAGTCTGCCAACCCCTCCCAAATTGAAATATTC
GATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTAAGTTAAAGAGATAGCCCAAAATCGAC
TTTCTCGCCAGAACTTTAAATCTTGAAAAACGTTAAAATAACTGGAATTC
TCATTCTATTTCGACCATGATTGTAGAAGATTCTCAATCAAGGCTGTTCC
TAACGTAGGAAGGCCATACATTGCTCAAGATAATCGAGTTATTTAGTTTA
TGTATGACCTCGCTTCCAATTCCAGGTTTTGGACCCTAGTCTCATCAAAG
GTGCATGGACAAAGGAAGAAGATGACCTTGTAGTTCAACTGGTCAATCAA
TATGGTCCAAAGAAATGGTCACTCATTGCTTCACACCTTCAAGGACGTAT
TGGTAAACAATGTCGTGAAAGATGGCATAACCATCTGAATCCCAATGTCA
ACAAACAAGCATGGTCTGAAGAAGAAGATCGACTCATCTACGAAGCACAT
TCCCAAATCGGTAATCGTTGGGCGGACATTGCTAAATTGTTGCCAGGCCG
AACTGATAATGCTATCAAGAATCATTGGAATTCGACCATGAAACGACGCT
TCGAACCCGGTTTTCGTCAACGTACTAAACGTGAAGAGCGTCGTATTATT
GCCGCCGTCGCCGATAAGGAAAACGTCTACCCAAGATGCACTTCTTCGTC
AACTGTCACTGGTCGAGATCAGCTCATTTCGTCACAAAGTCTGGTCAGTA
AACCCATGCATGATTTACTACCGATATGCGACGAAGACGGGGGCATCAAC
ATCAAATTGGAACCTGAGGATCACAATAACCAGTTCAGCGATATCGAACC
TGATCCAGACCTGGTCATCACACCGTTGAAAGACATTAAAAATTTCTCAG
ATATTTTAGCAGAGATGGGTGGCGTAGATGGGATCTTACAAACATCACAA
ATGCACCCGTTGGCTGATGACAATAAAGAGAATTTCATCCCGTTGATTGA
AACGCAACCGCATGAACAACAGAACACCACCACTACACAAAACAGGTGAT
TTGAACTTTATTAGATTTATTTATTGTTTTTCCTCTAGTGAAAACAAAAA
AACTATAATCGATAAAGGCAAACCTTTCAAATCTTGAGCTCTCATACCAA
TTCTGATTCTATATATTCCTAGGGAAAAGAGGCTACATAGAATAAGGCCT
TTAGTCTCGTGCTTTTAGACTGATTTGCCAAGTACAAAGTGATGTTTTCT
ATTGTGTGTACTGTTTCACTCTCTGATTTCTTACATTCAATAATATAATT
TGTATGTTATATCTCCTCTTTTCTTCAGGAGTCTCACTTCCATCCCTGGA
CGCTACAGCATGCCACCGAGTATTTTACGTCGATCTAAGAAGTTTCCATT
CTTGGATGCTTCCAACAATACGTTCAGCAAAGATGAATCCATTGTTTCGT
ACCAACAACTGGGCTTCTCACCTTCAGCATTTCTGAACACTTCAAATTCG
TATAATGGAGAAACTTCAAAAGAAATGGTCACTTCGACACCAGCTAAAGG
TTTGATGATGTTTGAGTTTTGTTTAAGTATGCTTTATCTCGTAAGGTACA
CCTCATGACCTAATCACTTGATTTTCTTTTTTTTCTNTTTGTTTAAGTAT
GCTTTATTTCGTAAGGTACACCTCATGACCTAATTATTCGATTTTCTTTT
TTTAATGTTAAATTAATTTTACTGGACGCTTACAATGTGACCGGAAAAGG
CGGAAAAATAATATTAAAAAAATGCTTACAGTTTACACCTATTTCTACAC
AATTGTTTTTTTCTTCAAAAACCCTAGAAATTTTCCATCTTATTGTAATA
ATTCCGAACCTAGTAGGTGCTTTTTTAAACACACAATTTATACGTCTCTT
GACCACTAACGTTAAAATCAATAGCAAGGTGCGGTATCGATAGATAAATC
ACGACGACTGACGGATTTCATGCCTTCGTTCATGCTACGGAACTTTTTTA
CGGGCTGCCCCGAGGGAAGCTCATTGAGTTTCAAGCCGAAGGCTAGAGGT
CAATCTCTTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCG
GCCTTGAGCGACCCGCCTGGNGAACGAATTTTCGCATGATTTTTTTAGAA
ACAAAGAGGGCGTAGTACGCGTGGTAACTCTATCTTGCTTTTGGTTTAGC
CCGTAGTAAAGTTTCTTAGTTTAGATTAAATGAAGTCTAGAAGTAATTCA
TCCATCGTCGTGATTTATCTATCAATACTTGATGTCGCTTATATCTCTTA
CGGAATTATTTTGATATTCTTTAGGCTTGACGACCACTCCTATAACGCCC
TCGATTATGATCACACCTCTGGTTGACGAAATTAAATTCAATCACGGGAG
TAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGCCACCAGTAGTCTCA
AGAAACCTAAGAAATCACTAGTCAGTACAACTCCTCGCACGCCAACGCCT
TTACGAACGAGCAAGAAAGAGCAAGTATGCACGGATACTAAGCTAGCTAC
CATTGATGAAATTTCTAAATTGTTAATGAAGAAAGCGAATACTTCGAGTG
GGACAACTCCTGACCATGATTATGCAAAATTAACTGAATTGAATTCCATA
GCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCTAGTAAGACTTCTTT
GAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAACTCGATGGTTCGAC
CGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGAATGCTATTGAGCAA
ATGTCCACTTGTTTCACACCTCAAAAACGAAAAGATAATTTGACTACAAC
GACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAAAGTGACTTTTCAAG
ACACATTATCGTCAACTAGTTTTGTCAAGAAAAATGATAAAGGATTCAGT
TTCATTTTGAATTCACAACAAATGCCAAAGATGAGCTTATTTCAACATCC
ACAGCAAAATAAACAACAAGTTGCGCAGCGCCTGAAACAACTTCCCGGGC
GGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAACCAATGAAAATACCT
ATTCGCAGGTTACCTCCACGTAATTTGAAATTTGCAGACGATAGTGGACA
ACGTCAGCAGCTGTTATCACGCCCAAAAACAAACATACGCTCAACGCCCA
CCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGACAAAGTCATGACCAG
AAATTTTTGACTGAACAGGCGCGTTTGATTATGAAGGAAATTCAACAAGC
TAGTCTTATATGACGAATGGTGCTTATTGTTATTTTTTGTTTATATTTAA
GTTTTTTGTTTTAAGTCTTTTGTTATTTTTATTTAAGTTTGTTTTAAAAT
GTTGAATAAGATTGTTTGGTTATGCCTTGTTAACAATTGTTTGAAGCAGC
GGAGCAAATCTATATATTGAGCCCCCCCTCTCACATATAAGCACACGAAT
TTTCGAAAAATAGATGTTCTGAGACTGAGAATCTGGCTCGAATGAATCTG
AAAATTTTGCGATCTTCTTAACTTGTTTATTTGAGAAATTAAATGTGCGG
GAAACAATGTTTAGCCTTGATTGTAAACTAAATTAATCCGGTTGTTCGGT
GAAAGTAAATTATACCTTTGAAATATTCTGATAATTGTATGAAATTCTCA
CCAAGTTGCCTTCCCTTACTTATTATTATGTTAAAATGTTTTATTTTTTT
TAAAAATAAGCTTTAAATATGTTACAATATATTAGGAAAAGTAGGTTTCT
CGTTTTATAATATTCTAGTACTGGCTGGTCCTTCTAGTCATAGTTAGAGA
GACAAGGTATCAGTTAAGTCTAGAAAGCCAACAAAACTGTTTGTAAATTT
TGTGGTAATCTATGCATGAAATTGATGAAAAAATCTAAAAATCTTTCTTG
ACGCAGTGCTCTAGTTCGATTTCAAGTTTAAAGTCGTAGATTTTAGAATC
TCTACGTTTGTTATTTTACAAAAAAAGGTTTTTAAAATGGACTTTTTATT
TTAACGTTTTNCGAATGGTGCTTATTGTTATTTTTTGTTTATATTTAAGT
TTTTTGTTTTAAGTCTTTTGTTATTTTTATTTAAGTTTGTTTTAAAATGT
TGAATAAGATTGTTTGGTTATGCCTTGTTAACAATTGTTTGAAGCAGCGG
AGCAAATCTATATATTGAGCCCCCCCTCTCACATATAAGCACACGAATTT
TCGAAAAATAGATGTTCTGAGACTGAGAATCTGGCTCGAATGAATCTGAA
AATTTTGCGATCTTCTTAACTTGTTTATTTGAGAAATTAAATGTGCGGGA
AACAATGTTTAGCCTTGATTGTAAACTAAATTAATCCGGTTGTTCGG

Coding sequence (CDS) from alignment at scaffold_367:123638..129584-

>TCONS_00062513 ID=TCONS_00062513|Name=TCONS_00062513|organism=Clytia hemisphaerica|type=CDS|length=11220bp|location=Sequence derived from alignment at scaffold_367:123638..129584- (Clytia hemisphaerica)
GCTTGACGACCACTCCTATAACGCCCTCGATTATGATCACACCTCTGGTT
GACGAAATTAAATTCAATCACGGGAGTAGCTCCAAAAAACGAAAACCATT
CTTCAGTAGCGCCACCAGTAGTCTCAAGAAACCTAAGAAATCACTAGTCA
GTACAACTCCTCGCACGCCAACGCCTTTACGAACGAGCAAGAAAGAGCAA
GTATGCACGGATACTAAGCTAGCTACCATTGATGAAATTTCTAAATTGTT
AATGAAGAAAGCGAATACTTCGAGTGGGACAACTCCTGACCATGATTATG
CAAAATTAACTGAATTGAATTCCATAGCTGTGGATTCGAGCAATGACTTT
TCCAGCGGTTCTAGTAAGACTTCTTTGAGGCGGACCCTTTTTGATGAGAC
GCCCTGTCAAAACTCGATGGTTCGACCGCTCGGCGTGAACTTGTTTACTG
AGAAAGAACTGAATGCTATTGAGCAAATGTCCACTTGTTTCACACCTCAA
AAACGAAAAGATAATTTGACTACAACGACGGCAGCCGAAAGTAAAGAGAA
GTCACAGCACAAAGTGACTTTTCAAGACACATTATCGTCAACTAGTTTTG
TCAAGAAAAATGATAAAGGATTCAGTTTCATTTTGAATTCACAACAAATG
CCAAAGATGAGCTTATTTCAACATCCACAGCAAAATAAACAACAAGTTGC
GCAGCGCCTGAAACAACTTCCCGGGCGGCAAGAGATTCGTATTTTACCGC
TGGTCGGGAAACCAATGAAAATACCTATTCGCAGGTTACCTCCACGTAAT
TTGAAATTTGCAGACGATAGTGGACAACGTCAGCAGCTGTTATCACGCCC
AAAAACAAACATACGCTCAACGCCCACCCAGGGTGATGCTTTCCGGGCGG
TAGCTTTCGGACAAAGTCATGACCAGAAATTTTTGACTGAACAGGCGCGT
TTGATTATGAAGGAAATTCAACAAGCTAGTCTTATATGAGAGTCTCACTT
CCATCCCTGGACGCTACAGCATGCCACCGAGTATTTTACGTCGATCTAAG
AAGTTTCCATTCTTGGATGCTTCCAACAATACGTTCAGCAAAGATGAATC
CATTGTTTCGTACCAACAACTGGGCTTCTCACCTTCAGCATTTCTGAACA
CTTCAAATTCGTATAATGGAGAAACTTCAAAAGAAATGGTCACTTCGACA
CCAGCTAAAGGTTTTGGACCCTAGTCTCATCAAAGGTGCATGGACAAAGG
AAGAAGATGACCTTGTAGTTCAACTGGTCAATCAATATGGTCCAAAGAAA
TGGTCACTCATTGCTTCACACCTTCAAGGACGTATTGGTAAACAATGTCG
TGAAAGATGGCATAACCATCTGAATCCCAATGTCAACAAACAAGCATGGT
CTGAAGAAGAAGATCGACTCATCTACGAAGCACATTCCCAAATCGGTAAT
CGTTGGGCGGACATTGCTAAATTGTTGCCAGGCCGAACTGATAATGCTAT
CAAGAATCATTGGAATTCGACCATGAAACGACGCTTCGAACCCGGTTTTC
GTCAACGTACTAAACGTGAAGAGCGTCGTATTATTGCCGCCGTCGCCGAT
AAGGAAAACGTCTACCCAAGATGCACTTCTTCGTCAACTGTCACTGGTCG
AGATCAGCTCATTTCGTCACAAAGTCTGGTCAGTAAACCCATGCATGATT
TACTACCGATATGCGACGAAGACGGGGGCATCAACATCAAATTGGAACCT
GAGGATCACAATAACCAGTTCAGCGATATCGAACCTGATCCAGACCTGGT
CATCACACCGTTGAAAGACATTAAAAATTTCTCAGATATTTTAGCAGAGA
TGGGTGGCGTAGATGGGATCTTACAAACATCACAAATGCACCCGTTGGCT
GATGACAATAAAGAGAATTTCATCCCGTTGATTGAAACGCAACCGCATGA
ACAACAGAACACCACCACTACACAAAACAGCTTCTGCCCATCATCAAACT
TCATCAACACCATCCGTATCCAAGACAACGAAATCAAGCAACAACAGCAA
CTACCGAGAAGCATCAAAGGCAAATGGACCAAGTCTGAAGATGAGAAATT
GAAGACATTGTGTGTCTCTTTGGGCACTGATAACTGGTCGGCCATTGGTA
ACCATTTCCCTCAAAGAACTGAAGTACAATGTCAACAACGATGGAGAAAG
ATGGATAACCATCTAGTCAATTACAACTATGGTAGTAAATCTAGGCTTGA
CGACCACTCCTATAACGCCCTCGATTATGATCACACCTCTGGTTGACGAA
ATTAAATTCAATCACGGGAGTAGCTCCAAAAAACGAAAACCATTCTTCAG
TAGCGCCACCAGTAGTCTCAAGAAACCTAAGAAATCACTAGTCAGTACAA
CTCCTCGCACGCCAACGCCTTTACGAACGAGCAAGAAAGAGCAAGTATGC
ACGGATACTAAGCTAGCTACCATTGATGAAATTTCTAAATTGTTAATGAA
GAAAGCGAATACTTCGAGTGGGACAACTCCTGACCATGATTATGCAAAAT
TAACTGAATTGAATTCCATAGCTGTGGATTCGAGCAATGACTTTTCCAGC
GGTTCTAGTAAGACTTCTTTGAGGCGGACCCTTTTTGATGAGACGCCCTG
TCAAAACTCGATGGTTCGACCGCTCGGCGTGAACTTGTTTACTGAGAAAG
AACTGAATGCTATTGAGCAAATGTCCACTTGTTTCACACCTCAAAAACGA
AAAGATAATTTGACTACAACGACGGCAGCCGAAAGTAAAGAGAAGTCACA
GCACAAAGTGACTTTTCAAGACACATTATCGTCAACTAGTTTTGTCAAGA
AAAATGATAAAGGATTCAGTTTCATTTTGAATTCACAACAAATGCCAAAG
ATGAGCTTATTTCAACATCCACAGCAAAATAAACAACAAGTTGCGCAGCG
CCTGAAACAACTTCCCGGGCGGCAAGAGATTCGTATTTTACCGCTGGTCG
GGAAACCAATGAAAATACCTATTCGCAGGTTACCTCCACGTAATTTGAAA
TTTGCAGACGATAGTGGACAACGTCAGCAGCTGTTATCACGCCCAAAAAC
AAACATACGCTCAACGCCCACCCAGGGTGATGCTTTCCGGGCGGTAGCTT
TCGGACAAAGTCATGACCAGAAATTTTTGACTGAACAGGCGCGTTTGATT
ATGAAGGAAATTCAACAAGCTAGTCTTATATGAGAGTCTCACTTCCATCC
CTGGACGCTACAGCATGCCACCGAGTATTTTACGTCGATCTAAGAAGTTT
CCATTCTTGGATGCTTCCAACAATACGTTCAGCAAAGATGAATCCATTGT
TTCGTACCAACAACTGGGCTTCTCACCTTCAGCATTTCTGAACACTTCAA
ATTCGTATAATGGAGAAACTTCAAAAGAAATGGTCACTTCGACACCAGCT
AAAGGTTTTGGACCCTAGTCTCATCAAAGGTGCATGGACAAAGGAAGAAG
ATGACCTTGTAGTTCAACTGGTCAATCAATATGGTCCAAAGAAATGGTCA
CTCATTGCTTCACACCTTCAAGGACGTATTGGTAAACAATGTCGTGAAAG
ATGGCATAACCATCTGAATCCCAATGTCAACAAACAAGCATGGTCTGAAG
AAGAAGATCGACTCATCTACGAAGCACATTCCCAAATCGGTAATCGTTGG
GCGGACATTGCTAAATTGTTGCCAGGCCGAACTGATAATGCTATCAAGAA
TCATTGGAATTCGACCATGAAACGACGCTTCGAACCCGGTTTTCGTCAAC
GTACTAAACGTGAAGAGCGTCGTATTATTGCCGCCGTCGCCGATAAGGAA
AACGTCTACCCAAGATGCACTTCTTCGTCAACTGTCACTGGTCGAGATCA
GCTCATTTCGTCACAAAGTCTGGTCAGTAAACCCATGCATGATTTACTAC
CGATATGCGACGAAGACGGGGGCATCAACATCAAATTGGAACCTGAGGAT
CACAATAACCAGTTCAGCGATATCGAACCTGATCCAGACCTGGTCATCAC
ACCGTTGAAAGACATTAAAAATTTCTCAGATATTTTAGCAGAGATGGGTG
GCGTAGATGGGATCTTACAAACATCACAAATGCACCCGTTGGCTGATGAC
AATAAAGAGAATTTCATCCCGTTGATTGAAACGCAACCGCATGAACAACA
GAACACCACCACTACACAAAACAGCTTCTGCCCATCATCAAACTTCATCA
ACACCATCCGTATCCAAGACAACGAAATCAAGCAACAACAGCAACTACCG
AGAAGCATCAAAGGCAAATGGACCAAGTCTGAAGATGAGAAATTGAAGAC
ATTGTGTGTCTCTTTGGGCACTGATAACTGGTCGGCCATTGGTAACCATT
TCCCTCAAAGAACTGAAGTACAATGTCAACAACGATGGAGAAAGATGGAT
AACCATCTAGTCAATTACAACTATGGTAGTAAATCTAGGCTTGACGACCA
CTCCTATAACGCCCTCGATTATGATCACACCTCTGGTTGACGAAATTAAA
TTCAATCACGGGAGTAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGC
CACCAGTAGTCTCAAGAAACCTAAGAAATCACTAGTCAGTACAACTCCTC
GCACGCCAACGCCTTTACGAACGAGCAAGAAAGAGCAAGTATGCACGGAT
ACTAAGCTAGCTACCATTGATGAAATTTCTAAATTGTTAATGAAGAAAGC
GAATACTTCGAGTGGGACAACTCCTGACCATGATTATGCAAAATTAACTG
AATTGAATTCCATAGCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCT
AGTAAGACTTCTTTGAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAA
CTCGATGGTTCGACCGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGA
ATGCTATTGAGCAAATGTCCACTTGTTTCACACCTCAAAAACGAAAAGAT
AATTTGACTACAACGACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAA
AGTGACTTTTCAAGACACATTATCGTCAACTAGTTTTGTCAAGAAAAATG
ATAAAGGATTCAGTTTCATTTTGAATTCACAACAAATGCCAAAGATGAGC
TTATTTCAACATCCACAGCAAAATAAACAACAAGTTGCGCAGCGCCTGAA
ACAACTTCCCGGGCGGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAAC
CAATGAAAATACCTATTCGCAGGTTACCTCCACGTAATTTGAAATTTGCA
GACGATAGTGGACAACGTCAGCAGCTGTTATCACGCCCAAAAACAAACAT
ACGCTCAACGCCCACCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGAC
AAAGTCATGACCAGAAATTTTTGACTGAACAGGCGCGTTTGATTATGAAG
GAAATTCAACAAGCTAGTCTTATATGAGAGTCTCACTTCCATCCCTGGAC
GCTACAGCATGCCACCGAGTATTTTACGTCGATCTAAGAAGTTTCCATTC
TTGGATGCTTCCAACAATACGTTCAGCAAAGATGAATCCATTGTTTCGTA
CCAACAACTGGGCTTCTCACCTTCAGCATTTCTGAACACTTCAAATTCGT
ATAATGGAGAAACTTCAAAAGAAATGGTCACTTCGACACCAGCTAAAGGT
TTTGGACCCTAGTCTCATCAAAGGTGCATGGACAAAGGAAGAAGATGACC
TTGTAGTTCAACTGGTCAATCAATATGGTCCAAAGAAATGGTCACTCATT
GCTTCACACCTTCAAGGACGTATTGGTAAACAATGTCGTGAAAGATGGCA
TAACCATCTGAATCCCAATGTCAACAAACAAGCATGGTCTGAAGAAGAAG
ATCGACTCATCTACGAAGCACATTCCCAAATCGGTAATCGTTGGGCGGAC
ATTGCTAAATTGTTGCCAGGCCGAACTGATAATGCTATCAAGAATCATTG
GAATTCGACCATGAAACGACGCTTCGAACCCGGTTTTCGTCAACGTACTA
AACGTGAAGAGCGTCGTATTATTGCCGCCGTCGCCGATAAGGAAAACGTC
TACCCAAGATGCACTTCTTCGTCAACTGTCACTGGTCGAGATCAGCTCAT
TTCGTCACAAAGTCTGGTCAGTAAACCCATGCATGATTTACTACCGATAT
GCGACGAAGACGGGGGCATCAACATCAAATTGGAACCTGAGGATCACAAT
AACCAGTTCAGCGATATCGAACCTGATCCAGACCTGGTCATCACACCGTT
GAAAGACATTAAAAATTTCTCAGATATTTTAGCAGAGATGGGTGGCGTAG
ATGGGATCTTACAAACATCACAAATGCACCCGTTGGCTGATGACAATAAA
GAGAATTTCATCCCGTTGATTGAAACGCAACCGCATGAACAACAGAACAC
CACCACTACACAAAACAGCTTCTGCCCATCATCAAACTTCATCAACACCA
TCCGTATCCAAGACAACGAAATCAAGCAACAACAGCAACTACCGAGAAGC
ATCAAAGGCAAATGGACCAAGTCTGAAGATGAGAAATTGAAGACATTGTG
TGTCTCTTTGGGCACTGATAACTGGTCGGCCATTGGTAACCATTTCCCTC
AAAGAACTGAAGTACAATGTCAACAACGATGGAGAAAGATGGATAACCAT
CTAGTCAATTACAACTATGGTAGTAAATCTAGGCTTGACGACCACTCCTA
TAACGCCCTCGATTATGATCACACCTCTGGTTGACGAAATTAAATTCAAT
CACGGGAGTAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGCCACCAG
TAGTCTCAAGAAACCTAAGAAATCACTAGTCAGTACAACTCCTCGCACGC
CAACGCCTTTACGAACGAGCAAGAAAGAGCAAGTATGCACGGATACTAAG
CTAGCTACCATTGATGAAATTTCTAAATTGTTAATGAAGAAAGCGAATAC
TTCGAGTGGGACAACTCCTGACCATGATTATGCAAAATTAACTGAATTGA
ATTCCATAGCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCTAGTAAG
ACTTCTTTGAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAACTCGAT
GGTTCGACCGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGAATGCTA
TTGAGCAAATGTCCACTTGTTTCACACCTCAAAAACGAAAAGATAATTTG
ACTACAACGACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAAAGTGAC
TTTTCAAGACACATTATCGTCAACTAGTTTTGTCAAGAAAAATGATAAAG
GATTCAGTTTCATTTTGAATTCACAACAAATGCCAAAGATGAGCTTATTT
CAACATCCACAGCAAAATAAACAACAAGTTGCGCAGCGCCTGAAACAACT
TCCCGGGCGGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAACCAATGA
AAATACCTATTCGCAGGTTACCTCCACGTAATTTGAAATTTGCAGACGAT
AGTGGACAACGTCAGCAGCTGTTATCACGCCCAAAAACAAACATACGCTC
AACGCCCACCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGACAAAGTC
ATGACCAGAAATTTTTGACTGAACAGGCGCGTTTGATTATGAAGGAAATT
CAACAAGCTAGTCTTATATGAGAGTCTCACTTCCATCCCTGGACGCTACA
GCATGCCACCGAGTATTTTACGTCGATCTAAGAAGTTTCCATTCTTGGAT
GCTTCCAACAATACGTTCAGCAAAGATGAATCCATTGTTTCGTACCAACA
ACTGGGCTTCTCACCTTCAGCATTTCTGAACACTTCAAATTCGTATAATG
GAGAAACTTCAAAAGAAATGGTCACTTCGACACCAGCTAAAGGTTTTGGA
CCCTAGTCTCATCAAAGGTGCATGGACAAAGGAAGAAGATGACCTTGTAG
TTCAACTGGTCAATCAATATGGTCCAAAGAAATGGTCACTCATTGCTTCA
CACCTTCAAGGACGTATTGGTAAACAATGTCGTGAAAGATGGCATAACCA
TCTGAATCCCAATGTCAACAAACAAGCATGGTCTGAAGAAGAAGATCGAC
TCATCTACGAAGCACATTCCCAAATCGGTAATCGTTGGGCGGACATTGCT
AAATTGTTGCCAGGCCGAACTGATAATGCTATCAAGAATCATTGGAATTC
GACCATGAAACGACGCTTCGAACCCGGTTTTCGTCAACGTACTAAACGTG
AAGAGCGTCGTATTATTGCCGCCGTCGCCGATAAGGAAAACGTCTACCCA
AGATGCACTTCTTCGTCAACTGTCACTGGTCGAGATCAGCTCATTTCGTC
ACAAAGTCTGGTCAGTAAACCCATGCATGATTTACTACCGATATGCGACG
AAGACGGGGGCATCAACATCAAATTGGAACCTGAGGATCACAATAACCAG
TTCAGCGATATCGAACCTGATCCAGACCTGGTCATCACACCGTTGAAAGA
CATTAAAAATTTCTCAGATATTTTAGCAGAGATGGGTGGCGTAGATGGGA
TCTTACAAACATCACAAATGCACCCGTTGGCTGATGACAATAAAGAGAAT
TTCATCCCGTTGATTGAAACGCAACCGCATGAACAACAGAACACCACCAC
TACACAAAACAGCTTCTGCCCATCATCAAACTTCATCAACACCATCCGTA
TCCAAGACAACGAAATCAAGCAACAACAGCAACTACCGAGAAGCATCAAA
GGCAAATGGACCAAGTCTGAAGATGAGAAATTGAAGACATTGTGTGTCTC
TTTGGGCACTGATAACTGGTCGGCCATTGGTAACCATTTCCCTCAAAGAA
CTGAAGTACAATGTCAACAACGATGGAGAAAGATGGATAACCATCTAGTC
AATTACAACTATGGTAGTAAATCTAGGCTTGACGACCACTCCTATAACGC
CCTCGATTATGATCACACCTCTGGTTGACGAAATTAAATTCAATCACGGG
AGTAGCTCCAAAAAACGAAAACCATTCTTCAGTAGCGCCACCAGTAGTCT
CAAGAAACCTAAGAAATCACTAGTCAGTACAACTCCTCGCACGCCAACGC
CTTTACGAACGAGCAAGAAAGAGCAAGTATGCACGGATACTAAGCTAGCT
ACCATTGATGAAATTTCTAAATTGTTAATGAAGAAAGCGAATACTTCGAG
TGGGACAACTCCTGACCATGATTATGCAAAATTAACTGAATTGAATTCCA
TAGCTGTGGATTCGAGCAATGACTTTTCCAGCGGTTCTAGTAAGACTTCT
TTGAGGCGGACCCTTTTTGATGAGACGCCCTGTCAAAACTCGATGGTTCG
ACCGCTCGGCGTGAACTTGTTTACTGAGAAAGAACTGAATGCTATTGAGC
AAATGTCCACTTGTTTCACACCTCAAAAACGAAAAGATAATTTGACTACA
ACGACGGCAGCCGAAAGTAAAGAGAAGTCACAGCACAAAGTGACTTTTCA
AGACACATTATCGTCAACTAGTTTTGTCAAGAAAAATGATAAAGGATTCA
GTTTCATTTTGAATTCACAACAAATGCCAAAGATGAGCTTATTTCAACAT
CCACAGCAAAATAAACAACAAGTTGCGCAGCGCCTGAAACAACTTCCCGG
GCGGCAAGAGATTCGTATTTTACCGCTGGTCGGGAAACCAATGAAAATAC
CTATTCGCAGGTTACCTCCACGTAATTTGAAATTTGCAGACGATAGTGGA
CAACGTCAGCAGCTGTTATCACGCCCAAAAACAAACATACGCTCAACGCC
CACCCAGGGTGATGCTTTCCGGGCGGTAGCTTTCGGACAAAGTCATGACC
AGAAATTTTTGACTGAACAGGCGCGTTTGATTATGAAGGAAATTCAACAA
GCTAGTCTTATATGAGAGTCTCACTTCCATCCCTGGACGCTACAGCATGC
CACCGAGTATTTTACGTCGATCTAAGAAGTTTCCATTCTTGGATGCTTCC
AACAATACGTTCAGCAAAGATGAATCCATTGTTTCGTACCAACAACTGGG
CTTCTCACCTTCAGCATTTCTGAACACTTCAAATTCGTATAATGGAGAAA
CTTCAAAAGAAATGGTCACTTCGACACCAGCTAAAGGTTTTGGACCCTAG
TCTCATCAAAGGTGCATGGACAAAGGAAGAAGATGACCTTGTAGTTCAAC
TGGTCAATCAATATGGTCCAAAGAAATGGTCACTCATTGCTTCACACCTT
CAAGGACGTATTGGTAAACAATGTCGTGAAAGATGGCATAACCATCTGAA
TCCCAATGTCAACAAACAAGCATGGTCTGAAGAAGAAGATCGACTCATCT
ACGAAGCACATTCCCAAATCGGTAATCGTTGGGCGGACATTGCTAAATTG
TTGCCAGGCCGAACTGATAATGCTATCAAGAATCATTGGAATTCGACCAT
GAAACGACGCTTCGAACCCGGTTTTCGTCAACGTACTAAACGTGAAGAGC
GTCGTATTATTGCCGCCGTCGCCGATAAGGAAAACGTCTACCCAAGATGC
ACTTCTTCGTCAACTGTCACTGGTCGAGATCAGCTCATTTCGTCACAAAG
TCTGGTCAGTAAACCCATGCATGATTTACTACCGATATGCGACGAAGACG
GGGGCATCAACATCAAATTGGAACCTGAGGATCACAATAACCAGTTCAGC
GATATCGAACCTGATCCAGACCTGGTCATCACACCGTTGAAAGACATTAA
AAATTTCTCAGATATTTTAGCAGAGATGGGTGGCGTAGATGGGATCTTAC
AAACATCACAAATGCACCCGTTGGCTGATGACAATAAAGAGAATTTCATC
CCGTTGATTGAAACGCAACCGCATGAACAACAGAACACCACCACTACACA
AAACAGCTTCTGCCCATCATCAAACTTCATCAACACCATCCGTATCCAAG
ACAACGAAATCAAGCAACAACAGCAACTACCGAGAAGCATCAAAGGCAAA
TGGACCAAGTCTGAAGATGAGAAATTGAAGACATTGTGTGTCTCTTTGGG
CACTGATAACTGGTCGGCCATTGGTAACCATTTCCCTCAAAGAACTGAAG
TACAATGTCAACAACGATGGAGAAAGATGGATAACCATCTAGTCAATTAC
AACTATGGTAGTAAATCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039173XLOC_039173Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062513-exon-scaffold_367-1575043694:129463..129584TCONS_00062513-exon-scaffold_367-1575043694:129463..129584Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1575043694:128728..128947TCONS_00062513-exon-scaffold_367-1575043694:128728..128947Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1575043694:126990..127759TCONS_00062513-exon-scaffold_367-1575043694:126990..127759Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1575043694:126486..126706TCONS_00062513-exon-scaffold_367-1575043694:126486..126706Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1575043694:124565..125710TCONS_00062513-exon-scaffold_367-1575043694:124565..125710Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1575043694:123638..123815TCONS_00062513-exon-scaffold_367-1575043694:123638..123815Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:129463..129584TCONS_00062513-exon-scaffold_367-1510915933:129463..129584Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:128728..128947TCONS_00062513-exon-scaffold_367-1510915933:128728..128947Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:126990..127759TCONS_00062513-exon-scaffold_367-1510915933:126990..127759Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:126486..126706TCONS_00062513-exon-scaffold_367-1510915933:126486..126706Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:124565..125710TCONS_00062513-exon-scaffold_367-1510915933:124565..125710Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1510915933:123638..123815TCONS_00062513-exon-scaffold_367-1510915933:123638..123815Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:129463..129584TCONS_00062513-exon-scaffold_367-1491911889:129463..129584Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:128728..128947TCONS_00062513-exon-scaffold_367-1491911889:128728..128947Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:126990..127759TCONS_00062513-exon-scaffold_367-1491911889:126990..127759Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:126486..126706TCONS_00062513-exon-scaffold_367-1491911889:126486..126706Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:124565..125710TCONS_00062513-exon-scaffold_367-1491911889:124565..125710Clytia hemisphaericaexon
TCONS_00062513-exon-scaffold_367-1491911889:123638..123815TCONS_00062513-exon-scaffold_367-1491911889:123638..123815Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062513-proteinTCONS_00062513-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:123638..129584 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.13036	4.84745	1.87065	1.55722	83.5506	61.8684	30.0355	30.1249	20.9079	26.987	21.2608	13.561	6.68914	6.72653	7.36526	7.43599	13.2077	9.79069	3.97472	5.27162	6.6558	7.54547	9.17251	9.97071	19.0454	22.5246	4.61034	2.58739	7.67283	7.73545
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
Blast
[Close]
BLAST of TCONS_00062513 vs. Swiss-Prot (Human)
Match: MYB (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 5.983e-74
Identity = 112/172 (65.12%), Postives = 139/172 (80.81%), Query Frame = 1 
Query:  208 KGKWTKSEDEKLKTLCVSLGTDNWSAIGNHFPQRTEVQCQQRWRKVLDPSLIKGAWTKEEDDLVVQLVNQYGPKKWSLIASHLQGRIGKQCRERWHNHLNPNVNKQAWSEEEDRLIYEAHSQIGNRWADIAKLLPGRTDNAIKNHWNSTMKRRFE-PGFRQRTKREERRIIA 720
            K +WT+ EDEKLK L    GTD+W  I N+ P RT+VQCQ RW+KVL+P LIKG WTKEED  V++LV +YGPK+WS+IA HL+GRIGKQCRERWHNHLNP V K +W+EEEDR+IY+AH ++GNRWA+IAKLLPGRTDNAIKNHWNSTM+R+ E  G+ Q + +  +  +A
Sbjct:   40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211
The following BLAST results are available for this feature:
BLAST of TCONS_00062513 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYB5.983e-7465.12Transcriptional activator Myb OS=Homo sapiens GN=M... [more]
back to top