TCONS_00062444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062444
Unique NameTCONS_00062444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062444 ID=TCONS_00062444|Name=TCONS_00062444|organism=Clytia hemisphaerica|type=transcript|length=177bp
TGGAAACAAAGTCTACAATACGTAATGCTTTACCTCTAGTGATGTCATTT
GTACGTGTTGGGCGCAGGAAAAGTTCATTTTGTGTAAATTGGCGATTGAC
AAACGAAGGATCTTGACCATTCAAACCAGGATTCAACAAGGGAACAGTAG
CACCAGTAGCAGCAAAACCAAACGAAg
Run BLAST on NCBI

transcript from alignment at scaffold_364:11553..11729

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062444 ID=TCONS_00062444|Name=TCONS_00062444|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at scaffold_364:11553..11729 (Clytia hemisphaerica)
cTTCGTTTGGTTTTGCTGCTACTGGTGCTACTGTTCCCTTGTTGAATCCT
GGTTTGAATGGTCAAGATCCTTCGTTTGTCAATCGCCAATTTACACAAAA
TGAACTTTTCCTGCGCCCAACACGTACAAATGACATCACTAGAGGTAAAG
CATTACGTATTGTAGACTTTGTTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039111XLOC_039111Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062444-exon-scaffold_364-1491911889:11553..11729TCONS_00062444-exon-scaffold_364-1491911889:11553..11729Clytia hemisphaericaexon
TCONS_00062444-exon-scaffold_364-1510915933:11553..11729TCONS_00062444-exon-scaffold_364-1510915933:11553..11729Clytia hemisphaericaexon
TCONS_00062444-exon-scaffold_364-1575043694:11553..11729TCONS_00062444-exon-scaffold_364-1575043694:11553..11729Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:11553..11729 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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