TCONS_00062439 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062439
Unique NameTCONS_00062439
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1749

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062439 ID=TCONS_00062439|Name=TCONS_00062439|organism=Clytia hemisphaerica|type=transcript|length=1749bp
AGGTTCCGCCCAAAACTCAATCTCGTCCCCATGacgatttgctttttata
taggATGTAGCAACGATATGTAGAAACgaccatcaaaattataaagGCCC
TGGGAACGAGGTTGCCTAAAACTATTTCTTTTGACGTCGGTAGGGTCCAG
GGGCCAGACCTCAAGCTAAAAATGGTATCCTTCGTTGCGAACTAGAAAAT
TTTCTGAAGCGTGGCTCACACATGGTCACATCTGCATCAAAATGAAATAC
CACAACCACTGAATAGGCAACAACGATCAAAGATCATGTTTGAAGTAGAG
ATGGATGGTCATGAAAATGtggaaatcgaaagtgaaagtgactgGGATAG
CGAGGGTGAAAATCCTTCTGAAAGTGAATTGGACAGTGACGTCGAAATCA
AAAACTCACTTGCCACCTCTGCAatGGATGGATTTGGGAACTTGTTATCT
TCAAATACAAAGAATAATGAAGCCATAGATATTATAAAAGAAATCCATTC
AGCTCTTCTACTGGTCCATCAATCAGGAATCCAATACTTTGGATATCTAT
TGGAAAATGATAATTCCAGAATTGAGAAAGGGATTAAATCACTGGTAGGA
GTAGATCAATTTATTGTAAGAAGTatggaaaaagctaacaaagaATTACC
AGAAGCTGTACAATTTTCATTCCACTTGGCAGAATTGACAAGAACTGTCA
CTGGTGAAACGCAAATAAACTCTCAGGAAAAAAAGATTAAAGGCACCAGA
ACAAGCAACAAAGTAACAAATGCAAACAACCTAGATGGCTCGATGAaata
tttggaaagttttcccATCAATATCAAAGAAAGTTTGTTGGGGAGAAGTG
AAACAATTGACTGGGGTACACCAAATGAATCACTTATGAAAAAGGTTTAT
TCAAGATTTATTGTTATAGCCATTgccaaaaaacactattttgaGACACT
TTGTTCATCTTACTCGCCATTACCCTGTATTCAATTTCTCATGGAAGAGC
AACAAACTTCACATCCTaatttcaaaaagcatttaagATTATTTTTGAGA
GAATATCCAGCAAATTTGTATGTGGAACACCAATCAGATACTATTATTGT
TatttcaaatttgttgaaagaggCTCAAATGCCTGATTTGACCTTACTTT
ATTTAAAGCAGCTCATAATATCGAAAGTTAAGCATAAAGAGGAACTTGTT
TATCAGATCTGTGATGGCACTGAAGAACCAATAGCAGAATTATTCAAATC
TGTGTCTTGGGAAGACATCAAAGCGACAGTAGAAAAAGTTGTGGAAAAAT
GTCATTGGAAACAGCATATTAAATGGTTGGATATCGCTTCCAAAAGTGGA
ATAAATGAAATCGCTGATATAGTCATTTGTATTGCGTTATATAATCTCGA
AAATTCTGACGATATTCCAAAGCGAGGTTTATGGGTCAAAATCTTCGTGC
AAATATTCAATAATGATCGTCTATTTGAAAGTTGGTTCGACTCTCTTTTA
AAATGTGAAGATATTACAAAAGATATGGAACTAACTGGGAAACTGTGTGA
ATTTATCCCGTCTAAACACCATTCGCTCCTCTTTCTAATGAAATGTTTTG
TTGAGAATGTATATGAACAAGGATATTTGGGTCTCACCGATAAAGACACC
GAAGATTTTTGCAATACTGTTTTGATCCTTGTTAATAACTATGATCGATC
CAAGCAGGAATTAACCGATTTGTGTGATTGTCTACTGGTTAATGATAAC
Run BLAST on NCBI

protein sequence of TCONS_00062439-protein

>TCONS_00062439-protein ID=TCONS_00062439-protein|Name=TCONS_00062439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MFEVEMDGHENVEIESESDWDSEGENPSESELDSDVEIKNSLATSAMDGF
GNLLSSNTKNNEAIDIIKEIHSALLLVHQSGIQYFGYLLENDNSRIEKGI
KSLVGVDQFIVRSMEKANKELPEAVQFSFHLAELTRTVTGETQINSQEKK
IKGTRTSNKVTNANNLDGSMKYLESFPINIKESLLGRSETIDWGTPNESL
MKKVYSRFIVIAIAKKHYFETLCSSYSPLPCIQFLMEEQQTSHPNFKKHL
RLFLREYPANLYVEHQSDTIIVISNLLKEAQMPDLTLLYLKQLIISKVKH
KEELVYQICDGTEEPIAELFKSVSWEDIKATVEKVVEKCHWKQHIKWLDI
ASKSGINEIADIVICIALYNLENSDDIPKRGLWVKIFVQIFNNDRLFESW
FDSLLKCEDITKDMELTGKLCEFIPSKHHSLLFLMKCFVENVYEQGYLGL
TDKDTEDFCNTVLILVNNYDRSKQELTDLCDCLLVNDN
Run BLAST on NCBI

transcript from alignment at scaffold_364:370477..385415-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062439 ID=TCONS_00062439|Name=TCONS_00062439|organism=Clytia hemisphaerica|type=transcript|length=14939bp|location=Sequence derived from alignment at scaffold_364:370477..385415- (Clytia hemisphaerica)
AGGTTCCGCCCAAAACTCAATCTCGTCCCCATGACGATTTGCTTTTTATA
TAGGATGTAGCAACGATATGTAGAAACGACCATCAAAATTATAAAGGCCC
TGGGAACGAGGTTGCCTAAAACTATTTCTTTTGACGTCGGTAGGGTCCAG
GGGCCAGACCTCAAGCTAAAAATGGTATCCTTCGTTGCGAACTAGAAAAT
TTTCTGAAGCGTGGCTCACACATGGTCACATCTGCATCAAAATGAAATAC
CACAACCACTGAATAGGCAACAGTAGGTAGATATATATGCACAGTGTCCT
CCCCTCCCCGTTTCCATTGGGGGAACTTTTTGAAAAACTAGAAAAGAGGG
GGGAAATACTTTTTAAAATTTTTAAATATGTCCAAAAAAAGCAGATTGTG
AAAAAAATCTTATGTTCAATCTTGTCTGATGAAATATTTGTTCAATAAAA
AAGAGGCTTTGTAATTTACACTTGAAAGTTTTTTCTTTACAGGGACTCAA
GTCAAAGTGACTCTAAGGCTTTTTTAAGAGGGGGAACTAACCCTACAGGA
CACACTGGTGGGGGACGTACGAGGGTTGCCAACACCGAAATACCGACAGA
TTTTTCTTAAATCACCGTAATACCGACAAAATTTTCCTAAAACACCGACA
CCGACGTCTTTTAGAGCAAGCTTAAGATTTTTATTCTTAGTACGAATGCT
CAATATCACGAGCATAGTAGTGCACTAGTTCAATTTTTCTTGCAGAAAAC
TATCGCCGATTCAAGGGTTTCAAATCTTTAAAGCTCAGTTTTTCAACGAC
TAGTGGATAAACAAATCCAGAATTTTTAGGGAACACTTTGAAGGGTTTAA
AGTGCTATTTTTGCTTTAGTGCTTACTTTAGTGCTTACTTTAGTTGACTT
TGAAGAAAAACATTTAAAAAGTTTTTATTAAAAGATCTTTGCAAAAAACG
AGGGAACAAAAGAGATATCTGAATGTATAAAGTAATGGAGGACAAGGCGC
AACCATGGTTTGCGCAAACGGAGAAAATTTTCTTATTTTTGTCCTCTTGT
TTAGCTAAAAGAGATATTTTTGAACGTTATTAGAAGTAAATCTACCTTAG
CCGAAAGCACCGTTAGAAAAGGGTGCTGCAAAAGAGCTCTTGTTCAGTAG
CGACCTGGCTTAATTTTCTCGATGGTGCAAACTATGAAATAGGCGCCCCT
GGTATTTTTTGTCCTTATTTGCGCCNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNCGAAGATGGTGGTAATGATAACTTG
ATATTTATTTCCTTGTAATTTGAAATGTAAAAATCTTCTGGACAAGGAGG
CGCAACCATGGTTTGCGCCGACAGAAAACTTTTCAACTTTCAACTTTCAA
TCTGTCTAAAAACGCCCCATATTATACCGATTTAGCACCAAAAATAAAGC
CCTCAAATAAAATACATTGCTGTTATACTTGAAATTGAAATTTTGTACCT
AAGGCGATTTTGTAAGGCGATTTGTTCTATTTGAATTTAACACAGGTTAA
ATCGCGGTTTAACCTTTATTTGATAAGCGCCACATACAGTTTGAATGGCT
GGGTGGCCGCCCTCCGCCAACTGAGTCTACTTTGCTAATAGCCACGTGAT
GTCATGTTCATAATGGCCATCGCATCGCCCTGTTCAAGTCGACGCTCTAA
CTGAAAGCTGACAGGATGAAATATTGTTACCTCCCTCCCTCCCTGCAGTT
ATGGTTGTAGGCGATCCTCACTTATTTATACTAATATTGTATTTATCGGG
ACAAATTTTCCCCAAAACTTACTATTCGAGGANNNNNNNNNNNNNNNNNN
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TTACTTAAAACACCGAAACACCGACGCAAAAAAGGGTCAATACCGACACA
CCGACAAACCCGTACGCCCCCCCCCCACACTGGGTTGTTTTATTGTTCCA
ATTCTATTTTCCTTCCTTAAATTACAAACTATTTTGGCTTTTCCTTTTGC
CTTTATTACAGTCCAAATTTATTAAATTTGAGCAAAAAGAATACTGTCAC
TGTCAACAGAATAAACAAAGACATTTTTCTCATCCTACAGACGATCAAAG
ATCATGTTTGAAGTAGAGATGGATGGTCATGAAAATGTGGAAATCGAAAG
TGAAAGTGACTGGGATAGCGAGGGTGAAAATCCTTCTGAAAGTGAATTGG
ACAGTGACGTCGAAATCAAAAACTCACTTGCCACCTCTGCAGTAAGTTAA
AATATAATAAAAAAGGTGTTAAAGTGATTTGACAGCATTGATAAAAGATA
ACAAAAGACTTATCTTTTGCTTTGTTACGACATACAGNAGTTAAAGTGAT
TTGACAACATTGATAATACAACATACAGATTTTTTTCCATTTTAGATGGA
TGGATTTGGGAACTTGTTATCTTCAAATACAAAGAATAATGAAGCCATAG
ATATTATAAAAGAAATCCATTCAGCTCTTCTACTGGTAAATGATTTTGTT
TTAATCATTTAGTTCAACTTTTTGGACGTACCCCGGTGGGGTGGAGGTCC
TATAAATTAACCTGTGTTTGTTCGTTCGTCGGTTTGTACGTTCATTCGTC
CGTTACCAACTTTTCTCAGGATTGAATAATAGGGATTTTTTGATTTTTGG
TACAAAGGTGCAAAATGGTGGTGGCCAAAATGTGACGGAGCCCAATTTTT
GAAAAAAAAATTTTGGGCAAAATTTGGGCCAAAAAACAGCTAAAAATCGT
TCTTTTTGGACTTTGTGAAAAACTGATTTTTTGCATGAAAGTAGGGTACC
AGCATAGGTAAAAGATGGCTCAAGCTGATTTTTGCAAAAAAAAATTTGTT
GGCTCAAAAAACGCATGTTCATCTATAAGAATCACTATTAATATAAGCAT
AAATCAATGTTCTCAGTCAAATTACTCAATTTTTTTATGAGATAGATGTT
TTTTTTTGCTTATGAGGGCTTACTTTTGAAGAATATGTGTGTTTAGACAT
GAAATTTTGGTTGCTTGGTGTGTTTTTATAGAAAACTGGCCAAATTCAAT
ATTTTTCTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAG
ATTGGCTCTTTCATTCTTTATAATTTTTTGCACAAAGATGCATAACTATA
AACCCTCAAATGTGACGGAGTCCGATTTTCAAAAAACAAATGTTTTTGGG
CAACTTTGGGCCAAAAAACAGCTAAAAAACGGGGTTTTTTTGGGCTTTGT
GAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCTTGAAAGTAGGTAA
AAGATGGCTCAAGCAGATTTTTGTAAAAAAAGAATTTTTCAGCTCAAAAA
ATGCATCTTTATCTATAAGAATCACTATNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTCTTG
AATATGAAAGAATATTTCAAGAGCATGAAATTTTTGTTTCTAAACGTTTT
TTTATAAGAAACAAACTACTAATTTTAATAGATCGTCACTATTTGTGTTC
TGAATGATTGTTTAACGGTCATGCTCACGTATATATCAATTATATATGTG
TTAAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTGTTTATCAGATCTGTGATGGCACTGAAGAACCAATAGCAGAATTATTC
AAATCTGTGTCTTGGGAAGACATCAAAGCGACAGTAGAAAAAGTTGTGGA
AAAATGTCATTGGAAACAGCATATTAAATGGTTGGATATCGCTTCCAAAA
GTGGAATAAATGAAATCGCTGATATAGTCATTTGTATTGCGTTATATAAT
CTCGAAAATTCTGACGATATTCCAAAGCGAGGTTTATGGGTCAAAATCTT
CGTGCAAATATTCAATAATGATCGTCTATTTGAAAGTTGGTTCGACTCTC
TTTTAAAATGTGAAGATATTACAAAAGATATGGAACTAACTGGGAAACTG
TGTGAATTTATCCCGTCTAGACACCATTCGCTCCCCTTTCTAATGAAATG
TTTTGTTGAGAATGTATATGAACAAGGATATTTGGGTCTCACCGATAAAG
ACACCAAAGATTTTTGCAATACTGTTTTGATCCTTGTTAATAACTATGAT
CGATCCAAGCAGGAATTAACCGATTTGTGTGATTGTCTACTGGTTAATGA
TAACCATGAAGTTGTTGCAAAAATATTGGTCAATTTATGCAAGAGATCAA
GCAAAATATCTGATGCAGAAGCTTTTGAGATGATGTTTGATAAATATTTG
AACGATGTGGATCCTAATGATATGTTTTATAACGAAATCGAACATTGTGC
TGAAATATTTTTAAGCACAAAGTTTTCAAATGATATTGAATGGACAAAAA
GGTTTCTTGAAATCTGTAAAGGAGTCAACGATTTAGATTTCCTTTGTTAC
AGTATTCAAGCAACAATAGATCTTCTATCAGTCAACAAAAAATCTGAAAT
ATTTTTACAGGTTTTTGTAAAGATTTTTGAGGATTTCCTTAACAAATTAA
GTACGATAGACAACGACTACTTAAATGGGTTAATTTTTAGCCTATTTAGA
GCCGAGGGAGAGGTGTTATCGAATTTGTTGAAAGATTTGTTATCGAATGA
AATAGTCATGGAAGCACATGAAGTTATAGAAGTAACATTGTCAGATCTTT
GTTTAGAAGATAACCGCTATAAATTGAGAAAACTGAAAGCCAACAAGAAT
TTTCAAACCCTCTTTTTGAATTACATGAAATTGCTACCCGACTACATGGA
CATGGATAAATGCGAAAATGCAGTGGTGTTCTTAGTCAAAAATGACGACT
GGGAACATTCTATCGAGCTTTTGAATTTATTTCTTGATTTAGAGATGATC
AAAAATNTTACCCGACGACATGGACATGGATAAATGTGAAAATGCAGTGG
TGTTCTTAGTCAAAAATGATGACTGGGAACATTCTATCGAACTTTTGAAT
TTATTTCTTGATTTAGAGATGATCAAAAATAACTTTCGAAATTGTTATCA
ATGTTTGTCTCAGATGAAACCACAAAACACTCAGAACTACAAATTACTGT
TGAAGACTGTTATTCATTCTTTGAAAATCTTTATTGAAGGAATATGTGAT
GTGAACAAAGAAATCTTTGATCCGACCTACCACAACATTCTTAAAGTTGT
CCGTATTATCTTTAAGAATGGATGCTTTTCAGATTTGATTCCAAGTGTTA
TCGCTGTCCTTAAGTATGGAATGGATCATATTATGTACAAAGAAAAAAGT
ATTTTACAAATGCTACTGCACAATTTGAAAAATGAATTTGGAAGTAAAGA
CTTCTATGCAGACATGATGCTAATACGTGCTCTTAATTTGATTGAATTAC
ATAATAAAGTTGGTCCTCCAAAATTTACATGGAGACAATCAGGATCGATT
CCTAGGCATAGTAGAGTTGTTCGATTTCTCCGGAAAGATGATGAAGAAAT
ATATGTTTACAATCGATTCGAGAACATTAGTGAAGCCAGAGAATGGATTG
ACAGGCATGCAGGTGTAAAGCTATCTGGTGGATACAGTTTCACAGCAGTT
GCTCGAACACATGCTGGAAATGTAGAAGTTATCATTCAAAAAGGTCGTGA
AATCTATCAGATGAAAAAGAATGAGTATTTTGAGAAACAGAAAGAAATTG
AAAGATTAAAAAGGAAGTTGAAACGATTTCCGACGAAATTTTCGAAATTA
TCAGACTTCAAGAGACCTCTGGTATCATCTGCAAATGAGACATAAAGTTT
CTACAAAAACACACATAATTCAACCATATATTTTTTAGGGCACTTATTCT
ATATTTGTTGTTGTAAAGCTCAATTTGAATTCAGTTTCGGAAACTCCGGC
GAAACAGTGATTTTTCATTGAGTCTTTTTACCCTTTTTGTTTTCTAGTAG
AGGTTTTTCTTAGTTTGAAAAATATAGCCTTTAGTATTAGGGTTTTTCGA
AGACTTTATTTGTTACACAACCACGGGTAGTGACATTTTAACTCTACTGT
ATAAAAGTTCATAGGAAATCGTTTTCAAGAAAAAGTGCTTTGGGAAATTG
ACTAGAAAATTTTTGTTATGTAAATTCTTATTCTTTATTAATTTGAGAGA
ACTGATTTCGAATCGAGACTAATTTTTAGGAAGATGAAAAACCGTGATAA
TGTATTATTTCTACAGAATATAATAATATAAGATATCAATTTCGTACCCT
CGCACCCTCGCACCCTCCGCACCACAGAGAGTTTCCATGAAAATTAGCTT
CCTTGAGTTGATGTACTTTTAAATTTCCTAGTATTGTTTTTTGTTTTCAT
TTTAACCTGATTCTGATTGAGAAGAAATTTTTAAGATATTGTATACTTTT
GTTGTTACAACTCCCAAAGAAATTGAGATAAAAACTTCACTCGATTTTAA
TTCTAGCTCAAATTCTTGTGACTAAGAAGAATGCCGTACGCTCTGTAGCT
ACGTAAAATCTTTTTCAGACATTAGGTATTCCTTTTAAAAGTTAGACATA
AAATCATTGACCAATTTCTTGTTCATTGTATCTTAGAGTAAAAGCACAAC
TAAAAACATGGATATTGATAATTAATATTGCTGTGAAAGGCGAAGGTGAA
AGGTTGTGTGTAAGTTGATTTCATTTAATTTAATCTTTATTGTATATTTA
TTTTTATTCTTCCACTGCACCTCTTTAGGAAAACATTGTATTTAAAAAAA
CCCAACTTCAAGTATTTTTTGTCAGATTCGAAATCAGTGATCTATTAGAT
TACACGATAACCTCTAATCAAAAGATAAAAGATTGTTAACAGAATCGAAA
AAGCAAACTAATAAGACATTTTTCTCATCCTACAGACAATCAAGAGATGG
ATGGTCGTGAAAATGTTGAAATCGAAAGCGAAAGTGACTGGGATAGTTAT
GAAGATGAAAATCCTTCTGAAAGTGAATTGGACAGTGACGTGGAAATCAA
AAACTCACTTGCCACCTCTGCAGTAAGTTAAAATATAATAAAAAAGGAAC
TCAACTTAATGTACCATTTATTTTGGTTGAACCCTATTCATACTAGGCTT
TTTTTAGGGGCGGCTCACAACTGGGGGGGGGGGGGTTATCTTCCGAAGGA
CTTTTCTGTTCGCCTTGAAATTTATCAAACTTCTTAACCTAAGGTTGAAC
TACCACTGGTGTAAAAATGAACGTTATAGCATAAGTAGAAAAAAAGCTCA
ATTTTTACAATCGCAAATTTAACCGCTAAAAATCGCGAATTTTTCAACCA
AAAATACATTCAAATACAGCGCTTTTAATTATCTAAAACAAGCAAAAAAA
ATTTCCATAATTATATTTGACTATCAAAAGTTAAAGGCATTCTTGTTTCC
ACTGCCAATTATATCTGGATAGACATTAGCATTCTCGTCTCAAATTATAT
TTTTTAAAGACTATTTAAAGAGTTAAGCCGGTCTAGTTGCTTAACAAGAA
TGACTGTATCATTAAGGGTCTCAATTGAGTCAGTTCTTTTCCTGCCTGAA
ACCTTATAAAGTTTCGTTTTTAAAATGGTTTGAATTCATACACATTAAGG
TCTCTTTGTAATCTTGAATTAGAATTTTTAATGGTTTTTACTCTTTTTTG
GTAGGTCCATCAATCAGGAATCCAATACTTTGGATATCTATTGGAAAATG
ATAATTCCAGAATTGAGAAAGGGATTAAATCACTGGTAGGAGTAGATCAA
TTTATTGTAAGAAGTATGGAAAAAGCTAACAAAGAATTACCAGAAGCTGT
ACAATTTTCATTCCACTTGGCAGAATTGACAAGAACTGTCACTGGTGAAA
CGCAAATAAACTCTCAGGAAAAAAGTAGGTCTTTCGTATTTTTCAATTTT
TATCCATTTGGCCAGGATCTAGACGATGCTATCGTCCGTTTAAAGGTCAG
TAAACACGGGAAAGAGTTCGGGCGTCAGGGTGGTTTACGGGGAAAAAGTG
GCGGTAGAGTTTTGGAACAAAACACTGTAAACATTTCCGCCACTGCTTAC
TCCACCCGAATTTATCACGTCTCTCCCGCCCAAACTATTCCCTTTTTTAG
TGATCTTGTGTAGGCGATAGTATAGCCAGGATCATGCTCTAGTCTGAAAG
GAATGTAGAGGACGTGCAAAACATTGAAAACCTCATTTCTTTTTGCCTGT
ACTAAAGGACGTTTGATTTTGGGGCGATTGTTTGCTTTAGCCAATCAATT
TTCGTTTTCAAAAGATCATTTTTAATATTCATCCAAAATGTGGATCAAAA
TGAGCAAAGAGTATGAAACGCCGTAGCTGCCTTATGCGATGAAATATTTG
ATTATGCGATGATTTATTTGATAAACTATTTCGATGCGATAAAAAATTCG
ATGCGATAAATTATGCGATAAAGAATTCGATGCGATAGATTATTTGATAA
AAATTTCGATTGTGTGATAAAATATGCAATAAAAAATTAGATGCTATAAA
TCATTCCATAAAAGAATTGGATTATTCGACAAGAAATTCTATAAAAAATT
TGATGCGATAAATCATTAGATTAAAAATTTGATGCGATTCTCAACTTCAG
TTGAGCTAGAATCTGAGAATGTCTGTGTGTGTGTCTGTGTGTCTGTGTGT
CTGTCACCAAAACTTTGGGGCAGGCTGGAGACTTCNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAATTTTAATTTTTGGG
GCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGC
TGGAGACTTCAAAAATGGTTCGATTTGGTTGAAATTTAGTACACTTGTTC
CTTGGGTGAATATCTGGGGGTGTTTTTTCTCATTTTTTGAAAATTTTCAT
TTTTAAGGGCGTGGTCACGAGGTTTCGCCAAAACGAGGCTAAAACTTTGG
GGCAGGCTGGAGACTTCAAAAATGATCGGGTTTGGTTGAAATTTGGCACA
CTTGTTTCTTGGGTGAATATCTGGGGGTGTTTTTTCTCATTTTTTGAAAA
TTCTCATTTTTAAGGGCGTGGTCACGAGTTTTCGCCAAAACGAGGCTAAA
ACTTTGGGGCATGATGGAGACATCAAAAATGGTTGGATTTAGTTGAAATT
TGGTACACTTGTTCCTTGGGTGAATATCTGGGCGTTTTCTTTTTCATTTT
TTGAAAATTTACATTTTTAACGGCGTGGGCACGAGTTTTCGCCAAAACGA
GGCTAAAACTTTTAGGCAGGCTGGAGACTTCAAGGGCGAATCCCTGTGGG
TGGTTTTCATTTTTTTATAATTTCCATTTTAAGGGGGTGGTCATGAGTTT
TTAGTTGAAATTGGTTACAATCTTACAATTGGGCCTACGAATGATTTAAA
AACACTGAAGTTGAGCCCAGTGCGGTTAGCACGTTCGACAGTAAATTATT
TGAATAAAAATTTATGAGATAGAATATTCGATAAAAATTCAATGCGATAA
AAAATTCGCGATAAACCATTAGATAAATCATTCGATGAATCATCCGATCG
GTTCTACGCAACATTTATACTTTTGGTAGAAACGGCGCCCCAATGTCCAA
TATCATTGGCCCGTATACCGGACCGTCCGCCGACCAGCCCAATGACTCTC
AGTGAGAAAGACTTTCTTTGTCTTGTCTAGTTTTTGCTTTAAAGAAATAA
CTTTTCACTCTATTTTTTTTCAGAGATTAAAGGCACCAGAACAAGCAACA
AAGTAACAAATGCAAACAACCTAGATGGCTCGATGAAATATTTGGAAAGT
TTTCCCATCAATATCAAAGAAAGTTTGTTGGGGAGAAGTGAAACAATTGA
CTGGGGTACACCAAATGAATCACTTATGAAAAAGGTTTATTCAAGATTTA
TTGTTATAGCCATTGCCAAAAAACACTATTTTGAGACACTTTGTTCATCT
TACTCGCCATTACCCTGTATTCAATTTCTCATGGAAGAGCAACAAACTTC
ACATCCTAATTTCAAAAAGCATTTAAGATTATTTTTGAGAGAATATCCAG
CAAATTTGTATGTGGAACACCAATCAGATACTATTATTGTTATTTCAAAT
TTGTTGAAAGAGGCTCAAATGCCTGATTTGACCTTACTTTATTTAAAGCA
GCTCATAATATCGAAAGTTAAGCATAAAGAGGAACTTGTTTATCAGATCT
GTGATGGCACTGAAGAACCAATAGCAGAATTATTCAAATCTGTGTCTTGG
GAAGACATCAAAGCGACAGTAGAAAAAGTTGTGGAAAAATGTCATTGGAA
ACAGCATATTAAATGGTTGGATATCGCTTCCAAAAGTGGAATAAATGAAA
TCGCTGATATAGTCATTTGTATTGCGTTATATAATCTCGAAAATTCTGAC
GATATTCCAAAGCGAGGTTTATGGGTCAAAATCTTCGTGCAAATATTCAA
TAATGATCGTCTATTTGAAAGTTGGTTCGACTCTCTTTTAAAATGTGAAG
ATATTACAAAAGATATGGAACTAACTGGGAAACTGTGTGAATTTATCCCG
TCTAAACACCATTCGCTCCTCTTTCTAATGAAATGTTTTGTTGAGAATGT
ATATGAACAAGGATATTTGGGTCTCACCGATAAAGACACCGAAGATTTTT
GCAATACTGTTTTGATCCTTGTTAATAACTATGATCGATCCAAGCAGGAA
TTAACCGATTTGTGTGATTGTCTACTGGTTAATGATAAC

Coding sequence (CDS) from alignment at scaffold_364:370477..385415-

>TCONS_00062439 ID=TCONS_00062439|Name=TCONS_00062439|organism=Clytia hemisphaerica|type=CDS|length=5856bp|location=Sequence derived from alignment at scaffold_364:370477..385415- (Clytia hemisphaerica)
AGATTAAAGGCACCAGAACAAGCAACAAAGTAACAAATGCAAACAACCTA
GATGGCTCGATGAAATATTTGGAAAGTTTTCCCATCAATATCAAAGAAAG
TTTGTTGGGGAGAAGTGAAACAATTGACTGGGGTACACCAAATGAATCAC
TTATGAAAAAGGTTTATTCAAGATTTATTGTTATAGCCATTGCCAAAAAA
CACTATTTTGAGACACTTTGTTCATCTTACTCGCCATTACCCTGTATTCA
ATTTCTCATGGAAGAGCAACAAACTTCACATCCTAATTTCAAAAAGCATT
TAAGATTATTTTTGAGAGAATATCCAGCAAATTTGTATGTGGAACACCAA
TCAGATACTATTATTGTTATTTCAAATTTGTTGAAAGAGGCTCAAATGCC
TGATTTGACCTTACTTTATTTAAAGCAGCTCATAATATCGAAAGTTAAGC
ATAAAGAGGAACTTGTTTATCAGATCTGTGATGGCACTGAAGAACCAATA
GCAGAATTATTCAAATCTGTGTCTTGGGAAGACATCAAAGCGACAGTAGA
AAAAGTTGTGGAAAAATGTCATTGGAAACAGCATATTAAATGGTTGGATA
TCGCTTCCAAAAGTGGAATAAATGAAATCGCTGATATAGTCATTTGTATT
GCGTTATATAATCTCGAAAATTCTGACGATATTCCAAAGCGAGGTTTATG
GGTCAAAATCTTCGTGCAAATATTCAATAATGATCGTCTATTTGAAAGTT
GGTTCGACTCTCTTTTAAAATGTGAAGATATTACAAAAGATATGGAACTA
ACTGGGAAACTGTGTGAATTTATCCCGTCTAAACACCATTCGCTCCTCTT
TCTAATGAAATGTTTTGTTGAGAATGTATATGAACAAGGATATTTGGGTC
TCACCGATAAAGACACCGAAGATTTTTGCAATACTGTTTTGATCCTTGTT
AATAACTATGATCGATCCAAGCAGGAATTAACCGATTTGTGTGATTGTCT
ACTGGTTAATGATAACGTCCATCAATCAGGAATCCAATACTTTGGATATC
TATTGGAAAATGATAATTCCAGAATTGAGAAAGGGATTAAATCACTGGTA
GGAGTAGATCAATTTATTGTAAGAAGTATGGAAAAAGCTAACAAAGAATT
ACCAGAAGCTGTACAATTTTCATTCCACTTGGCAGAATTGACAAGAACTG
TCACTGGTGAAACGCAAATAAACTCTCAGGAAAAAAATGGATGGATTTGG
GAACTTGTTATCTTCAAATACAAAGAATAATGAAGCCATAGATATTATAA
AAGAAATCCATTCAGCTCTTCTACTGATGTTTGAAGTAGAGATGGATGGT
CATGAAAATGTGGAAATCGAAAGTGAAAGTGACTGGGATAGCGAGGGTGA
AAATCCTTCTGAAAGTGAATTGGACAGTGACGTCGAAATCAAAAACTCAC
TTGCCACCTCTGCAAGATTAAAGGCACCAGAACAAGCAACAAAGTAACAA
ATGCAAACAACCTAGATGGCTCGATGAAATATTTGGAAAGTTTTCCCATC
AATATCAAAGAAAGTTTGTTGGGGAGAAGTGAAACAATTGACTGGGGTAC
ACCAAATGAATCACTTATGAAAAAGGTTTATTCAAGATTTATTGTTATAG
CCATTGCCAAAAAACACTATTTTGAGACACTTTGTTCATCTTACTCGCCA
TTACCCTGTATTCAATTTCTCATGGAAGAGCAACAAACTTCACATCCTAA
TTTCAAAAAGCATTTAAGATTATTTTTGAGAGAATATCCAGCAAATTTGT
ATGTGGAACACCAATCAGATACTATTATTGTTATTTCAAATTTGTTGAAA
GAGGCTCAAATGCCTGATTTGACCTTACTTTATTTAAAGCAGCTCATAAT
ATCGAAAGTTAAGCATAAAGAGGAACTTGTTTATCAGATCTGTGATGGCA
CTGAAGAACCAATAGCAGAATTATTCAAATCTGTGTCTTGGGAAGACATC
AAAGCGACAGTAGAAAAAGTTGTGGAAAAATGTCATTGGAAACAGCATAT
TAAATGGTTGGATATCGCTTCCAAAAGTGGAATAAATGAAATCGCTGATA
TAGTCATTTGTATTGCGTTATATAATCTCGAAAATTCTGACGATATTCCA
AAGCGAGGTTTATGGGTCAAAATCTTCGTGCAAATATTCAATAATGATCG
TCTATTTGAAAGTTGGTTCGACTCTCTTTTAAAATGTGAAGATATTACAA
AAGATATGGAACTAACTGGGAAACTGTGTGAATTTATCCCGTCTAAACAC
CATTCGCTCCTCTTTCTAATGAAATGTTTTGTTGAGAATGTATATGAACA
AGGATATTTGGGTCTCACCGATAAAGACACCGAAGATTTTTGCAATACTG
TTTTGATCCTTGTTAATAACTATGATCGATCCAAGCAGGAATTAACCGAT
TTGTGTGATTGTCTACTGGTTAATGATAACGTCCATCAATCAGGAATCCA
ATACTTTGGATATCTATTGGAAAATGATAATTCCAGAATTGAGAAAGGGA
TTAAATCACTGGTAGGAGTAGATCAATTTATTGTAAGAAGTATGGAAAAA
GCTAACAAAGAATTACCAGAAGCTGTACAATTTTCATTCCACTTGGCAGA
ATTGACAAGAACTGTCACTGGTGAAACGCAAATAAACTCTCAGGAAAAAA
ATGGATGGATTTGGGAACTTGTTATCTTCAAATACAAAGAATAATGAAGC
CATAGATATTATAAAAGAAATCCATTCAGCTCTTCTACTGATGTTTGAAG
TAGAGATGGATGGTCATGAAAATGTGGAAATCGAAAGTGAAAGTGACTGG
GATAGCGAGGGTGAAAATCCTTCTGAAAGTGAATTGGACAGTGACGTCGA
AATCAAAAACTCACTTGCCACCTCTGCAAGATTAAAGGCACCAGAACAAG
CAACAAAGTAACAAATGCAAACAACCTAGATGGCTCGATGAAATATTTGG
AAAGTTTTCCCATCAATATCAAAGAAAGTTTGTTGGGGAGAAGTGAAACA
ATTGACTGGGGTACACCAAATGAATCACTTATGAAAAAGGTTTATTCAAG
ATTTATTGTTATAGCCATTGCCAAAAAACACTATTTTGAGACACTTTGTT
CATCTTACTCGCCATTACCCTGTATTCAATTTCTCATGGAAGAGCAACAA
ACTTCACATCCTAATTTCAAAAAGCATTTAAGATTATTTTTGAGAGAATA
TCCAGCAAATTTGTATGTGGAACACCAATCAGATACTATTATTGTTATTT
CAAATTTGTTGAAAGAGGCTCAAATGCCTGATTTGACCTTACTTTATTTA
AAGCAGCTCATAATATCGAAAGTTAAGCATAAAGAGGAACTTGTTTATCA
GATCTGTGATGGCACTGAAGAACCAATAGCAGAATTATTCAAATCTGTGT
CTTGGGAAGACATCAAAGCGACAGTAGAAAAAGTTGTGGAAAAATGTCAT
TGGAAACAGCATATTAAATGGTTGGATATCGCTTCCAAAAGTGGAATAAA
TGAAATCGCTGATATAGTCATTTGTATTGCGTTATATAATCTCGAAAATT
CTGACGATATTCCAAAGCGAGGTTTATGGGTCAAAATCTTCGTGCAAATA
TTCAATAATGATCGTCTATTTGAAAGTTGGTTCGACTCTCTTTTAAAATG
TGAAGATATTACAAAAGATATGGAACTAACTGGGAAACTGTGTGAATTTA
TCCCGTCTAAACACCATTCGCTCCTCTTTCTAATGAAATGTTTTGTTGAG
AATGTATATGAACAAGGATATTTGGGTCTCACCGATAAAGACACCGAAGA
TTTTTGCAATACTGTTTTGATCCTTGTTAATAACTATGATCGATCCAAGC
AGGAATTAACCGATTTGTGTGATTGTCTACTGGTTAATGATAACGTCCAT
CAATCAGGAATCCAATACTTTGGATATCTATTGGAAAATGATAATTCCAG
AATTGAGAAAGGGATTAAATCACTGGTAGGAGTAGATCAATTTATTGTAA
GAAGTATGGAAAAAGCTAACAAAGAATTACCAGAAGCTGTACAATTTTCA
TTCCACTTGGCAGAATTGACAAGAACTGTCACTGGTGAAACGCAAATAAA
CTCTCAGGAAAAAAATGGATGGATTTGGGAACTTGTTATCTTCAAATACA
AAGAATAATGAAGCCATAGATATTATAAAAGAAATCCATTCAGCTCTTCT
ACTGATGTTTGAAGTAGAGATGGATGGTCATGAAAATGTGGAAATCGAAA
GTGAAAGTGACTGGGATAGCGAGGGTGAAAATCCTTCTGAAAGTGAATTG
GACAGTGACGTCGAAATCAAAAACTCACTTGCCACCTCTGCAAGATTAAA
GGCACCAGAACAAGCAACAAAGTAACAAATGCAAACAACCTAGATGGCTC
GATGAAATATTTGGAAAGTTTTCCCATCAATATCAAAGAAAGTTTGTTGG
GGAGAAGTGAAACAATTGACTGGGGTACACCAAATGAATCACTTATGAAA
AAGGTTTATTCAAGATTTATTGTTATAGCCATTGCCAAAAAACACTATTT
TGAGACACTTTGTTCATCTTACTCGCCATTACCCTGTATTCAATTTCTCA
TGGAAGAGCAACAAACTTCACATCCTAATTTCAAAAAGCATTTAAGATTA
TTTTTGAGAGAATATCCAGCAAATTTGTATGTGGAACACCAATCAGATAC
TATTATTGTTATTTCAAATTTGTTGAAAGAGGCTCAAATGCCTGATTTGA
CCTTACTTTATTTAAAGCAGCTCATAATATCGAAAGTTAAGCATAAAGAG
GAACTTGTTTATCAGATCTGTGATGGCACTGAAGAACCAATAGCAGAATT
ATTCAAATCTGTGTCTTGGGAAGACATCAAAGCGACAGTAGAAAAAGTTG
TGGAAAAATGTCATTGGAAACAGCATATTAAATGGTTGGATATCGCTTCC
AAAAGTGGAATAAATGAAATCGCTGATATAGTCATTTGTATTGCGTTATA
TAATCTCGAAAATTCTGACGATATTCCAAAGCGAGGTTTATGGGTCAAAA
TCTTCGTGCAAATATTCAATAATGATCGTCTATTTGAAAGTTGGTTCGAC
TCTCTTTTAAAATGTGAAGATATTACAAAAGATATGGAACTAACTGGGAA
ACTGTGTGAATTTATCCCGTCTAAACACCATTCGCTCCTCTTTCTAATGA
AATGTTTTGTTGAGAATGTATATGAACAAGGATATTTGGGTCTCACCGAT
AAAGACACCGAAGATTTTTGCAATACTGTTTTGATCCTTGTTAATAACTA
TGATCGATCCAAGCAGGAATTAACCGATTTGTGTGATTGTCTACTGGTTA
ATGATAACGTCCATCAATCAGGAATCCAATACTTTGGATATCTATTGGAA
AATGATAATTCCAGAATTGAGAAAGGGATTAAATCACTGGTAGGAGTAGA
TCAATTTATTGTAAGAAGTATGGAAAAAGCTAACAAAGAATTACCAGAAG
CTGTACAATTTTCATTCCACTTGGCAGAATTGACAAGAACTGTCACTGGT
GAAACGCAAATAAACTCTCAGGAAAAAAATGGATGGATTTGGGAACTTGT
TATCTTCAAATACAAAGAATAATGAAGCCATAGATATTATAAAAGAAATC
CATTCAGCTCTTCTACTGATGTTTGAAGTAGAGATGGATGGTCATGAAAA
TGTGGAAATCGAAAGTGAAAGTGACTGGGATAGCGAGGGTGAAAATCCTT
CTGAAAGTGAATTGGACAGTGACGTCGAAATCAAAAACTCACTTGCCACC
TCTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039109XLOC_039109Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062439-exon-scaffold_364-1575043694:385144..385415TCONS_00062439-exon-scaffold_364-1575043694:385144..385415Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1575043694:380875..381025TCONS_00062439-exon-scaffold_364-1575043694:380875..381025Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1575043694:380631..380720TCONS_00062439-exon-scaffold_364-1575043694:380631..380720Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1575043694:373992..374211TCONS_00062439-exon-scaffold_364-1575043694:373992..374211Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1575043694:370477..371492TCONS_00062439-exon-scaffold_364-1575043694:370477..371492Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1510915933:385144..385415TCONS_00062439-exon-scaffold_364-1510915933:385144..385415Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1510915933:380875..381025TCONS_00062439-exon-scaffold_364-1510915933:380875..381025Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1510915933:380631..380720TCONS_00062439-exon-scaffold_364-1510915933:380631..380720Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1510915933:373992..374211TCONS_00062439-exon-scaffold_364-1510915933:373992..374211Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1510915933:370477..371492TCONS_00062439-exon-scaffold_364-1510915933:370477..371492Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1491911889:385144..385415TCONS_00062439-exon-scaffold_364-1491911889:385144..385415Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1491911889:380875..381025TCONS_00062439-exon-scaffold_364-1491911889:380875..381025Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1491911889:380631..380720TCONS_00062439-exon-scaffold_364-1491911889:380631..380720Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1491911889:373992..374211TCONS_00062439-exon-scaffold_364-1491911889:373992..374211Clytia hemisphaericaexon
TCONS_00062439-exon-scaffold_364-1491911889:370477..371492TCONS_00062439-exon-scaffold_364-1491911889:370477..371492Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062439-proteinTCONS_00062439-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:370477..385415 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.367421	0	0	0	1.84879	1.20581	1.90679	2.17947	1.14124	1.21196	1.76051	1.36075	1.37591	1.42515	1.6045	1.79007	1.64982	1.69102	0.807754	0.956156	0.91067	0.888386	0.719966	0.327277	1.41698	1.76834	0.861009	0.459446	0.348474	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062439 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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