TCONS_00062424 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062424
Unique NameTCONS_00062424
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3713

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062424 ID=TCONS_00062424|Name=TCONS_00062424|organism=Clytia hemisphaerica|type=transcript|length=3713bp
TAACATTCAAAGGTTGCATACTGGTTCGACGTTCGTTAATGGAAGAAGAA
GAATGGATGTTTTTGAAGTGTGCAGTGGTCGTCGATAGATCGTTCTTCGA
AACAATCGGTCAAAACAATACAAGGGATACCAAACGGGTCGTGGCTGATC
TTGTTGATCATTTAAGTGAGGTCTTCAAATCGTTGAAGATTCGTTTCGCA
TTAGTTTCTATGGAAACAAATTCAGTCTTGAATGTGACAACGTCGGCTGG
TGAAACTTTGAGGAGATTCAAGAAGTATAATTTGGATGTTTTATTACGTA
ATCGTAGGGGAGAACACGATATTGCATTGCTTTTGACTAATAAAGGCTTT
GGTGGCTTGGCAGGTTTAGCGAACGTTGGTGGTCTATGTACTGAGAGTGC
AGCATCTGTTGTCACGTGGTCAGGCAACGTTGAAATGACAGCAAGTGTTA
TAGCGCATGAAATGGGACATAATTTTGGCTTCTTACACACAGGCCGTGGC
TGTACGTGTAGTGATGGACCCTGTGCCATGGACTCCTCAATCAGCAACCC
TACAAATGAGTTTTCCAGCTGTGACCAGCAAGAATTTTTGGGATACATCG
AAAAATCTCGATTTCCGTGTTTACTTGATGTTCCTCAGGAGATAGCAACA
GATGCGATTTGTGGCAATGGTTTGGTGGAAGAGACAGAAGAATGTGACTG
TGGAACTAAAGAGGAATGTGCAGATCCTTGTTGTGATGCAGAGACATGCA
AATTGAAACCTCATGCTGAATGTAGTTCTGAAGAGTGTTGTCATGATTGC
AAGTTGAAGAAGAAAGGTAGTCTATGCCGCGATATCCAAAACGATTGTGA
TTTACAAGATTTTTGTGATGGGAAAAGCTCAAAGTGCACCAAGAATTCAT
ACAAGGAAGATTATACCCTTTGTAACCAGGGTAACAGTTTTTGCTTACAT
GGAGCTTGCGCAATGTCGTACGATAGCCAATGTCAAGTTTTTTGGGGCAA
AAATGCATTGAAGGGTCATGATATTTGTTACAAGAATTTGAACACTCGTG
GAGACACCTTTGGGAATTGTGGAATGGATGATCAAGACAATTACATTAAA
TGTGAACTCGAAGATACATTATGCGGTTACTTGCAATGTACTGGCGAAAA
TTTACCTATCTTTCCAATCATTGGTTCAAACAGAAAAGCATCTGTGTTTT
CCTTTACTTCTGAAAACACACGCATCACTTGCAGGGCAGGCTCCACCTAC
CTTGGTTTTGACGTCAAAGATGCAACTCTGGTCGCTTCTGGAACGAAATG
CGGAGAAGGAAAGGTGTGTCATGAGAAGCGTTGTATCAATGTTACAGACC
TTCAACAATCGAAGTGCGTTTCAAAATGTCCACCTGACAAAGTGTGTAGC
AACGAAGGAGTGTGTCGGTGTTTGTACAGTTTGGACAATGTAACGTGTAT
CAACCCTCCTCCCCTGCAACGAAAAGCTGTTGAAGGAGAAATTAAAGATG
ATTCAAACAGCAACACTTTGATCGGTGTTTTAGTCACCCTGATAATCCTC
CTCCTCTTGTTGATTGTCATTTTGTTCTTCAAAAGGAAATCAATACAAGC
CTTCTTATTGAGACGAAAGTTGAGTTGCGCAAGCTCAGCAATAACCGCGT
TAGCTGATTCCAATAACAACCAATCAGCGTCTACCATTGTCGATATGGAC
CAATCAGATGCTTCGTTCAAAGAAAAACCATCCCTGACTAATAAGCGGAA
GATCAGTTTCGCTTCCAAGTTGTTTGTTGAAATCAGTTCCGTAAGCAGTG
GTTTCCGAAATCCTTTGAAGTCTATTGATGTTACCAAAAGGTTGAACGAA
CTTGGTAAAGAATCAATGGTTGACGATCCTACTGTTTCTGGTAATGTTGG
TAAAGCACCAAAAGTACATTGCGATTCTCTTACAGATACTGAAAATATGC
CCAAAAATCTCGAGCAAAGTGGAAATGAAGTAAGCTCACTTGTTAAATCT
GCTAATCCTATCCTTGTTAGAGAATCTAGCGTTGATCAAGATCCAGAGAG
AAAGAAATTACAAGTTGATCAAGCATTGGAAATCACTAGCCTTTATGGCT
TGGAAATGGACCTTACTCCTAAACTAAAGAAACATCCTAATAAACTGACA
CCAATTAAAAGACCTtccaaaataaagaagaaaaaatcctcAAGTAAAAC
CAAAAGGGTTTccactgaaaagaaaaaaaagaattctgaaaatcacgaag
aaaaaattcaaagaatcaGTGATGTTTTTTCCGAAAATGAcgatgttttt
gaagaaaatcagGACAAAGGATCTCCGAACGAAGACATTCAACCGAGTAT
CGTGGTTCCTGAAAGTAAACCTCGAAAGCGAGGAGAAACTGTATCGGACA
CTAACCTAGAAATGAAAGCAAGAAATTATTCAATAAAATCATCTGAAGTT
GTTAAACAGCGTCCAAGAAGCAAAACTACTATGTTAGACGTGTCTCCGAA
CAACGAATCGAAAGGAGCTAACCCTGTTACCAAGGTTACCGGCAGGCGTC
AACGACAATCAACCGTTCAACCACCAACTTTTACCGATACAAACCAGAAA
GTTGGTAGCCTTAGTCAAATCAAGATCTCGCCGCGTAAAATCAGTACTGC
GAGTACCACATTTGAACAACAATCCATGAAAACAAAAGGTCGTAAAATCA
GTCGTGTTAGTCCTTCGGCGTATTCTCCATCAAGTTCTCCGAATCGACCG
CGAAGTAAAACAATGTCAACATCAGCTTCCCGTCAATCCGCACGCATGCG
TAGTGGGACTGAAACGGATCGATCGGATACAAAAGTTCTAAACGACCACC
CACGTCGCAAATTAGCATTCAATTCAAATTACAGCCGCGAAAACACGCTC
CTCGTCAAAGAAGCAACCACAGGCGAAGATGCTGTATTCGCTGGTGATAT
TAACTATAATAAAGCGAACTCTCTCTTGGTTAGAGACACGACCACAACAA
AGAGATCAGTGACAATTGTTCTCGATGATGAAGACACTGATCTCAATCAT
TTCTCTAGATACAGAAAACCAAGCTCGACAAACCCGCCAAATGagttaaa
agttgaaaataaaacaaatatcaGGAAAATTTCGACTGTTCAGAAAGGAA
GACGTTAAGAAATAAACTCTTGACTTATTCACACAACTACTGCTTGGGCT
AAACAATGAGTTTCCGTATAATTTATTCGATTAAATAAATATATTCCTAA
AGAATAAAGTAAAATTTGTAATATTTCCAAGAAACATTTTTCGGAAACAG
ATTACAaatgtaatcgtcagccgtgcaaaattactcgaatctgattggtt
tagaggagtgcgattaatcgttaattgcactattaccactttttgcactc
ttcggctaaaaaaaactatgatttactaatgattatttactgacaattac
ctcggaatcgtatgtttttaCTGAAAATCAGTTAATTGCACCATCGAATT
ATTATCAGATAGAATGAAttcatgcttttttcctcaaaatgaagcGTGTC
TGTAAGGGGTCCCTTAGTTGCAATGGGAATTCAATTGCACGTGTGTAATG
ATAAtgtcatttctttgttcttatcgtaatttaattgcatattttctcat
acttgattggattcttttgaattctcaaaaaattatgcacataatttgat
tattttcaactgg
Run BLAST on NCBI

transcript from alignment at scaffold_364:287873..298397-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062424 ID=TCONS_00062424|Name=TCONS_00062424|organism=Clytia hemisphaerica|type=transcript|length=10525bp|location=Sequence derived from alignment at scaffold_364:287873..298397- (Clytia hemisphaerica)
TAACATTCAAAGGTTGCATACTGGTAAGGTTTATCAAAACAAATCACATG
CAATAAACTGATTATAACAATTTGAATACAAATTAAATATTATCTTAATT
TCCATATTTTCCACACTGGGTTGATGTTTCTTTTCAGGTTCGACGTTCGT
TAATGGAAGAAGAAGAATGGATGTTTTTGAAGTGTGCAGTGGTCGTCGAT
AGATCGTTCGTAAGTTTTGTCTGAATGAAAAGTTCTTTCTAAATGTAGTA
GTTGTTGGGAAATTTCTGCCTCAGCCAGTTACAAATGTAAATCCCCAATG
TTTTTGCTTCTTTGTGTGACCTCCATCTTTATGAATATGATTTTCCTAGA
CTATACCCGCCGTAAAAAGCTACACCCTTGAACAGCTTTCATTCTACTAA
AGCATGGGGTATGGCTAGTGGTATAGCTGTTTTTCATGCTTGGTTTAGTT
ATATTATTGTCATTGTTGAAGCAAACATTCGATGTACGTAAGATCACCTC
TACAGATTCGAACGTTTGCTTCCATAATAATGATGGAAATCGCATAACTT
AACATAACATAAAAACCTCTGAGGCTAATTTCAAAAACCACCATGAACAC
ACAATATTATCTAACGAATGAAAAGAGTTTTTTTGTCTCATTTTCCAAAG
ATCCTGTTTTGCTCTGGTCTTTATAGTACCAGATTATTATCTTCCATTCA
TTTTTCAGTTCGAAACAATCGGTCAAAACAATACAAGGGATACCAAACGG
GTCGTGGCTGATCTTGTTGATCATTTAAGTGAGGTAAGATTCAACAATCA
GGATCCTAGACCATGTGACTATGACTTGCACACTACATGACTTGCACTAC
AGAATGTTGAAAATTAAATGTTGAGTACTACTTGAACTTCGCCATAATCC
CCGACTAGAAGGTATCAAGTTAACAAGATATATGAAGGATAAAATCAGGT
GCAGAGCATAAATGGGGAGGGATTTCTTTTCTGAGAATAAGGAGAATTGA
AATTGCCCAATCATATATCTTTTCGCTTGGATTCTTCGTCTCATTTTTTC
TTAATTTAATACTTTAAGGTCTTCAAATCGTTGAAGATTCGTTTCGCATT
AGTTTCTATGGAAACAAATTCAGTCTTGAATGTGACAACGTCGGCTGGTG
AAACTTTGAGGAGATTCAAGAAGTATAATTTGGATGTTTTATTACGTAAT
CGTAGGGGAGAACACGATATTGCATTGCTTTTGACGTACGTAAAATTACT
CGTAGCGTAGTTTATGGGTGGGGTTAATGGGTGTTGAAAATAAGGAATCG
CGTGGAGGGGGGGTCGATGAAATTCATAGTGAAAATGTGAGTGGATTCAC
GGCTGAAAAACTGCAATATTTGAAAAAGTTCAGCTGTAAATTATTGACTG
TAACTTTTCACAGTGAGTTATCGCCGTGTAATCAGAGATTTTTCCGGGGA
TGATTTCAAGGTAACTTCTGTTTAACACCCCTCGGGTAAGTTATGGCATG
TCTCAAAAACTGAAAATTACCATAATTTTTAGATCGCATTAGTCGACAGA
AAATGAACAAACAAATGACTGAACATGAAGGGTACTATGATGTAGTTTCT
AACCTGATGTGTAAACTAATTGTTATTTCGCTGATTTTCGCAAAAAAACA
CAAAAACTGATTATGACGCCATAATCGATGACGTCATAGAAACTAAAAAT
TGAATTTCTCAAGAATGGTTTATCCAATTGTCTTCAAACTTTCACCAAAG
ATGTATCTCACTAAATTTAATTATTTGAAAACAAATTTTTTTTGAAATTT
TGATGACGTCAGCAGAAATTTATAAAAAACGAAAAATGGTATTTTTTGCT
GACGTAATCAGAATTTTGAAAAAACTATTTTTTCAAATGATTAACTTTAG
TGAGATACATCTTTGGTGTAAGTTTGAAGATAATTAGATAAACCATTCTT
GAGAAATTCAATTTTTAGTTTTTATGACGTCATCGATTATGACGTCATAA
TCAGTTTTTGCGGATTTTCGCAAAAATTAGCGAAAAAACAATTAGGTTAC
ACATCAGGTTAGAAACTACATCATAGTACCCTTCATGTTCAGTCGTTTGT
TTGGTCGTTTTCTGTCGGCTAATGCGATCTAAAAATTATGGCAATTTTAG
GACATGCCATAACTTANTCTGTCGGCTAATGCGATCTAAAAATTATGGCA
ATTTTAGGACATGCCATAACTTACCTGAGCCACAGCGTTCATATAACAAA
ATCAGGTCAACGTAACCATTTAATAATTCTATCCTCATTTCTCAGTAATA
AAGGCTTTGGTGGCTTGGCAGGTTTAGCGAACGTTGGTGGTCTATGTACT
GAGAGTGCAGCATCTGTTGTCACGGTAAGTTTTTTGATCTCTTCATCAAT
TAAATTGTTTATCATATTTTATTTTTCTACCCTTATCCAGTAAAATGCAA
TCAAATCTTCGATGCTTTAGGGCCTCGCTAGCTAGCCTATTTTCGTNGTA
AAATGCAATCAAATCTCCGATGCTTTAGGGCCTCGCTAGCTAGCCTATTT
TCGTATATTTTGTGACTTTTAGCGTAAAATCCATTGATGGGTTTTGCTGA
TATGATATTGAAAGCATTAATATGAGTTCGTTATAATCTATCTTCGTGAC
GCTGTAAAAAATTATGATTTTTACGTTTTAGTGGTCAGGCAACGTTGAAA
TGACAGCAAGTGTTATAGCGCATGAAATGGGACATAATTTTGGCTTCTTA
CACACAGGTGAATTGATATGATATTTTCGGTGAAGCTACTAGAATTTCGA
AAGTGTTGATGAGTCATGTCACTAAGCCTTCCCTTTTTTTACGTTGGAAA
AAATTTAAATGGGACACTAAAACACACGTGTCAGACATTGAATTTTTTTG
TCACACATTTGTAATCTCTTTCTTCCTACGATATCAATTCAACCTTCTCT
TTTGTTCAACTAACATCTCTAGGCCGTGGCTGTACGTGTAGTGATGGACC
CTGTGCCATGGACTCCTCAATCAGGTGGGTAGACGAACTTGGTGCGTCTT
CTTATTTTGCCTTTATTCGTGCTCATTAGAATCTTACGTTTCAATGAAAG
TAAGTCAGACTGTCACCTGGGGTGATTATCGATGTGAGAGATGACCTCCT
TACGTAGGCTGCTAGCATCCACTAACGGATTCGTGCTTCTATACTACCTG
GAGTTTTGTAGAGGTCTGCGATTCAGACTACTCGCTACGTGGTCGATTTT
TTATGGGAACCCACAACCTTCCGGTGTGCGCACTCGACTGCGCCTCTCTT
TTAAAAGGAAAAAAATGTATCAAATAATTTTGGAGCGTTGTTGCTAGTTA
TACATTATGTGGAAAATTTTTTCTTGAGCATCTTCTGAGGAGGAAATAAA
GAATAAAATGAAATGAAATATCTTGACTTATTAAACTATTTTCAGCAACC
CTACAAATGAGTTTTCCAGCTGTGACCAGCAAGAATTTTTGGGATACATC
GAAAAATCTCGATTTCCGTGTTTACTTGATGTTCCTCAGGAGGTTCGTAT
ATGTAATTAATCATGGTTACACAATTTCTCATCTAACAAACCAGAAATAA
TTTATTAATTTAAATCTAGGTACTCCTTGTTGCTCTTAAATTGAGACAGA
TTGATACAGAGATTGTCGTGTGAGTAAGTAACAGCTAACAACAGGCATGT
GACTCAAGTAGAACTAAATTTTGTTCGATTTATGGAGAAATTCGATAAAT
AGAGACTTGAAGGGTTTAGAAAACTCGTTAGAGTTAAGGAGACAGTCAAA
CTAATAAAGTTCAAGGAGACTCTCCTGTATTAACTATAAATTATGATTGT
TTATAACAGATAGCAACAGATGCGATTTGTGGCAATGGTTTGGTGGAAGA
GACAGAAGAATGTGACTGTGGAACTAAAGAGGTGCGTGATTCTTTCAGTC
TAAAGAGAGTACATAACATAATCTGCTCAAGCTAAACATAATGATATATG
TACCCTCTATCTTCGATTCATTGAATAGTACAGTGATCGAGACATGCGCG
ATAAAATTCTTATAGTCTGTCTCTACAGGTTAATTTCAGAGAAAGCTAAT
CTGTGATGCTCGTGGTAAATATTTTTTAGCTTACCTATTTCTACTATTTG
GCAACCTCCTCCAATATTAGGCTTACTTAACAACCATAATTTGACATTGA
AGGGGAACTCAACATTTTTTAGGTCGTGCTCCAAGCAAGTACTACACAAT
ATAGCATAACTTCGAAAGACATAGACAATATAGTCGAATTTTATCCTATA
CATTCTGAGTGAATTTTGTACCATTCAAGTATTCAGTTTTCTTTAGGAAT
GTGCAGATCCTTGTTGTGATGCAGAGACATGCAAATTGAAACCTCATGCT
GAATGTAGTTCTGAAGAGTGTTGTCATGATTGCAAGGTATGAAGAGTGAT
GTTACAGTTTAGTAAATTGTAGAAATAAACACCTACTTCCTTGTAAGATT
AATTATTGAGTGATGGTCGTATTATCCGAGGTGATGGCATTGTTAACCAT
TTCTAGCAAGGCATACCTTGAGAATCGCTAAAGTAACTAGCCTATTTTTC
ATAAATCACTTTGTTTATACGTATCTTTTTCAGTTGAAGAAGAAAGGTAG
TCTATGCCGCGATATCCAAAACGATTGTGATTTACAAGATTTTTGTGATG
GGAAAAGCTCAAAGGTGGGGTGTTTTTATCCGAAGAAAACGCAGTTTGTT
CATTGGAACATATATTTAATCCAGTCGAAAATTTAGTCTGTCAATTGCAC
CAGCATACTCCGGAACATCTTTTTAGAACAACAAAATCATGAAGAATTAC
GATACAACAAATTTGTGTGGTTGTTTCGTTATGAGATGCAAATTTTTGAA
TTTTTGAATTTTTGAAACGGTTTCACAATTTCAGTGCACCAAGAATTCAT
ACAAGGAAGATTATACCCTTTGTAACCAGGGTAACGTAAGTCTTTGAGCC
TTTAGTTTCTAACAAATTTCACTAATTACATTGGAATTCTAAACTGGAAA
TGAAACGACTTTTTCACAAATTATTTTACCTCGCCTCCTCTTTCTGAAGA
TTTGAATCTTACATAATCGGTAGCCAGTTTAGAGCCGAGTATCTATGATA
GTCCCCGGTCAGGGCCACTTTCAAGATTATTTTAGATTTTTTTATATCGT
CCATTACAAAGGAAAATATCATGCGGTTGTCAAAAGAAAAATTAGCTGCC
AACTCTTATCGACCTAAACTGACTTCGACCGCAAAACCCGTTCATGAGTT
TCCTTTGGCTCGAAACTTATTTCTTATATAGTGATTAGTCTTTGACTATA
ACATAGTCCACGATTATTTTGTAGTAGTAAATATTTTTCAAACGATTTTT
CAATTTATACAATGTAACATTAATTAATTGGTCATTTTAGAGTTTTTGCT
TACATGGAGCTTGCGCAATGTCGTACGATAGCCAATGTCAAGTTTTTTGG
GGCAAAAGTAAGTTCATTTTAAATAAAAACAATTATCAATCAATGTTTCG
AATTTGAAAACCCTATAGAGTCATATGTTTAGTGGTAAACCTGAAGTGGT
CAGTGAAAGTACACATGTTGCCTGTACTTTTTTTATAAGAATAACATCCA
AAAATTTTGGGGTCTTTGGAACTTTTTGAGCTTTAAGCCTAAAATGATCT
CAACTTGTTCTTATTTTCGCCATTTTGTGAGTATTTTTGTGTACTTTTCT
AAGAAAACGGGTGTTTTAGAATCCACAAAGCCTTGAAATGTTCTGAACTT
TTTCTTAATATTTTGGCAATCGAAACCTTATGTTCTTATATAGTTTGTTC
TCATAAAAAAAACGTGTAATCCTCCAAAAGATATTTACTGACATGCATAC
TTTAGTAGCTAAGGGTGCTTTTTCACTGCGAAAATCGATTAGCTGAAGCA
AAGAAAATTGATAGAAAAACATTACTGACTCCCAAAACAGTTGTCAAAGC
GTTTACGACCCTTTGAATTTGGAGTTAATTGCAGCATTGTTGACAAAATT
TAATTGAAAGTAATTATAAGTCAGTCAATTATAAACAGTTCCCCAACAGC
GGAGGCAGTTCTTTCATTTTATGCAAAAACCAAACCATTTCACTGCTGAT
AAATGTTGATGCACTGAATGGATATTCAAAGAAGTAAGACACCTCTGTCT
GCTATTTTATTGCAAACAATCTATTGAGTTCGGTGTATCTTTGGTTTGAT
TGGTCATTATAAGCCAAGAGAGCTCTACCCCTCTCTTGGAGAACAAAATG
TTTAATGACCAATTTTCGACGTTAAATCTTGAATGTTAATATGAAGCGAT
CAAAATCTGATTTTAAGCACGAATCTTCATTGTATATTTTTTACAACCCT
TAGAAATTTATGAAAAGGACCGTTGATGAGAACCACTTATCTATCTACCA
TAGTGAAAAAGCACCCTAAGTTCTTACGTCAGGGAAGACGTTTTATGAGA
AACAATATTTTTTCGGAATTTCAGATGCATTGAAGGGTCATGATATTTGT
TACAAGAATTTGAACACTCGTGGAGACACCTTTGGGAATTGTGGAATGGA
TGATCAAGACAATTACATTAAATGTGAACTCGAGTAAGCCACAAAGGAGG
GAATACGAGGATAACTATTTTCTTAAGGATTAAACTTTTTTAGAAATTGC
AGGCTTAGATTCTTGCAAAAGTCTTTCAAAAAATATTTTTGAAGCCCGAT
ATGATTCTTAAAAAATGAACTGAAAATATTGCATCTAATTTCTAGAGATA
CATTATGCGGTTACTTGCAATGTACTGGCGAAAATTTACCTATCTTTCCA
ATCATTGGTTCAAACAGAAAAGCATCTGTGTTTTCCTTTACTTCTGAAAA
CACACGCATCACTTGCAGGTAGTTTTGCAATGTGTCTCGATAAAAACGAA
ACAGATTCTAAATATGTACGCAGTCAACACTTTCCAATACGATTTTTAAG
GGGAATCGGATTTTCATCGAATTAAGAAGCGTTTCGAATAGTGGAGCGTC
GTTTATTAGAGTTTCTTGTTGATGATGACTTTCAATATTATCGAATAATG
GAGTGTATTTAAAGGAGTGTAGACTTTTAAACCGACCCCTTATAGCATAC
CCTTCATATTTTCTCTTTTCTACAGGGCAGGCTCCACCTACCTTGGTTTT
GACGTCAAAGATGCAACTCTGGTCGCTTCTGGAACGAAATGCGGAGAAGG
AAAGGTGGATGATTTTCTTCTTAAAATGCTCAATAACATAGTTCAAGGAA
ATATGAATTTAATCATATGCTTATACCCTAAATAAGTATTTAACAACAAC
ATCATCTCGACTAAGAAGTCTTTATGAAAAGTATTTTTTGACTGTATAAC
TTTTAAACTTTCTATAGGTGTGTCATGAGAAGCGTTGTATCAATGTTACA
GACCTTCAACAATCGAAGTGCGTTTCAAAATGTCCACCTGACAAAGTGTG
TAGCAACGAAGGAGTGTGTCGGTGTTTGTACAGTTTGGACAATGTAACGT
GTATCAACCCTCCTCCCCTGCAACGAAAAGCTGTTGAAGGAGAAATTAAA
GGTAACATACGCACGCGCAATGCACCGTAGCCAGAAATAGATTACTCTCG
GGTGCTTACTTAATAAACAGGGGGAGGGATTAATCTTCTTATATTTCAAT
AAACGAAAGTCGTACTTTTGAAGCAGAAGAAAGACAAATAATATTACACC
AGCCTTAACTTGAACCCATCAATCCTAACTGGCAACATTCTGTAGTTTAA
TTTTCCATGATTTTCTTTAGATGATTCAAACAGCAACACTTTGATCGGTG
TTTTAGTCACCCTGATAATCCTCCTCCTCTTGTTGATTGTCATTTTGTTC
TTCAAAAGGAAATCAATACAAGCCTTCTTATTGAGACGAAAGTTGAGGTG
AGATTCTTTACAAAGATCAAGATAAACTGACCTTTACCCCTTCTTTGGAA
AGAGTATTTCTACCTTTCTTTTCATAACCCTTTTAAGAAAAATTGTGCAG
CCGAAAGGCGTAAAGATGGCCCTCAAATCTACACATACCATGGGCCCCGT
CAACGCCCCCCCCCCCACTTTATTCCAGACCATGTTATACTTTTTTTAAA
GTTACTATTTTAAGCCATAGAAACTATTGTTCTCCCCAATTAGATATCGT
TTTAAGGTATTTTGAGGGTGTAAAAAAAGTGAAAAACTTTCAAAAGGACT
CGCCGGGGCCCATGCCTAGTACACCTATTTGCCTTTAACTGGAATTTTCC
CTTTCCCTCACTCTCTCCGCTACACTTTCGATATTGTGAGCCTGATTTAC
CTGAATTTATAAGTTGCAAAGAATAGAGGAAAACAGTTTTAAAGTTTATA
GTCTTTTAAATTCAATATTTTTCTACATTTCTTCAGTTGCGCAAGCTCAG
CAATAACCGCGTTAGCTGATTCCAATAACAACCAATCAGCGTCTACCATT
GTCGATATGGACCAATCAGATGCTTCGTTCAAAGAAAAACCATCCCTGAC
TAATAAGCGGAAGATCAGTTTCGCTTCCAAGTTGTTTGTTGAAATCAGTT
CCGTAAGCAGTGGTTTCCGAAATCCTTTGAAGTCTATTGATGTTACCAAA
AGGTTGAACGAACTTGGTAAAGAATCAATGGTTGACGATCCTACTGTTTC
TGGTAATGTTGGTAAAGCACCAAAAGTACATTGCGATTCTCTTACAGATA
CTGAAAATATGCCCAAAAATCTCGAGCAAAGTGGAAATGAAGTAAGCTCA
CTTGTTAAATCTGCTAATCCTATCCTTGTTAGAGAATCTAGCGTTGATCA
AGATCCAGAGAGAAAGAAATTACAAGTTGATCAAGCATTGGAAATCACTA
GCCTTTATGGCTTGGAAATGGACCTTACTCCTAAACTAAAGAAACATCCT
AATAAACTGACACCAATTAAAAGACCTTCCAAAATAAAGAAGAAAAAATC
CTCAAGTAAAACCAAAAGGGTTTCCACTGAAAAGAAAAAAAAGAATTCTG
AAAATCACGAAGAAAAAATTCAAAGAATCAGTGATGTTTTTTCCGAAAAT
GACGATGTTTTTGAAGAAAATCAGGACAAAGGATCTCCGAACGAAGACAT
TCAACCGAGTATCGTGGTTCCTGAAAGTAAACCTCGAAAGCGAGGAGAAA
CTGTATCGGACACTAACCTAGAAATGAAAGCAAGAAATTATTCAATAAAA
TCATCTGAAGTTGTTAAACAGCGTCCAAGAAGCAAAACTACTATGTTAGA
CGTGTCTCCGAACAACGAATCGAAAGGAGCTAACCCTGTTACCAAGGTTA
CCGGCAGGCGTCAACGACAATCAACCGTTCAACCACCAACTTTTACCGAT
ACAAACCAGAAAGTTGGTAGCCTTAGTCAAATCAAGATCTCGCCGCGTAA
AATCAGTACTGCGAGTACCACATTTGAACAACAATCCATGAAAACAAAAG
GTCGTAAAATCAGTCGTGTTAGTCCTTCGGCGTATTCTCCATCAAGTTCT
CCGAATCGACCGCGAAGTAAAACAATGTCAACATCAGCTTCCCGTCAATC
CGCACGCATGCGTAGTGGGACTGAAACGGATCGATCGGATACAAAAGTTC
TAAACGACCACCCACGTCGCAAATTAGCATTCAATTCAAATTACAGCCGC
GAAAACACGCTCCTCGTCAAAGAAGCAACCACAGGCGAAGATGCTGTATT
CGCTGGTGATATTAACTATAATAAAGCGAACTCTCTCTTGGTTAGAGACA
CGACCACAACAAAGAGATCAGTGACAATTGTTCTCGATGATGAAGACACT
GATCTCAATCATTTCTCTAGATACAGAAAACCAAGCTCGACAAACCCGCC
AAATGAGTTAAAAGTTGAAAATAAAACAAATATCAGGAAAATTTCGACTG
TTCAGAAAGGAAGACGTTAAGAAATAAACTCTTGACTTATTCACACAACT
ACTGCTTGGGCTAAACAATGAGTTTCCGTATAATTTATTCGATTAAATAA
ATATATTCCTAAAGAATAAAGTAAAATTTGTAATATTTCCAAGAAACATT
TTTCGGAAACAGATTACAAATGTAATCGTCAGCCGTGCAAAATTACTCGA
ATCTGATTGGTTTAGAGGAGTGCGATTAATCGTTAATTGCACTATTACCA
CTTTTTGCACTCTTCGGCTAAAAAAAACTATGATTTACTAATGATTATTT
ACTGACAATTACCTCGGAATCGTATGTTTTTACTGAAAATCAGTTAATTG
CACCATCGAATTATTATCAGATAGAATGAATTCATGCTTTTTTCCTCAAA
ATGAAGCGTGTCTGTAAGGGGTCCCTTAGTTGCAATGGGAATTCAATTGC
ACGTGTGTAATGATAATGTCATTTCTTTGTTCTTATCGTAATTTAATTGC
ATATTTTCTCATACTTGATTGGATTCTTTTGAATTCTCAAAAAATTATGC
ACATAATTTGATTATTTTCAACTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039105XLOC_039105Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062424-exon-scaffold_364-1575043694:298375..298397TCONS_00062424-exon-scaffold_364-1575043694:298375..298397Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:298189..298260TCONS_00062424-exon-scaffold_364-1575043694:298189..298260Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:297615..297689TCONS_00062424-exon-scaffold_364-1575043694:297615..297689Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:297163..297329TCONS_00062424-exon-scaffold_364-1575043694:297163..297329Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:296024..296102TCONS_00062424-exon-scaffold_364-1575043694:296024..296102Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:295641..295716TCONS_00062424-exon-scaffold_364-1575043694:295641..295716Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:295374..295425TCONS_00062424-exon-scaffold_364-1575043694:295374..295425Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:294856..294952TCONS_00062424-exon-scaffold_364-1575043694:294856..294952Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:294467..294538TCONS_00062424-exon-scaffold_364-1575043694:294467..294538Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:293962..294051TCONS_00062424-exon-scaffold_364-1575043694:293962..294051Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:293684..293764TCONS_00062424-exon-scaffold_364-1575043694:293684..293764Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:293413..293463TCONS_00062424-exon-scaffold_364-1575043694:293413..293463Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:292891..292957TCONS_00062424-exon-scaffold_364-1575043694:292891..292957Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:291765..291873TCONS_00062424-exon-scaffold_364-1575043694:291765..291873Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:291480..291602TCONS_00062424-exon-scaffold_364-1575043694:291480..291602Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:291144..291222TCONS_00062424-exon-scaffold_364-1575043694:291144..291222Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:290797..290980TCONS_00062424-exon-scaffold_364-1575043694:290797..290980Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:290451..290577TCONS_00062424-exon-scaffold_364-1575043694:290451..290577Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1575043694:287873..289961TCONS_00062424-exon-scaffold_364-1575043694:287873..289961Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:298375..298397TCONS_00062424-exon-scaffold_364-1510915933:298375..298397Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:298189..298260TCONS_00062424-exon-scaffold_364-1510915933:298189..298260Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:297615..297689TCONS_00062424-exon-scaffold_364-1510915933:297615..297689Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:297163..297329TCONS_00062424-exon-scaffold_364-1510915933:297163..297329Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:296024..296102TCONS_00062424-exon-scaffold_364-1510915933:296024..296102Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:295641..295716TCONS_00062424-exon-scaffold_364-1510915933:295641..295716Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:295374..295425TCONS_00062424-exon-scaffold_364-1510915933:295374..295425Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:294856..294952TCONS_00062424-exon-scaffold_364-1510915933:294856..294952Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:294467..294538TCONS_00062424-exon-scaffold_364-1510915933:294467..294538Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:293962..294051TCONS_00062424-exon-scaffold_364-1510915933:293962..294051Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:293684..293764TCONS_00062424-exon-scaffold_364-1510915933:293684..293764Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:293413..293463TCONS_00062424-exon-scaffold_364-1510915933:293413..293463Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:292891..292957TCONS_00062424-exon-scaffold_364-1510915933:292891..292957Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:291765..291873TCONS_00062424-exon-scaffold_364-1510915933:291765..291873Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:291480..291602TCONS_00062424-exon-scaffold_364-1510915933:291480..291602Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:291144..291222TCONS_00062424-exon-scaffold_364-1510915933:291144..291222Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:290797..290980TCONS_00062424-exon-scaffold_364-1510915933:290797..290980Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:290451..290577TCONS_00062424-exon-scaffold_364-1510915933:290451..290577Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1510915933:287873..289961TCONS_00062424-exon-scaffold_364-1510915933:287873..289961Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:298375..298397TCONS_00062424-exon-scaffold_364-1491911889:298375..298397Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:298189..298260TCONS_00062424-exon-scaffold_364-1491911889:298189..298260Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:297615..297689TCONS_00062424-exon-scaffold_364-1491911889:297615..297689Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:297163..297329TCONS_00062424-exon-scaffold_364-1491911889:297163..297329Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:296024..296102TCONS_00062424-exon-scaffold_364-1491911889:296024..296102Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:295641..295716TCONS_00062424-exon-scaffold_364-1491911889:295641..295716Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:295374..295425TCONS_00062424-exon-scaffold_364-1491911889:295374..295425Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:294856..294952TCONS_00062424-exon-scaffold_364-1491911889:294856..294952Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:294467..294538TCONS_00062424-exon-scaffold_364-1491911889:294467..294538Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:293962..294051TCONS_00062424-exon-scaffold_364-1491911889:293962..294051Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:293684..293764TCONS_00062424-exon-scaffold_364-1491911889:293684..293764Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:293413..293463TCONS_00062424-exon-scaffold_364-1491911889:293413..293463Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:292891..292957TCONS_00062424-exon-scaffold_364-1491911889:292891..292957Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:291765..291873TCONS_00062424-exon-scaffold_364-1491911889:291765..291873Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:291480..291602TCONS_00062424-exon-scaffold_364-1491911889:291480..291602Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:291144..291222TCONS_00062424-exon-scaffold_364-1491911889:291144..291222Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:290797..290980TCONS_00062424-exon-scaffold_364-1491911889:290797..290980Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:290451..290577TCONS_00062424-exon-scaffold_364-1491911889:290451..290577Clytia hemisphaericaexon
TCONS_00062424-exon-scaffold_364-1491911889:287873..289961TCONS_00062424-exon-scaffold_364-1491911889:287873..289961Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:287873..298397 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.097148	0	0	0.034323	0.00445661	0	5.57402e-10	1.71527e-10	0.595889	6.97528e-08	2.09672e-06	2.44421	0.365006	0.280916	0.394002	0.172827	0	0.171732	0.0737137	0.0801273	0.131293	0.00263458	0.000763813	0.153287	2.79666e-06	1.31439e-05	0.0478988	0.0100069	0	0.0750079
Blast
[Close]
BLAST of TCONS_00062424 vs. Swiss-Prot (Human)
Match: ADAM9 (Disintegrin and metalloproteinase domain-containing protein 9 OS=Homo sapiens GN=ADAM9 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.098e-76
Identity = 181/511 (35.42%), Postives = 267/511 (52.25%), Query Frame = 3 
Query:   21 LVRRSLMEEEEWMFLKCAVVVDRSFFETIGQNNTRDTKRVVADLVDHLSEVFKSLKIRFALVSMET---NSVLNVTTSAGETLRRFKKYNLDVLLRNRRGEHDIALLLTNKXXXXXXXXXXXXXXCTESAASVVTWSGN--VEMTASVIAHEMGHNFGFLHT-GRGCTCSDGPCAMDSSISNPTNEFSSCDQQEFLGYIEKSRFPCLLDVPQ--EIATDAICGNGLVEETEECDCGTKEECA-DPCCDAETCKLKPHAECSSEECCHDCKLKKKGSLCRDIQNDCDLQDFCDGKSSKCTKNSYKEDYTLCNQGNSFCLHGACAMSYDSQCQVFWGKNALKGHDICYKNLNTRGDTFGNCGMDDQDNYIKCELEDTLCGYLQCTG-ENLPIFPIIGSNRKASVFSFTSENTRITCRAGSTYLGFDVKDATLVASGTKCGEGKVCHEKRCINVTDLQQSKCVSKCPPDKVCSNEGVCRCLYSLDNVTCIN---PPPLQRKAVEGEIKDDSNSN 1514
            L+RR      +  +++  +VVD+  ++ +G+N T   + ++  L ++L  ++  L IR  LV +E     +++N+   AG+ L  F ++    L+  RR  HD A L+  KGFGG AG+A VG +C+ S A  +   G   VE  AS++AHE+GHN G  H  GR C+C    C M+S  S   N FSSC  ++F          CLL++P+  E  +   CGN LV+  EECDCGT +EC  DPCC+  TCKLK  AEC+  +CC DC+    G+LCR   ++CD+ ++C+G S  C  + + ++   C    ++C +G C   YD+QCQV +G  A      C+  +N++GD FGNCG    + Y KC   + LCG LQC   + +P+F I+      ++    S  T+  C      LG DV D  +V  GTKCG GK+C   +C++ + L        C   K C   GVC    S  N  C N   PP  + K   G +      N
Sbjct:  200 LLRRRRAVLPQTRYVELFIVVDKERYDMMGRNQTAVREEMIL-LANYLDSMYIMLNIRIVLVGLEIWTNGNLINIVGGAGDVLGNFVQWREKFLITRRR--HDSAQLVLKKGFGGTAGMAFVGTVCSRSHAGGINVFGQITVETFASIVAHELGHNLGMNHDDGRDCSCGAKSCIMNSGASGSRN-FSSCSAEDFEKLTLNKGGNCLLNIPKPDEAYSAPSCGNKLVDAGEECDCGTPKECELDPCCEGSTCKLKSFAECAYGDCCKDCRFLPGGTLCRGKTSECDVPEYCNGSSQFCQPDVFIQNGYPCQNNKAYCYNGMCQY-YDAQCQVIFGSKAKAAPKDCFIEVNSKGDRFGNCGFSGNE-YKKCATGNALCGKLQCENVQEIPVFGIV-----PAIIQTPSRGTK--CWGVDFQLGSDVPDPGMVNEGTKCGAGKICRNFQCVDASVLNYD-----CDVQKKCHGHGVCN---SNKNCHCENGWAPPNCETKGYGGSVDSGPTYN 689
The following BLAST results are available for this feature:
BLAST of TCONS_00062424 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAM91.098e-7635.42Disintegrin and metalloproteinase domain-containin... [more]
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