TCONS_00062392 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062392
Unique NameTCONS_00062392
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1955

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062392 ID=TCONS_00062392|Name=TCONS_00062392|organism=Clytia hemisphaerica|type=transcript|length=1955bp
AATAGCCTCACAATCAAATTAGTAATTACTAAAAACTGTATCACTATGTA
GCATGCCAACAAACGTTTATTGTCATATAATGACGTGCTTAAAGAATTCA
TTATCGAGAGATCTTTTTGTAGTGTTTTCTACCCTATGAACTTTCTTAAG
AGAGAATTTTTATGAGCATGAGCGGGGGAAGTAGTGAAAAAAGTAAAAGG
TTTCTAAATTCGAAACAGATTTTAATGACAATTTGTATTTATGGATATTT
GACAGTTTCGAAGAGCCGGACGTAGAGAATCTTAAAAATGGTTACATTTa
tgctgtttttgatgattgtTAAAGTTGgtgtattttgcagaccagCAATC
AACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATGA
ACACATCTTAAATTCTGAAGATTCTGAAGACCTTTTCGAAGATGATATTG
TCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAAAATAACGTCACCA
GGACGACAACGACGTGACGTCATCACTGGACCATATGCATGGCCAAATGG
GAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAGTTCAGTAAATTTT
GGGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGTGTTCAATTT
ATTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAACGGTACACA
GTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAGACGTTATCTCTCG
GAGACAATTGTCTTTCAGATTCGATTATTCAACACGAATTATTGCACGCC
CTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAGATTATTTTGTTAC
CGTGCACTGGGATAATATTATCAAAGGAAAAGAACACAATTTCGAGAAGT
ATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAAAATCT
CTCATGCATTACTCGAATTACATCTTCGCGATCAACGAAAGCAAAATGAC
GATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGATTTGAAATGA
CCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGTCCATGTGCA
GATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGGACAGTTTAG
GACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACACTAGCGAGA
ATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACTATGTCAAAT
AATACAACAACCTCCTATACGACAGGAAAAAGTCTCCCTACAACGAAAGT
AATTCCTACGGCAACTACGACCATCCAAACAAAGACGACAATAACTACCA
TTGTTTCTTCTACACGGGCCGTCATTACACAAACAACTTCTCCTGAGACA
ACAACGACCATATCTACTCCAACAACGGCCGTCCAATCGACTGCAACTGC
CCTTCCAACGACGACATCGACTACCAGGGGAGTAGGAAACAATACATGTT
TAGACATAAACCCATGTTGCACAGACCTCGCAACACACGGGTTGTGCAAC
AAAAGTGAATATATCCGATCAATATGTAACAAATCGTGCAACAAAGAATG
CAGTGGTTCAAATTCAACAGAACTTTTGGCCACAACACGATCGTCTTTCT
TTGGAGACGAGCCACCAACACCTTCAAAAGCAATAACACTGTTTGCACCA
TTCAGTAGCTCATTTCTTTCACTGTTGGTGAATGTACTTTGGAGATTTGG
ATACACGTGAGATCCGTACGGAAAGATCTTTTGGTTAATGAACGATAGAG
GAGTTAAGTTGACGCTCTTTAactcgattttcaagggaaatttgattttt
aacggATAAGTAagcgtatcaaatagtagactagagtctacttctgactg
aactttgctttctgatgattttgcTGGCGCTGAGTCCAGTAAAGTAGACT
GGAGA
Run BLAST on NCBI

protein sequence of TCONS_00062392-protein

>TCONS_00062392-protein ID=TCONS_00062392-protein|Name=TCONS_00062392-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MVTFMLFLMIVKVGVFCRPAINKRNFTSAFDQIQWNNEHILNSEDSEDLF
EDDIVKSPAIDEIINRKITSPGRQRRDVITGPYAWPNGKVPYVFADDYPE
FSKFWVRSSMDEIQKVSCVQFIERTDEKDYIKIVNGTQCYSSIGRRGSNQ
TLSLGDNCLSDSIIQHELLHALGFFHEQSRLERDYFVTVHWDNIIKGKEH
NFEKYGLGEASHLDEHYDTKSLMHYSNYIFAINESKMTISSKSNASESLG
GFEMTDTDVRQLNKFYSCPCADHMFGCEFITSMCGQFRTQQYCQKSCGFC
HTSENPPMSSTVSSLTTTMSNNTTTSYTTGKSLPTTKVIPTATTTIQTKT
TITTIVSSTRAVITQTTSPETTTTISTPTTAVQSTATALPTTTSTTRGVG
NNTCLDINPCCTDLATHGLCNKSEYIRSICNKSCNKECSGSNSTELLATT
RSSFFGDEPPTPSKAITLFAPFSSSFLSLLVNVLWRFGYT
Run BLAST on NCBI

transcript from alignment at scaffold_364:312915..322101+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062392 ID=TCONS_00062392|Name=TCONS_00062392|organism=Clytia hemisphaerica|type=transcript|length=9187bp|location=Sequence derived from alignment at scaffold_364:312915..322101+ (Clytia hemisphaerica)
AATAGCCTCACAATCAAATTAGTAATTACTAAAAACTGTATCACTATGTA
GCATGCCAACAAACGTTTATTGTCATATAATGACGTGCTTAAAGAATTCA
TTATCGAGAGATCTTTTTGTAGTGTTTTCTACCCTATGAACTTTCTTAAG
AGAGAATTTTTATGAGCATGAGCGGGGGAAGTAGTGAAAAAAGTAAAAGG
TTTCTAAATTCGAAACAGATTTTAATGACAATTTGTATTTATGGATATTT
GACAGTTTCGAAGAGCCGGACGTAGAGAATCTTAAAAATGGTTACATTTa
tgctgtttttgatgattgtTAAAGGTAAAATAGCTTTTGAAGATGTATTT
CATCAATTCTACAACACTTATTAATGCGATCTAATAATCAAGAGGATATT
GGTAATCGGATTCAATGAAACTTTGATTGGCATTATAGAATAAATCAAAC
GTGGTCGAATTAAGATTCAATCAACCTGACATGGTTGAAAATTCGATTGG
TATTCGAGCAATATCAATAATCCATCGGACAAGAGGATTCCCTTACAAAA
ATCTAAGGGGTGCCTTTCCTTGGgactatttttttccaaaactgaTTATA
AACCTATCTAGTGTCACTGTTTTCTTAAATGAgtttttaaaaagtgtttt
tttgatATTTGCTTTCAGTTGgtgtattttgcagaccagCAATCAACAAG
AGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATGAACACAT
CTTAAATTCTGAAGGTGCGTCTTTTCCTGATGGTTGAAAATCAACATGAA
AAGCAAACGAACACAAAATTTGACCCCTGTTATCAGACAATGcgattttt
ttatttacctttATAGCGTATTGATTTTGGCGGAGATTAAATTTGGtgaa
tttggcggattttgctAAAATACACCAAATTAAATCCCAGCTAAATTATA
CAAATTCtgctatccgccaaattaaatacccaCCAAAAATCACATTTTGG
CCAACCAACAAATTAAGTACACaccaaaattaatacacttaagATAATCT
AATCGAGTGGACTGTTTATTTCTACGTTGAATTACTGGAAATTACTTGAA
TTACTTTGGAAGGCAGCTAAAGTTGGACTATTCTCCTTGGAAATACCTTC
CCAACGGTGTATAGATTAATACATTAATAGGTGTCCTTTGTCTTATAGAT
TCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTCCCGCAATCGATGA
AATTATCAATCGCAAAATAACGTCACCAGGACGACAACGACGTGACGTCA
TCACTGGACCATATGCATGGCCAAATGGGAAGGTTCCTTACGTATTTGCT
GATGATTATCGTAAGTTTTGGTGTCGAGTTCAGACTTCATTATTTTTATC
TCTTCCAGCCGAATTAGACGTGAATTCAAGAAActtaattaaaagtttat
taaAGTTCTATGGTGAATTGAAGCTTTTTATGGCATTGGTTATGaataac
aaaataagaacatacagtatgtggcccccaaaacggcgatcaaatttgaa
gtttctctcaaatctagaggaaaagagattttacaaacatttttgctgca
tgaaaacctttaacatctctactttatttcctggaagttctttttcaaaa
ttttcaatttaacaatatttttcaatcgcttaaagataggtagctttttt
ctaatggcccccaaaacggaggtttgaaattttagcgatttctcgagata
tctttaagatatgaatacaaaattttgaccatagttttgaaatatgattt
agagggttttgggcataaatttatttgataaaatttttacagtgNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNttatgaaatatttcaagatttttgatattgcaaagtccaaact
gaaaatttagaaattttcaaaatgacaattttgatttaacaacgtcttaa
tcaagtttttgagaacaaatctcttttgaaaatagttccatttatgtatg
gaataagctgtgaaaattttagaaaaaaagcttaactcaaactgaaaata
ttaagctttaaagatatttttctcctatattttgcaNaaacatgctcatt
tttaagtatacccatcattctttcaaaataaacaaaaatcgtttaattct
gataaatctacaagtcagaatcttcatttcaatgaaatcctccgttttgg
gggccgtctccgttttgggggccgtatACTGTAAGGAACCGTATTCACCA
CTTCTACCACTTTTGGGGTCGAGTTTATACTTTAATACTATTTACAAGAT
AGGATTTCATATCAAGTTTTCCGGTTTCTTCCAGGATTCAGGCGATCCAA
GTATCTTTCTTGCGCTCGATTCCCTGAGAAACTTTCCAGAGGATATTCAT
TTTTCTGACACTCATTATTCATTCTATTCAGCCGAGTTCAGTAAATTTTG
GGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGTGTTCAATTTA
TTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAACGGTACACAG
TAAGTAAACACACAGTCTGATTTAATTGATGAATTTTGATAGCCCAAATG
AgatcagtgaaatattttttattatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccaaaa
tactggttgaccttcaagatgctatatcttttacccagcctctaaagtca
cagatgtatttgcattttctgaacggcattaggtgtagcaAGTTttctat
accccgttttcataacttattttcaatatccaaggagctagagtgagtta
tatgcaattttaatctaattttggtgctaaaatatttcctttagacgcaa
atattNattttttgtcacttttattttgttgctattaaagagaGACAATA
AAAGAGTTCAATTGTGAATTTCGTGAACAATTGAATGACTTTAAATCAAT
AGGTTtacgttggttattggatttattaaccctcggtgataaatattcaa
ctcggcttcgcctcgttgaatattacatcacctcgggttaataaatctca
ataaccaacttttacctactgaatatctgcttattatgtCGTCACACCCC
GTCACACGTTCATCTATGTCTCAGTCAAAGTTTAGggtcttttgaaagaa
aagtagactggagtcgtttataaatTATAATCCGTCTAACACATTAATAT
GGGTAACTATAATAATACGATCATTGTAACGGGATAATAccagatacctt
atcggccctaaTTTATACCTTCCATtattttttgcctatttttcaaTTTG
TCCGAGTTAGTCGTCTAAAATACTGGATTAAAAGAAaagcaaatattttt
taaaataaaaccgATAAAACAATGTCTTTTTCTCCAGGTGTTATTCATCC
ATTGGTCGACGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCT
TTCAGATTCGATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTC
ATGAACAATCGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGAT
AATATTATCAAAGGTGAGAATGAGAATGTCAGGTTTGGAAAAAGTAATGT
GTAAGGTATGAGCAAGCTTCCCATTGAACTTTCCATACAATTGATTTACA
ACGCGCTTCTTCAAAACAACACCCTTTCTCAATCAAGTGAACAAAAGTTC
GCAGAATTCCAATGAGTCAAACGGAGCAAATAAACGCAGTTTGTATACTT
TAAGGTCCCAAATAGGGTccgaaatcttttcaaaatctaataaaCGAGGA
GGTCGGAAATAGTTTCtctaaacccccccccctccaaaaaaaaaaaaaaa
aaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaaaaaaaaaaaaaaa
aggtaattattATAAGCTCAAACCAGGTTTTTTAGAGCAATTCAGCTTGT
GATagatgaaattattttcaaaaataaataaacagggGGGAGACGTTTCT
TCGGGACCTTAAAGTGGTTATAATTTCAAGTCTCACTGGATCCGTTAATT
TTCTGAGGaatctggtggctggtcagcaAGCAATCCCAGGATTACTTTAT
TCcgtttattgcaatatgcaacAAGCAAGAGTTCATGATTCTGATGGTTT
CAAGAATTGTATACTTTGATTTTTTAGGAAAAGAACACAATTTCGAGAAG
TATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAAAATC
TCTCATGCATTACTCGAAGTAAGATAAACTAACGGAAAATTGCCAAATTA
TTCTATTTTTACCAAATTATTGGAATACCTTTGTATGACTTATAATCATG
ACCGAAAGTGAAACTATCAGAATCATTGAATATTGTCTTGACTTCATTGA
CATCATTTATTGACGAgtaaagaataaagaaaaagtcaaacaaAGACATA
ACTGATCTCTTTCTAATAAACCTAGGAGGTGTGGTTCTGtggttaaattt
caaaaaatatgggAATTCTTTTTCAGTTACATCTTCGCGGTCAACGAAAG
CAAAATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGAT
TTGAAATGACCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGT
CCATGTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGG
ACAGTTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACA
CTAGCGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACC
ATGTCAAATAATACAACAACGTCCTATACGACAGGAAGNCAGTATTGTCA
GAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAA
CGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTAT
ACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTAC
GACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGG
CCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACT
CCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATC
GACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATGAACCCATGTT
GCACAGAGCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGA
TCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAAC
AGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAA
CACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTT
TCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAGATCCGTA
CGGAAAGATCTTTTGGTTAATGAACGATAGAGGAGTTAAGTTGACGCTCT
TTAactcgattttcaagggaaatttgatttttaacggATAAGTAagcgta
tcaaatagtagactagagtctacttctgactgaactttgctttctgatga
ttttgcTGGCGCTGAGTCCAGTAAAGTAGACTGGAGAATACGgcaatctt
gaattttttcattttgttttaaaaattataagttaactaaaatattaaaa
ccccatcaaagtttatgagactataataaaaacatgaaaatacctcctaa
atttgaaaaaagaaactggTCTATATTGGTCATGGTTTTCTGTTTGCTTT
TCTttaaaaagggactggatctaaTGGCATGGATTTGCTACCATGTCGAG
TCGGCCAATTAacaccgggccacttatcagtgCCATCCAGTCTATTAAAA
AGCAATGTGGCCCGGGCtaatcgaatagtagagcgtcgtgaGGCTCTTGa
ggacggtgactttcaatatttgaGAGCGTCAAGCGATTTCGTAGTTGATA
GACATCAATGGTTATTGTCAAAGAAAAATGAACTTTGACCTGACTGACAT
ATTTTTGAAcctttcaattattttgtttagacagttttgttaaaattttc
aaataaaattttttagttATACATCGTTTCTATTCTTAAGAGTATCAGCA
GATATTTAAAATCCAATTATATGCGAATTAATTTCATGTCTATTTAATTA
GGTTGATTGAAAATCGATACTGGAGAAAATATTTGACTCAAAATATTGAT
TCCAATGAAATGGGAAAAGTCACGCATTTCCCAACACCAACAAtgtaata
caaaaaaaatatgcAACATGAATTTGCAGTCGAGAATTTTGCTCGATTAC
TTTGTTTGAGCCAAACAAACAAGACATCGAGACAAATAAGAGTATAAAAG
GCTACGAGTTGTGTTTGACTGCAACAGTTCTTTACAAACCAATTCAATAT
GCTGAAGCTTTTGGTGACGCTTTCATTGGTGACATGCCTATGTAGGTAGA
CTTCCAAAATTTATTCATTTCACTTGTATCTTGTATGAAAGCCGAAAGTT
GATTCTATATTCCGACATTTAAAACGTTAGATTTAATATGATCCATAAAG
GCTTTAGAGAAGCATGCGGCGTCTTAGTAGCAAATTATTTAAAAGTGAAT
CTTCTGCCATTAAAAATTGCCATGTCAGTCTTTTGACTGTTTTTTTGGGA
ATCTTTAGCCTGCGGtttcaaaattctttctttGTACTATATTTATGCTC
ATCTCTTATGTAAAAAATGCTTCTTACATGACATTAGTACGAATCCCAAT
TCCTTCACTTTGAATTTACAGGGGCATCCTGTTACGACAAAGACGGGGAA
AGAAATTGTAAAAGCTGGAAAGACACCAGTAACTTTTGCAATCGACCAGA
TGCTGATCAATATTGCGCNNNNNNAAAAAATATGGGAATTCTTTTTCAGT
TACATCTTCGCGATCAACGAAAGCAAAATGACGATCTCATCGAAATCCAA
CGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTTCGAC
AATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGGCTGT
GAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATTGTCA
GAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAA
CGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTAT
ACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTAC
GACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGG
CCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACT
CCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATC
GACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATAAACCCATGTT
GCACAGACCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGA
TCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAAC
AGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAA
CACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTT
TCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAGATCCGTA
CGGAAAGATCTTTTGGTTAATGAACGATAGAGGAGTTAAGTTGACGCTCT
TTAactcgattttcaagggaaatttgatttttaacggATAAGTAagcgta
tcaaatagtagactagagtctacttctgactgaactttgctttctgatga
ttttgcTGGCGCTGAGTCCAGTAAAGTAGACTGGAGA

Coding sequence (CDS) from alignment at scaffold_364:312915..322101+

>TCONS_00062392 ID=TCONS_00062392|Name=TCONS_00062392|organism=Clytia hemisphaerica|type=CDS|length=10311bp|location=Sequence derived from alignment at scaffold_364:312915..322101+ (Clytia hemisphaerica)
ATGGTTACATTTatgctgtttttgatgattgtTAAAGTTGgtgtattttg
cagaccagCAATCAACAAGAGAAATTTCACAAGTGCATTTGATCAAATAC
AATGGAACAATGAACACATCTTAAATTCTGAAGATTCTGAAGACCTTTTC
GAAGATGATATTGTCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAA
AATAACGTCACCAGGACGACAACGACGTGACGTCATCACTGGACCATATG
CATGGCCAAATGGGAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAG
TTCAGTAAATTTTGGGTGAGATCGTCCATGgatgaaattcaaaaagtcag
tTGTGTTCAATTTATTGAAAGAACTGACGAGAAAGATTACATCAAAATCG
TCAACGGTACACAGTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAG
ACGTTATCTCTCGGAGACAATTGTCTTTCAGATTCGATTATTCAACACGA
ATTATTGCACGCCCTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAG
ATTATTTTGTTACCGTGCACTGGGATAATATTATCAAAGGAAAAGAACAC
AATTTCGAGAAGTATGGGTTGGGTGAAGCATCACATTTAGATGAACACTA
CGACACAAAATCTCTCATGCATTACTCGAATTACATCTTCGCGATCAACG
AAAGCAAAATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGA
GGATTTGAAATGACCGACACGGACGTTCGACAATTGAACAAATTTTACAG
CTGTCCATGTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGT
GTGGACAGTTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGC
CACACTAGCGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCAC
AACTATGTCAAATAATACAACAACCTCCTATACGACAGGAAAAAGTCTCC
CTACAACGAAAGTAATTCCTACGGCAACTACGACCATCCAAACAAAGACG
ACAATAACTACCATTGTTTCTTCTACACGGGCCGTCATTACACAAACAAC
TTCTCCTGAGACAACAACGACCATATCTACTCCAACAACGGCCGTCCAAT
CGACTGCAACTGCCCTTCCAACGACGACATCGACTACCAGGGGAGTAGGA
AACAATACATGTTTAGACATAAACCCATGTTGCACAGACCTCGCAACACA
CGGGTTGTGCAACAAAAGTGAATATATCCGATCAATATGTAACAAATCGT
GCAACAAAGAATGCAGTGGTTCAAATTCAACAGAACTTTTGGCCACAACA
CGATCGTCTTTCTTTGGAGACGAGCCACCAACACCTTCAAAAGCAATAAC
ACTGTTTGCACCATTCAGTAGCTCATTTCTTTCACTGTTGGTGAATGTAC
TTTGGAGATTTGGATACACGTGAATGGTTACATTTatgctgtttttgatg
attgtTAAAGTTGgtgtattttgcagaccagCAATCAACAAGAGAAATTT
CACAAGTGCATTTGATCAAATACAATGGAACAATGAACACATCTTAAATT
CTGAAGATTCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTCCCGCA
ATCGATGAAATTATCAATCGCAAAATAACGTCACCAGGACGACAACGACG
TGACGTCATCACTGGACCATATGCATGGCCAAATGGGAAGGTTCCTTACG
TATTTGCTGATGATTATCCCGAGTTCAGTAAATTTTGGGTGAGATCGTCC
ATGgatgaaattcaaaaagtcagtTGTGTTCAATTTATTGAAAGAACTGA
CGAGAAAGATTACATCAAAATCGTCAACGGTACACAGTGTTATTCATCCA
TTGGTCGACGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCTT
TCAGATTCGATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTCA
TGAACAATCGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGATA
ATATTATCAAAGGAAAAGAACACAATTTCGAGAAGTATGGGTTGGGTGAA
GCATCACATTTAGATGAACACTACGACACAAAATCTCTCATGCATTACTC
GAATTACATCTTCGCGATCAACGAAAGCAAAATGACGATCTCATCGAAAT
CCAACGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTT
CGACAATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGG
CTGTGAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATT
GTCAGAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCT
TCAACGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTC
CTATACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAA
CTACGACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACA
CGGGCCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATC
TACTCCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGA
CATCGACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATAAACCCA
TGTTGCACAGACCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATAT
CCGATCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATT
CAACAGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCA
CCAACACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATT
TCTTTCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAATGG
TTACATTTatgctgtttttgatgattgtTAAAGTTGgtgtattttgcaga
ccagCAATCAACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATG
GAACAATGAACACATCTTAAATTCTGAAGATTCTGAAGACCTTTTCGAAG
ATGATATTGTCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAAAATA
ACGTCACCAGGACGACAACGACGTGACGTCATCACTGGACCATATGCATG
GCCAAATGGGAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAGTTCA
GTAAATTTTGGGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGT
GTTCAATTTATTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAA
CGGTACACAGTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAGACGT
TATCTCTCGGAGACAATTGTCTTTCAGATTCGATTATTCAACACGAATTA
TTGCACGCCCTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAGATTA
TTTTGTTACCGTGCACTGGGATAATATTATCAAAGGAAAAGAACACAATT
TCGAGAAGTATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGAC
ACAAAATCTCTCATGCATTACTCGAATTACATCTTCGCGATCAACGAAAG
CAAAATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGAT
TTGAAATGACCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGT
CCATGTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGG
ACAGTTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACA
CTAGCGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACT
ATGTCAAATAATACAACAACCTCCTATACGACAGGAAAAAGTCTCCCTAC
AACGAAAGTAATTCCTACGGCAACTACGACCATCCAAACAAAGACGACAA
TAACTACCATTGTTTCTTCTACACGGGCCGTCATTACACAAACAACTTCT
CCTGAGACAACAACGACCATATCTACTCCAACAACGGCCGTCCAATCGAC
TGCAACTGCCCTTCCAACGACGACATCGACTACCAGGGGAGTAGGAAACA
ATACATGTTTAGACATAAACCCATGTTGCACAGACCTCGCAACACACGGG
TTGTGCAACAAAAGTGAATATATCCGATCAATATGTAACAAATCGTGCAA
CAAAGAATGCAGTGGTTCAAATTCAACAGAACTTTTGGCCACAACACGAT
CGTCTTTCTTTGGAGACGAGCCACCAACACCTTCAAAAGCAATAACACTG
TTTGCACCATTCAGTAGCTCATTTCTTTCACTGTTGGTGAATGTACTTTG
GAGATTTGGATACACGTGAATGGTTACATTTatgctgtttttgatgattg
tTAAAGTTGgtgtattttgcagaccagCAATCAACAAGAGAAATTTCACA
AGTGCATTTGATCAAATACAATGGAACAATGAACACATCTTAAATTCTGA
AGATTCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTCCCGCAATCG
ATGAAATTATCAATCGCAAAATAACGTCACCAGGACGACAACGACGTGAC
GTCATCACTGGACCATATGCATGGCCAAATGGGAAGGTTCCTTACGTATT
TGCTGATGATTATCCCGAGTTCAGTAAATTTTGGGTGAGATCGTCCATGg
atgaaattcaaaaagtcagtTGTGTTCAATTTATTGAAAGAACTGACGAG
AAAGATTACATCAAAATCGTCAACGGTACACAGTGTTATTCATCCATTGG
TCGACGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCTTTCAG
ATTCGATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTCATGAA
CAATCGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGATAATAT
TATCAAAGGAAAAGAACACAATTTCGAGAAGTATGGGTTGGGTGAAGCAT
CACATTTAGATGAACACTACGACACAAAATCTCTCATGCATTACTCGAAT
TACATCTTCGCGATCAACGAAAGCAAAATGACGATCTCATCGAAATCCAA
CGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTTCGAC
AATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGGCTGT
GAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATTGTCA
GAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAA
CGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTAT
ACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTAC
GACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGG
CCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACT
CCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATC
GACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATAAACCCATGTT
GCACAGACCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGA
TCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAAC
AGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAA
CACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTT
TCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAATGGTTAC
ATTTatgctgtttttgatgattgtTAAAGTTGgtgtattttgcagaccag
CAATCAACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGAAC
AATGAACACATCTTAAATTCTGAAGATTCTGAAGACCTTTTCGAAGATGA
TATTGTCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAAAATAACGT
CACCAGGACGACAACGACGTGACGTCATCACTGGACCATATGCATGGCCA
AATGGGAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAGTTCAGTAA
ATTTTGGGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGTGTTC
AATTTATTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAACGGT
ACACAGTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAGACGTTATC
TCTCGGAGACAATTGTCTTTCAGATTCGATTATTCAACACGAATTATTGC
ACGCCCTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAGATTATTTT
GTTACCGTGCACTGGGATAATATTATCAAAGGAAAAGAACACAATTTCGA
GAAGTATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAA
AATCTCTCATGCATTACTCGAATTACATCTTCGCGATCAACGAAAGCAAA
ATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGATTTGA
AATGACCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGTCCAT
GTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGGACAG
TTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACACTAG
CGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACTATGT
CAAATAATACAACAACCTCCTATACGACAGGAAAAAGTCTCCCTACAACG
AAAGTAATTCCTACGGCAACTACGACCATCCAAACAAAGACGACAATAAC
TACCATTGTTTCTTCTACACGGGCCGTCATTACACAAACAACTTCTCCTG
AGACAACAACGACCATATCTACTCCAACAACGGCCGTCCAATCGACTGCA
ACTGCCCTTCCAACGACGACATCGACTACCAGGGGAGTAGGAAACAATAC
ATGTTTAGACATAAACCCATGTTGCACAGACCTCGCAACACACGGGTTGT
GCAACAAAAGTGAATATATCCGATCAATATGTAACAAATCGTGCAACAAA
GAATGCAGTGGTTCAAATTCAACAGAACTTTTGGCCACAACACGATCGTC
TTTCTTTGGAGACGAGCCACCAACACCTTCAAAAGCAATAACACTGTTTG
CACCATTCAGTAGCTCATTTCTTTCACTGTTGGTGAATGTACTTTGGAGA
TTTGGATACACGTGAATGGTTACATTTatgctgtttttgatgattgtTAA
AGTTGgtgtattttgcagaccagCAATCAACAAGAGAAATTTCACAAGTG
CATTTGATCAAATACAATGGAACAATGAACACATCTTAAATTCTGAAGAT
TCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTCCCGCAATCGATGA
AATTATCAATCGCAAAATAACGTCACCAGGACGACAACGACGTGACGTCA
TCACTGGACCATATGCATGGCCAAATGGGAAGGTTCCTTACGTATTTGCT
GATGATTATCCCGAGTTCAGTAAATTTTGGGTGAGATCGTCCATGgatga
aattcaaaaagtcagtTGTGTTCAATTTATTGAAAGAACTGACGAGAAAG
ATTACATCAAAATCGTCAACGGTACACAGTGTTATTCATCCATTGGTCGA
CGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCTTTCAGATTC
GATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTCATGAACAAT
CGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGATAATATTATC
AAAGGAAAAGAACACAATTTCGAGAAGTATGGGTTGGGTGAAGCATCACA
TTTAGATGAACACTACGACACAAAATCTCTCATGCATTACTCGAATTACA
TCTTCGCGATCAACGAAAGCAAAATGACGATCTCATCGAAATCCAACGCC
TCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTTCGACAATT
GAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGGCTGTGAGT
TTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATTGTCAGAAA
AGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAACGGT
TTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTATACGA
CAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTACGACC
ATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGGCCGT
CATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACTCCAA
CAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATCGACT
ACCAGGGGAGTAGGAAACAATACATGTTTAGACATAAACCCATGTTGCAC
AGACCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGATCAA
TATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAACAGAA
CTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAACACC
TTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTTTCAC
TGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAATGGTTACATTT
atgctgtttttgatgattgtTAAAGTTGgtgtattttgcagaccagCAAT
CAACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATG
AACACATCTTAAATTCTGAAGATTCTGAAGACCTTTTCGAAGATGATATT
GTCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAAAATAACGTCACC
AGGACGACAACGACGTGACGTCATCACTGGACCATATGCATGGCCAAATG
GGAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAGTTCAGTAAATTT
TGGGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGTGTTCAATT
TATTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAACGGTACAC
AGTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAGACGTTATCTCTC
GGAGACAATTGTCTTTCAGATTCGATTATTCAACACGAATTATTGCACGC
CCTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAGATTATTTTGTTA
CCGTGCACTGGGATAATATTATCAAAGGAAAAGAACACAATTTCGAGAAG
TATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAAAATC
TCTCATGCATTACTCGAATTACATCTTCGCGATCAACGAAAGCAAAATGA
CGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGATTTGAAATG
ACCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGTCCATGTGC
AGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGGACAGTTTA
GGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACACTAGCGAG
AATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACTATGTCAAA
TAATACAACAACCTCCTATACGACAGGAAAAAGTCTCCCTACAACGAAAG
TAATTCCTACGGCAACTACGACCATCCAAACAAAGACGACAATAACTACC
ATTGTTTCTTCTACACGGGCCGTCATTACACAAACAACTTCTCCTGAGAC
AACAACGACCATATCTACTCCAACAACGGCCGTCCAATCGACTGCAACTG
CCCTTCCAACGACGACATCGACTACCAGGGGAGTAGGAAACAATACATGT
TTAGACATAAACCCATGTTGCACAGACCTCGCAACACACGGGTTGTGCAA
CAAAAGTGAATATATCCGATCAATATGTAACAAATCGTGCAACAAAGAAT
GCAGTGGTTCAAATTCAACAGAACTTTTGGCCACAACACGATCGTCTTTC
TTTGGAGACGAGCCACCAACACCTTCAAAAGCAATAACACTGTTTGCACC
ATTCAGTAGCTCATTTCTTTCACTGTTGGTGAATGTACTTTGGAGATTTG
GATACACGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039094XLOC_039094Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062392-proteinTCONS_00062392-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062392-exon-scaffold_364-1491911889:312915..313238TCONS_00062392-exon-scaffold_364-1491911889:312915..313238Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:312915..313238TCONS_00062392-exon-scaffold_364-1510915933:312915..313238Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:312915..313238TCONS_00062392-exon-scaffold_364-1575043694:312915..313238Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:313583..313678TCONS_00062392-exon-scaffold_364-1491911889:313583..313678Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:313583..313678TCONS_00062392-exon-scaffold_364-1510915933:313583..313678Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:313583..313678TCONS_00062392-exon-scaffold_364-1575043694:313583..313678Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:314113..314274TCONS_00062392-exon-scaffold_364-1491911889:314113..314274Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:314113..314274TCONS_00062392-exon-scaffold_364-1510915933:314113..314274Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:314113..314274TCONS_00062392-exon-scaffold_364-1575043694:314113..314274Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:315646..315763TCONS_00062392-exon-scaffold_364-1491911889:315646..315763Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:315646..315763TCONS_00062392-exon-scaffold_364-1510915933:315646..315763Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:315646..315763TCONS_00062392-exon-scaffold_364-1575043694:315646..315763Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:317002..317177TCONS_00062392-exon-scaffold_364-1491911889:317002..317177Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:317002..317177TCONS_00062392-exon-scaffold_364-1510915933:317002..317177Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:317002..317177TCONS_00062392-exon-scaffold_364-1575043694:317002..317177Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:318342..318432TCONS_00062392-exon-scaffold_364-1491911889:318342..318432Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:318342..318432TCONS_00062392-exon-scaffold_364-1510915933:318342..318432Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:318342..318432TCONS_00062392-exon-scaffold_364-1575043694:318342..318432Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1491911889:321114..322101TCONS_00062392-exon-scaffold_364-1491911889:321114..322101Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1510915933:321114..322101TCONS_00062392-exon-scaffold_364-1510915933:321114..322101Clytia hemisphaericaexon
TCONS_00062392-exon-scaffold_364-1575043694:321114..322101TCONS_00062392-exon-scaffold_364-1575043694:321114..322101Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:312915..322101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.257085	0.24672	0.262358	0.346145	0.165903	0.0654847	0.104495	0.123773	0.11986	0.0868608	0	0.18307	22.4668	26.9168	15.6284	15.0501	4.47369	11.7159	0	0.27204	0.0797907	0.0585047	0.32617	0.225675	0	0.0979239	0.529378	1.03507	0.22553	0.232577
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR003582ShKT_dom
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00062392 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.656e-35
Identity = 87/247 (35.22%), Postives = 134/247 (54.25%), Query Frame = 3 
Query:  429 DLFEDDIVKSPAIDEIINRKITSPGRQRRDVITGPYAWPNGKVPYVFADDYPEFSKFWVRSSMDEIQKVSCVQFIERTDEKDYIKIVNGTQCYSSIG-RRGSNQTLSLGDNCLSDSIIQHELLHALGFFHEQSRLERDYFVTVHWDNIIKGKEHNFEKYGLGEASHLDEHYDTKSLMHYSNYIFAINESKMTISSKSNASESLGGFEM--TDTDVRQLNKFYSCPCA-DHMFGCEF-ITSMCGQFRT 1154
            DLFE DI    A             + R  +I   Y WP+  +PYV  D     +K  + ++ +  +  +C+ F     E +YI +  G+ C+SS+G RR   Q LS+G NC   + +QHE LHALGF+HEQSR +RD +V + WD I+ G+EHNF  Y    +  L+  YD  S+MHYS   F  N ++ TI ++ +  E + G  M  +D+D+ +LN+ Y+C  +   M  C F + ++CG  ++
Sbjct:   47 DLFEGDIRLDRA-------------QIRNSIIGEKYRWPH-TIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQ-NGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSSLSFMDSCSFELENVCGMIQS 278
The following BLAST results are available for this feature:
BLAST of TCONS_00062392 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.656e-3535.22Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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