TCONS_00062374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062374
Unique NameTCONS_00062374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length949

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062374 ID=TCONS_00062374|Name=TCONS_00062374|organism=Clytia hemisphaerica|type=transcript|length=949bp
NTCTAATTGGTAAAGCAAGAAGCAATCCAGGATCACATCCAGAACTTCCA
ATGCCTGTTTAACATACGTCAGACATTTGATTGTTACGAAAGTTTTGAGT
GATATGAATTTCCACCCTAAATCTTCCACTTTGAAACACCGGCCGATCCC
CTGGAAACATCTCACAATACAATTCAATTTGATTTTATCTTTATCTCCAT
TCTCGCTCTCGTCTTTGATATCAAATTCAACTCGATACATCTCAAATTCT
CGGCTAATCATANCTCCATTCTCGCTCTCGTCTTTGATATCAAATTCAAC
TCGATACATCTCAAATTCTTTGCTGATCATTGAATCAGTTCTTTCAAGTT
TATGATTCTTCCTAAATTTGAATAAACGTCTTTCATACTCCATCATGATT
TCATGATTTTCTCGGACAGCAAATTTACTTCGCCACAATCTGAAGATGAG
GACAAGCAAAGCTACAATTGCTGGCACTATTACCATAGCTTTCAAACCAT
CCTCACTATATCTAGATTCCCATCTTGTTAAATTATTACCACAAAACGTA
TCATTCCCAACTGTAATGGGTAGCTTGAAACATTCGAATACAGTATTTTC
TGTAGTGTTGTTTAATGTCGTCATGTTTAATGTAGAACTGTTTCCAAAAG
CCATTGTTGCGTTTCTTAAGCTGTCTTGATATGGAAATGATTCTGATTCT
CAACTGTATTTTCGAGCTAATTCTTTGCTTTTATGATGACTACCTCTATG
CATTATCACAGATGATGAAAACCACTTTATTATGCCATTGCATTGATTGG
ttaataatctttttttataCAAACTTTTTATTGTCTTATTGTCTCgggta
ttttattgattttaatcaCTTCACTTTAGTTACGTGCTTGTGCGATGCAC
TGAAATGAAACTCATGCTTGAACTCATGTGagaaattgtttattttctG
Run BLAST on NCBI

transcript from alignment at scaffold_364:142804..155595+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062374 ID=TCONS_00062374|Name=TCONS_00062374|organism=Clytia hemisphaerica|type=transcript|length=12792bp|location=Sequence derived from alignment at scaffold_364:142804..155595+ (Clytia hemisphaerica)
NTCTAATTGGTAAAGCAAGAAGCAATCCAGGATCACATCCAGAACTTCCA
ATGCCTGTTTAACATATGTTAGAAATTTGATTGTTACGAAGGTTTTGAGT
GATATGAATTTCCACCCTAAATCTTCCACTTTCAAACACCGACCAACTCC
TTGGAAACATCTCACAATACAATTCAATTTGATTTTATCTTCATTCTCGC
TCTCGTCTTTGATATCAAATTCAACTCTATACATCTCAAATTCTTGGCTA
ATCATAGAATCAGTTCTTTCAAGTTTATGATTCTTCCGAAATTTAAATAG
ACGCCTTTCATACTCCATAATGATTTCATAATTTTCTCGAACAGCAAATT
TACTTCGCCACAATCTGAAGAAGAGGACAAGCAAAGCTACAATTGCTGGC
ACTATTACCATAGCTTTCAAACCATCCTCGCTATATCTCGATTCCCATTT
TGTTAAATTACCACAAAACGTATCATTACCAACTGTAATGGGTAGCTTGA
AACATTCGAATACAGGATTTTCTGCAGTGTTGTTTAATGTCGTCATGTTT
AGCGTAGAACTGTTTCCAAAAGCCATTGTTGCGTCTCTTAAGCTGTCTTG
ATATGGAAATGATTCTGATTTTCAACTGTTGATGCCGAAGAAACTTATCT
CAGGAAATCAGGAAATGGACTCAATCGCTCCGATAAAACGGTATATTGAA
ACGATAGGCTagaacaaaaaatacaaaactgcTTTAGAAAAATGTACAAA
ACTATAGAAAATCTCTAATCCAGGTACTGTAGAACAGAAAAAAGGCACTc
agaaaaacaaatgaactaaacTGAAATCTAATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGgctg
ttttttgtcgttttttaccagtttttactattttatagagtcaaccagca
ataaactttctttgatatcttttgattgaatgaatatttttgaaaattgt
tttgacagtgatgatgatctaagattgaaaatcactcctgtgaaaatggt
aattataccacatttctacaaaaagttgatttttttcttcttcatttttc
attttcattttccttttttttctcaattttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNaatatctttttaacgagcacaaaat
cgcaacttgattcgaattctatcaaaagttacagccatttttttctccag
ctgcaaattatttcgagacagactttaaaacataacttttatgttcaaat
actaaaatcaattttccgactatggtcagagcccttaagactGGTAACCT
Ctgccgactgtaaactcttttcggcaaaaaaacccgtttgcgaattttct
tcagctttgggcatatttcttagatagtgatttgtcttagactataacat
agtctaatGGTGCATAGATGGCAACATCTTTATTGAGAAATTTCTTTTGT
CTCAAGTGACCTGACAGAATTTTGTCTCTGAAATGCTGGATTAAGGGAAA
ATGGTTGCGTGTACGAAAACCTGtgccaaacaaaagaaacactATCAAAA
CTATTCCCTTGCAACCAATTACGATATGCCAAATGCCGGGATGTGTAAAC
CATCGATTTTGAACTCCCGAAGGGGCTAGAAAGAAAACTCTCGGATGGGA
GATAAAACAACTTATTTCCAATTTAAAACGTGTGACcagcgtggttttca
cacaaacgccagattgcaAATAAAATCTAACGCCGggtaaaaacaaagaa
aacgctagatacaatccgtcatCCAACAGCGGCTAAGATTTAAGAGCTAT
GTCCAGTACACCGGCAAAACCAGAATTGTACTTTGAGTTTGACAGAATTT
ATCTCCTAAATATTGGAaatcgattttgaaaaaatattagggagataaat
ttcaaaaaattacagTATGAATATTCTTTCCATAAGTCTATTCTCCTTAA
TAAAAACACGAAATAAATATGCAAAACATTAGAGACACACATACACACAC
AGACACAGCAGATTTTGGTTTACCGTTGCTCGGGAGTCCAAAATAAGTAA
TTACCCTCTGGGGAAATTCGTTGGTTCAAAATCAGTACataaatctccgg
gaaaatgcgctGATCAAATTGGAAGGAGATAATGAAGATAacaccaaatt
ttagttgaccttGGCTCGGGCGTCCAAAATAAGTAATTAGTTTCTAGGAA
AATTCGTTGATCAAAAATCAGACCATGGActgattttggaccaccgaatt
tccccggagatAAATTACTTATCCTGGACGCACGATATCTATTATCTATT
CACGTTTTGACCACTGCGTTTCGCCGGAGAAAAACTGATGATATTGGACC
ACTATATTACTCCCGGGAATGGCTACTAAAATTGGACCACCACATTATCC
TGGAAACTTTAGTCGAAAATGGTATATTAGGGAGATAATGATGTAAATCA
TTTGCGAAGGTCTTTCGCCGGAGACCAGCGCAAATTTTCCTCAGTACTGG
ACATGAGTGAAATTTAAAGCTtgactttttcttgttttaaaatcCAACAC
TGTAAACGCACTCTATCATTGGAatgatgtttttataagaactttattTT
CATGTTCTTTTCTTTCGTTCTTCAAAGTAGTGCTAAATTCTGTTCTAAAA
GTTGTTCCTCTTTTGAGGAAAGAAAATTAATACCTCGTTTGAaggataat
tttcaatttttggatcaaaagttacaaaGCTCCGAgataaattgttaaaa
attgTCGAAATTAACTTTGACCAAAAAGGTAGGAAAAGTCTGAATACATG
TTTGAAATCAGCAGGGTTCAAAGTTTCAGAAAGGtatgatgaaaaatttt
ttggcctAGTAGAACAattctttgatttttaaccAAAAGCCTCATACACA
TTTTCCTACACTTTCAAATTATTAAATTtaagtttaaaattttgaaaaca
taaTACTGAAACGTCCAAAGATGGAACCAAAATTACTAGTTAGTATAAAA
AAACACGTGTTACTTAGCGACCACAATTCTAGGAATTTATTATTTGCATA
CAAAGTATTTGAACCTCCTGATTGGGTTTTCTATGAATCTCCATCTTTAT
TTTTAGTAGCCACGAGAACGGActtgaaaaatagtttttctaCGAACGGT
CCATAGATGGCtccttttttgacaattttcgcCTCAATGATTATTgctaa
aatgttcttgaaatgcTTGATTTTTAGAATcgctgatttttttctcttaa
aggTTTGAAAGTTCgagaaaaatgcactgtaacggtatgaatttcaccga
tttttttgcGAATTTCCGACCCTGCCAGATAtcattcttgaaaattttta
gtgatttagtTCGATCATGTCAGATGTTTCTAGAACATGACCAGCATTCA
AAATTTGCTCTTAccgaattgttcttataaaaaaacgtgaagaCAAACAA
AAGACAGTGTTTCAATACATTTTAtttaattcatgaaaaaaaattttact
cgaaaatgtttatatttataatttttgaagttATGAGGCTAAAACAGAGC
TAAGATTAAAGTGTCACAATTTAaaccaaaagttttaaaataacaaaaga
attaaTTATTTATACATAAATCTTACAAAAACGAAGCAAAAAACGaagca
aaaaattgaattagTCCATCCAACACACTATCAAACTGTATCGGTGTTCA
TGGTAATTAGTTTTCAGAAGAAATATTTCTCCAGTGTAGAAGAACGAGGG
TTCAACCGAAACCAAACATGTATGACAGCGTAAACAATTTGAATTGTTGC
CAAAGGCGTGAATGTTAGAATCACCACAAGGTAATCTATTCCTCTCATAC
AGCCTGAATCAAAAGGACTTTGGAATATCTTTCCTCCATCCTCAACANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCTTGGAAACATCTCACAATACAATT
CAATTTGATTTTATCTTTATCTCCATTCTCGCTCTCGTCTTTGATATCAA
ATTCAACTCGATACATCTCAAATTCTTTGCTGATCATTGAATCAGTTCTT
TCAAGTTTATGATTCTTCCTAAATTTGAATAAACGTCTTTCATACTCCAT
CATGATTTCATGATTTTCTCGGACAGCAAATTTACTTCGCCACAATCTGA
AGAAGAGGACATGGATGCCAAAAGTACTGGTATGTATAAAAAAGCACGTG
TTACTTAGTGACCACAATTCTAGGAATTTATTGTTTGCATACAAACACTC
ATCGTATTTGAACCTCCTGATTGGGTTTTCTATGAATCTCCATCTTTATT
TTTAGTAGCCATGAGAACGGGtttgaaaaatagtttttctaCGAACGGTC
CATAgatttttttgcgattttccGACCCTGCCAGATAtcattcttgaaaa
tttttagtgatttagtGATCATGTCAGATGTTTCTAGAACATGACCAGCA
TTCAAAATTTGCTCTTactgaattgttcttataaaaaaaacgtgaagaCA
AACAAAAGACGGTTTTTCAATACCTTTTAtttaattcatgaaaaaaagtt
ttactcgaaaatatttatatttataatttttgaagttATGAGGCCTAAAA
CAGAGTTAAGATTAAAGTGTCACAATTTAaaccaaaagttttaaaataac
aaaagaattaattgTTTATACATAAATCTTACAAAAGCGAAGTAAAAAAC
gaagcaaaaaattgaaatagtcCATCCATCACACAATCTAACTGTATCGA
TGTTTATGGTAATTAGTTTTCAGAAGAAATATTTCTCCAGTGTAGAAGAA
CGAGGGTTCAACCGAAACCAAACATGTATGACAGCGTAAACAATTTGAAT
TGTTGCCAAAGGCGTGAATGTTAGAATCACCACAAGGTAATCTATTCCTC
TCATACAGCCTGAATCAAAAGGACTTTGGAATATCTTTCCTCCATCCTCA
ACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGAAACATCTCACA
ATACAATTCAATTTGATTTTATCTTTATCTCCATTCTCGCTCTCGTCTTT
GATATCAAATTCAACTCGATACATCTCAAATTCTTTGCTGATCATTGAAT
CAGTTCTTTCAAGTTTATGATTCTTCCTAAATTTGAATAAACGTCTTTCA
TACTCCATCATGATTTCATGATTTTCTCGGACAGCAAATTTACTTCGCCA
CAATCTGAAGAAGAGGACAAGCAAAGCTACAATTGCTGGCACTATTACCA
TAGCTTTCAAACCATCCTCACTATATCTCGATTCCCATCTTGTTAAATTA
CCACAAAACGTATCATTCCCAACTGTAATGGGTAGCTTGAAACATTCGAA
TGCAGGATTTTCTGTAGTGTTGTTTAATGTCGTCATGTTTAATGTAGAAC
TGTTTCCAAAAGCCATTGTTGCGTTTCTTAAGCTGTCTTGATATGGAAAT
AATTCTGATTCTCAACTGTTGATTCCGAAGAAACTTATCTCAGGAAATCA
GGAAATGGACTCAATCGCTCCGATAAAACGGTATATTGAAACGATAGGCT
agaacaaaaaatacaaaactacTTTAGAAAAATGTACAAAACTATAGAAA
ATCTCTAATCCAGGTACTGTAGAACAGAAAAAAGGCACTCAGAAAAACAA
ATGAACTAAACTGAAATCTAACATACTAATGCTACATAGATAAATAATAC
TCACTAAATTGACAATGTTTTGGGGCTAGAAGGCGTCAGCAGTCTCATTC
AACAAGTGTGGAAAAATATCAAAACGTTTGTGAACTATATCACTTCATCA
TTCAACATCTCTCTTGCTTACAGTATTCAGATGTGAATGAATGATTTCTA
CTGACAACTCCTAGTTTTTATATTAATTACTAGATAATTACTGTATGTAC
AAATTAATTACTTTAATAAAAGAAAATGCGTATAATAAACGAGACAAAAT
GAATGACACAAACCCAAAGGAAACCAAGAGCAACAGAAACGAGACAAAAG
AGATAGGAAACAAAAACAAAAGACCAAAAGATGACGTAAACCAAGTACGA
GAGCAGCCAGGTTTCGCTGCTTTACCTCGGCAGTTTGCCACTTACAAAAT
ATAAAGTTCTACTTGATGTAGCCCCCAAAACTGTGGCATGTTATACATAT
TCTGttaggccaattatccgtgagtctgaaaatttaagaatcgcaatgcg
aaaatttgatgaagaagaaaatgaagacttttgcgaagaagattatttca
actttgaagagcttatttccggcgaagaaaaaacattttgaaatttttat
tgcgctagatggtgtatcttttacctaactaaaattattttttcggaaaa
tttttctaaatgcttatttgcttcaaaatctcgaaaattgtggtttttga
ccagttttcgatcccaatttttgatagaaaaacagccataacttgtgatg
cattaatttagaatgTTTTTCCGAAAGAtctaaaacagttcaattctttg
cagaaagtttgaaagaacttcgaaacaaaaagggtAATTACCAATTAAAA
CTtaacactttttataaaagaaggtgatgcaacatattctttttaaagtt
cataacgtcatttttgcaattaaattcttaattactcataagggatttga
ttaaaagacaatttaaaaaggcaattctttgttaaaagtgttaaagaacc
taaaacataacttttatgttcaaatactaaaatcaattttccgactatgg
tcagagcccttaagactGGTAACTCtgccgactgtaaactcttttcggca
aaaaaacccggTTGCGTGTACGAAAATAAGtgccaaacaaaagaaacact
ATCAAAACTATTCCTTTGCAACCAATTACGATATGCCAAATGCTGGGATG
TGTAAACCATCGATTTTGAACTCCCGACGGGGCTAGAAAGAAAACTCTCG
GATGGGAGATAAAACAACTTATTTCCCATTANACCATCGATTTTGAACTC
CCGAAGGGGCTAGAAAGAAAACTCTCGGATGGGAGATAAAACAACTTATT
TCCAATTTAAAACGTGTGACcagcgtggttttcacacaaacgccagattg
caAATAAAATCTAACGCCGggtaaaaacaaagaaaacgctagatacaatc
cgtcatCCAACAGCGGCTTAGATTTAAGAGCTATGTCCAGTACACCTGGT
GAAAACCAGAATTGTACTTTGAGTTTGACAGAATTTATCTCCTAAATATT
GGAaatcgattttgaaaaaatattagggagataaaattcaaaaaattaca
gTATGACTATTCTTTCCATAAGTCTATTCTCCTTAATAAAAACACGAAAT
AAATATGCAAAACATTAGAGACACACATACACACACAGACACAGCAGATT
TTGGTTTACCGCTGCTCGGGAGTCCAAAATAAGTAATTACCCTCTGGGGA
AATTCGTTGGTTCAAAATCAGTACAAATTTTCGGGGAAATGCGCTGATCA
AATTGGAAGGAGATATTGAAGATAacaccaaattttagttgaccttGGCT
CGGGCGTCCAAAATAAGTAATAAGTTTCTAGGAAAATTCGTTGATCAAAA
ATCAGACCATGGActgattttggaccaccgaatttccccggagatAAATT
ACTTATCCTGGACGCTcgagccaccgtcaaccaagATATCTATTATCTat
tcacgttttgacctctgcGTTTCGCCGGAGAAAAACTGATGATATTGGAC
CACTGTATTACTCCCGGGAATGGCTACTAAAATTGGACCACCACATTATC
CTGGAAACTTTAGTCGAAAATGGTATATTAGGGAGATAATGATGTAAATC
ATTTGCAAAGGTCTTTCGCCGGAGACCAGCGCAAATTTTCCTCAGTACTG
GACATGAGTGAAATTTAAAGCTtgactttttcttgttttaaaatcCAACA
CTGTAAACTCTATCAGTGGAATGATGTTTATACATACATGCCACATACAC
ACTTTCAAATTATGAAATGtaagtttaaaattttgaaaacataaTACTGA
AACGTCCAAAGATGGAGCCAAAATTACTAGTTTGTATAAAAAAACACGTG
TTACTTAGTGACCACAATTCTAGGAATTTATTATTTGCATACAAAGTATT
TGAACCTCCTGATTGGGTTTTCTATGAATCTCCATCTTTATTTTTAGTAG
CCATGAGAACGGGcttgaaaaatagtttttctaCGAACGGTCCATAGATC
GCtcctttttgataattttcgccTAAATGATTATTgctaaaatgttcttg
aaatgcTTGATTTTTAGAATCGCTGATTTTCTTCTCGTAAaggtttgaaa
gtttgagaaaaatGTACTGTAacggtatgaatttcaccgatttttttgcg
attttccGACCCTGCCAGATAtcattcttgaaaatttttagtgatttagt
GATCATGTCAGATGTTTCTAGAACATGACCAGCATTCAAAATTTACTCTT
actaaatttttcttataaaaaaacatgaagaCAAACAAAAGACGGTTTTT
CAATACCTTTTAtttaattcatgaaaaaaaattttttcgaaaatgtttat
atttataatttttgaagttATGAGGCTAAAACAGAGCTAAGATTAAAGTG
TCACAATTtaaacaaaaagttttgaaataacaaaagaaataattGTTTAT
ACATAAATCTTACAAAAACGaagcaaaaaattgaattagTCCATCCAACA
CACTATCTAAAAGTATCGGTGTTCATGGTAATTAGTTTTCAGAAGAAATA
TTTCTCCAGTGTAGAAGAACGAGGGTTCAACCGAAACCAAACATGTATGA
CAGCGTAAACAATTTGAATTGTTGCCAAAGGCGTGAATGTTAGAATCACC
ACAAGGTAATCTATTCCTCTCATACAACCTGAATCAAAAGGACTTTGGAA
TATCTTTCCTCCATCCTCAACAGTAAAACAGGATCGGTCAATTTTGCCGG
TACCGTATTGGTAAGTGGAACCAATGACACGACACATGGTTGCCATGGCG
ATTGGGATCATCATATAGGAAAAAAACTTCATCTTGACTGATCCGTCTTT
CTCTTGGTTAGGGTCGAGTGGTTTCATGTTGGCCCGTCTTCGATGTTGAT
TCTCCAGTTCATCAAGCTTCTGAATATTTTCTTTACACATTTGTTGTAAT
GCCTGAGCTGCAAGCAGTTCAGAATCGATTTCCAAACCATCCTGTTTACG
TTGTTCGATGATATCATTAACGACATTACCTGAATCTTCATTTCCATCCT
TGTCCATAATCTTCACCAAACGAGCACGTTTTGCATTTTGAATAGCTGAA
TAAATAGTCCAGCAAGTCATGACCAGTTGCATTGCACTCTTCACAAACAA
ATACCAATCGGTTTTTCGGTTGACAAATTTGTCCATATAAAAATACTCCA
AGATAAGCTGAATAGAACCTATGAACAAAAATGTTATGAAGGATTTCATA
TCTTTCATAAAAACATCGTATTGTCCCACTGGACAACAATCACAAGAACA
AAATTGGACCATGATGCTTAACCAGATGAGTGCGTAAATTACATTAGTGA
CGTAAGCGTTTCGGTGAACAACATTATCGAATATTTGACCAGATTCTAAT
TGGTATAGCAAGAAGCAATCCAGGATCACATCCAGAACTTCCAAAGCTTG
TTTAACATACGTCAGACATTTGATTGTTACGAAAGTTTTGAGTGATATGA
ATTTCCACCCTAAATCTTCCACTTTGAAACACCGGCCGATCCCCTGGAAA
CATCTCACAATACAATTCAATTTGATTTTATCTTTATCTCCATTCTCGCT
CTCGTCTTTGATATCAAATTCAACTCGATACATCTCAAATTCTCGGCTAA
TCATANCTCCATTCTCGCTCTCGTCTTTGATATCAAATTCAACTCGATAC
ATCTCAAATTCTTTGCTGATCATTGAATCAGTTCTTTCAAGTTTATGATT
CTTCCTAAATTTGAATAAACGTCTTTCATACTCCATCATGATTTCATGAT
TTTCTCGGACAGCAAATTTACTTCGCCACAATCTGAAGATGAGGACAAGC
AAAGCTACAATTGCTGGCACTATTACCATAGCTTTCAAACCATCCTCACT
ATATCTAGATTCCCATCTTGTTAAATTATTACCACAAAACGTATCATTCC
CAACTGTAATGGGTAGCTTGAAACATTCGAATACAGTATTTTCTGTAGTG
TTGTTTAATGTCGTCATGTTTAATGTAGAACTGTTTCCAAAAGCCATTGT
TGCGTTTCTTAAGCTGTCTTGATATGGAAATGATTCTGATTCTCAACTGT
ATTTTCGAGCTAATTCTTTGCTTTTATGATGACTACCTCTATGCATTATC
ACAGATGATGAAAACCACTTTATTATGCCATTGCATTGATTGGttaataa
tctttttttataCAAACTTTTTATTGTCTTATTGTCTCgggtattttatt
gattttaatcaCTTCACTTTAGTTACGTGCTTGTGCGATGCACTGAAATG
AAACTCATGCTTGAACTCATGTGagaaattgtttattttctG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039087XLOC_039087Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062374-exon-scaffold_364-1491911889:142804..142866TCONS_00062374-exon-scaffold_364-1491911889:142804..142866Clytia hemisphaericaexon
TCONS_00062374-exon-scaffold_364-1510915933:142804..142866TCONS_00062374-exon-scaffold_364-1510915933:142804..142866Clytia hemisphaericaexon
TCONS_00062374-exon-scaffold_364-1575043694:142804..142866TCONS_00062374-exon-scaffold_364-1575043694:142804..142866Clytia hemisphaericaexon
TCONS_00062374-exon-scaffold_364-1491911889:154710..155595TCONS_00062374-exon-scaffold_364-1491911889:154710..155595Clytia hemisphaericaexon
TCONS_00062374-exon-scaffold_364-1510915933:154710..155595TCONS_00062374-exon-scaffold_364-1510915933:154710..155595Clytia hemisphaericaexon
TCONS_00062374-exon-scaffold_364-1575043694:154710..155595TCONS_00062374-exon-scaffold_364-1575043694:154710..155595Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:142804..155595 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0593235	0.387123	0.159532	0.448034	0.601632	0.469102	0.0294787	0	0	0.253602	0	0	0.504762	0	0.4224	0.270416	0	0	0	0.0658237	0	0	0	0.103749	0	0	0	0	0	0.0832038
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top