TCONS_00062360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062360
Unique NameTCONS_00062360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1666

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062360 ID=TCONS_00062360|Name=TCONS_00062360|organism=Clytia hemisphaerica|type=transcript|length=1666bp
AGGGACCACCAGGACCTCAGGGACCTCGTGGACCAGGTCTAGAGTCACCA
AAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCACTAAATC
AAAGACTTTCGAGTGTGTTTTTTACGGGAATCCAATACCAGAAGTCTCTT
GGGAGAGTTCTGCAAAGGATTTTGAAATATCTTCTGTTCCCAACAAAGAG
AAATCCAAAATCAAGACTCAGTTGATCGTCTACAATACAAGTTGGTCTGA
CCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAGCTTCAC
ATTCTGGGGATCTTACCGTGTTGTCTAAACCAATCATtcaaaatcaaaag
actttggTCTTTGTGCCGCAGGGGATCAAATTTAGATTCCCTTCTTGTGA
AGTTCGTTCAAACCCACCAGCCAAAATCACATGGAAACGTATATTTTGGT
CGATGCCTGCAGGACGTTTTGAAGTTCAAGCAAACACTTTGACGATTGGA
AATGTTCAATTTTCTGATGAAGGGTTTTATGCTTGCGAGGCTGAGAACTT
CTTAGGCAAAGATAAAAACACGTTGCAACTCAAAGTGAAAgcttttgaaa
tgcaaaaaacaTCTGTCTCAAGCATTAACATATATCCTAGTGAGATTGCC
AACATCAGTTGTTCGGCTCTTGGAAATGCTGTCAAAATGGACGGGAAAAT
CGCAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTTCGGCAGACA
ATAACACGATTACTGTGACTGCAAGTGTCAAAGAGAAGGGGACCTACGTA
TGCTCAATTTCCAATGCAGAAGAAACGCTTGAAGTCGCTGTCTTAGTAAA
CTATGTCGAGTTCGGTGCATGGAGCAGCTGGTCAAAATGTAATTGTGATG
AAAGCACAACGAAAACAAGAAGTAGAAATTGCCAGAATGAATCTCCAATG
AGAAAGTGTCGTGTTCCGAAAAAGGAAACAACCAGTTGCGCTTGCACATG
CAAAACTGGttggaaaaagaaatcaaacCGTTGTTATGCAGAAATCAAAG
CTAGAAATACATGGAACTTCGCAGAGCTATTTTGCCAAAGCAAAGGTGGA
CATCTTGTAAGCATATCAAATAGTACAGAGAAGGATAACGTCTACCTTAC
TTATCGTGGTACGCCAAATGTCTGGATAGGTTTATCTTTTGAAACCGAAT
GGCAATGGAGTGATGGAAGCAAGGTTGTTTATTATCAtaatcttcaaaag
tcgagatcTGGTAGTGGTAGAAAGAAATGTGTTTCATTCAAGGATGGTGG
AAGCTCGTGGGCTCTCCAAAATTGTGATCAAAGATTTATCTTTGTTTGTG
AAGCATCAATGCAAGACAATCTTCCTATATAGCGCTTGtatatcattttc
atttgaTCTTCTTTGTGTTTTCTACATATTAAGctataatgtttttgttt
tcgcaagatgatttttaattacacagtttttttgttattagaATGTCTTA
ATTTTAGCTGAACCTGGATGTGCTTATCTTTTGACAACTTTTGAgcgtaa
aaatattttattgacgttcttgaaaaaatttacttaaTATACATTTTTAC
CTTGGGTTGTAAGATTTGACCCTCAAGCTAAACAAATCTGCTGCTCAAAT
TTGAAGTTTGAAAGTA
Run BLAST on NCBI

protein sequence of TCONS_00062360-protein

>TCONS_00062360-protein ID=TCONS_00062360-protein|Name=TCONS_00062360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
GPPGPQGPRGPGLESPKLVSNSLNHGLVNITKSKTFECVFYGNPIPEVSW
ESSAKDFEISSVPNKEKSKIKTQLIVYNTSWSDQGPVKCSARSILGEASH
SGDLTVLSKPIIQNQKTLVFVPQGIKFRFPSCEVRSNPPAKITWKRIFWS
MPAGRFEVQANTLTIGNVQFSDEGFYACEAENFLGKDKNTLQLKVKAFEM
QKTSVSSINIYPSEIANISCSALGNAVKMDGKIAKAGAAVDYKVDRSADN
NTITVTASVKEKGTYVCSISNAEETLEVAVLVNYVEFGAWSSWSKCNCDE
STTKTRSRNCQNESPMRKCRVPKKETTSCACTCKTGWKKKSNRCYAEIKA
RNTWNFAELFCQSKGGHLVSISNSTEKDNVYLTYRGTPNVWIGLSFETEW
QWSDGSKVVYYHNLQKSRSGSGRKKCVSFKDGGSSWALQNCDQRFIFVCE
ASMQDNLPI
Run BLAST on NCBI

transcript from alignment at scaffold_363:223459..228048-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062360 ID=TCONS_00062360|Name=TCONS_00062360|organism=Clytia hemisphaerica|type=transcript|length=4590bp|location=Sequence derived from alignment at scaffold_363:223459..228048- (Clytia hemisphaerica)
AGGGACCACCAGGACCTCAGGGACCTCGTGGACCAGGTCTAGAGTCACCA
AAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCACTAAATC
AAAGACTTTCGAGTGTGTTTTTTACGGGAATCCAATACCAGAAGTCTCTT
GGGAGAGTTCTGCAAAGGATTTTGAAATATCTTCTGTTCCCAACAAAGAG
AAATCCAAAATCAAGACTCAGTTGATCGTCTACAATACAAGTTGGTCTGA
CCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAGCTTCAC
ATTCTGGGGATCTTACCGTGTTGTGTAAGTCTCTTGTATTATTTTACTTC
CTATTCTCTCTTCCTGCGCGAATGCAATGCTAAAGCTGAGCTACAGTCCA
ACCTCTAATTTGCAGACACTATTAAAGAGGTAAAAAAGTGTCCACTTTTT
ACATACTAGCCGTCTTTTAGTGTTTTTTAGTGGTTAATTTGAATTTTTAC
TGTAATAGAACTATAACATAAGAGATATTGTGGATGCGTTAGAATTTAGT
AAGCCAAACATAGGCGTAGCGAGATACCCCGCATAACTTATGAGGGAGTG
CAGACGGGTTTATGACATATTCATTATCTTTTGATAAAACAACGACAATA
ATTACAGTGTCTTAAACCGCTACGCCTATGCCAATAGTTAGTCAAGAAAA
TTTCATGTAAAATATCTTATTCTATTTTGTCGAGTTGTAGCAAGTTCTGA
GGCTGATTTTCGTAACTATAGATTCATTCAAGGAGCGCCCTACCACCACT
ACGAACTAACTTCCCAGTTCTCCTCAAATGACATAGGTTGACCAGCACGA
AGGTTCGTTCACTTGCCAAGTGCCGCTGCATTTGCCTATGTGGCAACCAA
GGTTAATGACCACTATACTACAGCGCCATTTTCATTTATATGTATCTTTC
TTTTACCAGCTAAACCAATCATTCAAAATCAAAAGACTTTGGTCTTTGTG
CCGCAGGGGATCAAATTTAGATTCCCTTCTTGTGAAGTTCGTTCAAACCC
ACCAGCCAAAATCACATGGAAACGTATATTTTGGTCGATGCCTGCAGGAC
GTTTTGAAGTTCAAGCAAACACTTTGACGATTGGAAATGTTCAATTTTCT
GATGAAGGGTTTTATGCTTGCGAGGCTGAGAACTTCTTAGGTAGGTCAAT
TAGTGATCCCAGCTGGCACACAACGTTTGTCTAACGTTCATAACGTCCAT
ATAACCACTTGTTTCTATGACAACGAAATAAAGCATGCTTTAATTTTCCA
GTGTGACCCCCTCTCATAGGCCGTTATTAGGGTGTATTCTGTTTTCTGTT
AGAGAGACTACACTATATTTTATCATGTTGAATCAAGACACACATTCAGG
GTCGTTATTAGGGGCGTCATCATGGCGTTCTAAATTCGCCTTTGGCGTCA
TCTGTTTTCTTTTAGGCAAAGATAAAAACACGTTGCAACTCAAAGTGAAA
GCTTTTGAAATGCAAAAAACATCTGTCTCAAGCATTAACATATATCCTAG
TGAGATTGCCAACATCAGTTGTTCGGCTCTTGGAAATGCTGTCAAAATGG
ACGGGAAAATCGCAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGT
TCGGCAGACAATAACACGATTACTGTGACTGCAAGTGTCAAAGAGAAGGG
GACCTACGTATGCTCAATTTCCAATGCAGAAGAAACGCTTGAAGTCGCTG
TCTTAGTAAACTATGTCGGTAAGTTTGATTCGTATCTTAAATATTGTCAG
ACTCAAAATTCTTAAATATTGTGATTGAGTTTATATAAAAGCCTCACAAA
ACTGCGAAAAAAATTGAATATTAGTGAATCACACATTAGTGAATCTGGAA
AACCAGACTTAAAATGATGTCCAACGCCAGAAGTTTTTGAGACCTCAAAT
TCAAACCCAGTGAAATTTTTCTTTTTTCATAGCCAAATTTCAAAACGGGT
CACTGAGACAGGGATGTGGTAGTACCACTCCAAATTTGGACACTGTGCCA
ATTGATATACAAATTATCTGTTATAGAGTTCGGTGCATGGAGCAGCTGGT
CAAAATGTAATTGTGATGAAAGCACAACGAAAACAAGAAGTAGAAATTGC
CAGAATGAATCTCCAATGAGAAAGTGTCGTGTTCCGAAAAAGGAAACAAC
CAGTTGCGCTTGCAGTAAGCGAGTTGAAGTAGTTGACACTCAACCTGAGA
CGACTTAGAATCTTTAAAAATATAGGAGAGTCCTTTTAGCAACGCTTTTT
TTTAATTTTCTAAAATAATGTCTCCAGCATTAACTTTTCAGTTCACAGTT
CACCTACTCTCTCGTATAAACTTAGTTTAAAACACATTTTTAATGTGTTA
AAATTTTTGTATTTATGTACTCATGAAAAGATAATTACTTTGTAATAAAT
CTCCGGGAGGGGTGGTACTTAGGCAAATGGAGAGCACAAAATCTTTTTCC
TCGATTTTAGACCCTGAAATTTCCGATTCCGGGATAAATTAGCTTTGTGC
TTATCTATACTACTGCATGAGTATATTAGAAACTGTGTCGAAAATACTTT
ACGATTTTATTTCATGTTTCTTTTTCGTCAAAACAGCATGCAAAACTGGT
TGGAAAAAGAAATCAAACCGTTGTTATGCAGAAATCAAAGCTAGAAATAC
ATGGAACTTCGCAGAGCTATTTTGCCAAAGCAAAGGTGGACATCTTGTAA
GCATATCAAATAGTACAGAGAAGGATAACGTCTACCTTACTTATCGTGGT
ACGCCAAATGTCTGGATAGGTATGTATTTCATCATCCGTATTGAAATCAG
AGGGTAGGACTAATGTAGAAACCGCCCTAGAGGCGTGTCCATGTATCGTG
GGTTCCATACATTGAAAATAGAATTTACGAAGCAATGGGCTTTTCCAGAA
AAAAACCGTACACCCCCTGTTGAGGAGGTCCAACCTTTTGTATGAGCTAC
CCCTGGAATTCCAACTTAAGATATTGTACCCCCCTTGGAATTCCAAGAAA
CTTAGGGGTCAAAACCCTCTAGAATTCCGAATTTTTATGAGGTTTTTAAA
CAATACCCCATGGAATTCCGCTTATTTTTAATGGATTTTTGTAAACCCCT
ATGGAATTCCGCAACATTTCAAACCTTACCCCCTAGGAACGGAAGTTGAC
CTCCTCAACAGGGGGTGTACGGTTTTTTTCTGGGAAAGCCCAATTCGCTC
AGATATTTTCTTATAGCATACATATATATTCCATCTGTAAGGAACCATAA
GTTCATCAAATTATATAAAGATTACGGAAAGCGTTTTGGTCAGCCTAAGG
GCTCTAATCATAGTGAACTTTTAATATTTGCCACGTACAAACTATAAATT
TCTACTTGATGTAGCACATCAAAAGACTTTGACATGTTATACATTTTATA
TTAGGCCAATTATCCTCGAGTCTGAAAATTTAAGAATTGCAATGAAAAAA
AATTGATGAAGAAGAGTATTTCAACTTTGAAGAGCTAATTTCTGTGAAAG
TAATATTTTGAAAAGTCTTTTGCGGTAGATGGTGTATCTTTTGCCGCACT
AAAAATATATTTTCTGAAAATTTTTCTAAAAGCTTATTTGTCTCAAAATC
TTGAAAATAGTGTTTTTTTGACCGATTTTTCATCCCAATTTTTGATTGAA
AAATAGCCATAACTTTTGATGCATTAATTTAGAAAAGTTTTCCACAGTTT
TTAATTTAAAACAGTTCAATTCTTTGCGGACAGTTTGGAAAAACTGGGAA
TTACCCATTAAAACTTAGCACTTTTTATAAAAGAAGGTATAAATGCAACA
TATTATTAACGTCTTTTTAAAGTTCATAGCGTCATTTTTGAAATTAAATT
CTTAATTACTCTTAAGGGATTTGATTAAAAATTGATTTATAAAGGCAATT
CTTTGTTAAAAGTGTTAGAGAACCTAAGACATAGCTTTTATGTCCAAATA
CTAAAATCAATTTTTCGACTATAGTTCGAATTATACAGAAATACAAGGTT
CAAAATACAGAGATTAATTAGACTTAATTATTTTTCAAAATTTTACGTTT
AAGGTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCAAGGTT
GTTTATTATCATAATCTTCAAAAGTCGAGATCTGGTAGTGGTAGAAAGAA
ATGTGTTTCATTCAAGGATGGTGGAAGCTCGTGGGCTCTCCAAAATTGTG
ATCAAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCT
ATATAGCGCTTGTATATCATTTTCATTTGATCTTCTTTGTGTTTTCTACA
TATTAAGCTATAATGTTTTTGTTTTCGCAAGATGATTTTTAATTACACAG
TTTTTTTGTTATTAGAATGTCTTAATTTTAGCTGAACCTGGATGTGCTTA
TCTTTTGACAACTTTTGAGCGTAAAAATATTTTATTGACGTTCTTGAAAA
AATTTACTTAATATACATTTTTACCTTGGGTTGTAAGATTTGACCCTCAA
GCTAAACAAATCTGCTGCTCAAATTTGAAGTTTGAAAGTA

Coding sequence (CDS) from alignment at scaffold_363:223459..228048-

>TCONS_00062360 ID=TCONS_00062360|Name=TCONS_00062360|organism=Clytia hemisphaerica|type=CDS|length=8280bp|location=Sequence derived from alignment at scaffold_363:223459..228048- (Clytia hemisphaerica)
GTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCAAGGTTGTT
TATTATCATAATCTTCAAAAGTCGAGATCTGGTAGTGGTAGAAAGAAATG
TGTTTCATTCAAGGATGGTGGAAGCTCGTGGGCTCTCCAAAATTGTGATC
AAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCTATA
TAGCATGCAAAACTGGTTGGAAAAAGAAATCAAACCGTTGTTATGCAGAA
ATCAAAGCTAGAAATACATGGAACTTCGCAGAGCTATTTTGCCAAAGCAA
AGGTGGACATCTTGTAAGCATATCAAATAGTACAGAGAAGGATAACGTCT
ACCTTACTTATCGTGGTACGCCAAATGTCTGGATAGAGTTCGGTGCATGG
AGCAGCTGGTCAAAATGTAATTGTGATGAAAGCACAACGAAAACAAGAAG
TAGAAATTGCCAGAATGAATCTCCAATGAGAAAGTGTCGTGTTCCGAAAA
AGGAAACAACCAGTTGCGCTTGCAGCAAAGATAAAAACACGTTGCAACTC
AAAGTGAAAGCTTTTGAAATGCAAAAAACATCTGTCTCAAGCATTAACAT
ATATCCTAGTGAGATTGCCAACATCAGTTGTTCGGCTCTTGGAAATGCTG
TCAAAATGGACGGGAAAATCGCAAAGGCAGGAGCTGCAGTGGACTATAAG
GTAGATCGTTCGGCAGACAATAACACGATTACTGTGACTGCAAGTGTCAA
AGAGAAGGGGACCTACGTATGCTCAATTTCCAATGCAGAAGAAACGCTTG
AAGTCGCTGTCTTAGTAAACTATGTCGCTAAACCAATCATTCAAAATCAA
AAGACTTTGGTCTTTGTGCCGCAGGGGATCAAATTTAGATTCCCTTCTTG
TGAAGTTCGTTCAAACCCACCAGCCAAAATCACATGGAAACGTATATTTT
GGTCGATGCCTGCAGGACGTTTTGAAGTTCAAGCAAACACTTTGACGATT
GGAAATGTTCAATTTTCTGATGAAGGGTTTTATGCTTGCGAGGCTGAGAA
CTTCTTAGGGACCACCAGGACCTCAGGGACCTCGTGGACCAGGTCTAGAG
TCACCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCAC
TAAATCAAAGACTTTCGAGTGTGTTTTTTACGGGAATCCAATACCAGAAG
TCTCTTGGGAGAGTTCTGCAAAGGATTTTGAAATATCTTCTGTTCCCAAC
AAAGAGAAATCCAAAATCAAGACTCAGTTGATCGTCTACAATACAAGTTG
GTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAG
CTTCACATTCTGGGGATCTTACCGTGTTGTGTTTATCTTTTGAAACCGAA
TGGCAATGGAGTGATGGAAGCAAGGTTGTTTATTATCATAATCTTCAAAA
GTCGAGATCTGGTAGTGGTAGAAAGAAATGTGTTTCATTCAAGGATGGTG
GAAGCTCGTGGGCTCTCCAAAATTGTGATCAAAGATTTATCTTTGTTTGT
GAAGCATCAATGCAAGACAATCTTCCTATATAGCATGCAAAACTGGTTGG
AAAAAGAAATCAAACCGTTGTTATGCAGAAATCAAAGCTAGAAATACATG
GAACTTCGCAGAGCTATTTTGCCAAAGCAAAGGTGGACATCTTGTAAGCA
TATCAAATAGTACAGAGAAGGATAACGTCTACCTTACTTATCGTGGTACG
CCAAATGTCTGGATAGAGTTCGGTGCATGGAGCAGCTGGTCAAAATGTAA
TTGTGATGAAAGCACAACGAAAACAAGAAGTAGAAATTGCCAGAATGAAT
CTCCAATGAGAAAGTGTCGTGTTCCGAAAAAGGAAACAACCAGTTGCGCT
TGCAGCAAAGATAAAAACACGTTGCAACTCAAAGTGAAAGCTTTTGAAAT
GCAAAAAACATCTGTCTCAAGCATTAACATATATCCTAGTGAGATTGCCA
ACATCAGTTGTTCGGCTCTTGGAAATGCTGTCAAAATGGACGGGAAAATC
GCAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTTCGGCAGACAA
TAACACGATTACTGTGACTGCAAGTGTCAAAGAGAAGGGGACCTACGTAT
GCTCAATTTCCAATGCAGAAGAAACGCTTGAAGTCGCTGTCTTAGTAAAC
TATGTCGCTAAACCAATCATTCAAAATCAAAAGACTTTGGTCTTTGTGCC
GCAGGGGATCAAATTTAGATTCCCTTCTTGTGAAGTTCGTTCAAACCCAC
CAGCCAAAATCACATGGAAACGTATATTTTGGTCGATGCCTGCAGGACGT
TTTGAAGTTCAAGCAAACACTTTGACGATTGGAAATGTTCAATTTTCTGA
TGAAGGGTTTTATGCTTGCGAGGCTGAGAACTTCTTAGGGACCACCAGGA
CCTCAGGGACCTCGTGGACCAGGTCTAGAGTCACCAAAACTTGTTTCAAA
TTCCTTGAATCATGGATTAGTTAATATCACTAAATCAAAGACTTTCGAGT
GTGTTTTTTACGGGAATCCAATACCAGAAGTCTCTTGGGAGAGTTCTGCA
AAGGATTTTGAAATATCTTCTGTTCCCAACAAAGAGAAATCCAAAATCAA
GACTCAGTTGATCGTCTACAATACAAGTTGGTCTGACCAAGGTCCTGTCA
AATGTTCAGCTAGAAGTATCCTTGGTGAAGCTTCACATTCTGGGGATCTT
ACCGTGTTGTGTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAG
CAAGGTTGTTTATTATCATAATCTTCAAAAGTCGAGATCTGGTAGTGGTA
GAAAGAAATGTGTTTCATTCAAGGATGGTGGAAGCTCGTGGGCTCTCCAA
AATTGTGATCAAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAA
TCTTCCTATATAGCATGCAAAACTGGTTGGAAAAAGAAATCAAACCGTTG
TTATGCAGAAATCAAAGCTAGAAATACATGGAACTTCGCAGAGCTATTTT
GCCAAAGCAAAGGTGGACATCTTGTAAGCATATCAAATAGTACAGAGAAG
GATAACGTCTACCTTACTTATCGTGGTACGCCAAATGTCTGGATAGAGTT
CGGTGCATGGAGCAGCTGGTCAAAATGTAATTGTGATGAAAGCACAACGA
AAACAAGAAGTAGAAATTGCCAGAATGAATCTCCAATGAGAAAGTGTCGT
GTTCCGAAAAAGGAAACAACCAGTTGCGCTTGCAGCAAAGATAAAAACAC
GTTGCAACTCAAAGTGAAAGCTTTTGAAATGCAAAAAACATCTGTCTCAA
GCATTAACATATATCCTAGTGAGATTGCCAACATCAGTTGTTCGGCTCTT
GGAAATGCTGTCAAAATGGACGGGAAAATCGCAAAGGCAGGAGCTGCAGT
GGACTATAAGGTAGATCGTTCGGCAGACAATAACACGATTACTGTGACTG
CAAGTGTCAAAGAGAAGGGGACCTACGTATGCTCAATTTCCAATGCAGAA
GAAACGCTTGAAGTCGCTGTCTTAGTAAACTATGTCGCTAAACCAATCAT
TCAAAATCAAAAGACTTTGGTCTTTGTGCCGCAGGGGATCAAATTTAGAT
TCCCTTCTTGTGAAGTTCGTTCAAACCCACCAGCCAAAATCACATGGAAA
CGTATATTTTGGTCGATGCCTGCAGGACGTTTTGAAGTTCAAGCAAACAC
TTTGACGATTGGAAATGTTCAATTTTCTGATGAAGGGTTTTATGCTTGCG
AGGCTGAGAACTTCTTAGGGACCACCAGGACCTCAGGGACCTCGTGGACC
AGGTCTAGAGTCACCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAG
TTAATATCACTAAATCAAAGACTTTCGAGTGTGTTTTTTACGGGAATCCA
ATACCAGAAGTCTCTTGGGAGAGTTCTGCAAAGGATTTTGAAATATCTTC
TGTTCCCAACAAAGAGAAATCCAAAATCAAGACTCAGTTGATCGTCTACA
ATACAAGTTGGTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATC
CTTGGTGAAGCTTCACATTCTGGGGATCTTACCGTGTTGTGTTTATCTTT
TGAAACCGAATGGCAATGGAGTGATGGAAGCAAGGTTGTTTATTATCATA
ATCTTCAAAAGTCGAGATCTGGTAGTGGTAGAAAGAAATGTGTTTCATTC
AAGGATGGTGGAAGCTCGTGGGCTCTCCAAAATTGTGATCAAAGATTTAT
CTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCTATATAGCATGCAA
AACTGGTTGGAAAAAGAAATCAAACCGTTGTTATGCAGAAATCAAAGCTA
GAAATACATGGAACTTCGCAGAGCTATTTTGCCAAAGCAAAGGTGGACAT
CTTGTAAGCATATCAAATAGTACAGAGAAGGATAACGTCTACCTTACTTA
TCGTGGTACGCCAAATGTCTGGATAGAGTTCGGTGCATGGAGCAGCTGGT
CAAAATGTAATTGTGATGAAAGCACAACGAAAACAAGAAGTAGAAATTGC
CAGAATGAATCTCCAATGAGAAAGTGTCGTGTTCCGAAAAAGGAAACAAC
CAGTTGCGCTTGCAGCAAAGATAAAAACACGTTGCAACTCAAAGTGAAAG
CTTTTGAAATGCAAAAAACATCTGTCTCAAGCATTAACATATATCCTAGT
GAGATTGCCAACATCAGTTGTTCGGCTCTTGGAAATGCTGTCAAAATGGA
CGGGAAAATCGCAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTT
CGGCAGACAATAACACGATTACTGTGACTGCAAGTGTCAAAGAGAAGGGG
ACCTACGTATGCTCAATTTCCAATGCAGAAGAAACGCTTGAAGTCGCTGT
CTTAGTAAACTATGTCGCTAAACCAATCATTCAAAATCAAAAGACTTTGG
TCTTTGTGCCGCAGGGGATCAAATTTAGATTCCCTTCTTGTGAAGTTCGT
TCAAACCCACCAGCCAAAATCACATGGAAACGTATATTTTGGTCGATGCC
TGCAGGACGTTTTGAAGTTCAAGCAAACACTTTGACGATTGGAAATGTTC
AATTTTCTGATGAAGGGTTTTATGCTTGCGAGGCTGAGAACTTCTTAGGG
ACCACCAGGACCTCAGGGACCTCGTGGACCAGGTCTAGAGTCACCAAAAC
TTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCACTAAATCAAAG
ACTTTCGAGTGTGTTTTTTACGGGAATCCAATACCAGAAGTCTCTTGGGA
GAGTTCTGCAAAGGATTTTGAAATATCTTCTGTTCCCAACAAAGAGAAAT
CCAAAATCAAGACTCAGTTGATCGTCTACAATACAAGTTGGTCTGACCAA
GGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAGCTTCACATTC
TGGGGATCTTACCGTGTTGTGTTTATCTTTTGAAACCGAATGGCAATGGA
GTGATGGAAGCAAGGTTGTTTATTATCATAATCTTCAAAAGTCGAGATCT
GGTAGTGGTAGAAAGAAATGTGTTTCATTCAAGGATGGTGGAAGCTCGTG
GGCTCTCCAAAATTGTGATCAAAGATTTATCTTTGTTTGTGAAGCATCAA
TGCAAGACAATCTTCCTATATAGCATGCAAAACTGGTTGGAAAAAGAAAT
CAAACCGTTGTTATGCAGAAATCAAAGCTAGAAATACATGGAACTTCGCA
GAGCTATTTTGCCAAAGCAAAGGTGGACATCTTGTAAGCATATCAAATAG
TACAGAGAAGGATAACGTCTACCTTACTTATCGTGGTACGCCAAATGTCT
GGATAGAGTTCGGTGCATGGAGCAGCTGGTCAAAATGTAATTGTGATGAA
AGCACAACGAAAACAAGAAGTAGAAATTGCCAGAATGAATCTCCAATGAG
AAAGTGTCGTGTTCCGAAAAAGGAAACAACCAGTTGCGCTTGCAGCAAAG
ATAAAAACACGTTGCAACTCAAAGTGAAAGCTTTTGAAATGCAAAAAACA
TCTGTCTCAAGCATTAACATATATCCTAGTGAGATTGCCAACATCAGTTG
TTCGGCTCTTGGAAATGCTGTCAAAATGGACGGGAAAATCGCAAAGGCAG
GAGCTGCAGTGGACTATAAGGTAGATCGTTCGGCAGACAATAACACGATT
ACTGTGACTGCAAGTGTCAAAGAGAAGGGGACCTACGTATGCTCAATTTC
CAATGCAGAAGAAACGCTTGAAGTCGCTGTCTTAGTAAACTATGTCGCTA
AACCAATCATTCAAAATCAAAAGACTTTGGTCTTTGTGCCGCAGGGGATC
AAATTTAGATTCCCTTCTTGTGAAGTTCGTTCAAACCCACCAGCCAAAAT
CACATGGAAACGTATATTTTGGTCGATGCCTGCAGGACGTTTTGAAGTTC
AAGCAAACACTTTGACGATTGGAAATGTTCAATTTTCTGATGAAGGGTTT
TATGCTTGCGAGGCTGAGAACTTCTTAGGGACCACCAGGACCTCAGGGAC
CTCGTGGACCAGGTCTAGAGTCACCAAAACTTGTTTCAAATTCCTTGAAT
CATGGATTAGTTAATATCACTAAATCAAAGACTTTCGAGTGTGTTTTTTA
CGGGAATCCAATACCAGAAGTCTCTTGGGAGAGTTCTGCAAAGGATTTTG
AAATATCTTCTGTTCCCAACAAAGAGAAATCCAAAATCAAGACTCAGTTG
ATCGTCTACAATACAAGTTGGTCTGACCAAGGTCCTGTCAAATGTTCAGC
TAGAAGTATCCTTGGTGAAGCTTCACATTCTGGGGATCTTACCGTGTTGT
GTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCAAGGTTGTT
TATTATCATAATCTTCAAAAGTCGAGATCTGGTAGTGGTAGAAAGAAATG
TGTTTCATTCAAGGATGGTGGAAGCTCGTGGGCTCTCCAAAATTGTGATC
AAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCTATA
TAGCATGCAAAACTGGTTGGAAAAAGAAATCAAACCGTTGTTATGCAGAA
ATCAAAGCTAGAAATACATGGAACTTCGCAGAGCTATTTTGCCAAAGCAA
AGGTGGACATCTTGTAAGCATATCAAATAGTACAGAGAAGGATAACGTCT
ACCTTACTTATCGTGGTACGCCAAATGTCTGGATAGAGTTCGGTGCATGG
AGCAGCTGGTCAAAATGTAATTGTGATGAAAGCACAACGAAAACAAGAAG
TAGAAATTGCCAGAATGAATCTCCAATGAGAAAGTGTCGTGTTCCGAAAA
AGGAAACAACCAGTTGCGCTTGCAGCAAAGATAAAAACACGTTGCAACTC
AAAGTGAAAGCTTTTGAAATGCAAAAAACATCTGTCTCAAGCATTAACAT
ATATCCTAGTGAGATTGCCAACATCAGTTGTTCGGCTCTTGGAAATGCTG
TCAAAATGGACGGGAAAATCGCAAAGGCAGGAGCTGCAGTGGACTATAAG
GTAGATCGTTCGGCAGACAATAACACGATTACTGTGACTGCAAGTGTCAA
AGAGAAGGGGACCTACGTATGCTCAATTTCCAATGCAGAAGAAACGCTTG
AAGTCGCTGTCTTAGTAAACTATGTCGCTAAACCAATCATTCAAAATCAA
AAGACTTTGGTCTTTGTGCCGCAGGGGATCAAATTTAGATTCCCTTCTTG
TGAAGTTCGTTCAAACCCACCAGCCAAAATCACATGGAAACGTATATTTT
GGTCGATGCCTGCAGGACGTTTTGAAGTTCAAGCAAACACTTTGACGATT
GGAAATGTTCAATTTTCTGATGAAGGGTTTTATGCTTGCGAGGCTGAGAA
CTTCTTAGGGACCACCAGGACCTCAGGGACCTCGTGGACCAGGTCTAGAG
TCACCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCAC
TAAATCAAAGACTTTCGAGTGTGTTTTTTACGGGAATCCAATACCAGAAG
TCTCTTGGGAGAGTTCTGCAAAGGATTTTGAAATATCTTCTGTTCCCAAC
AAAGAGAAATCCAAAATCAAGACTCAGTTGATCGTCTACAATACAAGTTG
GTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAG
CTTCACATTCTGGGGATCTTACCGTGTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039074XLOC_039074Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062360-proteinTCONS_00062360-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062360-exon-scaffold_363-1575043694:227725..228048TCONS_00062360-exon-scaffold_363-1575043694:227725..228048Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1575043694:226859..227089TCONS_00062360-exon-scaffold_363-1575043694:226859..227089Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1575043694:226281..226583TCONS_00062360-exon-scaffold_363-1575043694:226281..226583Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1575043694:225835..225972TCONS_00062360-exon-scaffold_363-1575043694:225835..225972Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1575043694:225230..225412TCONS_00062360-exon-scaffold_363-1575043694:225230..225412Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1575043694:223459..223945TCONS_00062360-exon-scaffold_363-1575043694:223459..223945Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:227725..228048TCONS_00062360-exon-scaffold_363-1510915933:227725..228048Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:226859..227089TCONS_00062360-exon-scaffold_363-1510915933:226859..227089Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:226281..226583TCONS_00062360-exon-scaffold_363-1510915933:226281..226583Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:225835..225972TCONS_00062360-exon-scaffold_363-1510915933:225835..225972Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:225230..225412TCONS_00062360-exon-scaffold_363-1510915933:225230..225412Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1510915933:223459..223945TCONS_00062360-exon-scaffold_363-1510915933:223459..223945Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:227725..228048TCONS_00062360-exon-scaffold_363-1491911889:227725..228048Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:226859..227089TCONS_00062360-exon-scaffold_363-1491911889:226859..227089Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:226281..226583TCONS_00062360-exon-scaffold_363-1491911889:226281..226583Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:225835..225972TCONS_00062360-exon-scaffold_363-1491911889:225835..225972Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:225230..225412TCONS_00062360-exon-scaffold_363-1491911889:225230..225412Clytia hemisphaericaexon
TCONS_00062360-exon-scaffold_363-1491911889:223459..223945TCONS_00062360-exon-scaffold_363-1491911889:223459..223945Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:223459..228048 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.115091	0.0255676	0.0315146	0	4.19568	5.45132	6.92743	10.8151	8.79997	6.31862	7.50988	9.08388	19.9422	21.4133	9.97638	12.4286	1.03011	1.08869	0.495718	1.04695	0.34829	0.363435	4.13095	4.36479	15.8878	39.7604	2.0692	4.32098	23.8238	28.4833
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR001304C-type_lectin-like
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR016186C-type_lectin-like/link
IPR007110Ig-like_dom
IPR000884TSP1_rpt
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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