TCONS_00062360-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062360-protein
Unique NameTCONS_00062360-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length459

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062360-protein ID=TCONS_00062360-protein|Name=TCONS_00062360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
GPPGPQGPRGPGLESPKLVSNSLNHGLVNITKSKTFECVFYGNPIPEVSW
ESSAKDFEISSVPNKEKSKIKTQLIVYNTSWSDQGPVKCSARSILGEASH
SGDLTVLSKPIIQNQKTLVFVPQGIKFRFPSCEVRSNPPAKITWKRIFWS
MPAGRFEVQANTLTIGNVQFSDEGFYACEAENFLGKDKNTLQLKVKAFEM
QKTSVSSINIYPSEIANISCSALGNAVKMDGKIAKAGAAVDYKVDRSADN
NTITVTASVKEKGTYVCSISNAEETLEVAVLVNYVEFGAWSSWSKCNCDE
STTKTRSRNCQNESPMRKCRVPKKETTSCACTCKTGWKKKSNRCYAEIKA
RNTWNFAELFCQSKGGHLVSISNSTEKDNVYLTYRGTPNVWIGLSFETEW
QWSDGSKVVYYHNLQKSRSGSGRKKCVSFKDGGSSWALQNCDQRFIFVCE
ASMQDNLPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039074XLOC_039074Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062360TCONS_00062360Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR001304C-type_lectin-like
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR016186C-type_lectin-like/link
IPR007110Ig-like_dom
IPR000884TSP1_rpt
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 122..185
e-value: 0.0032
score: 26.7
coord: 29..96
e-value: 0.71
score: 8.5
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 333..450
e-value: 2.4E-25
score: 100.2
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 352..450
e-value: 1.5E-15
score: 57.7
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 340..450
score: 18.855
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 116..196
e-value: 1.9E-4
score: 30.8
coord: 23..107
e-value: 0.031
score: 23.5
NoneNo IPR availableGENE3D2.30.90.10coord: 286..322
e-value: 0.0016
score: 18.4
NoneNo IPR availableCDDcd00037CLECTcoord: 343..450
e-value: 3.81339E-20
score: 84.5937
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 200..285
e-value: 0.029
score: 13.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 136..199
e-value: 3.9E-13
score: 49.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 13..110
e-value: 4.9E-10
score: 38.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 111..135
e-value: 0.15
score: 11.5
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 119..195
e-value: 1.3E-9
score: 37.9
coord: 24..106
e-value: 2.1E-8
score: 34.0
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 323..456
e-value: 2.6E-27
score: 94.9
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 110..196
score: 9.791
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 16..105
score: 9.5
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 23..111
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 131..198
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 285..332
score: 8.488
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 324..450

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062360-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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