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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062264 ID=TCONS_00062264|Name=TCONS_00062264|organism=Clytia hemisphaerica|type=transcript|length=2585bp
CTACCATGGAATCGTCTAAGTGTTAAGCTCGACCAAAAGTAAGATAGGGA
TCGATAAAACAATAAAACCAAAagaaatactaacaaaaaatatcaaaaaa
agtaaaaatataaaGATAAAGTTTTCTGTTGTTCAAAAGAGGTCAAAATA
TGTACATGTGTCAAGTTCAAGAAAGGTTCTAATACTAGGCATCAATTTGT
ATCTCCAAGAAGTCTTGAAGAGGAAATATCTCCGCCAtgttcttttttct
caatttctgcAGCTCTGGGTTGTTCACCAATGTATATGCTAAAAACCATC
TGTTTCGAGCTCGTTTGTTATTCTGATAAGGGTCGATGATTTGAAGCAAT
CGGTCAGAAACTTGTATCTTCGGTCTCCCTAAACAGTCACGCGTTTGCTC
CTGTGTTGTGAGATTTGACGCATGCGCGGTACGTGGTTCCAAAAGCATTT
GACAGAAACATCTCATGACTGgacttttgaaaacattttctacTCGTAAG
AAAGATGCATAGGTTTTGGATAAATCGAAACTCCTGAAAAATACCAACGG
GTTGCGATCAATGCGGCCGTAGNTACCTATAATTTGAAATTACTCTACCA
TAGAATCGTTTAAACGAAAAGTACGATAGGGATCGATAAAACAATAAAGC
CAAAagaaatactaacaaaaaataccaagaaaagtaaaaatataaaGATA
AAGTTTTCTACTGTTCAAAAGAGGTCAAAATATGTACATGTGTCAAGTTC
GAGAAAGGTTCTTATACTAGGCATCAATTTCTATCTCCAAGAAGTCTTGA
AGAGGAAATATCTCCGCCAtgttcttttttctcaatttctgcAGCCCTGG
GTTGTTCACCAATGTATATGCTAAAAACCATCTGTTTCGAGCTCGTTTGT
TATTCTGATAAGGGTCAATGATTTGAAGCAATCGGTCAGAAACTTGTATT
TTCGGTCTCCCCAAAGAGTCACGTGTTTGTTCCTGTGTTATGAGATTTGA
CGCATGCGCGGTGCGAGGTTCCAAAAGCATTTGACAGAAACATCTCATga
ctggatttttgaaaacattttctacTCGTAAGATGCGTAGGTTTTGGATA
AATCGAAACTCCTAAAAAATACCAACGGGTTGCGATCGATGCGGCCGTAA
AAGAATAAAAAGCTGACCACCAATAACAGCAAACGTTTAGCTAGCGATTT
GATACTTGTTAAAATGTTAGCAAATAGTAGGAAAAACTTGAGTACAAAAA
ACAGGCTTGgatatttcaaattgatgtgCGTTTTCGAGTGTTCTAAATCA
GTTAAAGCATAACGTATGATTAACCTTTGTGTCAAAATGAAGACAAATCC
AGCACCAAAAATCGATAAACAGATCCGGAATAGCATCAGCACCTGACTGC
CTTCCAAATGTGCTAACCCGTAAATGGTTATAGTTACTATAGCAACGAAC
ACATAACAAAAGCCAAATCCAACAACCATAAAACTGATTAAATAAGCCGG
GAACACCATATGATGATATAAAGCAGCATTGTAATTCTTGTCAGTTTTCT
TGTAAAGTTTCTGTGTCCCGTTATAAATGGAGAATGAATCTCCTTGGACA
CAATACAAAAAGTGAACTCCCATAACAATGTAGGCAATGATGGATAAAAT
TAGTGTGCCATACCAGAGAGCCTTGAGAGAGATATCGTCTGTGGATTTTA
GTAAGAAATGGTACATGCGGACTTGACCAAAAGCAATGAAGAAGTATAAT
AATACACCAATCACAACCATGCATTGCCAGATCTCACTAGGGAATTTATA
CCAAGGTTTAAAAGctgtttttagtttttgaacAATGGTTTGTTTCGGCT
TTGGATATCTGTTTTTGATCAGTTTTTGAAGATGTAAGATTTGGTGTTTA
GCTACGACGCTATTTTCAACGCTTGGTAACTCGTAACATCTAGTTTTAAG
ACATGCGTTTAATCTGCTTGCAAACCCAAAGTAAATgaaactcaaaaaca
caaaagCTGGGGTGAAAATAATCGCAGTGCTGTTCACAACTTGATCGTCC
TCCTGAACTAAATCACTCTTgcaattaaaatgaaattgcaaTCCTGTCTT
GACGATTTCCCAAACAGTGTAAAAGATACCAAGAATCGACGCGACTAATA
AATGTTTTGATGAGATGAGTGCGAATAGTGGGTATGATGTGAAAGCAACC
AGTGTTGACATGAGGATTTGCATGAAAAAGGAACAAAGATAACTCTCAGG
TCCCTTAATACTAGAGCACGTGTTTTTGGCGGATGGATCTTTGTGAATAA
TGATTTCCAAAATGTTTTGCGATAAAAACCCATAAGTTACGGTTGTTAAG
AGGCGGTTACGATCGTTGTCTTGGAGAAACATAAACGGTGGCTGTATTGT
GAACTTAGAGTTTTTCCATGCTGAATGGAGATTTAAGATTGCGAGCACCA
GTGCAGGAAGTAAATACCAGAGTACTgttaaaaatgttgttttttcgaTT
GCACGATCACAAGCCATGGCGAAAGTCTGCGAAATCACTTCTTCACTCTG
CTCAACTTTGCAAAGACACAACTTGTTTCTCATTT Run BLAST on NCBI transcript from alignment at scaffold_362:581634..584218- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062264 ID=TCONS_00062264|Name=TCONS_00062264|organism=Clytia hemisphaerica|type=transcript|length=2585bp|location=Sequence derived from alignment at scaffold_362:581634..584218- (Clytia hemisphaerica)
CTACCATGGAATCGTCTAAGTGTTAAGCTCGACCAAAAGTAAGATAGGGA
TCGATAAAACAATAAAACCAAAAGAAATACTAACAAAAAATATCAAAAAA
AGTAAAAATATAAAGATAAAGTTTTCTGTTGTTCAAAAGAGGTCAAAATA
TGTACATGTGTCAAGTTCAAGAAAGGTTCTAATACTAGGCATCAATTTGT
ATCTCCAAGAAGTCTTGAAGAGGAAATATCTCCGCCATGTTCTTTTTTCT
CAATTTCTGCAGCTCTGGGTTGTTCACCAATGTATATGCTAAAAACCATC
TGTTTCGAGCTCGTTTGTTATTCTGATAAGGGTCGATGATTTGAAGCAAT
CGGTCAGAAACTTGTATCTTCGGTCTCCCTAAACAGTCACGCGTTTGCTC
CTGTGTTGTGAGATTTGACGCATGCGCGGTACGTGGTTCCAAAAGCATTT
GACAGAAACATCTCATGACTGGACTTTTGAAAACATTTTCTACTCGTAAG
AAAGATGCATAGGTTTTGGATAAATCGAAACTCCTGAAAAATACCAACGG
GTTGCGATCAATGCGGCCGTAGNTACCTATAATTTGAAATTACTCTACCA
TAGAATCGTTTAAACGAAAAGTACGATAGGGATCGATAAAACAATAAAGC
CAAAAGAAATACTAACAAAAAATACCAAGAAAAGTAAAAATATAAAGATA
AAGTTTTCTACTGTTCAAAAGAGGTCAAAATATGTACATGTGTCAAGTTC
GAGAAAGGTTCTTATACTAGGCATCAATTTCTATCTCCAAGAAGTCTTGA
AGAGGAAATATCTCCGCCATGTTCTTTTTTCTCAATTTCTGCAGCCCTGG
GTTGTTCACCAATGTATATGCTAAAAACCATCTGTTTCGAGCTCGTTTGT
TATTCTGATAAGGGTCAATGATTTGAAGCAATCGGTCAGAAACTTGTATT
TTCGGTCTCCCCAAAGAGTCACGTGTTTGTTCCTGTGTTATGAGATTTGA
CGCATGCGCGGTGCGAGGTTCCAAAAGCATTTGACAGAAACATCTCATGA
CTGGATTTTTGAAAACATTTTCTACTCGTAAGATGCGTAGGTTTTGGATA
AATCGAAACTCCTAAAAAATACCAACGGGTTGCGATCGATGCGGCCGTAA
AAGAATAAAAAGCTGACCACCAATAACAGCAAACGTTTAGCTAGCGATTT
GATACTTGTTAAAATGTTAGCAAATAGTAGGAAAAACTTGAGTACAAAAA
ACAGGCTTGGATATTTCAAATTGATGTGCGTTTTCGAGTGTTCTAAATCA
GTTAAAGCATAACGTATGATTAACCTTTGTGTCAAAATGAAGACAAATCC
AGCACCAAAAATCGATAAACAGATCCGGAATAGCATCAGCACCTGACTGC
CTTCCAAATGTGCTAACCCGTAAATGGTTATAGTTACTATAGCAACGAAC
ACATAACAAAAGCCAAATCCAACAACCATAAAACTGATTAAATAAGCCGG
GAACACCATATGATGATATAAAGCAGCATTGTAATTCTTGTCAGTTTTCT
TGTAAAGTTTCTGTGTCCCGTTATAAATGGAGAATGAATCTCCTTGGACA
CAATACAAAAAGTGAACTCCCATAACAATGTAGGCAATGATGGATAAAAT
TAGTGTGCCATACCAGAGAGCCTTGAGAGAGATATCGTCTGTGGATTTTA
GTAAGAAATGGTACATGCGGACTTGACCAAAAGCAATGAAGAAGTATAAT
AATACACCAATCACAACCATGCATTGCCAGATCTCACTAGGGAATTTATA
CCAAGGTTTAAAAGCTGTTTTTAGTTTTTGAACAATGGTTTGTTTCGGCT
TTGGATATCTGTTTTTGATCAGTTTTTGAAGATGTAAGATTTGGTGTTTA
GCTACGACGCTATTTTCAACGCTTGGTAACTCGTAACATCTAGTTTTAAG
ACATGCGTTTAATCTGCTTGCAAACCCAAAGTAAATGAAACTCAAAAACA
CAAAAGCTGGGGTGAAAATAATCGCAGTGCTGTTCACAACTTGATCGTCC
TCCTGAACTAAATCACTCTTGCAATTAAAATGAAATTGCAATCCTGTCTT
GACGATTTCCCAAACAGTGTAAAAGATACCAAGAATCGACGCGACTAATA
AATGTTTTGATGAGATGAGTGCGAATAGTGGGTATGATGTGAAAGCAACC
AGTGTTGACATGAGGATTTGCATGAAAAAGGAACAAAGATAACTCTCAGG
TCCCTTAATACTAGAGCACGTGTTTTTGGCGGATGGATCTTTGTGAATAA
TGATTTCCAAAATGTTTTGCGATAAAAACCCATAAGTTACGGTTGTTAAG
AGGCGGTTACGATCGTTGTCTTGGAGAAACATAAACGGTGGCTGTATTGT
GAACTTAGAGTTTTTCCATGCTGAATGGAGATTTAAGATTGCGAGCACCA
GTGCAGGAAGTAAATACCAGAGTACTGTTAAAAATGTTGTTTTTTCGATT
GCACGATCACAAGCCATGGCGAAAGTCTGCGAAATCACTTCTTCACTCTG
CTCAACTTTGCAAAGACACAACTTGTTTCTCATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062264-exon-scaffold_362-1575043694:581634..584218 | TCONS_00062264-exon-scaffold_362-1575043694:581634..584218 | Clytia hemisphaerica | exon |
| TCONS_00062264-exon-scaffold_362-1510915933:581634..584218 | TCONS_00062264-exon-scaffold_362-1510915933:581634..584218 | Clytia hemisphaerica | exon |
| TCONS_00062264-exon-scaffold_362-1491911889:581634..584218 | TCONS_00062264-exon-scaffold_362-1491911889:581634..584218 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:581634..584218 - |
Blast
The following BLAST results are available for this feature:
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