Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062251 ID=TCONS_00062251|Name=TCONS_00062251|organism=Clytia hemisphaerica|type=transcript|length=881bpRun BLAST on NCBI transcript from alignment at scaffold_362:404936..405873- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00062251 ID=TCONS_00062251|Name=TCONS_00062251|organism=Clytia hemisphaerica|type=transcript|length=938bp|location=Sequence derived from alignment at scaffold_362:404936..405873- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00062251 vs. Swiss-Prot (Human)
Match: MCATL (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.656e-58 Identity = 103/217 (47.47%), Postives = 133/217 (61.29%), Query Frame = -2 Query: 233 FGLYKGMVSPLYGQIGINAIVFGIHGNVLKGLGNRDIKSQFFAGAVAGGVQSVIASPMELVKIRFQMQGEGVLKHNKLTAADHKYFYDSPTDCLKKIYKHEGGAKGLFRGMSLTLVRCLNSFGIYFASYDFLCKKTDAVTEECVNVWKLLLCGGTAGSICWLIAYPTDVIKTRQQMDGM-GRTKYKGVIDCTLKSIHEEGYRVLFRGLNATLLRAFP 880 GLYKG+ SPL G INA+VFG+ GN L+ LG+ +QF AGA AG +Q VI PMEL K R Q+Q G + Y DCL +IY HE G +G+ RGM TL+R SFG+YF +YD L + + + V KLLL GGT+G + WL YP DV+K+R Q DG+ G +Y+G++DC +S EG+RV RGL +TLLRAFP Sbjct: 56 LGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAGPART-----------YKGSLDCLAQIYGHE-GLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFP 260 The following BLAST results are available for this feature:
BLAST of TCONS_00062251 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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