TCONS_00062207 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062207
Unique NameTCONS_00062207
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1217

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062207 ID=TCONS_00062207|Name=TCONS_00062207|organism=Clytia hemisphaerica|type=transcript|length=1217bp
TTCAGTTTTAGATAAATGTaaagaatatcaaaaataaataaagatgGTAA
TTCATGACTTTTACTCGTAAATGTTTGGTGCCCTGGTTCAAAACAAGGGT
ACCAGGTTTCAAATGCAGGTCTATTTGGAATATGTTTGATGATTGTGTGG
ACAATACTTTTCTGGATTTAATACATCAAGATGAAACATAATATCTGCAT
GGTATCCGACTTCTTTTATCCCAATATGGGAGGCGTTGAAAGTCACATTT
ATCAACTATCACAATGTCTACTTGCAAGAGGACACAAGGTAATCGTTGTC
ACACACGCTTATGGTAATCGAAAAGGAGTTCGCTATCTGACCAATAATCT
CAAGGTATATTACTTACCATTCAGTATCATGTACATCAATGTCATTCAAC
CGACTGGTTTTGTCACTCTACCAATGTTTCGTGATATCTTTATCCGTGAG
AAGATCACCATCGTTCATGGACACTCAGCATTCTCAGTTCTCTGTCAAGA
GTCAATCATGCATGGTAAATCGATGGGATTAAAGACAGTCTTCACGGATC
ATTCGCTGTTTggatttgctgatgtcagctcTATTTTAACCAATAAGCTT
CTTGAGTTTACTTTGACGGATATCGATCACGTGATTTGTGTTTCAAACAC
AAGCAAAGAGAATACCGTATTACGGGCATCCATACATCCGGATAAAGTTT
CAGTCATTGCAAATGCTGTTGATTCTGATGTCTTCACACCGGATCCAACA
AAAAAAGATGCCAGTAAAATAACGATCGCAGTAGCAAGCCGACTTGTATA
TCGCAAAGGGATTGACTTGTTGGCTGGCGTTATTCCTATTCTCTGTCAGA
AATTTCCTCAAGTCCAATTCATTATCGGTGGTGATGGGCCAAAACGTATT
TTATTGGAAGAAGTCCGAGAAAAATACCAACTTCATGAGAGAGTGCAATT
GCTGGGTGAACTTAAGCATAAAGATGTGAGAAATTTGCTTGTACAAGGAG
ACATCTTTCTTAACACGTCGCTGACCGAAGCTTTTTGTATTGCAATTGTA
GAAGCCGCATCTTGTGGCTTGCAAGTAGTAAGCACCAACGTTGGGGGTGT
TTTTGAAGTATTACCTTCAGACATGATATATTTGGCTGAGCCAAGCGTGC
AAGATATCACACGTGTTATGGAACAAGCAATCAGTGATCGTCTTAAAGGT
CACGTGATTGATCCTTT
Run BLAST on NCBI

transcript from alignment at scaffold_362:733540..745588+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062207 ID=TCONS_00062207|Name=TCONS_00062207|organism=Clytia hemisphaerica|type=transcript|length=12049bp|location=Sequence derived from alignment at scaffold_362:733540..745588+ (Clytia hemisphaerica)
TTCAGTTTTAGATAAATGTaaagaatatcaaaaataaataaagatgGTAA
TTCATGACTTTTACTCGTAAATGTTTGGTGCCCTGGTTCAAAACAAGGGT
ACCAGGTTTCAAATGCAGGTCTATTTGGAATATGTTTGATGATTGTGTGG
ACAATACTTTTCTGGATTTAATACATCAAGATGAAACATAATATCTGGTA
AGATATTCTCTGTTAAGAATGTTGTCTGTAAATAGACCCGATAGCTacgg
aaattttaaaattaattgcGGTACTATGCCATGTTATATGTGAGATACAT
TCTGGGACTTAATATGAAATCGATTTCACGAGGAATTTTCAGACACAGAA
TCAGACTCTGACATTTGTAGCTAACTAATATTTTCTATGTTTCTTCTATT
CTAGCATGGTATCCGACTTCTTTTATCCCAATATGGGAGGCGTTGAAAGT
CACATTTATCAACTATCACAATGTCTACTTGCAAGAGGACACAAGGTACC
ATTCGTTTATTAAATTAAACCCTTTTCCTTACTTTCTGTACGGAAGAAAA
ACACTAGCTATGATATAGAAAGGAGGCGCAcctttatgctgacaaagcag
aataacCAATATAATTCCTCAAAAATTTTCCTGGTGCGGTGTGGgtactt
tcttttctttaaatatGCTCTGTAAGCAAATGGTAAGAGAAATGTAAAGT
GATGCTCTTTAAGAACCTATTTCCCCCAAACCCATACTTGAGAAAATTCA
Acaagtttttgtaaaatcgctacccctgattgtaaaaaaatgttttctaa
gATGACTATGATGTTATACTATGGTTATTTATTTAGGTAATCGTTGTCAC
ACACGCTTATGGTAATCGAAAAGGAGTTCGCTATCTGACCAATAATCTCA
AGGTACGATGTTTCAAAGCCATAATAAGTAGTTGTAGTTCTTTTTACAAC
CGTCCTTTATAAAATGGTTTAATTCGCCGACACCTCTCTTACTCAGGCAC
actataaattttcaatttatcttTAAATTTGCTTTAAGTAGCCCCATGCA
TCAATCACAAAATCTAGACGGAATCAGTCGAACGAGAATATTAATTGAAC
CGCATTAAAACGCTTTGGTGTTAGGTTAAAAGGCAGTTATTTCCTTCTCT
TACTCCTGcgaatgtttttgttgaaaatatgacgttttactTACTTATCT
GTATGTCTTAACTTTTTCTGCTAATTGCTTTGTTTATTAGTTTAAAGCTG
ATGTCATTTCCATTAGGGGTTTTACNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAGGAGACCACACCTTATGAAATATGGCA
CCGAAAGAAACCGGATGTGAGTAATTTGAAAGTTTTCGGATGTAAGTCCT
ACGTACACGTTCCAGATACCAAACACAAAGGAAAGTTCGACAAGAAATCG
ATTTCATGTATATTTGTCGGTTACCCATCAAACGGTTTTAATACTATTAT
ATCCTACAAGACTATAAAAATCTAGTTTAAACTTTATTGGGTTGCAGTTC
AATGATCGAACAACCAGATCATATCATCACACTCGCTATAACCCTTTAGA
GCAAAATGTTTGTAGGGATATGCTATGTAAACATATGTAGAAGATTGAAT
GATGTGTTTTATAACAATATTTTCCCTTCGTCAACGACAGGTATATTACT
TACCATTCAGTATCATGTACATCAATGTCATTCAACCGACTGGTTTTGTC
ACTCTACCAATGTTTCGTGATATCTTTATCCGTGAGAAGATCACCATCGT
TCATGGACACTCAGTAAGTTATCTCATTCACCGATGCTTTATTAAGGATT
TTGCTGTGAACTATTTATTAATATTAAGGAATGCCTACACAAACAATCCA
AGGTTTGTGACGCTCTGGACGATTTGGACTACCGCTTCACTTATCGACCC
TAGGATCTCTTTGTTATCCGTCCAATACTGGGAGAAGagtattttttcat
gatttcatgCCTTTTTATTGTCGTTGGACGTTGAAATAGCATAATAGGTT
TCTTCAATGCTGATAGTGGTCTTTAGGTCTTTGGATATTTCATAAAGCTC
AGTGGACCAAACTTCAAACAGTCACTCCTCaaaattgaatactatccatt
atCTTGTTCAGATCAAGTGTTGATTTAAttgattcgatttttttccCAAA
GGCATTCTCAGTTCTCTGTCAAGAGTCAATCATGCATGGTAAATCGATGG
GATTAAAGACAGTCTTCACGGATCATTCGCTGTTTggatttgctgatgtc
agctcTATTTTAACCAATAAGCTTCTTGAGTTTACTTTGACGGATATCGA
TCACGTGATTTGTGTTTCAAACACAAGGTGAGTTGTTTCATTTATCCtcg
cccagctggcacacaacgttgcttcaacgttcatctaatgttcacaacgt
tcaTATGATAACATTAGATgttaacgttaaaacaacgtcatGTACCGACT
TACCGACTTTCTTTCTTCCAGCTGCCGCAACTTAAGTTTTCaatcttttt
gataattttgatagttttttgATAGCCTAAATACCGAAAATACTCACTAC
TATTAAAACTCGAGAACTAGAAATAGTTGGGCCTTCAGAAAATTTAATTG
GTGGGATAATGTATTACACGACCACTGCGTACTACAGTATTGGCTTTTGG
ATACTTACTGATAGCGCCACGGGAACGAGGTTTTATATCACGATAATTAA
ATCGTCCCACACCATGCTGAAAGCCTTTAATTGCCTAACCTCACCATCTC
ATTATTTACTTTTAACTTTCCAGCAAAGAGAATACCGTATTACGGGCATC
CATACATCCGGATAAAGTTTCAGTCATTGCAAATGCTGTTGATTCTGATG
TCTTCACACCGGATCCAACAAAAAAAGATGCCAGTAAAAGTAAGTACGAT
GATACCATTGACCATTGGTCTGGGCTATATTATATTAGCCATAAGCAGTG
AATTAGTACTACTCAACGTTGGTCATTCTTTAATACGAATGATATTTTCC
GTTGAAAATCACGATGAACTACAGGGTACCTAATTCACTGAAAAACTCTT
AGCAAAGATTTTGGGTAAGCCTGGGGTCGAGGGTGGTGTTGGAATCTCTA
AAAATGGGTTCTAACACGGTTCATACGCCAAAACCAATGAACTTTGTTTT
CTTGCCTAAATCAAAAACTTTCGATTtgaatatttcaactttgaaaaaat
gcaagGCCAAAATTTAagtaggttttttttttaatatcatttaaggtatg
tgtacaccttttttccgatttttttcagtcaaagtggaagaaaagttact
ggatttcattttggtaaaatcgcgatcttaaagtTCGTctttatgatgga
ttatttactcaaataattttctctttcggaaacaacaaagacaaaagaga
gaattcagctgatgtttattctcacctctattgaatagtaatatttttga
cacatttcactgattactcaaataNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNattggctttcagaaaatatatacctttgatatataaaaa
tttgttgttctaaagatatgatcaattaaagagaatgtgtcaagaaaggt
gaacacataccttaaaggaGGTTTTATAGTTAAAGCATATAAGGGAACTT
TACCTCTTTAGTAATAAGCTACAAGAGAGAAATACATCATTGTGTACTCA
TGGGTTTACAACCTAttgttaatttcgcttagcgaaagtattacgatagc
ctttctgcggcggcggcggtgtcatcggaaaaaaaattagaaaacgaaag
tgcttgatacggtggacgaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcctcgttgttcttgtaaa
attgtttcatcaaggctcgatgtaaagtagatttcgaattggcttcaatc
tctacttcttgttttttctatGTAGTTTAagttctaggcgaaattttcga
ctttaagtcgtcttgttttcaGTAACGATCGCAGTAGCAAGCCGACTTGT
ATATCGCAAAGGGATTGACTTGTTGGCTGGCGTTATTCCTATTCTCTGTC
AGAAATTTCCTCAAGTCCAATTCATTATCGGTAAACATTAATTCCATACC
TCTATTTATGATACTGTCGGCATTGTCTTGGAAAGAGTGGGGGTCTTAGT
TAGTCAGGGAAAAAACTTCGTCAGCTAGAGacaattttgtcaaattttcc
tggactaaattgtccaaaagaaactttttatttCCATAGCTCGAAAATAA
ATTTCGTATTTCAACGTTttaagcactaatttcggttaataatgGTGTAA
ATTTCTGATAAGATTTCATATTAGCTGGTCGTCTATGAAATAATATTaga
tttgatgaattttagAATAACAATATTGTGAATTTTAGGTGGTGATGGGC
CAAAACGTATTTTATTGGAAGAAGTCCGAGAAAAATACCAACTTCATGAG
AGAGTGCAATTGCTGGGTGAACTTAAGCATAAAGATGTGAGAAATGTAAG
GAATTTTAGAAATAGTGTTTTGAGAATTTCGGAAAGCCTCTAGGCTACTG
GCATTCACTAACGCATTCGTTTTATATGCTACCTGCGGTTTTGGAGAAAG
AGATCTGTGATTGAAACTAGGAGAGCTTCCGTTAAAGCAGAAACCTTCCC
ATNTAGAGAGAGAGATCTGTGATTGAAACTAGGAGAGCTTCGTTAAACCA
GAAACCTTCCCATCGGTCGTAGGTCAGCTTGAAACCACATGGTTTTCGTC
CGACATATCCTCCTTAGAATGAGCTCAAATACTTCACAGGGTTTTAAACC
AGGAACTGAGATTCAAAGTTATTATGTGATCCCCATTCTTAGATAAATCA
GACACGCTCAATAACGAAAGAATTTTCTATTAGTGAAACGAGCTTCACGT
TTGCCTTGTTGCTCTCAGCGCcatgatattcaaaattttcaattttcttg
ggTTTTCAATTTAGTTGCTTGTACAAGGAGACATCTTTCTTAACACGTCG
CTGACCGAAGCTTTTTGTATTGCAATTGTAGAAGCCGCATCTTGTGGGTG
AGTTCAATTTCTCTCGGACTTCAATTGCTAAAATCTTTTTCCTCTCGGGA
ATTTTGCTTTGTCGGATATATATAATTTGGTTAAAACTTTTGATCGGTGT
GAAAACNCGCTTTATTTGGGATATAATTTGGTTAAAACTTTTGATCGGTG
TGAAAACGTTTTAAGCGCAAGGAAGTTGTCAAAAGCTTAGTTTTTCCGAC
TAATGAACTTGcaaattttgatgcttttttttTCTAGTCTTTAGAATTAT
TTCACCCTCGCAAGAAAATGAATCGTTCATTTTAATGACTAGTAAAATGC
ACAACTAAAAGTTGTTACCAAGGATCTCTGGATACACCACTTATTAATTA
AGCTTATTAATCTTATAAACAActtcgaaaaaaattaattcgaTGATATT
TACATTGCTTTTCTTTTCAGCTTGCAAGTAGTAAGCACCAACGTTGGGGG
TGTTTTTGAAGTATTACCTTCAGACATGATATATTTGGCTGAGCCAAGCG
TGCAAGGTAATTCATATTTGGTTTAACCTATTTCCATGTTTAAAATTCAT
TCAACCAGAAACCATTTATAAACCATTATAATTACTCAACAACTCAAATC
AACCATTTGATAAAGGAATTAACAAAATCTACCTCTATTTATAATGGCGa
gtttatatgttttttttttaatatcaggctcgcattatgcttagcattct
attgttctcaaacaatagagccattgtttaggtaccaaaaactgagcctg
catatgcttataaacgttatgcttataaaagaaaaaacatgtatattcGA
GATAATCGAATGAAATGGTATATAGTAAATTTGACTTGTCGCCAAAATCA
CCGttcactttgctcgacgacggtaaaaacacgaAAATGCCGTCGTCTGT
TTAAGTGAACAAAGGCGTTAAAAACCCTaagattgggctattccagaaaa
aaattataccccctatgttgaggagatctttttttttaaatgtgacCGCC
CTggattttttagcaatttttcaggacctcgtttgattttttttctccta
tttctttgaaccaccctggattttttattttccaagccaccctggacgtc
acacctcctcaacatagagGGTACAgattatttctggaatagcccatttt
aagattttgtataGAAGGCTACAGTTACATAACAATCATCTTTATCATCC
GGCTTTCTTTCAAACTACCATGAAAATCCGGTGTTTTGGGCGTAGATTTA
AACAATACATGAGGTGAGATTCAAGTTGTCCATGACCGAGAATATCTTTC
GAAAAGTAATGATATGATAATATCGATCTATTTATGAAACTCCACTTTAA
TCCGACACAGATACTTTCCCCTTTCCAAATTTTAATACTCCTATCTTCAg
caatataccttatcggccaaaacttagtcggccctaagtgactaaatttt
tggATTGGTGAAATAGCTATCTCATGATCTAACATCGAAACCCTATAGGC
GAATCTTCAACTTTTCATAAGCAACAATAGTTGagccttcccagctggca
cacaacgttgtttcaacgttaatctaacgttaaatggacgttgtgaacgt
tagattaacgttgaaacaacgttgtgtgccagctggattTTGATTTACAA
TGGATGGAACCTAGTGGTCGCTGTGTTCTCTTTTTTCTCATATGAGATTT
AGCCTGTTgggctattcatgatattcatgacgtaatgttttctacggaaa
gaccccggtttttgctaGTAGTGGCAacttttatacaacttttgtcagTT
TAAAGTTGTCaatactggctaaaaccggggtatttccgtagagaacatta
cgtcatgaatatcatgaattacttTATTTGGAAAGGCTATCAAATAAAAT
TCACGATCAATTTGATTCTTGATATCCACgatgtaatgttttctacggaa
ttACGCCGGTTTTTGCcggtagtggcaaatttaagctataaagaaaaatt
gttaaaaattttctaCTACTGACCAAACCGGGgcgtttccgtagaaaaca
ttacgtaatgaatacTCTGAATTGAGTTGCAATTGGCGAAGTAAAGAGTa
acagaaaaatttgaattaaatacAATCTCTCTTCAATTCAAATCCTCTCC
GGGCATTACCAAGTTTTTTCCCGAATATTCGTTAGCCTAAAACAAACTCT
ACTTTGctgaataaaaaatttaaaaacgatAAATATGGTCATGTGGATGA
TTTTAAAGCTCCGATGGGGTTAGAGATAAAACTTTCGGATGGGAAATAAA
GCCACTTGATTGCCCGTCTGAAACGCGTGGACTGTGTTTTTCACATGTAC
CCCGGATCGAAAGTAAAATGCATTGCcacatttcgaaaaatatatgccgc
gtgaaaataaaaaaaatgcttGATACAATCCGTCATTCTGAATGTGGTGC
AAaccttaaggcttcacttttttcttgcttgcctttaaactcaatgggat
GGATGGTTTTCATAAGGGTCACGTGATTGATTCTTTTTTTCTGAACCGAC
CAATGAAATGCGTTCTACATTGTTTTAGATATCACACGTGTTATGGAACA
AGCAATCAGTGATCGTCTTAAAGGTCACGTGATTGATCTTTTCGTTCTGT
ATTGACCAATGAAATGCGTTCTTGATTGTTTTCAGATATCACACGTGTTA
TGGAACAAGCAATCAGTGATCGTGTTAAAGGTCACGTGATTGATCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039000XLOC_039000Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062207-exon-scaffold_362-1491911889:733540..733736TCONS_00062207-exon-scaffold_362-1491911889:733540..733736Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:733540..733736TCONS_00062207-exon-scaffold_362-1510915933:733540..733736Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:733540..733736TCONS_00062207-exon-scaffold_362-1575043694:733540..733736Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:733944..734034TCONS_00062207-exon-scaffold_362-1491911889:733944..734034Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:733944..734034TCONS_00062207-exon-scaffold_362-1510915933:733944..734034Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:733944..734034TCONS_00062207-exon-scaffold_362-1575043694:733944..734034Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:734376..734441TCONS_00062207-exon-scaffold_362-1491911889:734376..734441Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:734376..734441TCONS_00062207-exon-scaffold_362-1510915933:734376..734441Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:734376..734441TCONS_00062207-exon-scaffold_362-1575043694:734376..734441Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:737280..737402TCONS_00062207-exon-scaffold_362-1491911889:737280..737402Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:737280..737402TCONS_00062207-exon-scaffold_362-1510915933:737280..737402Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:737280..737402TCONS_00062207-exon-scaffold_362-1575043694:737280..737402Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:737791..737966TCONS_00062207-exon-scaffold_362-1491911889:737791..737966Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:737791..737966TCONS_00062207-exon-scaffold_362-1510915933:737791..737966Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:737791..737966TCONS_00062207-exon-scaffold_362-1575043694:737791..737966Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:738413..738528TCONS_00062207-exon-scaffold_362-1491911889:738413..738528Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:738413..738528TCONS_00062207-exon-scaffold_362-1510915933:738413..738528Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:738413..738528TCONS_00062207-exon-scaffold_362-1575043694:738413..738528Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:741762..741869TCONS_00062207-exon-scaffold_362-1491911889:741762..741869Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:741762..741869TCONS_00062207-exon-scaffold_362-1510915933:741762..741869Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:741762..741869TCONS_00062207-exon-scaffold_362-1575043694:741762..741869Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:742178..742284TCONS_00062207-exon-scaffold_362-1491911889:742178..742284Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:742178..742284TCONS_00062207-exon-scaffold_362-1510915933:742178..742284Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:742178..742284TCONS_00062207-exon-scaffold_362-1575043694:742178..742284Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:742754..742836TCONS_00062207-exon-scaffold_362-1491911889:742754..742836Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:742754..742836TCONS_00062207-exon-scaffold_362-1510915933:742754..742836Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:742754..742836TCONS_00062207-exon-scaffold_362-1575043694:742754..742836Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:743260..743345TCONS_00062207-exon-scaffold_362-1491911889:743260..743345Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:743260..743345TCONS_00062207-exon-scaffold_362-1510915933:743260..743345Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:743260..743345TCONS_00062207-exon-scaffold_362-1575043694:743260..743345Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:745418..745462TCONS_00062207-exon-scaffold_362-1491911889:745418..745462Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:745418..745462TCONS_00062207-exon-scaffold_362-1510915933:745418..745462Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:745418..745462TCONS_00062207-exon-scaffold_362-1575043694:745418..745462Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1491911889:745570..745588TCONS_00062207-exon-scaffold_362-1491911889:745570..745588Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1510915933:745570..745588TCONS_00062207-exon-scaffold_362-1510915933:745570..745588Clytia hemisphaericaexon
TCONS_00062207-exon-scaffold_362-1575043694:745570..745588TCONS_00062207-exon-scaffold_362-1575043694:745570..745588Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:733540..745588 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000218444	0	0	0	5.39804	4.3161	3.61183	3.23213	0.33502	0.983609	1.68616	9.9202e-05	0.0247701	0	0.0355985	0.00611756	0	1.32032	0	0	0	0	0.277929	0	0.00804848	2.15098	0	0	0	0
Blast
[Close]
BLAST of TCONS_00062207 vs. Swiss-Prot (Human)
Match: PIGA (Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1)

HSP 1 Score: 497.664 bits (1280), Expect = 2.581e-173
Identity = 237/343 (69.10%), Postives = 285/343 (83.09%), Query Frame = 1 
Query:  187 HNICMVSDFFYPNMGGVESHIYQLSQCLLARGHKVIVVTHAYGNRKGVRYLTNNLKVYYLPFSIMYINVIQPTGFVTLPMFRDIFIREKITIVHGHSAFSVLCQESIMHGKSMGLKTVFTDHSLFGFADVSSILTNKLLEFTLTDIDHVICVSNTSKENTVLRASIHPDKVSVIANAVDSDVFTPDPTKKDASKITIAVASRLVYRKGIDLLAGVIPILCQKFPQVQFIIGGDGPKRILLEEVREKYQLHERVQLLGELKHKDVRNLLVQGDIFLNTSLTEAFCIAIVEAASCGLQVVSTNVGGVFEVLPSDMIYLAEPSVQDITRVMEQAISDRLKGHVIDP 1215
            HNICMVSDFFYPNMGGVESHIYQLSQCL+ RGHKVI+VTHAYGNRKG+RYLT+ LKVYYLP  +MY      T F +LP+ R IF+RE++TI+H HS+FS +  +++ H K+MGL+TVFTDHSLFGFADVSS+LTNKLL  +L D +H+ICVS TSKENTVLRA+++P+ VSVI NAVD   FTPDP ++  S ITI V SRLVYRKGIDLL+G+IP LCQK+P + FIIGG+GPKRI+LEEVRE+YQLH+RV+LLG L+HKDVRN+LVQG IFLNTSLTEAFC+AIVEAASCGLQVVST VGG+ EVLP ++I L EPSV+ +   +E+AI     G +  P
Sbjct:   33 HNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPDPFRRHDS-ITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPKRIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAP 374
The following BLAST results are available for this feature:
BLAST of TCONS_00062207 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGA2.581e-17369.10Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
back to top