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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062142 ID=TCONS_00062142|Name=TCONS_00062142|organism=Clytia hemisphaerica|type=transcript|length=927bp
aaacaacattcaatttctAAACGATTGTTTGAGGAGGATTCGTCATCAGG
AAGGGGAGGAATTTGAATCTGAAGAAAGCGAAATGTCCGAAGATGAAACT
GATGATGAAAACGTGATATCCAAAAACTCAAGAATTGCTGGAAAGGCCTG
GCATAGCCAACAAAAGAGACTGAAGTCACTAGTAGATGGTATACACCAcg
tcaagaaaacaaaaaggttgtATATTGGTGGTTTGTTGAAGAGATTCTTA
AAAGATGAAGATGGCGCTGTTAACTCACTTCAGTTGCACTGTCTAAAGCC
TAAACTTAGGAGTAGCACTGTTCTTGAAGACACCCCAGACCATCTTCCAG
ATATAAGCATTTTCCCAGTTCTTGACATCATAGATGGGCCATTAAAGGTC
ATTCCCATTtgaggaaaaaaatgaacatcCCAGATCATGATTCaattgaa
aatatgtttaaCAAAATATCAGGACTAAACCGTCTAGCTTTAGTAAATAT
GATGTAATATATCCATACTTTTTGTTAAGCTTTTGAGTTATATATGCTAA
ACATTATTGTTGTATTTTTgcatagtttttcttgaaaatgtgtcacaaaa
ttgtattccaGAAGTATGTTTGagaaatagataaatatttttgtgtttga
tatcaaaaaattctaaaacttaaaatttttctcatttgtacctcaaaacc
cacaatttgaaaatgagttttTTGAGAGCAATTAAAATAAACACATTGCT
TACAGTACTTAGGACTTTTTTCCTACATTTGTGTTATGCCTAGAGgtaat
agaaaacaaaagattgaTAGGTTAGTCAATAGCAAGTGACTtatctgacc
attttttgaaaaaaatcaaaaattttaaagttagATTTCTAGCGTtaaat
cttgataaaaaaacttttacccaaCCA Run BLAST on NCBI protein sequence of TCONS_00062142-protein >TCONS_00062142-protein ID=TCONS_00062142-protein|Name=TCONS_00062142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
NNIQFLNDCLRRIRHQEGEEFESEESEMSEDETDDENVISKNSRIAGKAW
HSQQKRLKSLVDGIHHVKKTKRLYIGGLLKRFLKDEDGAVNSLQLHCLKP
KLRSSTVLEDTPDHLPDISIFPVLDIIDGPLKVIPI Run BLAST on NCBI transcript from alignment at scaffold_361:1722116..1723042 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062142 ID=TCONS_00062142|Name=TCONS_00062142|organism=Clytia hemisphaerica|type=transcript|length=927bp|location=Sequence derived from alignment at scaffold_361:1722116..1723042 (Clytia hemisphaerica)
TGGttgggtaaaagtttttttatcaagatttaACGCTAGAAATctaactt
taaaatttttgatttttttcaaaaaatggtcagataAGTCACTTGCTATT
GACTAACCTAtcaatcttttgttttctattacCTCTAGGCATAACACAAA
TGTAGGAAAAAAGTCCTAAGTACTGTAAGCAATGTGTTTATTTTAATTGC
TCTCAAaaaactcattttcaaattgtgggttttgaggtacaaatgagaaa
aattttaagttttagaattttttgatatcaaacacaaaaatatttatcta
tttctCAAACATACTTCtggaatacaattttgtgacacattttcaagaaa
aactatgcAAAAATACAACAATAATGTTTAGCATATATAACTCAAAAGCT
TAACAAAAAGTATGGATATATTACATCATATTTACTAAAGCTAGACGGTT
TAGTCCTGATATTTTGttaaacatattttcaattGAATCATGATCTGGga
tgttcatttttttcctcaAATGGGAATGACCTTTAATGGCCCATCTATGA
TGTCAAGAACTGGGAAAATGCTTATATCTGGAAGATGGTCTGGGGTGTCT
TCAAGAACAGTGCTACTCCTAAGTTTAGGCTTTAGACAGTGCAACTGAAG
TGAGTTAACAGCGCCATCTTCATCTTTTAAGAATCTCTTCAACAAACCAC
CAATATacaacctttttgttttcttgacgTGGTGTATACCATCTACTAGT
GACTTCAGTCTCTTTTGTTGGCTATGCCAGGCCTTTCCAGCAATTCTTGA
GTTTTTGGATATCACGTTTTCATCATCAGTTTCATCTTCGGACATTTCGC
TTTCTTCAGATTCAAATTCCTCCCCTTCCTGATGACGAATCCTCCTCAAA
CAATCGTTTagaaattgaatgttgttt Coding sequence (CDS) from alignment at scaffold_361:1722116..1723042 >TCONS_00062142 ID=TCONS_00062142|Name=TCONS_00062142|organism=Clytia hemisphaerica|type=CDS|length=411bp|location=Sequence derived from alignment at scaffold_361:1722116..1723042 (Clytia hemisphaerica)
tcaAATGGGAATGACCTTTAATGGCCCATCTATGATGTCAAGAACTGGGA
AAATGCTTATATCTGGAAGATGGTCTGGGGTGTCTTCAAGAACAGTGCTA
CTCCTAAGTTTAGGCTTTAGACAGTGCAACTGAAGTGAGTTAACAGCGCC
ATCTTCATCTTTTAAGAATCTCTTCAACAAACCACCAATATacaaccttt
ttgttttcttgacgTGGTGTATACCATCTACTAGTGACTTCAGTCTCTTT
TGTTGGCTATGCCAGGCCTTTCCAGCAATTCTTGAGTTTTTGGATATCAC
GTTTTCATCATCAGTTTCATCTTCGGACATTTCGCTTTCTTCAGATTCAA
ATTCCTCCCCTTCCTGATGACGAATCCTCCTCAAACAATCGTTTagaaat
tgaatgttgtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062142-exon-scaffold_361-1491911889:1722116..1723042 | TCONS_00062142-exon-scaffold_361-1491911889:1722116..1723042 | Clytia hemisphaerica | exon |
| TCONS_00062142-exon-scaffold_361-1510915933:1722116..1723042 | TCONS_00062142-exon-scaffold_361-1510915933:1722116..1723042 | Clytia hemisphaerica | exon |
| TCONS_00062142-exon-scaffold_361-1575043694:1722116..1723042 | TCONS_00062142-exon-scaffold_361-1575043694:1722116..1723042 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1722116..1723042 . |
Blast
The following BLAST results are available for this feature:
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