TCONS_00062140 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062140
Unique NameTCONS_00062140
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length113

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062140 ID=TCONS_00062140|Name=TCONS_00062140|organism=Clytia hemisphaerica|type=transcript|length=113bp
atcctTAATAAATTATACGATTTACATAAACTCTGCGATAAGCTCCCAAA
AGTTTTCCCAAGGGACACGAAAGCTTTTTCCCAAAgtaaaaatttaactt
ttatgaTTCAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_361:1602843..1602955

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062140 ID=TCONS_00062140|Name=TCONS_00062140|organism=Clytia hemisphaerica|type=transcript|length=113bp|location=Sequence derived from alignment at scaffold_361:1602843..1602955 (Clytia hemisphaerica)
CTCTGAAtcataaaagttaaatttttacTTTGGGAAAAAGCTTTCGTGTC
CCTTGGGAAAACTTTTGGGAGCTTATCGCAGAGTTTATGTAAATCGTATA
ATTTATTAaggat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038963XLOC_038963Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062140-exon-scaffold_361-1491911889:1602843..1602955TCONS_00062140-exon-scaffold_361-1491911889:1602843..1602955Clytia hemisphaericaexon
TCONS_00062140-exon-scaffold_361-1510915933:1602843..1602955TCONS_00062140-exon-scaffold_361-1510915933:1602843..1602955Clytia hemisphaericaexon
TCONS_00062140-exon-scaffold_361-1575043694:1602843..1602955TCONS_00062140-exon-scaffold_361-1575043694:1602843..1602955Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1602843..1602955 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062140 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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