TCONS_00062093 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062093
Unique NameTCONS_00062093
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062093 ID=TCONS_00062093|Name=TCONS_00062093|organism=Clytia hemisphaerica|type=transcript|length=226bp
ATCCGCTCTTCGACCTCTATTAAGGTTTGTATCCGTAGATTGGAGCTTAT
TTTACTTTCAAAGGTTCATGAAGTTGGTCTTAAGTTCGAGTTGGCATAGG
AATTGAAGGAGATTTTCATCATTGTTTGTAACAAAGAAGTCAGAAATCAT
TTGAAACATAGCAATTACAGTAGTAAAACTGTTAAACAAGGCTGAAAAAA
GCTCCATATTTTATCAGACGTTCAGA
Run BLAST on NCBI

transcript from alignment at scaffold_361:198826..199051

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062093 ID=TCONS_00062093|Name=TCONS_00062093|organism=Clytia hemisphaerica|type=transcript|length=226bp|location=Sequence derived from alignment at scaffold_361:198826..199051 (Clytia hemisphaerica)
TCTGAACGTCTGATAAAATATGGAGCTTTTTTCAGCCTTGTTTAACAGTT
TTACTACTGTAATTGCTATGTTTCAAATGATTTCTGACTTCTTTGTTACA
AACAATGATGAAAATCTCCTTCAATTCCTATGCCAACTCGAACTTAAGAC
CAACTTCATGAACCTTTGAAAGTAAAATAAGCTCCAATCTACGGATACAA
ACCTTAATAGAGGTCGAAGAGCGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038916XLOC_038916Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062093-exon-scaffold_361-1491911889:198826..199051TCONS_00062093-exon-scaffold_361-1491911889:198826..199051Clytia hemisphaericaexon
TCONS_00062093-exon-scaffold_361-1510915933:198826..199051TCONS_00062093-exon-scaffold_361-1510915933:198826..199051Clytia hemisphaericaexon
TCONS_00062093-exon-scaffold_361-1575043694:198826..199051TCONS_00062093-exon-scaffold_361-1575043694:198826..199051Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:198826..199051 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062093 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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