TCONS_00062080 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062080
Unique NameTCONS_00062080
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2777

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062080 ID=TCONS_00062080|Name=TCONS_00062080|organism=Clytia hemisphaerica|type=transcript|length=2777bp
caattttgaccaaatgtcGATCTTTCTGAGGGAAAAAGaGTGGAGGTACT
ACAGTTCCAGTTGAAAGCAATACAGTTCGTTTTGTCGATAACTTCAGTCA
AGGAACAAGAGGTGCTGCATCTGCAGAatattttcttcttcatggaTATG
CAGTCATATTTCTACATAGACAAAGATCATTTGAGCCTTTCTGTAGACAC
TTTGAAGGGCATAATGCACTTGATTTGTTGGAGTTACAGCTGGACACGAG
TGGTGCTTACAGACTTACAGTGGATGAGACGAGGGCACCTGGCTTGCAAG
ATGTAGTACGCAGGTACAAAGAGgTTCAAAACGGATGCTTGCTATTAAAG
ATTGGATTCATGACACTTTCagattatttgtttttgttacGAGCATCATC
TGAGGCTTTGTCACCTCTTGGTAGAAATGTCATGTTTTATTTGGCTGCTG
CTGTTTCAGATTTTTACATCCCAGATAACGAAATGgCTGAGCACAAGATT
CAATCGTCAGATAAAAACTTTGTTCTAAATATGTCGCCAACACCCAAAAT
GTTATCTCCTCTTGTTCGAGAGTGGGCAAAAAATGCTTTTGTGGTTTCAT
TCAAGcTTGAAACTGATATGAATATTATTACAAAGAAAGCAAGAGAAGCA
CTACAAAAATATAATCACCAGGTTGTAATTGCCAACATTTTACAAACCAG
AAAGAAGACTGTCATTTTGATCACACCTGAAGATGAAATTCCCATCTGGA
TGAGTGACCAAGAACTAGATTATGggaaagaaattgaagaaaaaatagtt
GGAGAATTGTTTCGACGACATTCCTCTATGATTTCTGGTCAAGCAGGAAG
TGGACAAGTATCAACACCAGTTGTCAATAGCAACATATCCTTTTCTTCTG
GCCAGCCACAGTACCAATCACAGACGTCCATCAATGCATCCAACACATCA
ACTTCTTCACATCAATCATCCATGCCTGGCCTGGCACCCATCAATGTTTA
TCCTAGTAGCAATCCTGCGAAACTGCAGAATGTGTTGTTACACTTAAAGA
GCACCAACGATGCTGAGATGAGTAGTCATCATTCAAATGAAATGTTAGGA
GCTACTAACGCTAGTATTTTGAAGCGTTCAGTTTCTGCAAAGGAAGACTC
AGGTGGTCTTACTCAAGAGATGCAAGAATTCATCCGTGAATTCAAAACAA
GACGTGTCAACCTTGGTTACACTCAAGATGACGTTGGTCGTGAATTATCT
GCACTTAATGGTCCTACTTATAGTCAATCTTTTATCTCGAGATTTGAAGG
GAAACAGTTGGGGATGAAAGCTGCAGAGCGCATGCGTCCAATTCTGGACA
CGTGGATCCAATCAAAAGAAGTTGATGTAGCTACTGGAGGAGGtaacaaa
tttcaaaagaagcGACGCAAGCGAACCAGTTTCTCACCAGAATACATACA
AGTTTTGAACGATTACTTTCAGAAGAATGCTAAACCAACTCCTGAAGAAA
TGCAAATGATTGCTAATAAGATTAATATGGACTTAACAACCGTGAAAGTT
tggttttgtaataaaaaacaaagtttaaaGCGTGTTGGTCAACCTTCTCC
ATTTCATGCCAGCGCTGCCAAATCACCCAAATCAGAATCAACGCAACAAG
ATCGTAATAAAGTCATGAAAAGACTCAAATCGTCAGATTCACCCGGTGGT
CTATTTGCATTGAACACACCAGCGGGTATGAAGACTTTGATTCCGGTATC
CACACCAACCGGTACTGTAACAATGCCCTTCTTCATTAGCCAAGACGGTA
ACCCCATTCCCATCGTGTCCGGAGCCAACCTGAACAATGGAACTAACAGT
GGAGTCGGTCAAACACCTGGACAACAAATCTCTTCAACCTTACCACAGCA
AATTGTGCATCTGTCACAAGTTCCAATTCTAACGTCAATGGTGGTTAATA
ACACATTACAAAATAACGGAACAACTGATAATCCCGGTGCCACGCAGATC
ATATCCGGAGGACGAATCATCCCGTCCGGTTCTGTTCTTCAACTTCCGGG
CGGCGCAATCGCATCACAACAAGCTCTTCAACAAAGTAATTTAAACCAAG
CCTCGCAAAATACTCTTAATGATCCCAATGTGTTGATGGGATCTGATGGA
AATAACagtttacagaccagaacgTCTGTTCCTATGGGAGCACCAGTCAA
TGCTAACACGCCCGGACGAAATAACGAAAACATGCTTTTAAATAAGGACC
CGATGAAACAGATCTCGGAAAAAGACTTAGAATCGGACGAGGTCTGTGTG
GCGGACGAATcgatgaataaaaatgaaaaacttgttCAACGTAACCCTAT
GGGTGTACCTGAAAATACCTAGTGAGAATATTTCtgaatttctgttttgc
ttACATGTGATGGGATTGTATATATGATTTGTCATTGAGTCAGGCTTGTG
TGTTTTCTGTTACTTTTtatatttccttttttcaattttttagaaatttt
aaattacaTTTAGTCATAGATCTTTATTCATTCAGTTTCATGCCGGGTCG
TTTCCTTAGATGATATTTACCTGCGCCGTAAAGGTTTCCAACACTGTACt
caaatcttttaatttttggaaggcatagatttttgtatttatttcttttg
aCTTGATACGATATTTTTTAAGGATATTTTACAGAGAGACTTCTAACAAA
TTCTTTTCCTAACAGATTGTAAATAGTTTAGGCTTCTTCAATGCTAAAAT
GAAATATGAAGACcttagataaaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_361:1694618..1706004-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062080 ID=TCONS_00062080|Name=TCONS_00062080|organism=Clytia hemisphaerica|type=transcript|length=11387bp|location=Sequence derived from alignment at scaffold_361:1694618..1706004- (Clytia hemisphaerica)
CAATTTTGACCAAATGTCGATCTTTCTGAGGGAAAAAGGTGAAATTTTCT
CCGACCCTTAGAGGGACTGAAATTTGATTTTCTGATTTTTCCAACCCTAC
TTAGCAGCGGGACTTTCGAAATTCAAAAAAGGTACCCTTAAGGGCGGCAC
ATATCGTACCCTCCATTTGCCTAAGTACCCCCCCCCCTCGGATTAGGATA
TAAAGCTAGGCTAGACTCTTTGTGCAGCAGCAGGGGGTGAGGCGGGTTAT
ACTAAGACTGTAGGATTTTTTTTCGGAAAAAAATTTTGCTGTTTCTGAGT
TCATCGCAAAATTTTAGGGGGCTTAATTTTTGCAGCTATACCACAATTTG
GGGGAGACAATAACTTCACAATTTTGTGCCTTTTACTGCCAAATCATGCA
TGCTGGTTGTTGAAAAAAGCATTATCAACACTTTTAATGCCAAGCATTAA
AAAAGTAGTTCATTTATTTGTCATTTTTGAGTTTTGTTTAAGATATGGCC
TTTCCAAATTTCCATTAGAATTAATTTTGTGGATAAGGCGAGACCAATTT
GATTTGTTGTTCTACTGGCAGATCGTTAGCAAAATATGGGTCGGTCGGTC
GGTAAAATAAAAATAAATTTTTCATTTATCAGGGTTGTTAAAGTTACGAA
AAATGTTTTCCAAAAAATATCTGGTTCAAAAATTCACTTTTTCTATCTTC
GATGAAGATCATGATAAAATATTAGTGTAGGAATGCTTGATTTTCTAGAT
TTTTCAATTTCTTGAATTAATTTTCAGCTTTATTCAAATTTGATTATTAC
AAATAACTAGCGTGTAAAATATATTGTATATACTTTTATCACCAATTATT
CCATCTACTTTAAATCACAAAAATGTACTAATGTATTAAGTGATAATCCA
ATAGAATTAGAACAACCTTTCTTACATGATAGGAATAATATGCANAAGTG
ATAATCCAATAGACTTAGAACAACCTTTCTTACATGATAGGAATAATATG
CACCTTTCCCGTAGAGCTTTTGGTTTGCTAGCTAAATGTGAAGTCATGTT
GGATGTTTTTAATTTTCCAATGTGACATTGCGCCTAGCAAGAGGTCCATT
CAAACTTCTCAGAATTAAAAATAAATAAATAAACCCACTCCACAGATGTG
TCTAAAATTATCAGAGCGGTAAATAAACACATCTTTCCGAAATGGGTTTT
CAGCTTCTAACTTTTGTTAGGAATCTTTGTTTAACATACTTGAATTTGAG
AGGGTTTTATGTATTAAGAAAACCTCGAACAACAACTTTCCATCAGAAAA
TGCAGGCAAACCCTGGAGAACAACTAAATATGTATCCAGAGCTTTTTCCC
AAATTGCAGGAAAAATTAAATTAAATTAGCAAAGTAGTGAGTTGATAAAG
ATAAAGCAATAATTAAACAAGCGAATAAAGTTGCGAGTTGATAAAGCAAT
AGATAAATGAGTGAATAAAGTAGCGAAGTGGCGAGTTGATAAAGCAATAG
ATAAATGAAAGAATAAATAAATTAGCGAAGTAGTGAGTTGATAAAGCAAT
AGTTAAACGAGCATATAAAATTGCGAGTGGATAAAGCAATAGACAAATTA
GTAAATAAAGTAGCGAAGTAGCGCATAGTAGATAAAGCAATAAATAAATG
AATTAAGAAAGTTGCGAGGTAGCAAGTTGATATAGCAATAAACAAATGAA
AGAATTATAGTAAAAAAAAAGGTTTTCTTTTAATTTTTTAACTTCATTTT
TGAGTTAGGAAATCTTTTTGGGTCGCTAAATCTGAAATTCAATTCGCATT
TTGCGAAGTACGAAGCTATAACTGGAACCCTTGTAATGATAATTTTATCT
CTATTATTTAGCCAATTTTTGATTACTTTGATAATTTTTCTTTATAGAGT
GGAGGTACTACAGTTCCAGTTGAAAGCAATACAGTTCGTTTTGTCGATAA
CTTCAGTCAAGGAACAAGAGGTGCTGCATCTGCAGAGTATCCTTTTCATA
TTAACAAATCTAATAAAGTTGAAATGAAAAAGGAAATCATAAACCTTCTA
GAAGGAGCATTTTCCCAGAAGCTTAAACCTAAATGAAGGACTGTAATTTT
GATATTTAAACTGGCCAGTAGTAGACCCCGTGAAAATGTCTAAGTGTCTA
GATTTAGGGATTTATGTTAGGAACAGATCATGCTGATTACCCTCTTAAAA
TGTGCCATAGGTTATAAAAACTTGAAAAAACATCAAATTTTAGGGTAGGA
ACCATTTTTGGTTTCCCTACCCGGGTATTGAGGAATTTCTGTTTTGAAGA
GTAATTTTCAAGATGAACTTCAACTATCTTTCTTAACCAAAACCTGTTTT
AGATATTTTCTTCTTCATGGATATGCAGTCATATTTCTACATAGACAAAG
ATCATTTGAGCCTTTCTGTAGACACTTTGAAGGGCATAATGCACTTGATT
TGTTGGAGTTACAGCTGGACACGAGTGGTGCTTACAGACTTACAGGTAAG
GCAACTACTAGTTAAGTTCTGGTTTATACGTATGGAGTTCTTTTTTCAAG
AATAAAAATAAAATTGAAATCCCCCAAAAAACATTATTTTTTTTCTCTTC
CGACTCAATCTGATCTGCCATTAATCTGAATTTTTTTAGACCTTCATTTT
ATAAGAGCAGGGAAAGCAGGTATATGGGGAAAGCCAGTCCATGTCCCAAT
ATGTTTCCCTTAATGGCACTTCAACACAATTTCCCTACTTTTTATTTTGT
ACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTAAAACTAATTTTCTAGAA
ATCTAAAGATTTTAAATACAACCATTCCTACTTTACTTGAAAGAAGAAAG
ATGAACTTAAATTTTGATGGGTCATTTATTAAATTCGATTTATTATATCA
AAAGTTATGCTCAATTGAATAAAAAAGTTACTTTCTGAAATTGTTAAAAA
ACGCTAAACAGCGACTTATCAAATTAAACAGAAGCATCTGGAAGCATAAT
TACATGATACATCATTATCCTTCGTTTCAGTCATTAAAAATGATAATTAG
CTGTCCAAATGACCTTTTGTTATGTAAAGGAAAGTTGAATTTCAATCAAA
GGCAGAAAATTCGTCGAAAAAGGCAAAAAAATCTGGTAAAATTCATGAAA
ACACATAAAATATTGGTTTCGAGGTAGATCCAGCCTTACATAGACTTTAT
TCAATCTAAAACCTAAAATCGGAGGAAAATTTCGGTAAAAGTAAGTCAAA
GTGATTTTGATGAAGATTTTGAAGTAATTCCCTAACTGACTCATTATTGC
CTCTAATATGTATGACCATTCTTTATAAACTTTTTCGTTTCTTACAATAT
TAACAAAAATTGTTTCCTTGCAAATGCAATCAGTCAGTCATCAGTCCACT
CAAATTAACCAAATTGATTGATTTAGAGAATCTTAAAAAACAAATAATCT
GAAAGTGTCACGAATCCAATCTTTATGTATTAGCCACTATTGAAAGCAAG
CCAATTGGTCATTTATTTATTTATTATCTGCTTTTTTTGTAGTGGATGAG
ACGAGGGCACCTGGCTTGCAAGATGTAGTACGCAGGTACAAAGAGGTAAG
GAACTTTTAAATATTTCATTGATGTAAATTTTGATCAAGACTAAACATGA
TCAGAAAGGGAAGAAGAAAATTGTACTACTGAGATTGTATAACCGTAGAG
AAGGTTCCTTAACCCTATTTTGAAAACCGTATTTACATTATTGGACAATT
TTTCAGGTTCAAAACGGATGCTTGCTATTAAAGATTGGATTCATGACACT
TTCAGATTATTTGTTTTTGTTACGAGCATCATCTGAGGCTTTGTCACCTC
TTGGTAGAAATGTCATGTTTTATTTGGCTGCTGCTGTTTCAGATTTTTAC
ATCCCAGATAACGAAATGGTAATCAAATGTTTTTTTAATCACTTATAATT
CATGAACTGCATCGAGTCTATTAAAATAGAATAATATTCTGTCTTCTAAA
ATGTCTTGATTTTAGAAGTTTTCTCATTTTTCAGGCTGAGCACAAGATTC
AATCGTCAGATAAAAACTTTGTTCTAAATATGTCGCCAACACCCAAAATG
TTATCTCCTCTTGTTCGAGAGTGGGCAAAAAATGCTTTTGTGGTTTCATT
CAAGGTATAATTGTTTAAATAAAATGATATTGATTTTATTCGAAGAAGAA
CAACATTGAATGGAAGATCAAATTTTGTCTAAATCATAGCCAAGCTTGCA
GCATTTGAGACTTTATAAATCAGGGTAATTTCCAAGCGCTTTATCTTACC
ACCGCTTTGGTCTTAAAAATTGAGTTTCAATGCAGTGGTATTAAATGTCG
CCCACCATGGTTGGGCAACTAAGAAAATATTTGCTCTCTACACGTCCTAA
ATAGGTGATTTTCTGCATTGTAGTAACCTAAAAATCTATGAAAAACAACC
TTAATTTGAAATGTTTTGGAGGAGTTTAATGTGAATGTTGATTAAAGTCA
ATCTTTATCTTTTTTAACTAAATAAACTAATCTCATTTCCATATCGTTGA
AGAAGGTAAATTTGAAATAAGGACTTTTAGGTTCAGCATAAACCTTTTTT
TAATGTATCAAATAATTTGTCAAATTAGCAATAAATCATAAAATCGAAAA
CAATAAGAGTCACGGTAGTTTTCAGTGAACGAAGAAAATGATCTTATTTA
CACCTATTTACAGCTAAAATATTACAATACACCATTTAAGAGTCTCTCTC
TACACCGTGTTCCACCGTAAAGGCGGTGGGTGAAATGCGCACTTTAGTAC
TGTGGAAGGTTAGAGGAATGTAAACATTGTCAATTTTTTTCTTTCCTTTT
ATAAAGAGAATGTTTTAGATATTTGAACATGGTATCAATGATAATTTTAT
GGATCTCTCCTGAAAATTTCGCAGAAATTCATCTAGAGGAAAAGAAGTTA
TGATTAAAAGGAGTTCTTTACCTACCGTTTCTCTGCTGGGTTTCCTTACG
AGAACCGAAATTTTACCTATCGTTCTTTTACGGGGAGAGTGAAGTTTCCT
GTGGTCGCTAAAATCAAAACAATGGAAAATTGTTTGGACGTGTGCGCAGT
CAACACTACTAAACGGTGTATAGATTGAGTTGATTTTCCTTCAAGTTTTT
GTACCGTCATTTCTCTATCTTGCATTATTTACCTTGCACATTTTTTTCTT
TACAAAATTGAGTTTGAAAACTCAATTTCCACCGAATAACGGTGGTAAAA
AAGTGCTTGGAAATTACCCTGTAAATGGCTGTATTTTTGTGAATTTTAAC
CCTTTTTTACTATTCTGATAACTTTTGATAAACTTATTTGTTTATCTATG
CAATTTTTAGTGTGTCTATGATGTGAATTTACAACTGCTTGTAACACAAT
TATATTACTTGACGATTTTATAAGCTTATCATTGTCGTCCTGTAATGATT
GATTTTTTACATTTTTTCAATGTTTTAGCTTGAAACTGATATGAATATTA
TTACAAAGAAAGCAAGAGAAGCACTACAAAAATATAATCACCAGGTAGGA
ACCTCATTTTGTTTCAAAAATATCTGATATTAAGAGACACTTGTTAAAGA
TGAACTTAGACCCGTCCTGTATTTTTATAATCTGATGTATACAGGACAGG
TATGACCTGTGAGGCAGATTTCTACCTCAAAAAATTTACAGTGGGAAATT
CGAATTTAGCGCTTTCTTCACTTACTAGGATAAAAACCAAATTTCGGAAG
TTTCACTTTCTCTAATAAAGTGTGACCAGTAAAAGAATAACAAAATTTGA
TTTGCTATGTTTTCAGCTGTTATTAGGATCTGGGAAATTCAAACTCTCAG
CCCATACCATGCTATATATTTCATCAGTATATAGAATAAGAAATCATAGC
ATGGGTCTCCAGGCTAAGAAGATGAACTTTGCATACACAACTGTGTTTTT
AATGTTTACTTGATGTAATAGACAATATAATGACTGAAGTTATATATTAT
GACTAAAGTTAATACATAAAAACAATAAAAAAGGCTGTTGATTAATATTC
TTTACACATTCAAGAATTGAGGAACTACCCGATATTTTTATAAAAAGAAT
GAAAAAGAGTCATCAGAATTCTACAAGTAGAATTTAAATCTTTAAAGTGA
CTGTGCTCCATATTGAAGTTATACTCTTTTATTATGTAATAAAATCACTT
TTTGAGTATACATTTTTGTTTTGTGCTGTGTTTTTTTTTTGGGGTTGGGC
TAGCAAACAACTTCATATAATTCTTGTCTCCTGACAACTCTTACCTTTAA
AGGAATGGCCTTTTGATTTCATATGAATATTCTATGAAATTCTTCTCTAT
TTGCTTATATGTTTTGATATTTCAGGTTGTAATTGCCAACATTTTACAAA
CCAGAAAGAAGACTGTCATTTTGATCACACCTGAAGATGAAATTCCCATC
TGGATGAGTGACCAAGAACTAGATTATGGGAAAGAAATTGAAGAAAAAAT
AGTTGGAGAATTGTTTCGACGACATTCCTCTATGATTTCTGGTAAGAAGT
TTTAATCACTTTTTATCCAAATTTGTAACAGAAATGCAAAGCTTTATTTT
ATACCTGAGGTAAAAGGAAAAATTCTGTCATACAGTAATTATGAATAGAT
GAAAAATTTTCTAAAATAATTTCTAGAGTTTATTTTAAGATAATGATAAT
AGATATATTTTTTAAATTGATATAGAAAGTATGACTTTCATAGTAAATTT
TTTACTTTATGTTCCATTATTTTTCCTTATTCAATGTAAATATTTTTGGG
ATCATTTTATATGAAAGATATATCTGAGATAAATTCAAACTCAATGAATT
CAATTTTTAAAAAAACTTCATCTTTTTTTTATGAAATTTACCATTTTTTT
AGCCAATTTAAAACTTTTTATCACCTTTACCTTTAAGACCTTTAGAAATA
ACTTCTTAGCATTTAGAATATTATTTAAATTTTGTTTGTTCTATTGTTAA
TAGATGTGTTTAATAAACATACAAGACTTGAAGTGTTATTATTTCAACTA
TTTCTCATCAAATATTTCAGGTCAAGCAGGAAGTGGACAAGTATCAACAC
CAGTTGTCAATAGCAACATATCCTTTTCTTCTGGCCAGCCACAGGTACGA
AGTTTCTTAATAATATCTCATTAGACCAAGTATGCAATGTATTGTTTACT
GTGATGATGAGAAGCTTCTTATATATAGTTTAATATAATGATCCGACGTG
CATAAATAGCAACATTCGATTGGCTCTCATCCAATATAGAAAATATTGGG
CTACGAGAAAAGATATTGGACTTGGCAAAGCCAATACTTGCTTAATCAAA
CTTAAAAACCCAAAGATTATGTTGCTCAAAAAATCAAAACATGAAAACCC
ATTTTCTTTTAAAAATATTTCTATCTTAATACAGATCTGTAAAAATTGAA
ATATCGTTAAAAGAAAATTAATTTTTATGTTTTGATCATATAATAGGATA
TACAAAAGAGTGGAATTTGATCATTCAGTAGGTGCGTCTTGAAATTCCTG
CATTAATAACACGCATGCGCAATTTTTCGTTCTTCCAAACCACATGTAGT
TAATTCCCGTAATTAATTCCCGTGATAAACAAAGAGGAATGAATCTGTAG
GGGTGGTACAATCACTTTCGGTTGAGTTGTGAACGGCGAAATATGAGATT
TGTTGTTCTTTTTTGTCGTTCTTTATGAAATTTGTCGTTCTTTTTGTCTA
TTTGCAGGATTTGTTAGATAGACCCCCTCATTTTGTTGTGTATATTATGG
AGGAACCTTGAATAATAATTTGACTATTTTTATTATTTTTCTGACTCAGT
ACCAATCACAGACGTCCATCAATGCATCCAACACATCAACTTCTTCACAT
CAATCATCCATGCCTGGCCTGGCACCCATCAATGTTTATCCTAGTAAGTT
TGTCCATCGTCTTTTTAAATAACTTTGGACTTTATTTAACTTTGTAGACA
TTCAAATTTTTAATTGAAATCTAATCAGGGGGGGTCTGTAGTAAAATCTC
AAACATATATGAATAGTAAAAGGATTTTTACGAATTTTTACATACCACCA
CCCAGACTCTTGGAAGAGGTATTTTACTACCCTGGTAGTAAATTTTTTTG
GGACAATTTGTCATAAAGACCACCTATTTTTTGGTTGCTTTTCGGAATAA
TTTTACAAAAAAACTAAAAAATGATTATTTCTGTGACACATTTTTCACTT
TGTGGAAAAATTAATGTTTTGCCCTTAGAATTAAAGTCTTTTTTATATTG
ACAAAACATCTCGAGAATTTTTTGTTTGCAGCAAACAACTTTCCAACAGA
AATTTTTTTCAAGTTATAAAANAAATTTTTTGTTTGATTTTTTCAGAAAA
GTCATCCAAAAAATTAAAGGAATTACAAAAATAGCTAAAATTTGCTAATT
TTACCAGTTTTAACTACCCAGGTAGTAAAATTCTTTCAACATTTAACACA
TAGATACCACCAATTTTAGATTTAACTACCCAGGGTAGTAAATTTTTTTT
TCGATTTTTTGTCACACCACCACCGTAGTAAACGTCATTATGTCTGAGAA
TTTACTACCGACCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCTT
GTTTAATGAAATTTAAAGATTTCTCATATAGAGATCGGGGGTAAATCTTA
GACGGAAATGTTAAAAATCTGTTCATTAGTTTCTTCTGATTTTTTATACA
AAGACGTAAAATTAAATTGTGCTAAATATGAAAAAGCTCATTTTTCGAAA
ACAAATATTTGGCACCAACTTGCAAAATTTTAAATTTTTCATTTTTTTTT
CTACATTGCCTTCATTAAACTTTTATTATTCGTTTTATAAACAGGTAGGT
CCATAAAAGTATCTCTTGTTTATTTTCAGGTAGCAATCCTGCGAAACTGC
AGAATGTGTTGTTACACTTAAAGAGCACCAACGATGCTGAGATGAGTAGT
CATCATTCAAATGAAATGTTAGGAGCTACTAACGCTAGTATTTTGAAGCG
TTCAGTTTCTGCAAAGGAAGACTCAGGTGGTCTTACTCAAGAGATGCAAG
AATTCATCCGTGAATTCAAAACAAGACGTGTCAACCTTGGTTACACTCAA
GATGACGTTGGTCGTGAATTATCTGCACTTAATGGTCCTACTTATAGTCA
ATCTTTTATCTCGAGGTATTAATATTATCCCTTAATTGTCACTTTTCTTA
ATAATAATTACAATCCTAATAATTACAATCAAGAAAATACCTCAAGTGGA
TTAAATTTCCGCGACCTTTTACAAATTTTGGCCCTTTTTGCTAAAAAATT
TTAGTCCTTGCGAAAAATTTAAAACCCCAAAATTGGTCAAAGACTCTAGG
GAAATAAAAGAAAGACCGATTCGCGAAATTTTGTCCCGTAATAATAAAAT
TATCGATTCGTGGAAAAAAGTCCATGCGAAAATTAATCCACTCAAGGTAC
AGTCGCGTTCTAGTTGTATTCTAACCAATTCACAACCATGTCATTAGAAA
TTCATTGAAGTGAGGAACTTATTGCTACTCGTTAGAGCTGGAATTAAAAT
CTTATCTACTGACTGGGAAGAGAAGAAGAGAAAATAAAATTCGTTTTAAA
TTATCTACTTTCTGGGTGGCAGTAAATTGGGAGAAGTAGTGTGATAAGTA
GAAATTTCTATGTGATAAGTAGAAATTTCTATGTACTAGCAACCGTGGGC
AGATGTCTTCATAACTTACACATTTGGTATGATATAAATTTGATTTTGTA
GATTTGAAGGGAAACAGTTGGGGATGAAAGCTGCAGAGCGCATGCGTCCA
ATTCTGGACACGTGGATCCAATCAAAAGAAGTTGATGTAGCTACTGGAGG
AGGTAACAAATTTCAAAAGAAGCGACGCAAGCGAACCAGTTTCTCACCAG
AATACATACAAGTTTTGAACGATTACTTTCAGAAGAATGCTAAACCAACT
CCTGAAGAAATGCAAATGATTGCTAATAAGATTAATATGGACTTAACAAC
CGTGAAAGTTTGGTTTTGTAATAAAAAACAAAGTTTAAAGCGTGTTGGTC
AACCTTCTCCATTTCATGCCAGCGCTGCCAAATCACCCAAATCAGAATCA
ACGCAACAAGATCGTAATAAAGTCATGAAAAGACTCAAATCGTCAGATTC
ACCCGGTGGTCTATTTGCATTGAACACACCAGCGGGTATGAAGACTTTGA
TTCCGGTATCCACACCAACCGGTACTGTAACAATGCCCTTCTTCATTAGC
CAAGACGGTAACCCCATTCCCATCGTGTCCGGAGCCAACCTGAACAATGG
AACTAACAGTGGAGTCGGTCAAACACCTGGACAACAAATCTCTTCAACCT
TACCACAGCAAATTGTGCATCTGTCACAAGTTCCAATTCTAACGTCAATG
GTGGTTAATAACACATTACAAAATAACGGAACAACTGATAATCCCGGTGC
CACGCAGATCATATCCGGAGGACGAATCATCCCGTCCGGTTCTGTTCTTC
AACTTCCGGGCGGCGCAATCGCATCACAACAAGCTCTTCAACAAAGTAAT
TTAAACCAAGCCTCGCAAAATACTCTTAATGATCCCAATGTGTTGATGGG
ATCTGATGGAAATAACAGTTTACAGACCAGAACGTCTGTTCCTATGGGAG
CACCAGTCAATGCTAACACGCCCGGACGAAATAACGAAAACATGCTTTTA
AATAAGGACCCGATGAAACAGATCTCGGAAAAAGACTTAGAATCGGACGA
GGTCTGTGTGGCGGACGAATCGATGAATAAAAATGAAAAACTTGTTCAAC
GTAACCCTATGGGTGTACCTGAAAATACCTAGTGAGAATATTTCTGAATT
TCTGTTTTGCTTACATGTGATGGGATTGTATATATGATTTGTCATTGAGT
CAGGCTTGTGTGTTTTCTGTTACTTTTTATATTTCCTTTTTTCAATTTTT
TAGAAATTTTAAATTACATTTAGTCATAGATCTTTATTCATTCAGTTTCA
TGCCGGGTCGTTTCCTTAGATGATATTTACCTGCGCCGTAAAGGTTTCCA
ACACTGTACTCAAATCTTTTAATTTTTGGAAGGCATAGATTTTTGTATTT
ATTTCTTTTGACTTGATACGATATTTTTTAAGGATATTTTACAGAGAGAC
TTCTAACAAATTCTTTTCCTAACAGATTGTAAATAGTTTAGGCTTCTTCA
ATGCTAAAATGAAATATGAAGACCTTAGATAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038904XLOC_038904Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062080-exon-scaffold_361-1575043694:1705967..1706004TCONS_00062080-exon-scaffold_361-1575043694:1705967..1706004Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1704019..1704107TCONS_00062080-exon-scaffold_361-1575043694:1704019..1704107Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1703510..1703652TCONS_00062080-exon-scaffold_361-1575043694:1703510..1703652Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1702410..1702462TCONS_00062080-exon-scaffold_361-1575043694:1702410..1702462Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1702087..1702248TCONS_00062080-exon-scaffold_361-1575043694:1702087..1702248Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1701851..1701970TCONS_00062080-exon-scaffold_361-1575043694:1701851..1701970Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1700461..1700526TCONS_00062080-exon-scaffold_361-1575043694:1700461..1700526Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1699464..1699629TCONS_00062080-exon-scaffold_361-1575043694:1699464..1699629Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1698861..1698934TCONS_00062080-exon-scaffold_361-1575043694:1698861..1698934Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1698062..1698155TCONS_00062080-exon-scaffold_361-1575043694:1698062..1698155Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1696690..1696975TCONS_00062080-exon-scaffold_361-1575043694:1696690..1696975Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1575043694:1694618..1696103TCONS_00062080-exon-scaffold_361-1575043694:1694618..1696103Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1705967..1706004TCONS_00062080-exon-scaffold_361-1510915933:1705967..1706004Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1704019..1704107TCONS_00062080-exon-scaffold_361-1510915933:1704019..1704107Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1703510..1703652TCONS_00062080-exon-scaffold_361-1510915933:1703510..1703652Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1702410..1702462TCONS_00062080-exon-scaffold_361-1510915933:1702410..1702462Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1702087..1702248TCONS_00062080-exon-scaffold_361-1510915933:1702087..1702248Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1701851..1701970TCONS_00062080-exon-scaffold_361-1510915933:1701851..1701970Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1700461..1700526TCONS_00062080-exon-scaffold_361-1510915933:1700461..1700526Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1699464..1699629TCONS_00062080-exon-scaffold_361-1510915933:1699464..1699629Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1698861..1698934TCONS_00062080-exon-scaffold_361-1510915933:1698861..1698934Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1698062..1698155TCONS_00062080-exon-scaffold_361-1510915933:1698062..1698155Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1696690..1696975TCONS_00062080-exon-scaffold_361-1510915933:1696690..1696975Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1510915933:1694618..1696103TCONS_00062080-exon-scaffold_361-1510915933:1694618..1696103Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1705967..1706004TCONS_00062080-exon-scaffold_361-1491911889:1705967..1706004Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1704019..1704107TCONS_00062080-exon-scaffold_361-1491911889:1704019..1704107Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1703510..1703652TCONS_00062080-exon-scaffold_361-1491911889:1703510..1703652Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1702410..1702462TCONS_00062080-exon-scaffold_361-1491911889:1702410..1702462Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1702087..1702248TCONS_00062080-exon-scaffold_361-1491911889:1702087..1702248Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1701851..1701970TCONS_00062080-exon-scaffold_361-1491911889:1701851..1701970Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1700461..1700526TCONS_00062080-exon-scaffold_361-1491911889:1700461..1700526Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1699464..1699629TCONS_00062080-exon-scaffold_361-1491911889:1699464..1699629Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1698861..1698934TCONS_00062080-exon-scaffold_361-1491911889:1698861..1698934Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1698062..1698155TCONS_00062080-exon-scaffold_361-1491911889:1698062..1698155Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1696690..1696975TCONS_00062080-exon-scaffold_361-1491911889:1696690..1696975Clytia hemisphaericaexon
TCONS_00062080-exon-scaffold_361-1491911889:1694618..1696103TCONS_00062080-exon-scaffold_361-1491911889:1694618..1696103Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1694618..1706004 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.54832	9.04749	2.38185	2.00074	128.276	96.5092	52.7506	57.6692	18.5764	24.5292	26.173	19.3515	19.5354	19.4516	13.6492	15.0923	17.673	19.537	14.7939	11.3133	19.8083	22.6715	26.0208	26.2384	17.4851	20.3613	11.1268	9.78815	16.1739	22.1592
Blast
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BLAST of TCONS_00062080 vs. Swiss-Prot (Human)
Match: PPCS (Phosphopantothenate--cysteine ligase OS=Homo sapiens GN=PPCS PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 8.669e-81
Identity = 132/266 (49.62%), Postives = 177/266 (66.54%), Query Frame = 3 
Query:   39 SGGTTVPVESNTVRFVDNFSQGTRGAASAEYFLLHGYAVIFLHRQRSFEPFCRHFEGHNALDLLELQLDT-SGAYRLTVDETRAPGLQDVVRRYKEVQNGCLLLKIGFMTLSDYLFLLRASSEALSPLGRNVMFYLAAAVSDFYIPDNEMAEHKIQSSDKNFVLNMSPTPKMLSPLVREWAKNAFVVSFKLETDMNIITKKAREALQKYNHQVVIANILQTRKKTVILITPEDEIPIWMSDQELDYGKEIEEKIVGELFRRHSSMI 833
            SGGT VP+E+  VRF+DNFS G RGA SAE FL  GY V+FL+R RS  P+   F     L  L       SG   L  +E   PG  + +R Y+E       L + F TL+DYL LL+A+++AL+PLG + MFYLAAAVSDFY+P +EM EHKIQSS     + M   PK+LSPLV++WA  AF++SFKLETD  I+  +AR+AL+ Y HQVV+ANIL++R+  V ++T + E  + +S++E++ G EIEEKIV  L  RH++ I
Sbjct:   42 SGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLAVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVSEMPEHKIQSSGGPLQITMKMVPKLLSPLVKDWAPKAFIISFKLETDPAIVINRARKALEIYQHQVVVANILESRQSFVFIVTKDSETKLLLSEEEIEKGVEIEEKIVDNLQSRHTAFI 307
The following BLAST results are available for this feature:
BLAST of TCONS_00062080 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPCS8.669e-8149.62Phosphopantothenate--cysteine ligase OS=Homo sapie... [more]
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