TCONS_00061799 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061799
Unique NameTCONS_00061799
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061799 ID=TCONS_00061799|Name=TCONS_00061799|organism=Clytia hemisphaerica|type=transcript|length=1106bp
TAGGCGTACGTCAAGTTCTCATCAGCCAATGTCGAAATTAAACCAACCTT
CAAATCGCTCGTGCAAAAGGAGGGGCGAACGTTACCATGTCTTTGTCTAC
CAGAAGATGAAGTTGTTTACGGAAATCAAGAAATCATCAAACATCTCAAT
TTAAAGCACTTTGATGCCAACACTTGGTTAGATGATGGATCCAAAAATTA
TTCTTTGGTTTTGAAAGCCATTATTGAAGAAAGATTGAAACCTGCAGTGC
AAGCAACTTTATGGATGGAAGTTGAAAATTACAGTGAAATTGTTCGTCCT
GTTTTCGCACGTAATTGTCGCTACCCCATCAATTTTACGGAAGCGAAGAC
GATGCATGATCGGATCGAAGAACATGTTTCAGTATCGAAACACTTGTTGG
AAGATGAAGATGCTACGAAAATGAAAAAGtTGATGGCAGAAGGAGCAGAC
GCGATTCAAACTCTTTCTCAGTTCCTCAAAAATCGAGATTTCATCTTCGG
AGCCAGACCTTGTTCAGTTGATGCTCTATTATTTTCGTGTTTGGCGCCCC
TTGTCAAGATACCATTGAAAAGTGGGGAACTGCACAATGAGGTGCGAAAA
ACGGAAAATCTCGTTCAATACGTCGATCgtattttgatgaaatatttACG
CGAGATTGAAAGAGAGGAAAAGGATGATACGAATGAAGAGAAAACACAAA
AAGAAGAATCGAGCGCTAAGAAAAGCAGCAAATCAGAAGACGAGGAGAAC
AAATATGATTGGTTGTTTTCTGTTGGCATAGCAACAGCTGCCATGGTTTC
CTATGCAATTCATGTAGGCTTGATTCAACTTCGTCGTACAGCTGctagtt
aaatttttttttgtataaacaaatatttttttgttacatttttattgatt
tcttattttctttgcGAAACAGAGTGTACATATTATGAAAAACAtcagtg
tgaaaattttttccctCTCAGATGGATTTCCGCTCCAGCGATAAAGTCTG
TCATTCTGAAGCGTAATgtatagcctgggaatccaagctcataattttag
aaaaaacaaaaaatacctcacctcacaaagttctaaaattatagagcttg
gtgcag
Run BLAST on NCBI

protein sequence of TCONS_00061799-protein

>TCONS_00061799-protein ID=TCONS_00061799-protein|Name=TCONS_00061799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MEVENYSEIVRPVFARNCRYPINFTEAKTMHDRIEEHVSVSKHLLEDEDA
TKMKKLMAEGADAIQTLSQFLKNRDFIFGARPCSVDALLFSCLAPLVKIP
LKSGELHNEVRKTENLVQYVDRILMKYLREIEREEKDDTNEEKTQKEESS
AKKSSKSEDEENKYDWLFSVGIATAAMVSYAIHVGLIQLRRTAAS
Run BLAST on NCBI

transcript from alignment at scaffold_360:185163..193263-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061799 ID=TCONS_00061799|Name=TCONS_00061799|organism=Clytia hemisphaerica|type=transcript|length=8101bp|location=Sequence derived from alignment at scaffold_360:185163..193263- (Clytia hemisphaerica)
TAGGCGTACGTCAAGTTCTCATCAGCCAATGTCGAAATTAAACCAACCTT
CAAATCGCTCGTGCAAAAGGAGGGTAAGATTGAAGCGAATTGTTATACAG
TGGATCCTCCTTAACTCGAACCACGCACGGGGGAATGCAATTTTGTTCGA
AGTTAATGGAATTTCGTGTTATGAAATACAGTTTAAAAGTCATTGTTAAC
TGAAGGGACAAGAAAATTTGTTTGAGCAAAGGAGACATTCGAGTTATAGA
GGTTCAAGATAAAGAGACTCTACTTTATCACTAAGTTACTACCAATCTTT
TTCTTCAATGGTAATTCGCTTTTAGTTGACTGGAAGTCGAAATAGTTGTA
AGGTACTCCCTTGATTCAAAGGTTTAGTTAGTGTTGTTCCTCTTATTTGC
TGGGAGATACAATTTCCCCATAGATAATAGGAAAAATAAGGGGAAATTGA
TTTTCTAAGTTAGAAGGAGGCAATAATAGATTTTTTTTCATAGGATCTAA
GGTGTATCATAATGACTACTTGGCTTTACGATGTCAATAATTGTGGTTAG
AATAAAAATGATAAAAATGGTTGAGTTTCAATATAAGTAAAGTGAAACGT
AGAAAGAGAGCCCTGTAGACATAAATATGATATCAATAAATCAAGTACCA
TATTTTTTTAGGGCGAACGTTACCATGTCTTTGTCTACCAGAAGATGAAG
TTGTTTACGGAAATCAAGAAATCATCAAACATCTCAATTTAAAGGTTCGT
TTTGTTCAATTCCACTTTTCGTGTACCTTTGTCTTGCTTTTAATGGATTT
CTTGTTTTCATCCAATAAAAAGACGTGGTAATTTCGCATAAAAAAAACGC
ATAACTCTCTAAAAAGTTTATTTACTGAACACAAACAAAATGATCTTTAG
TAAGTTTGACCATCAAGCTTTGTTTTTGCTCAGCTTTGTGCAGGGGTACA
GCCGCAGGGTACTAACCCATAGGGTACTAACCTGATTTTTAAGAAAAATT
GTCTTAGGTACCACCACCCCCTTTTTAGTACCGGGTACTTACTTTTTCTT
AAGGAAAAAGGGACCCCCACCCCCCTTTTAGTACCGGGTACTTACTTTTT
TTTAAGGAAGAAGGGACCCCCACCCCCCTTTTAGTACCGGTACCGGCTTT
AAAATTACCAAGGAAAATAGAAGACACCACCCTTAAAACTTGCCAATCAT
GGTCCCAATCTTTCAAAAGCCAGCAAAAGCAGCTCTTTGTTGTTATAATG
ACTTGTATATACCATGTTTTTAGCTCAGATCCTCTAAAAAGTTCTTTAAA
TCAAACACAACTTTTAATTACAAAGGTAAAACAAGGAAATTCCTTGGCAA
AAGTAATATTATATAGCTGTAATAACGGCAATAAAAGTATATATCTATCA
GAAGATGTAAAAATCAAGTTGTTAAAAATTGAAGAATAGTATGAAAGCTT
GGATTGGATGGATTTCAATAGATTGGTAATTTATTCAAATTATTCAAAAC
TGTGTCAATCTTATGAAAGAAGTTGAAATAGAAAAAAGTTGCATTGTTGG
CTCTGGTTGGCTTTGCTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTCTTTTCATCAGAAGGCAATGACAAACATATACCTCATTC
TAACTTGAGATATCAAAGACGAACTATCCTTCTCACTAATTAAAACAATA
CTGATTTTGAGCAATAGGTTTCTTTACATTAGCTATTTCAATATTTGTAT
AACTTAGTGGTCATAAAATTCTCCTCTTAGAAAGTAGGGAAAAAAATAAA
CAAAAAATTAAACAAATGTAACATATTCAGGGCCTGAGTACTTGAAGAAA
AATTGAAATGATACCCACCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCC
CAAAATTAGTACCGGGTACTAACTTTTTTGAATTTCCAAATTAGACACCA
CCACCCGGCTATGGGTTAGTACCCTGCGGCTGTACCCCCCCCTGCTTTGT
GAGTTAAACCATAATAATTTATCATCTCCTAATTCTGACGTCATACTGTC
GCAGAGAATCCTGTATAAACGGTACTGGCAGACTTAGGCGCTGAAAAATT
CAACTAATTCAACAGAATATAACAAATTCAACTCATTTTGCCTACCCACC
CTCTGTTTTTGCTATTTTTACCTTAACGTTAATCCGTTTTGGCACCTTCA
TAAACATCAATACCCACATAAAACATTTAAAAAGGATACCATAAATTTCT
ATCAACTTTTTCAACATGTTTCTTTTTNGCTTGTACAAATTCTGATTTAA
AAACAATGTTGTCTGCCAATGGTTATGACACAACAGGTGGTGAAGATTCT
GTAAGCTCACATTTCAAACATTTTTGGACCTACCTGGAGGTCCTATAAAT
TAACCTTTGTCCGTCCGTCCGTCCGTCCGTCTTTTCTCGAGATTGGCTCA
TTAGTTTTTTCTGATTTTTTGCACAAAGATGTGTAACTATAAACCCTCGA
ATGTGACGGAGCCCGATTTTCGAAAGAAAAAAAATTTGCGCAAATTTGGG
CCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAATATTGGAT
CATTGTTTTTTTCAGATTTTTTTTTGCATGAAAGTAGGTAAAAGATGGCT
CAAGCAGATTTTTGTAAAAAAAGAATTTTTCAGCTCAAAAACGCATCTTT
ATCTAAGAATCACCATTAATAAGCATACATCAATGTTCTTAGCTAAATTA
CTAAATTTTTTGATGAGATAGATGTTTTTTTGCTCACGAAGTCTTGAATA
TGAAAGAATATTTCAAGAGTATGAATTTTGGTTTCTAAACGGTTTTTTAT
AAGAAACAAACGACTACTTTTAATAGATCGTCACTATTTGTGTTCTGAAT
GATTGTTTAACGGTCATGCGCACGTAGATATCAATTATATATGTGTTAAA
TGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTCATCATACAAGT
TGATCCAACCGAAGGTTTTTAGAAGAAATTTCAAACATAGAGTGTAAACG
TGTTGTAAACGTATTCAGTAAAATTTTCTTTTTTCCTACATTAGCACTTT
GATNTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCAGCCTTTT
GAGCCTTAAATGTTTCTTACATGTTTCTAAACTTTTTGACATAATAAGCC
TATTTTTCATGTTTTCATTGGAAGGTTCTTAAAAAAACGAATTAAAAATG
TCATTTTTTCATTTTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTT
TTAGGCAATCTGAGCCTCGTGTTTCTTAAAAGTGTGTTTCTTAAAAAAAA
ACAACGTGNTCACTATTTGTGTTCTGAATGATTGTTTAACGGTCATGCGC
ACGTAGATATCAATTATATATGTGTTAAATGCGTAACCAGGTAGGTCCAT
AAAAGTATCACTTGTTTCATCATACAAGTTGATCCAACCGAAGGTTTTTA
GAAGAAATTTCAAACATAGAGTGTAAACGTGTTGTAAACGTATTCAGTAA
AATTTTCTTTTTTCCTACATTAGCACTTTGATGCCAACACTTGGTTAGAT
GATGGATCCAAAAATTATTCTTTGGTTTTGAAAGCCATTATTGAAGAAAG
ATTGAAACCTGCAGTGGTATGTTTTAAACCCCGCATTTACGAATTTCTCA
ACAGGTTATCTAGGCAACATTTGCTGGTGGTCCCTAGAGGTCTTTGATCG
ACCGATTTCATCTGAAAATGGGCCAGTCTTTCGACCCTTTTGTCCGATTC
AGTCAAGTAGTTAGAAACCATTGAACGAAATAACTTCTTAGTGTAGACTG
GTTCAGGAGCTTTTAAATTTTCGTGTCAAAATTTCTTTTGAAGTCTTTGA
GGGATTATTTTTCAAAAAAAATAAGTGTCTGTCTGGAATTTTAGTTTGAA
CATAGAATTGGGAATAACATAAATTAAAGCATTTTTTAAAACTTTCCCTT
TTAACGTCTAAAGAAAAGACTAATATGGTTGACTTTTGTTCGTAGCAAGC
AACTTTATGGATGGAAGTTGAAAATTACAGTGAAATTGTTCGTCCTGTTT
TCGCACGTAATTGTCGCTACCCCATCAATTTTACGGAAGCGAAGACGATG
CATGATCGGATCGAAGAACATGTTTCAGTATCGAAACACTTGTTGGAAGA
TGAAGATGCTACGAAAATGAAAAAGGTAAGGCGATCAAAAGGTTGTGTTG
TTTGCCCCTCCCTGGATTTTGAAATTATTTCTTTGAATTTTACGACATAT
TTTGGTATACTTCCTTAAATATAATTGCTAATTTTAGGGCATATTATATG
GATGGGGTTTTGTCCATCTGGCTTGAAATCACGGACCTATTTAGAAAAGT
GGTACCATAATAATAGCACTACTCGATTTGGGTTTATTTGTAATTCAGTG
AAATTTTCCGTTTGAATTTTTTTCACCGACATTGAGTAGTGCCACGGCTA
CCATTAGGGTACCAATTTTTAAAAATTGTAAGCAAACATTTTGTTTGACC
GGGATTGAGAAACTGTATCAAGGGTATATAAAGGTCAGTGCGTGAAATGT
TATAAAATAGGNATTGAGAAACTGTATCAAGGGTATATAAAGGTCAGTGC
GTGAAACGTCATAAAATAAGGTATAATATAAGGGGACGAAGATGATGTTC
TTGCACACTTTTTCTGTAAGAAAATAGATGGGATCAAGATATTCTATTAT
ATTTTGTTTTTTTCATTTCCAGTTGATGGCAGAAGGAGCAGACGCGATTC
AAACTCTTTCTCAGTTCCTCAAAAATCGAGATTTCATCTTCGGAGCCAGG
TAAAAAGAATTGAAACCAAAGTATTCATGATATGCACCATTGCAATTTGC
TGATTGGTTGAAAGTGACGTATTGACTGATTTTACGTCACTTCCAGCCAA
TCAGCTATTGGGTCCGTGATGTAATGTCAGAAGATATTTCAATGGCGCAT
ATCATGAATAGTTGACGCTTCCTAATTCGATTTCAAGTGGAATTGGATTT
TCATCGAATAAGGAAGATGATGGAAAAGTAGAGCGTCGTTTATGAGAGTT
TCTTGTTGACGGCGCCTTTCAATATCATCGAATAATGTAGCGTATCGAAT
TGTAGAGTGTCGAATTAGAGAGCGTGAGCTGTAGTTTAGGTTTTAGGTTT
TCATTGAATAAGGGAGCGTATTGAATGGTAGAGCTTCTCTTATGAGAGTT
TCTCATTGACCATGGCTTTCAATATTATCGAATAGTAGAACGTATCGAAC
ATTAGAACTTCGAATTAGAGAGCGTCAACTGTTGACAAAATTGTAAAATG
TCACTCCATACATGTCCATAAAATGTCACGAGTAGTTCATTGTCGTATGA
AGAAAGGTAGATGTGTAAAGTGCAAAGTGCTATGTAGTGGAAGGGATGTA
AAATGAGAAAAAATATCGAGGTTAAGTATATATGCAGATAATTCGCGATG
AATATTATCGAATAGTAGAACGTATCGAACATTAGAACGTATCGAATAGT
AGAACGTATCGAACATTAGAACGTATCGAATTGTAGAGTGTCGAATTAGA
GAGCGTCAACTGTAAACGAGTTTCATCGCTCTTAAATTGTTTCGGTTATA
TAAATTAGCGAAAGTCGTCCATTATAGAATAAACTTTCGAATTTGTCGAA
ATTGAAGTGATCCCTTCCGCAAACCAAGTGTTTTTATTTCCACGGTGATG
GTGGAAAACCTTTAAGATTAATCTGATTAAGATAAAGAGAAGACCACCAA
AACTACTAACCAGGCTACAAAACTACCAAATCTCCTTGATACTATTTTTT
TATACTTATCGAAAGAGTTAGGTTTTGTAGTCATTAGAAAATATGATTGA
ATTATAGTCCTCAAAGTACTGGATGTTGATGATATTTTTATGAAGTCTAG
ATTAAGTGTGGAAACTTTTTTAAGTCCATTTTAGGTCCATTCTCTCGTTT
TAAATCGATATTTTTACTTCCCTTACAGACCTTGTTCAGTTGATGCTCTA
TTATTTTCGTGTTTGGCGCCCCTTGTCAAGATACCATTGAAAAGTGGGGA
ACTGCACAATGAGGTGCGAAAAACGGAAAATCTCGTTCAATACGTCGATC
GTATTTTGATGAAATATTTACGCGAGATTGAAAGAGAGGAAAAGGATGAT
ACGAATGAAGGTAAGGGAGATAAATCCATTCTCTTATTTTTGCCAAACAA
TATTTGTCTTTTTTAACTGGAACCTCTATAACTCGAATGTCTCCTTAACT
CGAACGAATTTTATGGTCCCTTCATTTAACAATGCCTTATAAAACTTACT
CCATAACTTGAAATTTCCTTAATTCGAACAAAGTTGTGTTTGCCACCACT
GTGTTGGCTTTTACATATTTTTCATCTGGTAAGGTCTGTAGGTGCGAATT
TTTTTAATTAATGGTTGAATTTGCAGCCAAATCTTTCATTGGCATGACCT
CGATCTTTCTCGAGTCTTTGGCTTGAATCGCTGTCCAATGACTCTGAGAT
AAAATCGAAGTTGTGCTCATAATAGATATACCGTACTACATGCCATTTTG
TAGACGTCCGCTATTTAGACGCGCGAAAGTAAGCGATGAATTGGAACGAA
GTTTTTCATCAATCTTTTTCATTTTTTTTACAGAGAAAACACAAAAAGAA
GAATCGAGCGCTAAGAAAAGCAGCAAATCAGAAGACGAGGAGAACAAATA
TGATTGGTTGTTTTCTGTTGGCATAGCAACAGCTGCCATGGTTTCCTATG
CAATTCATGTAGGCTTGATTCAACTTCGTCGTACAGCTGCTAGTTAAATT
TTTTTTTGTATAAACAAATATTTTTTTGTTACATTTTTATTGATTTCTTA
TTTTCTTTGCGAAACAGAGTGTACATATTATGAAAAACATCAGTGTGAAA
ATTTTTTCCCTCTCAGATGGATTTCCGCTCCAGCGATAAAGTCTGTCATT
CTGAAGCGTAATGTATAGCCTGGGAATCCAAGCTCATAATTTTAGAAAAA
ACAAAAAATACCTCACCTCACAAAGTTCTAAAATTATAGAGCTTGGTGCA
G

Coding sequence (CDS) from alignment at scaffold_360:185163..193263-

>TCONS_00061799 ID=TCONS_00061799|Name=TCONS_00061799|organism=Clytia hemisphaerica|type=CDS|length=2352bp|location=Sequence derived from alignment at scaffold_360:185163..193263- (Clytia hemisphaerica)
AGAAAACACAAAAAGAAGAATCGAGCGCTAAGAAAAGCAGCAAATCAGAA
GACGAGGAGAACAAATATGATTGGTTGTTTTCTGTTGGCATAGCAACAGC
TGCCATGGTTTCCTATGCAATTCATGTAGGCTTGATTCAACTTCGTCGTA
CAGCTGCTAGTTAAACCTTGTTCAGTTGATGCTCTATTATTTTCGTGTTT
GGCGCCCCTTGTCAAGATACCATTGAAAAGTGGGGAACTGCACAATGAGG
TGCGAAAAACGGAAAATCTCGTTCAATACGTCGATCGTATTTTGATGAAA
TATTTACGCGAGATTGAAAGAGAGGAAAAGGATGATACGAATGAAGTTGA
TGGCAGAAGGAGCAGACGCGATTCAAACTCTTTCTCAGTTCCTCAAAAAT
CGAGATTTCATCTTCGGAGCCAGATGGAAGTTGAAAATTACAGTGAAATT
GTTCGTCCTGTTTTCGCACGTAATTGTCGCTACCCCATCAATTTTACGGA
AGCGAAGACGATGCATGATCGGATCGAAGAACATGTTTCAGTATCGAAAC
ACTTGTTGGAAGATGAAGATGCTACGAAAATGAAAAAGAGAAAACACAAA
AAGAAGAATCGAGCGCTAAGAAAAGCAGCAAATCAGAAGACGAGGAGAAC
AAATATGATTGGTTGTTTTCTGTTGGCATAGCAACAGCTGCCATGGTTTC
CTATGCAATTCATGTAGGCTTGATTCAACTTCGTCGTACAGCTGCTAGTT
AAACCTTGTTCAGTTGATGCTCTATTATTTTCGTGTTTGGCGCCCCTTGT
CAAGATACCATTGAAAAGTGGGGAACTGCACAATGAGGTGCGAAAAACGG
AAAATCTCGTTCAATACGTCGATCGTATTTTGATGAAATATTTACGCGAG
ATTGAAAGAGAGGAAAAGGATGATACGAATGAAGTTGATGGCAGAAGGAG
CAGACGCGATTCAAACTCTTTCTCAGTTCCTCAAAAATCGAGATTTCATC
TTCGGAGCCAGATGGAAGTTGAAAATTACAGTGAAATTGTTCGTCCTGTT
TTCGCACGTAATTGTCGCTACCCCATCAATTTTACGGAAGCGAAGACGAT
GCATGATCGGATCGAAGAACATGTTTCAGTATCGAAACACTTGTTGGAAG
ATGAAGATGCTACGAAAATGAAAAAGAGAAAACACAAAAAGAAGAATCGA
GCGCTAAGAAAAGCAGCAAATCAGAAGACGAGGAGAACAAATATGATTGG
TTGTTTTCTGTTGGCATAGCAACAGCTGCCATGGTTTCCTATGCAATTCA
TGTAGGCTTGATTCAACTTCGTCGTACAGCTGCTAGTTAAACCTTGTTCA
GTTGATGCTCTATTATTTTCGTGTTTGGCGCCCCTTGTCAAGATACCATT
GAAAAGTGGGGAACTGCACAATGAGGTGCGAAAAACGGAAAATCTCGTTC
AATACGTCGATCGTATTTTGATGAAATATTTACGCGAGATTGAAAGAGAG
GAAAAGGATGATACGAATGAAGTTGATGGCAGAAGGAGCAGACGCGATTC
AAACTCTTTCTCAGTTCCTCAAAAATCGAGATTTCATCTTCGGAGCCAGA
TGGAAGTTGAAAATTACAGTGAAATTGTTCGTCCTGTTTTCGCACGTAAT
TGTCGCTACCCCATCAATTTTACGGAAGCGAAGACGATGCATGATCGGAT
CGAAGAACATGTTTCAGTATCGAAACACTTGTTGGAAGATGAAGATGCTA
CGAAAATGAAAAAGAGAAAACACAAAAAGAAGAATCGAGCGCTAAGAAAA
GCAGCAAATCAGAAGACGAGGAGAACAAATATGATTGGTTGTTTTCTGTT
GGCATAGCAACAGCTGCCATGGTTTCCTATGCAATTCATGTAGGCTTGAT
TCAACTTCGTCGTACAGCTGCTAGTTAAACCTTGTTCAGTTGATGCTCTA
TTATTTTCGTGTTTGGCGCCCCTTGTCAAGATACCATTGAAAAGTGGGGA
ACTGCACAATGAGGTGCGAAAAACGGAAAATCTCGTTCAATACGTCGATC
GTATTTTGATGAAATATTTACGCGAGATTGAAAGAGAGGAAAAGGATGAT
ACGAATGAAGTTGATGGCAGAAGGAGCAGACGCGATTCAAACTCTTTCTC
AGTTCCTCAAAAATCGAGATTTCATCTTCGGAGCCAGATGGAAGTTGAAA
ATTACAGTGAAATTGTTCGTCCTGTTTTCGCACGTAATTGTCGCTACCCC
ATCAATTTTACGGAAGCGAAGACGATGCATGATCGGATCGAAGAACATGT
TTCAGTATCGAAACACTTGTTGGAAGATGAAGATGCTACGAAAATGAAAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038775XLOC_038775Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061799-exon-scaffold_360-1575043694:193191..193263TCONS_00061799-exon-scaffold_360-1575043694:193191..193263Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:192520..192602TCONS_00061799-exon-scaffold_360-1575043694:192520..192602Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:188598..188690TCONS_00061799-exon-scaffold_360-1575043694:188598..188690Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:188039..188218TCONS_00061799-exon-scaffold_360-1575043694:188039..188218Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:187415..187491TCONS_00061799-exon-scaffold_360-1575043694:187415..187491Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:186054..186235TCONS_00061799-exon-scaffold_360-1575043694:186054..186235Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1575043694:185163..185580TCONS_00061799-exon-scaffold_360-1575043694:185163..185580Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:193191..193263TCONS_00061799-exon-scaffold_360-1510915933:193191..193263Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:192520..192602TCONS_00061799-exon-scaffold_360-1510915933:192520..192602Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:188598..188690TCONS_00061799-exon-scaffold_360-1510915933:188598..188690Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:188039..188218TCONS_00061799-exon-scaffold_360-1510915933:188039..188218Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:187415..187491TCONS_00061799-exon-scaffold_360-1510915933:187415..187491Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:186054..186235TCONS_00061799-exon-scaffold_360-1510915933:186054..186235Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1510915933:185163..185580TCONS_00061799-exon-scaffold_360-1510915933:185163..185580Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:193191..193263TCONS_00061799-exon-scaffold_360-1491911889:193191..193263Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:192520..192602TCONS_00061799-exon-scaffold_360-1491911889:192520..192602Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:188598..188690TCONS_00061799-exon-scaffold_360-1491911889:188598..188690Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:188039..188218TCONS_00061799-exon-scaffold_360-1491911889:188039..188218Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:187415..187491TCONS_00061799-exon-scaffold_360-1491911889:187415..187491Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:186054..186235TCONS_00061799-exon-scaffold_360-1491911889:186054..186235Clytia hemisphaericaexon
TCONS_00061799-exon-scaffold_360-1491911889:185163..185580TCONS_00061799-exon-scaffold_360-1491911889:185163..185580Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061799-proteinTCONS_00061799-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:185163..193263 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
121.094	120.322	134.854	136.993	23.9551	18.4495	40.6722	42.692	48.1709	41.0983	36.397	41.3569	29.6933	27.7991	39.01	39.9658	71.1765	75.5939	18.0248	23.6676	46.4455	49.0501	60.0693	54.6612	36.257	37.2361	25.6779	20.7406	31.839	27.0967
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR033468Metaxin_GST
IPR010987Glutathione-S-Trfase_C-like
Blast
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BLAST of TCONS_00061799 vs. Swiss-Prot (Human)
Match: MTX1 (Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.481e-21
Identity = 78/286 (27.27%), Postives = 129/286 (45.10%), Query Frame = 1 
Query:    7 YVKFSSANVEIKPTFKSLVQKEGRTLPCLCLPEDEVVYGNQEIIKHLNLKHFDANTWLDDGSKNYSLVLKAIIEERLKPAVQATLWMEVENYSEIVRPVFARNCRYPINFTEAKTMHDRIEEHVSVSKHLLEDED-----ATKMKKLMAEGADAIQTLSQFLKNRDFIFGARPCSVDALLFSCLAPLVKIPLKSGELHNEVRKTENLVQYVDRILMKYLREIEREEKDDTNXXXXXXXXXXXXXXXXXXXXXNKYDWLFSVGIATAAMVSYAIHVGLIQLRRTAAS 849
            Y +F+ A +++     +  Q    TLP L     EV+    +II HL  + ++A+  L       +L   +++EE+L P +  T W++ +NY E+ R  +A    +P+NF     M  +  E +     LL  E          K+L  E  + +  LSQ L ++ F FG  P S+DA +FS LA L++  L SG+L   +R   NL  Y   IL  Y         D       ++  +  +   +     N+   + SV    AAMV YA+  G++ ++R   +
Sbjct:  178 YARFTGAPLKVH-KISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKEKYNADYDLSARQGADTLAFMSLLEEKLLPVLVHTFWIDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQYMERL----QLLTGEHRPEDEEELEKELYREARECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSLYF------PWDGAEVPPQRQTPAGPETEEEPYRRRNQ---ILSVLAGLAAMVGYALLSGIVSIQRATPA 449
The following BLAST results are available for this feature:
BLAST of TCONS_00061799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTX12.481e-2127.27Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2[more]
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