TCONS_00061752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061752
Unique NameTCONS_00061752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length382

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061752 ID=TCONS_00061752|Name=TCONS_00061752|organism=Clytia hemisphaerica|type=transcript|length=382bp
caaattattgaaaatgatttttcattgctaacgaaaaagtctgaaaatct
aaTAAGTAATGTGTAATGTACGAGTAGATATGTGATAAAAGGTATCAAAA
TAACGTCATCACTATCCAAAGCATTGACATTTGCTCCATTTATTGATGAA
TGTCTATATACCATTGGAaagtattttcatgctgatgttGGTAAACCATG
AAGAAACACTGATTCGACTGTAGCACGAAAAAGGTTGTGTTTAATCTTAC
CATGAAGGTTTGATTCAGTTTTAATTACTTAGTACTtattttttttgaga
ttctcaCATTAACACTCCAGTGGAGGCTTTGTAACTGCCAAGGCAGTTGA
ATTCTTCTACCTTTTACATTACATGAGTCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_36:1167780..1168161

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061752 ID=TCONS_00061752|Name=TCONS_00061752|organism=Clytia hemisphaerica|type=transcript|length=382bp|location=Sequence derived from alignment at scaffold_36:1167780..1168161 (Clytia hemisphaerica)
CCAGACTCATGTAATGTAAAAGGTAGAAGAATTCAACTGCCTTGGCAGTT
ACAAAGCCTCCACTGGAGTGTTAATGtgagaatctcaaaaaaaataAGTA
CTAAGTAATTAAAACTGAATCAAACCTTCATGGTAAGATTAAACACAACC
TTTTTCGTGCTACAGTCGAATCAGTGTTTCTTCATGGTTTACCaacatca
gcatgaaaatacttTCCAATGGTATATAGACATTCATCAATAAATGGAGC
AAATGTCAATGCTTTGGATAGTGATGACGTTATTTTGATACCTTTTATCA
CATATCTACTCGTACATTACACATTACTTAttagattttcagactttttc
gttagcaatgaaaaatcattttcaataatttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038742XLOC_038742Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061752-exon-scaffold_36-1491911889:1167780..1168161TCONS_00061752-exon-scaffold_36-1491911889:1167780..1168161Clytia hemisphaericaexon
TCONS_00061752-exon-scaffold_36-1510915933:1167780..1168161TCONS_00061752-exon-scaffold_36-1510915933:1167780..1168161Clytia hemisphaericaexon
TCONS_00061752-exon-scaffold_36-1575043694:1167780..1168161TCONS_00061752-exon-scaffold_36-1575043694:1167780..1168161Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1167780..1168161 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.46439	1.13583	0.553107	0.218536	0.527309	0.987321	0.527598	0	0.207767	0.136578	0.272776	0	0.232895	0.124966	0.153948	0.473375	0.653994	0	0.198277	0.580275	0	0.641311	0	0	0	0.600201	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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