TCONS_00061740 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061740
Unique NameTCONS_00061740
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061740 ID=TCONS_00061740|Name=TCONS_00061740|organism=Clytia hemisphaerica|type=transcript|length=360bp
aaaaataaatacagaATAGATTTTAATTTAGTTGATCTGTCAACATTTAG
TGTATGTAAATTTTATATCAATATCTTGTGTTAATGATCTTCGATTGGAC
CTTTTTTATTGCAAGATTTAGTCCAgacttttttcttctattttgttCAC
TGATTTTTTACAGCACTTAGAAAAAGCATTCTAAAACTTAACCTTTTGCT
TCCAAAGCAGTGATAGTTTAAACTATTGTATTAATACTTTTGGGTACTTT
CTACCTTCATGGCTcttgtgttttgatttttgagtttgaaatttacaaag
ttttttatatttttaacttgatttttcttttaaccCTATTTGCCCAGGCT
CAAAGAAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_36:970023..970382

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061740 ID=TCONS_00061740|Name=TCONS_00061740|organism=Clytia hemisphaerica|type=transcript|length=360bp|location=Sequence derived from alignment at scaffold_36:970023..970382 (Clytia hemisphaerica)
ATTTTCTTTGAGCCTGGGCAAATAGggttaaaagaaaaatcaagttaaaa
atataaaaaactttgtaaatttcaaactcaaaaatcaaaacacaagAGCC
ATGAAGGTAGAAAGTACCCAAAAGTATTAATACAATAGTTTAAACTATCA
CTGCTTTGGAAGCAAAAGGTTAAGTTTTAGAATGCTTTTTCTAAGTGCTG
TAAAAAATCAGTGaacaaaatagaagaaaaaagtcTGGACTAAATCTTGC
AATAAAAAAGGTCCAATCGAAGATCATTAACACAAGATATTGATATAAAA
TTTACATACACTAAATGTTGACAGATCAACTAAATTAAAATCTATtctgt
atttattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038730XLOC_038730Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061740-exon-scaffold_36-1491911889:970023..970382TCONS_00061740-exon-scaffold_36-1491911889:970023..970382Clytia hemisphaericaexon
TCONS_00061740-exon-scaffold_36-1510915933:970023..970382TCONS_00061740-exon-scaffold_36-1510915933:970023..970382Clytia hemisphaericaexon
TCONS_00061740-exon-scaffold_36-1575043694:970023..970382TCONS_00061740-exon-scaffold_36-1575043694:970023..970382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:970023..970382 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061740 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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