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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061735 ID=TCONS_00061735|Name=TCONS_00061735|organism=Clytia hemisphaerica|type=transcript|length=1474bp
AAAGGACGTGTGTATCTATTTTCTGGAAGTAGACAGAACTGATCATAATT
TAACATAATTCATATTATAATGACATCTTGGTATAATTTGAATACATAGT
GTTTGCTGTTACATAACAATCTATAATTAGACGGAAGAAAATGTtacttt
cttttatattccaAAGTATTGTAAATGTATTTGAAATCAAAGCTCAACAG
ATCTGAGTTTAAGACATTTGGCTATCATGTGATTTctgtgtaaaatttta
aaattgatggGAAACGTAACGAAGAAGTTTGAAATATGAAGCATGGCCAC
ACATGcacgttttttcataaaaacaaagtaaataagaacataaggcttcg
atggctaaaatgttaagaaaaagttaagaacattttcaaggttttgtggA
CTTaggaaaatgaccaaaaacactCACAAGGTGgtaaaaatacatacaaa
atattACTTGGCTCTGGTTTCATTGAGCACTCTGCAACATCAACCACAAA
CAATACTaaaatacatacatacataaatCATCCACTTGAAAGAAcacttt
taggtttaaaactaaaaaagttaagaacgtatccgaagcctttaaaactt
tcaattgttcttataaaaaaacgtgtaccctaTATAAAAAGAGAATAAAC
TCAGGTCTTTTAGGCCAGATCCATTAGCAGAAGATTCAAATACCTTGCTC
AAGATATNTTTTAGGCCACATCCATTAGCAGAAGATTCAAACACCTTGCT
CAAGatatgaagatttttaaaagagaATTTAATTACTTTCTGTATACATA
CGTACCATGTATTCTATAGAACGGTATTAAGCAATGATTTAAGAACAGAT
CCATAGTGTCAGCAGAAAAATGACAATACTTTGGAAGAATTTTAAAATGT
TCAACATAAAACATTTCACATCTTTCTCAGactttctttattatttttat
acatttttattcTCTAAAAAAATGGATAAACAAGGAGAGCCAGGTTGACA
TTAAATATtaagagtaaaaaaaattcaaataacattttcaaatataaaaa
tatatattcaacAACAATATTATACCTCTATGAAAGTGTAAACCGAATCA
AAAAGACGTTTTACTCAGAATAAAAAGATGTAATTTTACACTATAatatc
tctctctctttttccTCTCATCATATCGCATATATATATTGAGGAATATT
GATACAATGTTTCAAGAGTTTCTTCCAAGAATGAGAAAGGCCGTTGCAAT
TCTTCTTCTATGAATCAATGAATTGTGAACACAATGAAGGAAGAAAatga
aacttgaaaatatcgacTTAGAGTCAGGAAGACAACTTTTCACAAATGAA
AAAAGCTCACATGCAATGCAATTCTTTTAACAAAATATATGCCAAGAAga
caaactattttcaaatcACTAAGAAGCCATTTCCTAtacaatcaaataca
atataaTTCAAATCCCTTCTAAGC Run BLAST on NCBI transcript from alignment at scaffold_36:677512..678985 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061735 ID=TCONS_00061735|Name=TCONS_00061735|organism=Clytia hemisphaerica|type=transcript|length=1474bp|location=Sequence derived from alignment at scaffold_36:677512..678985 (Clytia hemisphaerica)
GCTTAGAAGGGATTTGAAttatattgtatttgattgtaTAGGAAATGGCT
TCTTAGTgatttgaaaatagtttgtcTTCTTGGCATATATTTTGTTAAAA
GAATTGCATTGCATGTGAGCTTTTTTCATTTGTGAAAAGTTGTCTTCCTG
ACTCTAAgtcgatattttcaagtttcatTTTCTTCCTTCATTGTGTTCAC
AATTCATTGATTCATAGAAGAAGAATTGCAACGGCCTTTCTCATTCTTGG
AAGAAACTCTTGAAACATTGTATCAATATTCCTCAATATATATATGCGAT
ATGATGAGAggaaaaagagagagagatatTATAGTGTAAAATTACATCTT
TTTATTCTGAGTAAAACGTCTTTTTGATTCGGTTTACACTTTCATAGAGG
TATAATATTGTTgttgaatatatatttttatatttgaaaatgttatttga
attttttttactcttaATATTTAATGTCAACCTGGCTCTCCTTGTTTATC
CATTTTTTTAGAgaataaaaatgtataaaaataataaagaaagtCTGAGA
AAGATGTGAAATGTTTTATGTTGAACATTTTAAAATTCTTCCAAAGTATT
GTCATTTTTCTGCTGACACTATGGATCTGTTCTTAAATCATTGCTTAATA
CCGTTCTATAGAATACATGGTACGTATGTATACAGAAAGTAATTAAATtc
tcttttaaaaatcttcatatCTTGAGCAAGGTGTTTGAATCTTCTGCTAA
TGGATGTGGCCTAAAANATATCTTGAGCAAGGTATTTGAATCTTCTGCTA
ATGGATCTGGCCTAAAAGACCTGAGTTTATTCTCTTTTTATAtagggtac
acgtttttttataagaacaattgaaagttttaaaggcttcggatacgttc
ttaacttttttagttttaaacctaaaagtgTTCTTTCAAGTGGATGattt
atgtatgtatgtattttAGTATTGTTTGTGGTTGATGTTGCAGAGTGCTC
AATGAAACCAGAGCCAAGTaatattttgtatgtatttttacCACCTTGTG
agtgtttttggtcattttcctAAGTccacaaaaccttgaaaatgttctta
actttttcttaacattttagccatcgaagccttatgttcttatttacttt
gtttttatgaaaaaacgtgCATGTGTGGCCATGCTTCATATTTCAAACTT
CTTCGTTACGTTTCccatcaattttaaaattttacacagAAATCACATGA
TAGCCAAATGTCTTAAACTCAGATCTGTTGAGCTTTGATTTCAAATACAT
TTACAATACTTtggaatataaaagaaagtaACATTTTCTTCCGTCTAATT
ATAGATTGTTATGTAACAGCAAACACTATGTATTCAAATTATACCAAGAT
GTCATTATAATATGAATTATGTTAAATTATGATCAGTTCTGTCTACTTCC
AGAAAATAGATACACACGTCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061735-exon-scaffold_36-1491911889:677512..678985 | TCONS_00061735-exon-scaffold_36-1491911889:677512..678985 | Clytia hemisphaerica | exon |
| TCONS_00061735-exon-scaffold_36-1510915933:677512..678985 | TCONS_00061735-exon-scaffold_36-1510915933:677512..678985 | Clytia hemisphaerica | exon |
| TCONS_00061735-exon-scaffold_36-1575043694:677512..678985 | TCONS_00061735-exon-scaffold_36-1575043694:677512..678985 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:677512..678985 . |
Blast
The following BLAST results are available for this feature:
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