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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061686 ID=TCONS_00061686|Name=TCONS_00061686|organism=Clytia hemisphaerica|type=transcript|length=860bp
CAACaataaatgacaaaagaaaatcaaaacactaTTAACTTTTGAAAGAC
CAGACTCTTTAATTGGTTTAGAGAGAGAAACACAATGCTTACTCAGCATG
GTTAGAGGTTTCATTCCTTAATCTTGACTCATCAAAGGACGATACTGACG
AATTTTGACTTCCAGGGGATTCTGGATCAGCTGGTGAAAATAGCTTTGGC
GAAGCCGAATCTGCAGCGGAATTGGGTGAACTCTGTGGACTATCCTCTAT
GCATTCCATCCCTGATCTAAGCGTCCTATTAGTGGATCTTCGAGATTTGG
ATGGGATGATGTCAGAATCTTCATCATCTATTACTGGAGGTTGTTTTCTA
GGTGATTTCCTTGGAGATTGACGTGTTTTTGTTGACTTGTGAGGCAGAGA
CTCAACATCTGATTCTGAAAGACTCTCAGTCTCATCACCTGAGATTTGTG
GGTTTTTTTCGTTTTCTCCACTGTGTTTTTTGTTACTCTCGATTTCTGAG
TCTACAGTTTCACCATCACTCGATTCGTTTTCTGTGGATGATTCAATAAC
AATCGCACGTTCCCGGAAACTATATTTTGATTGTTGCGGAGGTTTCGTGT
TGGCTGTTGTTCTTTTGTTGTTAAGTCTCCCACTCTGTGTATTCAgttgc
ttttttgttttcatttttcccctttgaatttctattttattaAGTAAATC
ATTTGGAAAGATTTCTTCTTCAGAGAACCTTATtagtaataatgataata
acaaataatatacacgctttttcttttataagaatagtgtactttggttg
agggtgagcattattcttatttttctattgttctaaacaataggcctatt
gttttaaacc Run BLAST on NCBI transcript from alignment at scaffold_36:1195583..1196577- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061686 ID=TCONS_00061686|Name=TCONS_00061686|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at scaffold_36:1195583..1196577- (Clytia hemisphaerica)
CAACAATAAATGACAAAAGAAAATCAAAACACTATTAACTTTTGAAAGAC
CAGACTCTTTAATTGGTTTAGAGAGAGAAACACAATGCTTACTCAGCATG
GTTAGAGGTTTCATTCCTTAATCTTGACTCATCAAAGGACGATACTGACG
AATTTTGACTTCCAGGGGATTCTGGATCAGCTGGTGAAAATAGCTTTGGC
GAAGCCGAATCTGCAGCGGAATTGGGTGAACTCTGTGGACTATCCTCTAT
GCATTCCATCCCTGATCTAAGCGTCCTATTAGTGGATCTTCGAGATTTGG
ATGGGATGATGTCAGAATCTTCATCATCTATTACTGGAGGTTGTTTTCTA
GGTGATTTCCTCAGAGATTGACGTTTTTTTGTGTTTTTTTGAGGCGGAGA
ATCGACTTCTGATTCTGAAGGACTCTCAGTCTCATCACCTGAAGTTTGTG
GGTTGTCGTCATCTATTACTGGAGGTTGTTTTCTAGGTGATTTCCTTGGA
GATTGACGTGTTTTTGTTGACTTGTGAGGCAGAGACTCAACATCTGATTC
TGAAAGACTCTCAGTCTCATCACCTGAGATTTGTGGGTTTTTTTCGTTTT
CTCCACTGTGTTTTTTGTTACTCTCGATTTCTGAGTCTACAGTTTCACCA
TCACTCGATTCGTTTTCTGTGGATGATTCAATAACAATCGCACGTTCCCG
GAAACTATATTTTGATTGTTGCGGAGGTTTCGTGTTGGCTGTTGTTCTTT
TGTTGTTAAGTCTCCCACTCTGTGTATTCAGTTGCTTTTTTGTTTTCATT
TTTCCCCTTTGAATTTCTATTTTATTAAGTAAATCATTTGGAAAGATTTC
TTCTTCAGAGAACCTTATTAGTAATAATGATAATAACAAATAATATACAC
GCTTTTTCTTTTATAAGAATAGTGTACTTTGGTTGAGGGTGAGCATTATT
CTTATTTTTCTATTGTTCTAAACAATAGGCCTATTGTTTTAAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061686-exon-scaffold_36-1575043694:1196239..1196577 | TCONS_00061686-exon-scaffold_36-1575043694:1196239..1196577 | Clytia hemisphaerica | exon |
| TCONS_00061686-exon-scaffold_36-1575043694:1195583..1196103 | TCONS_00061686-exon-scaffold_36-1575043694:1195583..1196103 | Clytia hemisphaerica | exon |
| TCONS_00061686-exon-scaffold_36-1510915933:1196239..1196577 | TCONS_00061686-exon-scaffold_36-1510915933:1196239..1196577 | Clytia hemisphaerica | exon |
| TCONS_00061686-exon-scaffold_36-1510915933:1195583..1196103 | TCONS_00061686-exon-scaffold_36-1510915933:1195583..1196103 | Clytia hemisphaerica | exon |
| TCONS_00061686-exon-scaffold_36-1491911889:1196239..1196577 | TCONS_00061686-exon-scaffold_36-1491911889:1196239..1196577 | Clytia hemisphaerica | exon |
| TCONS_00061686-exon-scaffold_36-1491911889:1195583..1196103 | TCONS_00061686-exon-scaffold_36-1491911889:1195583..1196103 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:1195583..1196577 - |
Blast
The following BLAST results are available for this feature:
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