TCONS_00061619 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061619
Unique NameTCONS_00061619
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3103

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061619 ID=TCONS_00061619|Name=TCONS_00061619|organism=Clytia hemisphaerica|type=transcript|length=3103bp
GTGTTTGAAATACAGAAATACAGTAACAGATATAGTATTTTACAGAGGTT
AGCTTTTTGTTAATTGGCTGTttgtaattttgttttaatGATTACATGGA
GTAAGCGAGACAAAAAAGGGACACATAAAAATTTCGTGAACTAATTAATC
ATCAAAATGCAGGAAGAAAGTACAGAGCTTCTTCATAAGTACAAAGTCCC
TTCGAACATGGAATCGAAAGTTGATGAAGAAGTAATGAGAAATGGTGCAG
ACCATCCTGCAGAAATGAGCGAGGAACAACGGAAGAGATTGGAAAAAATC
AAATCGAGAAATGTTGAGCGTTTGGCGCATGATCAAATGAACAGGTGTCA
CCATGTTTCTTTCAAAATTGGAccgctttcattttatttcaacCCGATCA
CCACAATCGTTTCAGCGGCCATCATTTGGATTTTTGTCATCTTGTGTGTT
GTTTATCCTGATGGTGCAAACGACTTCATGAAAGACGTCAAAACATGGGT
CACCGATAAATGGACATGGCTGTATGTTGTCACTCAAGATGTGTGGGCTG
TTTTTATCATTGCTCTGTATTTTTCGAAATATTCGAACCTCAAATTAGGT
AAAGATGACGAGAAACCAGAGTTTTCAGATGGGACTTACTTCATGATGTT
ATTTTCAGCTGGTATTGCTATTGGATTATTTTATTATGGTGTCGCAGAGC
CTGTCTGGCATTATCGATCTGTGTCTGGTTCAGCACCATTTGGAAATCGA
TACAATGATAGATATTCGGACAATCAAATGGCTCAAGACGCCATCAATTT
GACGTATTTTCATTGGGGGATCCACGGTTGGATTGTGTACGTGATCATCG
GCTTGCTGCTCGGATTCTTGAGTTACCGAAAAGGATTGCCAATGACGATG
AGGACATGCTTCTATCCGATTCTTGGAGACCTCATTTATGGAATCATCGG
TGATTTAATCGACATCCTATGCATCATTTGCACTATGTTTGGTGTCTGCA
CGAGTCTTGGTTTGGGAGTCATGCAATTGAACAATGGAATTCATCGAATC
AACAGCGATATTGCTGAAAGTACCGACAACCAAATTATCATCATTTGGTG
TGTCACAGCTTTGGCTACCATTTCTGTTATCAGTGGTTTGAAAAACGGAA
TTCGAAGATTGTCAGAAGTTTGTTTTGGAATTGgttGTTTCATCATGTTC
TTCATCCTGTACTCCAATGACACTTGGTTCATTCTGAATCTGTTCGTTCA
ATCTATTGGTTATTACTTGCAATGGATCATCCAGTTAGGATTTCACACAG
ATGCTTTTGCACAAGAAGGAAATGCACCTGACGGCAAAGAAGCACCAAAT
TGGATTGATGGGTGGACTATCTTTTACTGGGGTTGGTGGATCAGTTGGTC
ACCGTTTGTTGGAATGTTTATCGCAAAAATCAGTCGTGGAAGAACTATCA
AAGATTTCATCATTTACACTTTGACATTACCTTCCCTGTACTCTTTCCTT
TGGATGGCCATCTTTGGTGGTGTTGGAATTCAAATGCAAAACACAGCTGA
GAAAGCTGGGATGAATTGCTCTTTGTACAAAACAGCAGTTCAGGATCCAT
CAAAGTACAACACTCGATGGGATGAAGTATACGCAATGTATGGTACAACC
ATGTTGGCTTGTCGTGGTACAACTGAAATGTGGTTCGATGTGATGATGTC
ACACAAAGATCTCGGAATGATGATGGCTGTTTTGTCTCTCATTGCTATCA
TCTTATATTTCGTGACAAGTTCTGATTCTGGCTCTCTTGTCATTGACTGC
TTGTCTGCTAATGGAAACCCCGAACCACCTGTAATGCAAAGAATCTTTTG
GGCTTTGACTGAGGGAGCTACAGCAACCGCTTTATTGAAAGCTGGAGGCT
CAGAAGCACTTTCTGCCTTACAGACAGTTTCTGTTGCGTGTGGTCTGCCG
TTTACATTTTGTTTGAATTGGACATGTGTTGCAATGTGGAGAGCTGTTCG
TGAGGAATATGGTGAAATTGACGAACAAGAAGGGAGATGGTATCGAAGTA
TGTGGTCAATCGCCGACTTCAGAATCCTCGCTCAGATTCCTCTCGATATC
GTTGCACCCTGGTATCGACTGGCCAAGTTAAGATTGAAGCTTGACAAACA
AGAGTCGAATGGTGGTATGTTCATTTTGTACGCAATCCAGTTTGGATTAC
CATTCTATTTGTGGattattttgatgattgtgGAAGTTGGTGTAGAGCAA
ATCTCATATGTTGCTTGGGCCTGTTTGATGGCTTTTTTCGCTTTCTCAAG
TGGTGTACGTGGTGAAATCAGAGAGCAATTTGATATTGAAGGAAACATGA
TTGAAGATCTTTTCACAATGGTGTTGGTGTATCCTTTGGCTTTGTCTCAA
CAAAATGATCAGATGATGTATGGTGAAAAATACAAAGAGCAACAACACAA
CGGGCTTGAGATGGGTGTAAACGGTACTTATATTCCCAACGCTTCAAACG
CCCACTACCCACCACCACCCATCTACCCTTCGAATGGTGGTTATGTCATT
AGTGCACCACCCAATGGAAaccaaaaaatgtaaataacaaaaattaaaaa
caataaaatggtATAAACTTTGGTCTATCTACCATACTTGTATAATACTT
CTTTTAAAGGGTGTCAGATAGGGATAGGTCAATTCTCTATCCGCTGTTAC
TCTAAATGTTGGTATTTAATAGCAGTGCACCATCTATTTTATATACGACA
TTGTAGTACACTTTTCTCATGAGtagaatttgtaaaatattttagagTAA
AATTTAATGTTAATGAAGCGTATTTTACTTTTGTACATAGATATGCACtt
tgaaaatcgggaaaatcagAAGGTATACGCTGGCGGATGTAAGACAATAA
CTGTGCGCCTTAaacgaaaaaatcttttttgaagccttcgaatgttctca
AATTCTTGAGTTTTAGGCTTTACATGTGTTCTtaaaaaatgttgttattt
tcacGATCATACGAGTATTCttgtgcaatttcttaagaaatttagacttt
ttttttaGAGTCAATAAAGCcggaaaatgttcttaacttgttattGAATA
TTA
Run BLAST on NCBI

transcript from alignment at scaffold_36:1078913..1098001+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061619 ID=TCONS_00061619|Name=TCONS_00061619|organism=Clytia hemisphaerica|type=transcript|length=19089bp|location=Sequence derived from alignment at scaffold_36:1078913..1098001+ (Clytia hemisphaerica)
GTGTTTGAAATACAGAAATACAGTAACAGATATAGTATTTTACAGAGGTT
AGCTTTTTGTTAATTGGCTGTttgtaattttgttttaatGATTACATGGA
GTAAGCGAGACAAAAAAGGGACACATAAAAATTTCGTGAACTAATTAATC
ATCAAAATGCAGGAAGAAAGTACAGAGCTTCTTCATAAGTACAAGTGAGT
ATCAAAACGTTTTCCGAatctgatttcaaattttctttgaagtGCTGATA
TTACGAGGTGTGGTAACAAACTCTCATGGGATAGGGGGTATCAGGAGACT
TTGTGTGTCCGACCAACAAGCCTTGCTTTTGGCCTACGTCCTCACCACCA
GATGTGTTACTTTCAATATatagcgtttgtgtgaaaaccacgccgGTCAC
GCGTTTAGGATGGTAAATAAGTGCCTTCATATTTCCAATCCAGGCGTTAC
GTGTCTGCACCTTTcaggcttggaagtcaatggggGTTAgaaaacaccga
aacaccgtcctttttttcttaaaacaccGAACCACCAACGGAAAAAATAT
ACCATCACACCGTCAAACCTGTGCACCACCTCTAAGGGTTTCTGTTTAAA
GGGACGTAAAAGTATTAAAATGTAAACGAACCAagtgtccaaaacaaaca
aaacaattaaaatcacgtgtctaaaacaaataaaacaattgaaacgGTCA
Aagtcagccatatttgttttgattttgtattccgctgcatacggttaaaa
aaaagtctgtccagatataattggcagtggaaacaagaatgcttgtaact
tagtaataagttggagatttgatattttcacagaaaagtgctatcaaggg
gtatttcgggtcctaTATCTTCCGAAAcacttttttgtttgccttgaaat
ttaacaaacttcttaacctaaggttgaactaccactggtgtaaaaatgaa
cgttatagcataagtagaaaaaaagctcaatNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNttttcaaccaaaaatacattcaaatatagcgcttttgattctctaa
aacaagaaaaaaaaatttccataattatatttgactatcaaaagttacag
gcattcttgtttccactgccaattatatctggacagactttaatttacaa
atttctTCATTACCTTATTATGTTCCTTTAAGTTTAAGGTGTGCAGGGCA
ATATTGCGTCAAACTTTCATTTCCTCAATACCGTGATGGTCCAACAAAAA
TGCAACGTAAATGAAATCGGCAACAGCGCAAAAAATATTCATAGAAAGAA
TGCTAAaatttatcgaccgccggaggcgctttctttcatagtggtaccct
tatctcgttttgccttggctcattactttgtctaccatttactttcggtc
tttttaactagattacccaggtgtttctcttttttttccctggatggctt
ttattcggaattgaataatcgagacatgaaaaatgaccatattgtaatct
gttttcaaacATATGCTGAAAATCAGAAATGTGGAACATTTTGAGAAAGT
TGTGTTTCAGAAAAAGTCAGCTACCGTATTTTGAAATTGTTAAGAAAATA
AcgtcaaaagttttttaaaagattttttcagcttTGTGTTTGCGCTTAAA
TTAGAGTAAACGTGTTTACTCATGTTAATTACAAGTCAACCTATTCCGCA
TTCTCAGGCTCCCGGGGCACTATTCCGGTATCAGACTTTTGGCTATACAC
TCAAACCACAGTAGAGAAATCCCCGTCACAGATAAATTTCATTCACATTC
GAGTTCTGCCTTTCAACACATGAACATCTTAACTTTGAAAAAGATAAATT
AATACTCTAATATCATACAAATATGGCTTCTTCTGCACCATCAACGTCTG
GTACTGGGTTGCCAATCTACACTCCAGCCTCCTCGAACATTGCAGCTTCG
TCTCAAGCAACAGACTCACAACAAACAGTCCCGATAACAAGTCCGTCGTC
CTCGAATCCTTTACCACGGGCCGTTCCAACAACAGCGTCAACTCCTTCAG
TTAACATAACAACTCTCTTAAATAGTATTGTAGATCGCAGGATCAGCAAT
TTGTTTGGTAACGACAGAGGAAGGACTAGCACAACGTCAACAAGTCAAAT
ATACCAACACCCACATCCATCTATATCACTCACTCAACCCCCGTCTACTA
TCACGGGTAACGTCGTCACCACAGCAACCTCACCAGCTGTCGTTTTCCCT
GACGGAATTCcagaatttcaaaatggtaaccCTCAATGTGGGAATCCTTT
CCTACAGCCGAATCCAAACAACAGTCAAGCAAACGTCCTTCCTCCAGTTA
CAGCCAGAGTTATCACATAAATCCGCAATGGTGAGTtcgtgaattttgaa
aatttactccCTGCTAACATTGGCAGGCCTGCAGCCTCGACAGTTtcctt
taattttgatgaagagaGATTCTCTCTCACCAACAGCGAGGCCCACTGTT
TAGACACTCCTAAAATGAAGAAACAGAAAGTAGTAGACTTTGCATCATGG
ACCATGGCATGGTCCAACTTTTTCCAAACATTGATCCAGTTTAAGCCTTA
CCTGGCCCAAGAACTTATCGCCTACCAAACTTacataacccagctggcac
gaCAGTATAATTTTCGAGCCTGGTATGCTTACGACCAGGCCTTTAGGATG
TTTTTAGCTAACAACCCCCAGACTAACTGGGGTGTTACCAATGACTATTT
ATTCAATTTACATGTTAGAGGTCATGCTACTCCAACAAGGTGTTACATCT
GTCAGAGTCTGGATCATTTAGCTCCCAGGTGCCCCTCCACCTCTTCTGCC
CCAGGTTCCTCATTTTCAGGTTTCGCAGGCTACCACCGCTCCCGCACCCC
CTTTTCAGCAACACAGAGCACCCCCAGTGTTCCCCACCCCTCTACATCCC
GTGCTGCTACATCTTCTTCAGCGCCCACTTTCAGACCCTATCCTAGGCCG
CCCTTTCCATCCCCCCAGCAGACAGCCAGTGCAGGGCAATCTGGCCAGAT
CTGCATTGCCTTCAACTGTGGGAATTGTGCCAGAGTCCAGTGCCCAAGAA
TACACAAGTGCATTGTTTGTTCTTCCTTCAACCACCCAGCCACTGACTGC
CCCCACCGCCAAGGGTAGCGACAGTGTCCACTTGAGAGAGTTACGTTCTT
TGAGTTTTCCCTTGCCTTCCTCCCCACACACCACTGTTGATCCCcacatt
ttgagttttttcctTGACGGTTACCGTCAGGACATTGTTGAGTTTCTTAT
TCATGGGTTCACGTATGGCTTTGAGTTAGGTTTTGATGGTCCAGCCCCTG
TTTGCACAAGACGTAACAACCTATCTGCTATCCATCACAGCGACGCAGTC
TCTGCATCCATCCTGAAAGAGCTTCAGCGAGGTCACACAGCAGGTCCCTT
CCCCAATCCCCCACTCCCTGACTTTCATTGTTCGCCACTTGGCTCCGCAC
CCAAGAAGGATGGTTCCCGAAGAATTATTCTAGATCTGTCTTCACCACGA
GACCACTCTGTCAACGATGGCATCCCGGAGGATCTGTGTCATGTCAAGTA
TTCATCATTCGACGATGCGGTAAGTATGGTGGTTTCTCTTGGAGTGGGTT
GCTACATGGGCAAGATTGACATTCGGCACGCCTTCAGGCTGTGCCCAGTT
CGACCAGAAGATTGGCACTTGTTGGGCTATTGTTGGCAAGATCGCTTTTT
CGTTGACGTTTGTCTCCCCTTTGGCAGTCGGTCATCTCCTTGTATCTTCA
ACAGCTTCGCAGACGCTCTTCAATGGATTCTCGTCTCTAAGTTTGACCTA
TCCGGTTTGGTGCATTATTTGGACGATTTCTTTCTCTGCTCTATCAACTT
TGAAACGACTCGATACTACATGGATTTGGTACAGGCTGTTTTTGACATCA
TCGGAGTACCAGTGGCAGTTGACAAGCTTGAGGGTCCCAGTCAGGTTATC
ACATTCTTGGGCATTGAAATTGATTCTAGCTCCTTTACCATTCGTCTTCC
TCTTGATAAGCTTCTTGAACTTCGTCAACTTGTGGACTTTTGGTTGGACC
GCCGGAAATGCACCAAACGAGAACTTTTGTCCCTCATTGGATCTCTTTCT
TTTGCTTGTAAGGTCATCCGCCCTGGTAGAATGTTCCTGCGTCGACTCAT
CGATCTTTCCACCTCTGTATCCAAGCTTTCACATCACATTGACATTTCTA
CTAGTGTTCGTCTAGATCTGGCCATGTGGGCTGAGTTTTTGTCGTCTTGG
AATGGTGTCTCTTTTCTCCCTGAACCAGCAGTCACTTCAGATTCTATTGC
GCTTTTTACTGATGCATCTTTTCTTGGTCTAGGTGGCTTCTTTCAGGGAC
AGTGGTTGTCCCACCCATGGCCATACGACATGTCTGACCTAACTCACATC
GCAGTTCTTGagctttttgctgtttttgccaCCATTTCCGCATTCGCCAT
CCCTCTGACCAACAAGCAGATCACAATGTTCACAGATAATGAGCCTATCG
TTGCAATCTGGTCGTCCGGCACTTCCAAGGACAAACAGCTTATGGCATTG
GTTAGAGAACTGTTTTTTCTTACTGCTCGTCACAACATCTCTGTTCGTTT
TGTTCATGTCCCTGGTCGTCGTAACACTTTTGCTGACTTATTGTCTCGTC
TTCAGGTCGAAGCTTTCAAGTCGATATGTCCCGATTGTTCACCGAATCCC
ACCATCATCTCACCTTGTGTCATGGCCGTCTTGGACAAGATCTTGCTTCC
TTCTTGAGAGACTCACTAGCATCTTCCACCCAAAGCACTTACATGTCAGG
CGTACGATCTTATGTCAACTTTTGCCAATCTTCAAGACTGAACCACTTTC
CCGCCAGCCAATCTTCACTTTGCTTCTTTGCTGTTTTCTCTGCAAACAGA
GGTATCTCTCACAAAACCATCAAGGTCTACATACACGGCATCCTCCATCA
AAATTCTATGCTTGGCTATCAGTTGAATCTTCACGACATGACCATTCTAC
AACGTTTGATCAGAGGCATGAAACGACGACAAGGCAACACACTTACCAGA
GCCGTTAGGAAACCTATCACCATCAATTATCTCCAAcagatatcaatttt
tttgcacACCTCTTGTTTCACGACAGCTGATAAATACATGCTCTTGACAT
CTTGTGTAGTGGCGTTCTTTGGGTTACTGAGAGTCTCTGAATACACATGC
CCCAGTTGTTCCAGATTCAACAGCAGCATACACCTGTCACGTTCTGACGT
TCAGTTTAATCCCAGCTTCTCCATTATGACAATACGTATCAAAGCAAGCA
AAACTGACCCCTTCCGAATGGGAACAACCATACGTATTGCAGCCACCTTT
GATGCCCTTTGCCCGGTTGGTGCCATGCGAAACTACCTTGCCCTCTCCCC
GAGCTATTCTGGACCCCTTTTTCAGTTCTCCAACGGTAATTTTTTAACCA
GAAATGCAATTCGCAAGCTTTTGATTACAGCCCTCCCTACTATTAGGGAC
ATCAATACACACAGTTTTCGTATAGGTGGAGCTTCAGCCGCCTTAGCATC
AGGTGCCTCAGACTCAATGATCCGTATTTTGGGCAGATGGACAAGTGATT
GTTATTTAAGATATTTGAGAATAGCTGACAACGACATTACTCAATTTCAG
CAGAAAATGGCTAAGATTGTCTCCACTACTACAGTTTGGGATCCTGACAC
TTGGTAGTTTTTCAGtgcatttttttctattttaatagTATGGCAGATAC
CTACTTGCGTTTTTTCACTAGCTTGTGTTTTCTCTTAGGCCCTAAGTTTT
AGGAAGCGCTGAGTTTGTGTGGCATGAGTAGTTTTGGCGACGATTTGGGG
GTGTGGGTTACCCTGTAACCCCTTTCTCAGATCCGCTACCCATCCTCCTT
ATGGGATAAGATCACTCCTTAGGGGATAAGATACGCTCACCGTCCTCCAT
ACGGTACACCGTCCTCCATACGGTTTAGGCTAAGTTTGTTATCTCTTGAT
GCATCCCCAATGACTCGCCAAAACTCACAAATTTCTATTTTCGTTCATTT
AATTTTGCAAGAATTTTCACTATTTCGACCAAACACATTTTGTCTCTATT
CCTGTTTCCCACAGTTCTTTTATCACTCGTACTCTAGTTTTACAGGACAC
TATTTCGACCACATttacataaaatattttgagtCATGTTTCCTTCAGGG
CATTTCGACCACATCATATAAAACATTTTTGAGTCATACTGTATTTGCCT
TCAGGACTACCTCTATTTACATTTTACCTTGACGTAGGAATTAACTTGCA
GCTCTTTTGATGGAAATGCATTAATGTTATCCCATTTCAATCATCGCTAC
AAAATAAAATTGGTTGAACGAACACGCTCCATCGCAGCGATGCGAATGAA
TCAAAAAGAGATTATGACATTGTTAAATTGTTCTTTAAATGAAATTATTT
ATGCGCGTGCGCAAGTAAAAGTACATCGCTAATAAAAAAAGGCGAAGTCA
AAAAGATAGGCCTGATTGAAAACATGAGCATTAAATGAAAGTAATTAAAT
GGtcgttcaactttttttcttttgaaaataacaatttttctaaagaaata
tTGACATATTCGATGGAGTTTACAAGCATTTCTTCATTGAAAGATTGAAC
AGTTTCTGCGCCATCCTTCATCTTGTAACATACTGTATGCAGATTTTTTG
ACagaatttttctcatctttttaCAGAGTCCCTTCGAACATGGAATCGAA
AGTTGATGAAGAAGTAATGAGAAATGGTGCAGACCATCCTGCAGAAATGA
GCGAGGAACAACGGAAGAGATTGGAAAAAATCAAATCGAGAAATGTTGAG
CGTTTGGCGCATGATCAAATGAACAGGTGAATTCTCTTCAAGTTTGGAGT
CTTTTTCTGTTGGTTTTCTTTTAGGagaacaaaaatgaaattttcaaaaa
tgaaaaattccaaaatcatGATTCCAAACATCCCATGTTGGTATATGACA
CGGGAAAGGGTTAACATTTATTTTATGAGGAAAAGGGGTAAATTCGTTTT
GATATTAAAATTGATTCTTTCTTCAGATTAATTTTCACGAGAACTAATTT
TGTGTTTTCCCGATAATAAAACTCGAAAAATCGCATGAGATTGCTGCAAT
ACCGTGCATAAtatataataattttcaaaaattaagttAATTTTATCAGT
TATCCCCCTCCCCCCCTTACTACAATGCTGGTTGTGTATTCCAGCCGAAA
AGTTGCAGTTGGCTGACCGACCCATCAGCATTGTAGTAAGGGGGTTTCAT
GGTttgcggaggagcggaatcggccggAGGAATTTTCGGACGGAGCGGCG
GAATTtgacgaaaatttagacggaatttcgaaaattgggtTCTCCGACGg
tgacggaaaattagacaattttagtgcNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GAAAGGGTTAACATTTATTTTATGAGGAAAAGGGGTAAATTCGTTTTGAT
ATTAAAATTGATTCTTTCTTCAGATTAATTTTCACGAGAACTAATTTTGT
GTTTTCCCGATAATAAAACTCGAAAAATCGCATGAGATTGCTGCAATACC
GTGCATAAtatataataattttcaaaaattaagttAATTTTATCAGTTAT
CCCCCTCCCCCCCTTACTACAATGCTGGTTGTGTATTCCAGCCGAAAAGT
TGCAGTTGGCTGACCGACCCATCAGCATTGTAGTAAGGGGGTTTCATGGT
ttgcggaggagcggaatcggccggAGGAATTTTCGGACGGAGCGGCGGAA
TTtgacgaaaatttagacggaatttcgaaaattgggtTCTCCGACGgtga
cggaaaattagacaattttagtgcagaaaaacagaattttgcaaattttc
gcgaaatttcggaattggcaaaaaatattcaaaattcgcggaatttttga
caaaaatcttgaatttcaaaggaattttcggtgacggaatttcgGTTGAT
TCTTaaacggtttgacggaaatttgagaaaaaattggcggaatagCGGAA
TTTCCCCCTCCCTTAGTGAGGGGAAAGGGGGAATTATTTTTCAGTAGTAA
TGAATCAAAAATTATGCACGGTATCGTGAATTGCtaaattaaagattttg
tttttaaataagagttataacgtttgcttactcattaaTTTAAAttaaca
agctttttcacattggatcgatacggatgtggagcaagattggtcagaaa
taggaaaagaaaaacattataatataacaataggaagatactgtctgata
tgaaacaggaacacttatgtaaaaacaaagcCTTTAAATCTACACACGAA
AATTACAAGATCAGATTTTCGGCTGAAAACAACAAGTGAAATTGCTTTTT
CTGGCTTTTCAAGGGCCGCACCTAATGTCACACATAAAGCCATACttgct
atcagaatcataaaaaagcgaATTAAGGAACTGAGTTTGAGTTTGGGTCG
CGCTGTCAACTGAAATTTGTAGATTCGCAAAATTAAACCTATTATTacgg
aaaatattttaaagtatCTATATAAAAGTGATATCTCGGGTGGGGTTTGG
GATTACAGTTAAATTCTTTTACTTGGATTAATTTTTTAGCcggtttctta
atttttaggattttgagcgttcaaatcaaataaaagttacGATAACAATA
GCTATCGAACGAtagatatttttaaattatgCATACTGAATAAATACGCA
AACATAGCTATGAGAGGTATtgcgattttttgaaattgtcttcATTGAtg
ggatgaaaaaaatcataaaatttaacAGAAATTCCAGCTGTGCATTCAGG
GAGGGGGCGagttattttaaaactttgcaTCTAAAGTTAGATCATGATTA
ATTTTGCTCTTTTATGGTCTAGTTATCTGAAAGTTAATAATCGACACAaa
atagcgcaccgcgctgaatctaaaaatagattttatttttgacataatca
ttaccaTCGAtttcattactctcgatgtgtttgtacgagttccaatccNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGCTGAGT
TAAGTACAAACTTCAACCAGCTTGATATCAATCTTATTAACAGTAGGATT
ATATGTGTAAACCGTATACAGTaatatttgaaatatatatGTAACAGTTA
TCATGTTGAACCTTCTCATCGTGAATAATACAAACatcatcaaaaataca
aaatgatcgctcttttattgaaaaattgacttaaatattttctttcttta
cagCTTGATCCCAATCTATTAGTATCGGTCTTTCAGTCTTTTGATTATGT
TTTTCTTTGACAGCGCAAAAGAATTTCATCTAAACAATGTccgttaaggc
cggtctccacttgcgcgcgctgcgatcgcaccttttggcttcaatccttt
ttgctcggaaaaaagattacgtcataaaaatgtagcgcgcgctcgaaaaa
aagttgaacacatttcaacttttttcaaccgttacgtcataTTGCGCCAA
TGAAattgctttatttttcttttgatcaagcATGGTAGCAATTCTTTTTT
GAGGCGCACATTTAAAAACTACTATAGTAACTAGGTTGTTAAATAGATGA
GACAAAGTTTCTCTTGTAAAGGAAACAAATTTTCCGCGGGCTCCTTTCAC
AAATATTTACAAGTCTCAGAAGAACATTCAGAAATTAGAATTATGTGCAA
TGATACAATCTGCTTAGCGAACAATATGTGTCCCCCATCTTCGATTCTTT
ATATGGTAAACTGTTTAAGACATGCGTGATAAAATTCTTAGGCTGCACTG
AAGTTTTTTTGTTGCAAGTTGCAAGCAGTATTGCAGGCGCCTGACAATCG
TCTCAGTATAGGCAGCAAAAGGAAGTTTGCAATTACTCGAAAAACTATCG
TTGACAAACCATGCAAGGAAAAGTTAACCGCGCTTTCAAATAAATAACAG
AAAGATTTGACGTGCTACTTTCTGCAATTTCTCAAACGGCCACCTGCAAA
TAATTTCAACAGTGCAGCCTCTGCTtaataatagcgagtttatgtatttg
cacttttgaggacggtagagtgactaaggcgatttggaataacccacagt
tctgacccgcaaaatcgaggacggtaaaagtgctgatttaccgtcgtcct
cagctggttaGGATCTAGCCAAATTaaaaccttaccgtctccgtcgctga
aaaacacacatacataaactcggtagtaTGTCGCCACAGGTAAGATTTCA
TTGAAATCGAAACTGTGGTCACGTTGCTCATTAGCCAACTTGGTTTTTGT
ATTATTTCAGGTGTCACCATGTTTCTTTCAAAATTGGAccgctttcattt
tatttcaacCCGATCACCACAATCGTTTCAGCGGCCATCATTTGGATTTT
TGTCATCTTGTGTGTTGTTTATCCTGATGGTGCAAACGACTTCATGAAAG
ACGTCAAAACATGGGTCACCGATAAATGGACATGGCTGTATGTTGTCACT
CAAGATGTGTGGGCTGTTTTTATCATTGCTCTGTATTTTTCGAAATATTC
GAACCTCAAATTAGGTATGTATATATTGATTATTTTGTTCGCTGTCATCT
ATGCGAACACTCGTAGTAGAAGGCTCAAAATACCAGTATTACTTCAAAGG
GCCATAACTTTTGTTACAGaaactttcactttcttttttattgcgTTTTG
GATTGTGCGTGCGGTTTTACGTCGATTGGTGTATAATGAAATTTCAAGAG
GTCAAGTTTCGATTTCTGAAATAGGCTCGGCAGTGAACGTGTTTTTAAGT
TAATAATTCGATATGAAGACTCATATAAACACACAACACTTCATTTCTTT
AGGTAAAGATGACGAGAAACCAGAGTTTTCAGATGGGACTTACTTCATGA
TGTTATTTTCAGCTGGTATTGCTATTGGATTATTTTATTATGGTGTCGCA
GAGCCTGTCTGGCATTATCGATCTGTGTCTGGTTCAGCACCATTTGGAAA
TCGATACAATGATAGGTATAATCCACACTGAAAGTGTTTAGTTTCAAATG
TTCACTTTTTCCTATTTGTTAACGCCTTACCATTTACATTGCATCGAAAG
TGTAAACCGGTTTTAATTCACGCTTTTTGTCTGTGAACGCCTTACCACAT
GCATTGCATCGAAAGTTAAAAACAAATCAACATTATATTTTATGGAAGCC
TTACCACAACTtcagaaaaattaatttgtGTCAGTTATCTTACCACATCC
ATTGCTTAAGGCCAACCATATTTCTGATTCGATTTTCTAGATATTCGGAC
AATCAAATGGCTCAAGACGCCATCAATTTGACGTATTTTCATTGGGGGAT
CCACGGTTGGATTGTGTACGTGATCATCGGCTTGCTGCTCGGATTCTTGA
GTTACCGAAAAGGATTGCCAATGACGATGAGGACATGCTTCTATCCGATT
CTTGGAGACCTCATTTATGGAATCATCGGTGATTTAATCGACATCCTATG
CATCATTTGCACTATGTTTGGTGTCTGCACGAGTCTTGGTTTGGGAGTCA
TGCAATTGAACAATGGAATTCATCGAATCAACAGCGATATTGCTGAAAGT
ACCGACAACCAAATTATCATCATTTGGTGTGTCACAGCTTTGGCTACCAT
TTCTGTTATCAGTGGTTTGAAAAACGGAATTCGAAGATTGTCAGAAGTTT
GTTTTGGAATTGGTAAGGTACTACGTTTTAGTTCTTTGACAAAACCATAG
Atatataaagcccgaagggctagatgtaaagcttttgctgaaaggtgtgc
cgtggttaggtaggaaatctaACCTAAGTCACGttacattacaatagaat
ttcaacgattgaccaatcagaagcttcgcggattttcgaaaacaatagca
acaatattctTTCCAATACTCACTTTTTTTGTCTGCATCTAGTCCTTTCG
GCTTTTTAAATCTACGAACAAAACGTGTTGTCTtcatcttaaaattttaa
catttcacTTGCGGGCCTATTTAACtgtgaaattttaaagaaaaaaacat
agcaatctcgtacccagaacCAATTCCACCACTTTTTAGATTCACTGATA
GACGTAACACAACCTTTCATGAGTGCTGTCATAATCATAGATAAACCGAA
CTAAGgaactgggttcgagtttgacagcaaacaattttcaatttcaggtt
GTTTCATCATGTTCTTCATCCTGTACTCCAATGACACTTGGTTCATTCTG
AATCTGTTCGTTCAATCTATTGGTTATTACTTGCAATGGATCATCCAGTT
AGGATTTCACACAGATGCTTTTGCACAAGAAGGAAATGCACCTGACGGCA
AAGAAGCACCAAATTGGATTGATGGGTGGACTATCTTTTACTGTAAGTTA
ATTTCTACGTCAGAAAGTCAGGCAAATAAATGACGTATTAGGATGTATTA
GGTTCCAAAATATTTATCTTTGTCGAAATGAGTAAAGAATAGTAGACTTG
AAATGTTATGAAATTTGCTGAATTCTGTGTAATAAATTATTGTTTGTTTT
GGCTGCGATGTTGGGGATATACCATGTAAAGTAAGGTCTAGCTTAAGCGC
CTAAGACCGTCAGGATGACGGCCTGTCGAAGGACTGTGATGACAGTCATA
CGAGCGTGGACAGCCTCTACTCCTAACCTTGTACCGCCCGGGACAGTAGC
CTGACCTTAGCACTGTCCTCGGAGAACAAGGGTTTACTTTATTGTTCGCA
ATATATATATAACACATCATTTTTAGGAGAAACTTGTTTGTGTTTTACAA
GccattttattcttcttttctACTCATAATATATTCGTTGTGAATTTCAG
GGGGTTGGTGGATCAGTTGGTCACCGTTTGTTGGAATGTTTATCGCAAAA
ATCAGTCGTGGAAGAACTATCAAAGATTTCATCATTTACACTTTGACATT
ACCTTCCCTGTACTCTTTCCTTTGGATGGCCATCTTTGGTGGTGTTGGAA
TTCAAATGCAAAACACAGCTGAGAAAGCTGGGATGAATTGCTCTTTGTAC
AAAACAGCAGTTCAGGATCCATCAAAGTAAGATTCCAAATGTTGAGTTAC
TTCACTGACCTCTATAAACACTTGactaagctatatccgccatccttggc
aagaaatttttttcgaaagtggTACCCGCCAAAGACGGCAGTGTTAGAAA
TGCATTTACTCCGGTATTGAGTAGTGCTCCCATCAGTGTACCACTATAAG
GGTTCAACCCTTTATAAACGCAGCCGATCGTTCACTCGTTTTTTCAAAGT
CAAAGCTTGATAAAAAGCTTAAATCTTGAAAGTTAGGCATTTATTTTGGT
TTCGTTTGGAAGCAATATTGAACCTTTTTTTTAGCTTCGGTTTAAATTAA
ACTCATAAATCCAGTAATCAGTGGCTAAAACGTAAAGTTCAGAACTTGTA
CAGTAtttactagacggttcccgtcgtcgcaaacgccggttaacggtttt
gcttgcacatcaaaagcctttaaaatactataatgtgggttaatgcCTGA
CATCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNttttccagccgcggcgttcaaattttagaaacctta
acatatgttactgggctagcgttacagacatttttcataaactcatttag
tatagtaagattcaaagtcaaaattctttgttaatcTTAGGTACAACACT
CGATGGGATGAAGTATACGCAATGTATGGTACAACCATGTTGGCTTGTCG
TGGTACAACTGAAATGTGGTTCGATGTGATGATGTCACACAAAGATCTCG
GAATGATGATGGCTGTTTTGTCTCTCATTGCTATCATCTTATATTTCGTG
ACAAGTTCTGATTCTGGCTCTCTTGTCATTGACTGCTTGTCTGCTAATGG
AAACCCCGAACCACCTGTAATGCAAAGAATCTTTTGGGCTTTGACTGAGG
GAGCTACAGCAACCGCTTTATTGAAAGCTGGAGGCTCAGAAGCACTTTCT
GCCTTACAGACAGTTTCTGTTGCGTGTGGTCTGCCGTTTACATTTTGTTT
GAATTGGACATGTGTTGCAATGTGGAGAGCTGTTCGTGAGGAATATGGTG
AAATTGACGAACAAGAAGGGAGATGGTATCGAAGTATGTGGTCAATCGCC
GACTTCAGAATCCTCGCTCAGATTCCTCTCGATATCGTTGCACCCTGGTA
TCGACTGGCCAAGTTAAGATTGAAGCTTGACAAACAAGAGTCGAATGGTG
GTATGTTCATTTTGTACGCAATCCAGTTTGGATTACCATTCTATTTGTGG
attattttgatgattgtgGAAGTTGGTGTAGAGCAAATCTCATATGTTGC
TTGGGCCTGTTTGATGGCTTTTTTCGCTTTCTCAAGTGGTGTACGTGGTG
AAATCAGAGAGCAATTTGATATTGAAGGAAACATGATTGAAGATCTTTTC
ACAATGGTGTTGGTGTATCCTTTGGCTTTGTCTCAACAAAATGATCAGAT
GATGTATGGTGAAAAATACAAAGAGCAACAACACAACGGGCTTGAGATGG
GTGTAAACGGTACTTATATTCCCAACGCTTCAAACGCCCACTACCCACCA
CCACCCATCTACCCTTCGAATGGTGGTTATGTCATTAGTGCACCACCCAA
TGGAAaccaaaaaatgtaaataacaaaaattaaaaacaataaaatggtAT
AAACTTTGGTCTATCTACCATACTTGTATAATACTTCTTTTAAAGGGTGT
CAGATAGGGATAGGTCAATTCTCTATCCGCTGTTACTCTAAATGTTGGTA
TTTAATAGCAGTGCACCATCTATTTTATATACGACATTGTAGTACACTTT
TCTCATGAGtagaatttgtaaaatattttagagTAAAATTTAATGTTAAT
GAAGCGTATTTTACTTTTGTACATAGATATGCACtttgaaaatcgggaaa
atcagAAGGTATACGCTGGCGGATGTAAGACAATAACTGTGCGCCTTAaa
cgaaaaaatcttttttgaagccttcgaatgttctcaAATTCTTGAGTTTT
AGGCTTTACATGTGTTCTtaaaaaatgttgttattttcacGATCATACGA
GTATTCttgtgcaatttcttaagaaatttagactttttttttaGAGTCAA
TAAAGCcggaaaatgttcttaacttgttattGAATATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038649XLOC_038649Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061619-exon-scaffold_36-1491911889:1078913..1079106TCONS_00061619-exon-scaffold_36-1491911889:1078913..1079106Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1078913..1079106TCONS_00061619-exon-scaffold_36-1510915933:1078913..1079106Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1078913..1079106TCONS_00061619-exon-scaffold_36-1575043694:1078913..1079106Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1085839..1085988TCONS_00061619-exon-scaffold_36-1491911889:1085839..1085988Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1085839..1085988TCONS_00061619-exon-scaffold_36-1510915933:1085839..1085988Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1085839..1085988TCONS_00061619-exon-scaffold_36-1575043694:1085839..1085988Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1093073..1093326TCONS_00061619-exon-scaffold_36-1491911889:1093073..1093326Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1093073..1093326TCONS_00061619-exon-scaffold_36-1510915933:1093073..1093326Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1093073..1093326TCONS_00061619-exon-scaffold_36-1575043694:1093073..1093326Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1093615..1093777TCONS_00061619-exon-scaffold_36-1491911889:1093615..1093777Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1093615..1093777TCONS_00061619-exon-scaffold_36-1510915933:1093615..1093777Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1093615..1093777TCONS_00061619-exon-scaffold_36-1575043694:1093615..1093777Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1094053..1094474TCONS_00061619-exon-scaffold_36-1491911889:1094053..1094474Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1094053..1094474TCONS_00061619-exon-scaffold_36-1510915933:1094053..1094474Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1094053..1094474TCONS_00061619-exon-scaffold_36-1575043694:1094053..1094474Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1094960..1095154TCONS_00061619-exon-scaffold_36-1491911889:1094960..1095154Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1094960..1095154TCONS_00061619-exon-scaffold_36-1510915933:1094960..1095154Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1094960..1095154TCONS_00061619-exon-scaffold_36-1575043694:1094960..1095154Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1095613..1095838TCONS_00061619-exon-scaffold_36-1491911889:1095613..1095838Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1095613..1095838TCONS_00061619-exon-scaffold_36-1510915933:1095613..1095838Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1095613..1095838TCONS_00061619-exon-scaffold_36-1575043694:1095613..1095838Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1491911889:1096503..1098001TCONS_00061619-exon-scaffold_36-1491911889:1096503..1098001Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1510915933:1096503..1098001TCONS_00061619-exon-scaffold_36-1510915933:1096503..1098001Clytia hemisphaericaexon
TCONS_00061619-exon-scaffold_36-1575043694:1096503..1098001TCONS_00061619-exon-scaffold_36-1575043694:1096503..1098001Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1078913..1098001 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.45462	4.10998	2.4769	4.78783	1.29307	1.52428	2.7737	2.88524	0.340562	1.22282	1.11528e-06	0	4.22663	1.12443	1.47476	2.84988	3.51282	4.67004	3.57151	4.74599	2.0969	2.93691	1.77722	4.06594	28.7951	14.7006	26.3484	28.5744	1.21229	0.614482
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061619 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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