TCONS_00061615 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061615
Unique NameTCONS_00061615
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061615 ID=TCONS_00061615|Name=TCONS_00061615|organism=Clytia hemisphaerica|type=transcript|length=2063bp
GTGTTATTTAAATCTTTTAGTCAAATCTCCGCCCTTGTGAATTAAATGCT
CATTATTCTCTTGGGAGTTCCGCTTTTGAACAAAGAATCGAATAAATACC
ACAAATCCTTGATCAACAATCAAATAAATCATTCAGTCAATGAATTGTTA
TCAGATCGTCGAGTCTTATGAAAATCGAACTTGAGAGTTCAAGACCAATA
ATGGGGATGCTACGTCGATTGCTCTTCATTTCGCTATTGATCTCCATTGT
CCAATCACACAAACTTGCAAAAAGATCAACACCATCGTATCGAGTAGAAG
GTTGTTTTCGGTCGGCACCTGGTGGtggaaaatcacaaaatatggGTCAT
TCCGCATCTAATGTAAGATGTCAAGATATTTGTCGTGACCATGGCTACAT
CCTTGCTGCTACCAAAGGTACAACGTGTCATTGTCGAAACATTTATCCTC
AAGGTCGTAAAGTAGCTGATAGTCAATGTCGAACGAGATGCAGATCTTGG
TTATCGTGTAACAATGCACAAGAATGCTGTGGAGGTTCACAGGCGTACAC
TGTCAGTGTGGTGGGAAATATTGATGTTGCAAAGCAAGTTTTGAGAAGGA
TTGCCCATAAATGGCAAGTTAGCACTCATTATCGAAAACACATGAGGAAT
TTTGTCAACAAACCACAGTTTAGACACGTAGAAGCTGATTGGTGGAGGAG
TTTTGATGTAAAAGGTTGGAGTAATTGTCCGGATGGAACCTACATGACTG
GTGTTTGGCGTAATAACAATGATCAGGATAATGATGGCATCCACTTGATC
GAACTGGCTGAATGTAAAAGCGCTGCTGCCCATCTGTTTTCGGCTGGAAA
GGGTGATCAAGACTGTTACAAACTCAACATCTGGAAAACATGGGACAGTA
GAAACTGGGCCACCTGCAAAGCTGGTTATTACATGTCGGGAATTTACAAT
ACTGAAGGACATCGTTTGCATAATATCGAAGAATTCCACTGCTGTCGACC
AAAATCGCAACACAAAAGCTGGGGAAGTTGCTACAACCACGATGCATGGG
CCTCCTTGAATGATAAAGGTTGGACAAAATGTAACAACGGCTATTATATG
GTTGGTATGTATCGGAATGACTGCAATAATTTGTGGTGTATTGAGGAATT
CAAATGTTGTCAAATGGGAAGTTATAATCAAGATTCGTACGTCGATAAAC
CGATCATCACCatcaagACTATGGGAACAGATGGTCGACTTAAAGAATGC
ACCATGGATGCCATGGATAAAACTCCAGAAAGCAAGACCTATTCTTGTAA
AGCTGTATCGTCAcgtcaaaacattttgaaattagatGCTGTCGAGTTCA
AAGTCGAAGATAAGACACAACCTACAACAGCAAAACCCGAACgcgtcaaa
aacttcaaaccagTCATCTGTTCTGCTTCTAACAACGCCTACACTTGCac
caaaacattaaaaacagcCATCGAGACAACCACAAGTCTGGTGATTGGAA
CAGGTTTTGAGATGGGCGTTTCCGTTAGTAACACAGTTGGAGTTTCAGTT
GAAGCCTTTGGCGTCAGTGCTTCATCAGAGTTCTCAGTTCAAGTTTCTGC
ATCAACTTCTTTCAACGTCGAAAGAACTAAATCGAAAACCATTACCGTTG
AAGACGAAACAAAAGTTGATGTCAAAGTCGCTGCCCACAAACAAATCATG
ATTGACCTCCTTCGCAAGAAAGTGGATATCATCTATAAATGGAAAGGTAT
TTTCCGCCTTCTTGGTAAATACAAGCTCTCTTGGAGTAATGGTGATCAAA
CTACACAGGATATCACTACAGTCTTGTCTGGTACGAACCGAGACATGTAT
GCTTTTGGCACCTGGAATTACCCTGGTACCGACGTCCTTCAAGTTTTGGT
GACTGATCAATACGGTAACAAGAAGACTGAATGTCAACACAAAACTGGAT
CTAAAAAAGACTGTTCCGTAGCAGGACTCTGACAACTTTTCTGAGTTTCA
AAATACACTTAAACTTTTGGTTTATGTTCCAGTTACTTTAACCCTTATAG
ATTCATTGTTAgt
Run BLAST on NCBI

protein sequence of Unknown secreted protein

>TCONS_00061615-protein ID=TCONS_00061615-protein|Name=Unknown secreted protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MKIELESSRPIMGMLRRLLFISLLISIVQSHKLAKRSTPSYRVEGCFRSA
PGGGKSQNMGHSASNVRCQDICRDHGYILAATKGTTCHCRNIYPQGRKVA
DSQCRTRCRSWLSCNNAQECCGGSQAYTVSVVGNIDVAKQVLRRIAHKWQ
VSTHYRKHMRNFVNKPQFRHVEADWWRSFDVKGWSNCPDGTYMTGVWRNN
NDQDNDGIHLIELAECKSAAAHLFSAGKGDQDCYKLNIWKTWDSRNWATC
KAGYYMSGIYNTEGHRLHNIEEFHCCRPKSQHKSWGSCYNHDAWASLNDK
GWTKCNNGYYMVGMYRNDCNNLWCIEEFKCCQMGSYNQDSYVDKPIITIK
TMGTDGRLKECTMDAMDKTPESKTYSCKAVSSRQNILKLDAVEFKVEDKT
QPTTAKPERVKNFKPVICSASNNAYTCTKTLKTAIETTTSLVIGTGFEMG
VSVSNTVGVSVEAFGVSASSEFSVQVSASTSFNVERTKSKTITVEDETKV
DVKVAAHKQIMIDLLRKKVDIIYKWKGIFRLLGKYKLSWSNGDQTTQDIT
TVLSGTNRDMYAFGTWNYPGTDVLQVLVTDQYGNKKTECQHKTGSKKDCS
VAGL
Run BLAST on NCBI

transcript from alignment at scaffold_36:1043652..1047840+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061615 ID=TCONS_00061615|Name=TCONS_00061615|organism=Clytia hemisphaerica|type=transcript|length=4189bp|location=Sequence derived from alignment at scaffold_36:1043652..1047840+ (Clytia hemisphaerica)
GTGTTATTTAAATCTTTTAGTCAAATCTCCGCCCTTGTGAATTAAATGCT CATTATTCTCTTGGGAGTTCCGCTTTTGAACAAAGAATCGAATAAATACC ACAAATCCTTGATCAACAATCAAATAAATCATTCAGTCAATGAATTGTTA TCAGATCGTCGAGTCTTATGAAAATCGAACTTGAGAGGTAGGGTGAAACA ATTTTGGTAAAATGTGCTTTACTTCCAGAGAAGAAGATTCTCAGGAAAAT TTGTTGTTGTAAAAAATGACACAAAACGAGAACTGACTAACCTATAGGTG TACACAGATTCGTTTACATGTCACAGATCATTAAGAGAGATTATATTTCA AGATCGAAATACTATCAGAGGTTTTCACTCACCACTGGTAAACGTGCGAA TAACGAAATATAAAACTCGAAGATTTTAACATAGTAATACTTTTCTACTT GTAGTTCAAGACCAATAATGGGGATGCTACGTCGATTGCTCTTCATTTCG CTATTGATCTCCATTGTCCAATCACACAAACTTGCAAAAAGATCAACACC ATCGTATCGAGTAGAAGGTTGTTTTCGGTCGGCACCTGGTGGtggaaaat cacaaaatatggGTCATTCCGCATCTAATGTAAGATGTCAAGATATTTGT CGTGACCATGGCTACATCCTTGCTGCTACCAAAGGTACAACGTGTCATTG TCGAAACATTTATCCTCAAGGTCGTAAAGTAGCTGATAGTCAATGTCGAA CGAGATGCAGATCTTGGTTATCGTGTAACAATGCACAAGAATGCTGTGGA GGTTCACAGGCGTACACTGTCAGTGTGGTGGGAAATATTGATGTTGCAAA GCAAGTAAGTTCTAAACTCAATAGTATGAAATAGGTTGTTTACTTTTATG GTGACCTTTTCCGATTTTAACAAATACTAACTAATTCCACCCTACAAAAC TCGTGAGTTACAGTATCAACATAGCAGGgcgtctgaaaaataaaatgctt ACTCACAAAAGTAGAAATTTTCACCAGATGGTATCCAAAGGttataaaaa tcaaagaatggacattttctaaaatattattGGATAACTGAAGTCCACAT GCAAATCGGCTTGGTGTCTTTTAAAGCGCTTTCTAAATTTCAGGTTTTGA GAAGGATTGCCCATAAATGGCAAGTTAGCACTCATTATCGAAAACACATG AGGAATTTTGTCAACAAACCACAGTTTAGACACGTAGAAGCTGATTGGTG GAGGAGTTTTGATGTAAAAGGTTGGAGTAATTGTCCGGATGGAACCTACA TGACTGGTGTTTGGCGTAATAACAATGATCAGGATAATGATGGCATCCAC TTGATCGAACTGGCTGAATGTAAAAGCGCTGCTGCCCATCTGTTTTCGGG TGAGTTGTCttattttacacatttttttggGAGAACATCCGGAATTTTTG AAACCgtcggatattcttaactttttgggtttgaactctaaaaatgttcc taaaaCATGTTAAGTTTGTATTTTGGTGTGTTTTCCTAAAAAGAAGCCGG GTTTTGAGACCTCAAAGCCATTGGATGTTCATAAACAAGTTATGAAAGGC GTGAAAAACAATTGCCGTCTGCTTGATAATTTCATAACTTCATGCGAGAT ttggagagttccgatttataATATAGATAATTCGGAAATGCCAACTTATA ACGTATGATTATGATATTTCTTTTTAACTCCCCGTTAATTAATTGTCTCG CTTGTCTTTTTCAGCTGGAAAGGGTGATCAAGACTGTTACAAACTCAACA TCTGGAAAACATGGGACAGTAGAAACTGGGCCACCTGCAAAGCTGGTTAT TACATGTCGGGAATTTACAATACTGAAGGACATCGTTTGCATAATATCGA AGAATTCCACTGCTGTCGACCAAAATCGCAACACAAAAGCTGGGGAAGTT GCTACAACCACGATGCATGGGCCTCCTTGAATGATAAAGGTTGGACAAAA TGTAACAACGGCTATTATATGGTTGGTATGTATCGGAATGACTGCAATAA TTTGTGGTGTATTGAGGAATTCAAATGTTGTCAAATGGGAAGTTATAATC AAGATTCGTACGTCGATAAACCGATCATCACCatcaaggtaaaaaaaaaa tgcttTATGTGATTGCTATGGGAACCCatgcttttttttctttaccCTTT GAATTTTGGATCTTGAAAGTTTCTAAGTTAGGTATTGCAGTGTGTGCATG ACAGGTTGATTAATAATTAAATGCCATCTTCAGacacaaactttcgcgag cagaaatttCCTCACATTAATGAATTTgaggaaaacaaatttttcacaaG CACAAGACtttcgtgaatcgttggataaatatcatgaatttcaaaaaaaa ttgacttaaaaaggACATTTTCGTCCAGGCTAAAAAATATTGCTTAAGAA TGTGCTAAATGTTTGTTATTTAAACTTTATCACAAATTCGAATTTTTAcg attaattttaattttttaaagaaattttgaattgtcCGTCCTGTCACACA CACGATGATTCTAAGAAGCCatctttttctttcctttctcaACCAGACTA TGGGAACAGATGGTCGACTTAAAGAATGCACCATGGATGCCATGGATAAA ACTCCAGAAAGCAAGACCTATTCTTGTAAAGCTGTATCGTCAcgtcaaaa cattttgaaattagatGCTGTCGAGTTCAAAGTCGAAGATAAGACACAAC CTACAACAGCAAAACCCGAACgcgtcaaaaacttcaaaccagTCATCTGT TCTGCTTCTAACAACGCCTACACTTGCaccaaaacattaaaaacagcCAT CGAGACAACCACAAGTCTGGTGATTGGAACAGGTTTTGAGATGGGCGTTT CCGTTAGTAACACAGTTGGAGTTTCAGTTGAAGCCTTTGGCGTCAGTGCT TCATCAGAGTTCTCAGTTCAAGTTTCTGCATCAACTTCTTTCAACGTCGA AAGAACTAAATCGAAAACCATTACCGTTGAAGACGAAACAAAAGTTGATG TCAAAGTCGCTGCCCACAAACAAATCATGATTGACCTCCTTCGCAAGAAA GTGGATATCATCTATAAATGGAAAGGTATTTTCCGCCTTCTTGGTAAATA CAAGCTCTCTTGGAGTAATGGTGATCAAACTACACAGGATATCACTACAG TCTTGTCTGGTACGAACCGAGACATGTATGCTTTTGGCACCTGGAATTAC CCTGGTACCGACGTCCTTCAAGTTTTGGTGACTGATCAATACGGTAACAA GAAGACTGAATGTCAACACAAAACTGGATCTAAAAAAGACTGTTCCGTAG CAGGACTCTGACAACTTTTCTGAGTTTCAAAATACACTTAAACTTTTGGT TTATGTTCCAGTTACTTTAACCCTTATAGGTATATTTTACTTAGCTCGTA AATTGTAATCTTTAGTTAATGTCAAACTCGTATGAATATAAAtgtttttg gtaaaattattcCGCTAATAAATCATCAATTCTGAGGAGTTAACCCCTTT CAAGCGTACGAGATCGAAAGATTTTTGCGAttctttaaataaattttcag gaATTTCTAGGTCCACAAATACTTCAAAGTACTTCAAATACTTCAAAAGA ATGAACAAACTTCTAGAACTCTCTGATGCGATACATGTGTAAAACTTGGT TCTGATACATTGCTATTGAAGGAGATTTGTTTTAAgatttatcttttttg aaccAAGTTAAAGCCCTGCAAAGTAGGCAAAATGATCTTTCGTTGAAAGA AAGCTCAGGGGCGGTACAGCCGCATGGTTCTAAACCCACAGGGTACTAAC CCTCATTTCAGGGAAATTCGTTTTAGGTACCACAATCCCCTTTTTAGTAT CGGATACTAATTTTTTTGAGTCAATTTTACctcaccaaaatttgaaaaag ctcAGCAAActctggaaaaaaaattgaaaattagtaGATGagtgaaacaa aaaatatttccgtTAAATGAAGTTTAATTTTTGTCGGAAAACTAGGCTAA TTTCTGATTTCCCAATATTGGTAAACATTTACCAATTACTCCCACGTAAT ACCAAATTTTAGCACCGGGTACTAGCTTGAAATGGGTGAAATACTCACCC ACAAATGAAGTACCATCTTTTTTTAGATTCATTGTTAgt

Coding sequence (CDS) from alignment at scaffold_36:1043652..1047840+

>TCONS_00061615 ID=TCONS_00061615|Name=TCONS_00061615|organism=Clytia hemisphaerica|type=CDS|length=9075bp|location=Sequence derived from alignment at scaffold_36:1043652..1047840+ (Clytia hemisphaerica)
ATGAAAATCGAACTTGAGAGTTCAAGACCAATAATGGGGATGCTACGTCG
ATTGCTCTTCATTTCGCTATTGATCTCCATTGTCCAATCACACAAACTTG
CAAAAAGATCAACACCATCGTATCGAGTAGAAGGTTGTTTTCGGTCGGCA
CCTGGTGGtggaaaatcacaaaatatggGTCATTCCGCATCTAATGTAAG
ATGTCAAGATATTTGTCGTGACCATGGCTACATCCTTGCTGCTACCAAAG
GTACAACGTGTCATTGTCGAAACATTTATCCTCAAGGTCGTAAAGTAGCT
GATAGTCAATGTCGAACGAGATGCAGATCTTGGTTATCGTGTAACAATGC
ACAAGAATGCTGTGGAGGTTCACAGGCGTACACTGTCAGTGTGGTGGGAA
ATATTGATGTTGCAAAGCAAGTTTTGAGAAGGATTGCCCATAAATGGCAA
GTTAGCACTCATTATCGAAAACACATGAGGAATTTTGTCAACAAACCACA
GTTTAGACACGTAGAAGCTGATTGGTGGAGGAGTTTTGATGTAAAAGGTT
GGAGTAATTGTCCGGATGGAACCTACATGACTGGTGTTTGGCGTAATAAC
AATGATCAGGATAATGATGGCATCCACTTGATCGAACTGGCTGAATGTAA
AAGCGCTGCTGCCCATCTGTTTTCGGCTGGAAAGGGTGATCAAGACTGTT
ACAAACTCAACATCTGGAAAACATGGGACAGTAGAAACTGGGCCACCTGC
AAAGCTGGTTATTACATGTCGGGAATTTACAATACTGAAGGACATCGTTT
GCATAATATCGAAGAATTCCACTGCTGTCGACCAAAATCGCAACACAAAA
GCTGGGGAAGTTGCTACAACCACGATGCATGGGCCTCCTTGAATGATAAA
GGTTGGACAAAATGTAACAACGGCTATTATATGGTTGGTATGTATCGGAA
TGACTGCAATAATTTGTGGTGTATTGAGGAATTCAAATGTTGTCAAATGG
GAAGTTATAATCAAGATTCGTACGTCGATAAACCGATCATCACCatcaag
ACTATGGGAACAGATGGTCGACTTAAAGAATGCACCATGGATGCCATGGA
TAAAACTCCAGAAAGCAAGACCTATTCTTGTAAAGCTGTATCGTCAcgtc
aaaacattttgaaattagatGCTGTCGAGTTCAAAGTCGAAGATAAGACA
CAACCTACAACAGCAAAACCCGAACgcgtcaaaaacttcaaaccagTCAT
CTGTTCTGCTTCTAACAACGCCTACACTTGCaccaaaacattaaaaacag
cCATCGAGACAACCACAAGTCTGGTGATTGGAACAGGTTTTGAGATGGGC
GTTTCCGTTAGTAACACAGTTGGAGTTTCAGTTGAAGCCTTTGGCGTCAG
TGCTTCATCAGAGTTCTCAGTTCAAGTTTCTGCATCAACTTCTTTCAACG
TCGAAAGAACTAAATCGAAAACCATTACCGTTGAAGACGAAACAAAAGTT
GATGTCAAAGTCGCTGCCCACAAACAAATCATGATTGACCTCCTTCGCAA
GAAAGTGGATATCATCTATAAATGGAAAGGTATTTTCCGCCTTCTTGGTA
AATACAAGCTCTCTTGGAGTAATGGTGATCAAACTACACAGGATATCACT
ACAGTCTTGTCTGGTACGAACCGAGACATGTATGCTTTTGGCACCTGGAA
TTACCCTGGTACCGACGTCCTTCAAGTTTTGGTGACTGATCAATACGGTA
ACAAGAAGACTGAATGTCAACACAAAACTGGATCTAAAAAAGACTGTTCC
GTAGCAGGACTCTGAATGAAAATCGAACTTGAGAGTTCAAGACCAATAAT
GGGGATGCTACGTCGATTGCTCTTCATTTCGCTATTGATCTCCATTGTCC
AATCACACAAACTTGCAAAAAGATCAACACCATCGTATCGAGTAGAAGGT
TGTTTTCGGTCGGCACCTGGTGGtggaaaatcacaaaatatggGTCATTC
CGCATCTAATGTAAGATGTCAAGATATTTGTCGTGACCATGGCTACATCC
TTGCTGCTACCAAAGGTACAACGTGTCATTGTCGAAACATTTATCCTCAA
GGTCGTAAAGTAGCTGATAGTCAATGTCGAACGAGATGCAGATCTTGGTT
ATCGTGTAACAATGCACAAGAATGCTGTGGAGGTTCACAGGCGTACACTG
TCAGTGTGGTGGGAAATATTGATGTTGCAAAGCAAGTTTTGAGAAGGATT
GCCCATAAATGGCAAGTTAGCACTCATTATCGAAAACACATGAGGAATTT
TGTCAACAAACCACAGTTTAGACACGTAGAAGCTGATTGGTGGAGGAGTT
TTGATGTAAAAGGTTGGAGTAATTGTCCGGATGGAACCTACATGACTGGT
GTTTGGCGTAATAACAATGATCAGGATAATGATGGCATCCACTTGATCGA
ACTGGCTGAATGTAAAAGCGCTGCTGCCCATCTGTTTTCGGCTGGAAAGG
GTGATCAAGACTGTTACAAACTCAACATCTGGAAAACATGGGACAGTAGA
AACTGGGCCACCTGCAAAGCTGGTTATTACATGTCGGGAATTTACAATAC
TGAAGGACATCGTTTGCATAATATCGAAGAATTCCACTGCTGTCGACCAA
AATCGCAACACAAAAGCTGGGGAAGTTGCTACAACCACGATGCATGGGCC
TCCTTGAATGATAAAGGTTGGACAAAATGTAACAACGGCTATTATATGGT
TGGTATGTATCGGAATGACTGCAATAATTTGTGGTGTATTGAGGAATTCA
AATGTTGTCAAATGGGAAGTTATAATCAAGATTCGTACGTCGATAAACCG
ATCATCACCatcaagACTATGGGAACAGATGGTCGACTTAAAGAATGCAC
CATGGATGCCATGGATAAAACTCCAGAAAGCAAGACCTATTCTTGTAAAG
CTGTATCGTCAcgtcaaaacattttgaaattagatGCTGTCGAGTTCAAA
GTCGAAGATAAGACACAACCTACAACAGCAAAACCCGAACgcgtcaaaaa
cttcaaaccagTCATCTGTTCTGCTTCTAACAACGCCTACACTTGCacca
aaacattaaaaacagcCATCGAGACAACCACAAGTCTGGTGATTGGAACA
GGTTTTGAGATGGGCGTTTCCGTTAGTAACACAGTTGGAGTTTCAGTTGA
AGCCTTTGGCGTCAGTGCTTCATCAGAGTTCTCAGTTCAAGTTTCTGCAT
CAACTTCTTTCAACGTCGAAAGAACTAAATCGAAAACCATTACCGTTGAA
GACGAAACAAAAGTTGATGTCAAAGTCGCTGCCCACAAACAAATCATGAT
TGACCTCCTTCGCAAGAAAGTGGATATCATCTATAAATGGAAAGGTATTT
TCCGCCTTCTTGGTAAATACAAGCTCTCTTGGAGTAATGGTGATCAAACT
ACACAGGATATCACTACAGTCTTGTCTGGTACGAACCGAGACATGTATGC
TTTTGGCACCTGGAATTACCCTGGTACCGACGTCCTTCAAGTTTTGGTGA
CTGATCAATACGGTAACAAGAAGACTGAATGTCAACACAAAACTGGATCT
AAAAAAGACTGTTCCGTAGCAGGACTCTGAATGAAAATCGAACTTGAGAG
TTCAAGACCAATAATGGGGATGCTACGTCGATTGCTCTTCATTTCGCTAT
TGATCTCCATTGTCCAATCACACAAACTTGCAAAAAGATCAACACCATCG
TATCGAGTAGAAGGTTGTTTTCGGTCGGCACCTGGTGGtggaaaatcaca
aaatatggGTCATTCCGCATCTAATGTAAGATGTCAAGATATTTGTCGTG
ACCATGGCTACATCCTTGCTGCTACCAAAGGTACAACGTGTCATTGTCGA
AACATTTATCCTCAAGGTCGTAAAGTAGCTGATAGTCAATGTCGAACGAG
ATGCAGATCTTGGTTATCGTGTAACAATGCACAAGAATGCTGTGGAGGTT
CACAGGCGTACACTGTCAGTGTGGTGGGAAATATTGATGTTGCAAAGCAA
GTTTTGAGAAGGATTGCCCATAAATGGCAAGTTAGCACTCATTATCGAAA
ACACATGAGGAATTTTGTCAACAAACCACAGTTTAGACACGTAGAAGCTG
ATTGGTGGAGGAGTTTTGATGTAAAAGGTTGGAGTAATTGTCCGGATGGA
ACCTACATGACTGGTGTTTGGCGTAATAACAATGATCAGGATAATGATGG
CATCCACTTGATCGAACTGGCTGAATGTAAAAGCGCTGCTGCCCATCTGT
TTTCGGCTGGAAAGGGTGATCAAGACTGTTACAAACTCAACATCTGGAAA
ACATGGGACAGTAGAAACTGGGCCACCTGCAAAGCTGGTTATTACATGTC
GGGAATTTACAATACTGAAGGACATCGTTTGCATAATATCGAAGAATTCC
ACTGCTGTCGACCAAAATCGCAACACAAAAGCTGGGGAAGTTGCTACAAC
CACGATGCATGGGCCTCCTTGAATGATAAAGGTTGGACAAAATGTAACAA
CGGCTATTATATGGTTGGTATGTATCGGAATGACTGCAATAATTTGTGGT
GTATTGAGGAATTCAAATGTTGTCAAATGGGAAGTTATAATCAAGATTCG
TACGTCGATAAACCGATCATCACCatcaagACTATGGGAACAGATGGTCG
ACTTAAAGAATGCACCATGGATGCCATGGATAAAACTCCAGAAAGCAAGA
CCTATTCTTGTAAAGCTGTATCGTCAcgtcaaaacattttgaaattagat
GCTGTCGAGTTCAAAGTCGAAGATAAGACACAACCTACAACAGCAAAACC
CGAACgcgtcaaaaacttcaaaccagTCATCTGTTCTGCTTCTAACAACG
CCTACACTTGCaccaaaacattaaaaacagcCATCGAGACAACCACAAGT
CTGGTGATTGGAACAGGTTTTGAGATGGGCGTTTCCGTTAGTAACACAGT
TGGAGTTTCAGTTGAAGCCTTTGGCGTCAGTGCTTCATCAGAGTTCTCAG
TTCAAGTTTCTGCATCAACTTCTTTCAACGTCGAAAGAACTAAATCGAAA
ACCATTACCGTTGAAGACGAAACAAAAGTTGATGTCAAAGTCGCTGCCCA
CAAACAAATCATGATTGACCTCCTTCGCAAGAAAGTGGATATCATCTATA
AATGGAAAGGTATTTTCCGCCTTCTTGGTAAATACAAGCTCTCTTGGAGT
AATGGTGATCAAACTACACAGGATATCACTACAGTCTTGTCTGGTACGAA
CCGAGACATGTATGCTTTTGGCACCTGGAATTACCCTGGTACCGACGTCC
TTCAAGTTTTGGTGACTGATCAATACGGTAACAAGAAGACTGAATGTCAA
CACAAAACTGGATCTAAAAAAGACTGTTCCGTAGCAGGACTCTGAATGAA
AATCGAACTTGAGAGTTCAAGACCAATAATGGGGATGCTACGTCGATTGC
TCTTCATTTCGCTATTGATCTCCATTGTCCAATCACACAAACTTGCAAAA
AGATCAACACCATCGTATCGAGTAGAAGGTTGTTTTCGGTCGGCACCTGG
TGGtggaaaatcacaaaatatggGTCATTCCGCATCTAATGTAAGATGTC
AAGATATTTGTCGTGACCATGGCTACATCCTTGCTGCTACCAAAGGTACA
ACGTGTCATTGTCGAAACATTTATCCTCAAGGTCGTAAAGTAGCTGATAG
TCAATGTCGAACGAGATGCAGATCTTGGTTATCGTGTAACAATGCACAAG
AATGCTGTGGAGGTTCACAGGCGTACACTGTCAGTGTGGTGGGAAATATT
GATGTTGCAAAGCAAGTTTTGAGAAGGATTGCCCATAAATGGCAAGTTAG
CACTCATTATCGAAAACACATGAGGAATTTTGTCAACAAACCACAGTTTA
GACACGTAGAAGCTGATTGGTGGAGGAGTTTTGATGTAAAAGGTTGGAGT
AATTGTCCGGATGGAACCTACATGACTGGTGTTTGGCGTAATAACAATGA
TCAGGATAATGATGGCATCCACTTGATCGAACTGGCTGAATGTAAAAGCG
CTGCTGCCCATCTGTTTTCGGCTGGAAAGGGTGATCAAGACTGTTACAAA
CTCAACATCTGGAAAACATGGGACAGTAGAAACTGGGCCACCTGCAAAGC
TGGTTATTACATGTCGGGAATTTACAATACTGAAGGACATCGTTTGCATA
ATATCGAAGAATTCCACTGCTGTCGACCAAAATCGCAACACAAAAGCTGG
GGAAGTTGCTACAACCACGATGCATGGGCCTCCTTGAATGATAAAGGTTG
GACAAAATGTAACAACGGCTATTATATGGTTGGTATGTATCGGAATGACT
GCAATAATTTGTGGTGTATTGAGGAATTCAAATGTTGTCAAATGGGAAGT
TATAATCAAGATTCGTACGTCGATAAACCGATCATCACCatcaagACTAT
GGGAACAGATGGTCGACTTAAAGAATGCACCATGGATGCCATGGATAAAA
CTCCAGAAAGCAAGACCTATTCTTGTAAAGCTGTATCGTCAcgtcaaaac
attttgaaattagatGCTGTCGAGTTCAAAGTCGAAGATAAGACACAACC
TACAACAGCAAAACCCGAACgcgtcaaaaacttcaaaccagTCATCTGTT
CTGCTTCTAACAACGCCTACACTTGCaccaaaacattaaaaacagcCATC
GAGACAACCACAAGTCTGGTGATTGGAACAGGTTTTGAGATGGGCGTTTC
CGTTAGTAACACAGTTGGAGTTTCAGTTGAAGCCTTTGGCGTCAGTGCTT
CATCAGAGTTCTCAGTTCAAGTTTCTGCATCAACTTCTTTCAACGTCGAA
AGAACTAAATCGAAAACCATTACCGTTGAAGACGAAACAAAAGTTGATGT
CAAAGTCGCTGCCCACAAACAAATCATGATTGACCTCCTTCGCAAGAAAG
TGGATATCATCTATAAATGGAAAGGTATTTTCCGCCTTCTTGGTAAATAC
AAGCTCTCTTGGAGTAATGGTGATCAAACTACACAGGATATCACTACAGT
CTTGTCTGGTACGAACCGAGACATGTATGCTTTTGGCACCTGGAATTACC
CTGGTACCGACGTCCTTCAAGTTTTGGTGACTGATCAATACGGTAACAAG
AAGACTGAATGTCAACACAAAACTGGATCTAAAAAAGACTGTTCCGTAGC
AGGACTCTGAATGAAAATCGAACTTGAGAGTTCAAGACCAATAATGGGGA
TGCTACGTCGATTGCTCTTCATTTCGCTATTGATCTCCATTGTCCAATCA
CACAAACTTGCAAAAAGATCAACACCATCGTATCGAGTAGAAGGTTGTTT
TCGGTCGGCACCTGGTGGtggaaaatcacaaaatatggGTCATTCCGCAT
CTAATGTAAGATGTCAAGATATTTGTCGTGACCATGGCTACATCCTTGCT
GCTACCAAAGGTACAACGTGTCATTGTCGAAACATTTATCCTCAAGGTCG
TAAAGTAGCTGATAGTCAATGTCGAACGAGATGCAGATCTTGGTTATCGT
GTAACAATGCACAAGAATGCTGTGGAGGTTCACAGGCGTACACTGTCAGT
GTGGTGGGAAATATTGATGTTGCAAAGCAAGTTTTGAGAAGGATTGCCCA
TAAATGGCAAGTTAGCACTCATTATCGAAAACACATGAGGAATTTTGTCA
ACAAACCACAGTTTAGACACGTAGAAGCTGATTGGTGGAGGAGTTTTGAT
GTAAAAGGTTGGAGTAATTGTCCGGATGGAACCTACATGACTGGTGTTTG
GCGTAATAACAATGATCAGGATAATGATGGCATCCACTTGATCGAACTGG
CTGAATGTAAAAGCGCTGCTGCCCATCTGTTTTCGGCTGGAAAGGGTGAT
CAAGACTGTTACAAACTCAACATCTGGAAAACATGGGACAGTAGAAACTG
GGCCACCTGCAAAGCTGGTTATTACATGTCGGGAATTTACAATACTGAAG
GACATCGTTTGCATAATATCGAAGAATTCCACTGCTGTCGACCAAAATCG
CAACACAAAAGCTGGGGAAGTTGCTACAACCACGATGCATGGGCCTCCTT
GAATGATAAAGGTTGGACAAAATGTAACAACGGCTATTATATGGTTGGTA
TGTATCGGAATGACTGCAATAATTTGTGGTGTATTGAGGAATTCAAATGT
TGTCAAATGGGAAGTTATAATCAAGATTCGTACGTCGATAAACCGATCAT
CACCatcaagACTATGGGAACAGATGGTCGACTTAAAGAATGCACCATGG
ATGCCATGGATAAAACTCCAGAAAGCAAGACCTATTCTTGTAAAGCTGTA
TCGTCAcgtcaaaacattttgaaattagatGCTGTCGAGTTCAAAGTCGA
AGATAAGACACAACCTACAACAGCAAAACCCGAACgcgtcaaaaacttca
aaccagTCATCTGTTCTGCTTCTAACAACGCCTACACTTGCaccaaaaca
ttaaaaacagcCATCGAGACAACCACAAGTCTGGTGATTGGAACAGGTTT
TGAGATGGGCGTTTCCGTTAGTAACACAGTTGGAGTTTCAGTTGAAGCCT
TTGGCGTCAGTGCTTCATCAGAGTTCTCAGTTCAAGTTTCTGCATCAACT
TCTTTCAACGTCGAAAGAACTAAATCGAAAACCATTACCGTTGAAGACGA
AACAAAAGTTGATGTCAAAGTCGCTGCCCACAAACAAATCATGATTGACC
TCCTTCGCAAGAAAGTGGATATCATCTATAAATGGAAAGGTATTTTCCGC
CTTCTTGGTAAATACAAGCTCTCTTGGAGTAATGGTGATCAAACTACACA
GGATATCACTACAGTCTTGTCTGGTACGAACCGAGACATGTATGCTTTTG
GCACCTGGAATTACCCTGGTACCGACGTCCTTCAAGTTTTGGTGACTGAT
CAATACGGTAACAAGAAGACTGAATGTCAACACAAAACTGGATCTAAAAA
AGACTGTTCCGTAGCAGGACTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038648XLOC_038648Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061615-exon-scaffold_36-1491911889:1043652..1043838TCONS_00061615-exon-scaffold_36-1491911889:1043652..1043838Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1043652..1043838TCONS_00061615-exon-scaffold_36-1510915933:1043652..1043838Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1043652..1043838TCONS_00061615-exon-scaffold_36-1575043694:1043652..1043838Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1491911889:1044106..1044505TCONS_00061615-exon-scaffold_36-1491911889:1044106..1044505Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1044106..1044505TCONS_00061615-exon-scaffold_36-1510915933:1044106..1044505Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1044106..1044505TCONS_00061615-exon-scaffold_36-1575043694:1044106..1044505Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1491911889:1044795..1045050TCONS_00061615-exon-scaffold_36-1491911889:1044795..1045050Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1044795..1045050TCONS_00061615-exon-scaffold_36-1510915933:1044795..1045050Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1044795..1045050TCONS_00061615-exon-scaffold_36-1575043694:1044795..1045050Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1491911889:1045416..1045789TCONS_00061615-exon-scaffold_36-1491911889:1045416..1045789Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1045416..1045789TCONS_00061615-exon-scaffold_36-1510915933:1045416..1045789Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1045416..1045789TCONS_00061615-exon-scaffold_36-1575043694:1045416..1045789Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1491911889:1046248..1047080TCONS_00061615-exon-scaffold_36-1491911889:1046248..1047080Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1046248..1047080TCONS_00061615-exon-scaffold_36-1510915933:1046248..1047080Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1046248..1047080TCONS_00061615-exon-scaffold_36-1575043694:1046248..1047080Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1491911889:1047828..1047840TCONS_00061615-exon-scaffold_36-1491911889:1047828..1047840Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1510915933:1047828..1047840TCONS_00061615-exon-scaffold_36-1510915933:1047828..1047840Clytia hemisphaericaexon
TCONS_00061615-exon-scaffold_36-1575043694:1047828..1047840TCONS_00061615-exon-scaffold_36-1575043694:1047828..1047840Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Unknown secreted proteinTCONS_00061615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1043652..1047840 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2993.64 2949.9 1597.55 1303.82 3.46721 3.31967 0.460663 0.552171 0.137419 1.22441 0 0.180803 0.197754 0.104458 0 0.086857 22.9303 16.9139 0.14469 0.0559516 27.8749 29.7104 1002.75 820.194 3.14979 2.63973 116.733 93.4789 559.566 672.86
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061615 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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