XLOC_038648 (gene) - C. hemisphaerica

Overview
NameXLOC_038648
Unique NameXLOC_038648
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:1043652..1047840+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038648 ID=XLOC_038648|Name=XLOC_038648|organism=Clytia hemisphaerica|type=gene|length=4189bp|location=Sequence derived from alignment at scaffold_36:1043652..1047840+ (Clytia hemisphaerica)
GTGTTATTTAAATCTTTTAGTCAAATCTCCGCCCTTGTGAATTAAATGCT
CATTATTCTCTTGGGAGTTCCGCTTTTGAACAAAGAATCGAATAAATACC
ACAAATCCTTGATCAACAATCAAATAAATCATTCAGTCAATGAATTGTTA
TCAGATCGTCGAGTCTTATGAAAATCGAACTTGAGAGGTAGGGTGAAACA
ATTTTGGTAAAATGTGCTTTACTTCCAGAGAAGAAGATTCTCAGGAAAAT
TTGTTGTTGTAAAAAATGACACAAAACGAGAACTGACTAACCTATAGGTG
TACACAGATTCGTTTACATGTCACAGATCATTAAGAGAGATTATATTTCA
AGATCGAAATACTATCAGAGGTTTTCACTCACCACTGGTAAACGTGCGAA
TAACGAAATATAAAACTCGAAGATTTTAACATAGTAATACTTTTCTACTT
GTAGTTCAAGACCAATAATGGGGATGCTACGTCGATTGCTCTTCATTTCG
CTATTGATCTCCATTGTCCAATCACACAAACTTGCAAAAAGATCAACACC
ATCGTATCGAGTAGAAGGTTGTTTTCGGTCGGCACCTGGTGGtggaaaat
cacaaaatatggGTCATTCCGCATCTAATGTAAGATGTCAAGATATTTGT
CGTGACCATGGCTACATCCTTGCTGCTACCAAAGGTACAACGTGTCATTG
TCGAAACATTTATCCTCAAGGTCGTAAAGTAGCTGATAGTCAATGTCGAA
CGAGATGCAGATCTTGGTTATCGTGTAACAATGCACAAGAATGCTGTGGA
GGTTCACAGGCGTACACTGTCAGTGTGGTGGGAAATATTGATGTTGCAAA
GCAAGTAAGTTCTAAACTCAATAGTATGAAATAGGTTGTTTACTTTTATG
GTGACCTTTTCCGATTTTAACAAATACTAACTAATTCCACCCTACAAAAC
TCGTGAGTTACAGTATCAACATAGCAGGgcgtctgaaaaataaaatgctt
ACTCACAAAAGTAGAAATTTTCACCAGATGGTATCCAAAGGttataaaaa
tcaaagaatggacattttctaaaatattattGGATAACTGAAGTCCACAT
GCAAATCGGCTTGGTGTCTTTTAAAGCGCTTTCTAAATTTCAGGTTTTGA
GAAGGATTGCCCATAAATGGCAAGTTAGCACTCATTATCGAAAACACATG
AGGAATTTTGTCAACAAACCACAGTTTAGACACGTAGAAGCTGATTGGTG
GAGGAGTTTTGATGTAAAAGGTTGGAGTAATTGTCCGGATGGAACCTACA
TGACTGGTGTTTGGCGTAATAACAATGATCAGGATAATGATGGCATCCAC
TTGATCGAACTGGCTGAATGTAAAAGCGCTGCTGCCCATCTGTTTTCGGG
TGAGTTGTCttattttacacatttttttggGAGAACATCCGGAATTTTTG
AAACCgtcggatattcttaactttttgggtttgaactctaaaaatgttcc
taaaaCATGTTAAGTTTGTATTTTGGTGTGTTTTCCTAAAAAGAAGCCGG
GTTTTGAGACCTCAAAGCCATTGGATGTTCATAAACAAGTTATGAAAGGC
GTGAAAAACAATTGCCGTCTGCTTGATAATTTCATAACTTCATGCGAGAT
ttggagagttccgatttataATATAGATAATTCGGAAATGCCAACTTATA
ACGTATGATTATGATATTTCTTTTTAACTCCCCGTTAATTAATTGTCTCG
CTTGTCTTTTTCAGCTGGAAAGGGTGATCAAGACTGTTACAAACTCAACA
TCTGGAAAACATGGGACAGTAGAAACTGGGCCACCTGCAAAGCTGGTTAT
TACATGTCGGGAATTTACAATACTGAAGGACATCGTTTGCATAATATCGA
AGAATTCCACTGCTGTCGACCAAAATCGCAACACAAAAGCTGGGGAAGTT
GCTACAACCACGATGCATGGGCCTCCTTGAATGATAAAGGTTGGACAAAA
TGTAACAACGGCTATTATATGGTTGGTATGTATCGGAATGACTGCAATAA
TTTGTGGTGTATTGAGGAATTCAAATGTTGTCAAATGGGAAGTTATAATC
AAGATTCGTACGTCGATAAACCGATCATCACCatcaaggtaaaaaaaaaa
tgcttTATGTGATTGCTATGGGAACCCatgcttttttttctttaccCTTT
GAATTTTGGATCTTGAAAGTTTCTAAGTTAGGTATTGCAGTGTGTGCATG
ACAGGTTGATTAATAATTAAATGCCATCTTCAGacacaaactttcgcgag
cagaaatttCCTCACATTAATGAATTTgaggaaaacaaatttttcacaaG
CACAAGACtttcgtgaatcgttggataaatatcatgaatttcaaaaaaaa
ttgacttaaaaaggACATTTTCGTCCAGGCTAAAAAATATTGCTTAAGAA
TGTGCTAAATGTTTGTTATTTAAACTTTATCACAAATTCGAATTTTTAcg
attaattttaattttttaaagaaattttgaattgtcCGTCCTGTCACACA
CACGATGATTCTAAGAAGCCatctttttctttcctttctcaACCAGACTA
TGGGAACAGATGGTCGACTTAAAGAATGCACCATGGATGCCATGGATAAA
ACTCCAGAAAGCAAGACCTATTCTTGTAAAGCTGTATCGTCAcgtcaaaa
cattttgaaattagatGCTGTCGAGTTCAAAGTCGAAGATAAGACACAAC
CTACAACAGCAAAACCCGAACgcgtcaaaaacttcaaaccagTCATCTGT
TCTGCTTCTAACAACGCCTACACTTGCaccaaaacattaaaaacagcCAT
CGAGACAACCACAAGTCTGGTGATTGGAACAGGTTTTGAGATGGGCGTTT
CCGTTAGTAACACAGTTGGAGTTTCAGTTGAAGCCTTTGGCGTCAGTGCT
TCATCAGAGTTCTCAGTTCAAGTTTCTGCATCAACTTCTTTCAACGTCGA
AAGAACTAAATCGAAAACCATTACCGTTGAAGACGAAACAAAAGTTGATG
TCAAAGTCGCTGCCCACAAACAAATCATGATTGACCTCCTTCGCAAGAAA
GTGGATATCATCTATAAATGGAAAGGTATTTTCCGCCTTCTTGGTAAATA
CAAGCTCTCTTGGAGTAATGGTGATCAAACTACACAGGATATCACTACAG
TCTTGTCTGGTACGAACCGAGACATGTATGCTTTTGGCACCTGGAATTAC
CCTGGTACCGACGTCCTTCAAGTTTTGGTGACTGATCAATACGGTAACAA
GAAGACTGAATGTCAACACAAAACTGGATCTAAAAAAGACTGTTCCGTAG
CAGGACTCTGACAACTTTTCTGAGTTTCAAAATACACTTAAACTTTTGGT
TTATGTTCCAGTTACTTTAACCCTTATAGGTATATTTTACTTAGCTCGTA
AATTGTAATCTTTAGTTAATGTCAAACTCGTATGAATATAAAtgtttttg
gtaaaattattcCGCTAATAAATCATCAATTCTGAGGAGTTAACCCCTTT
CAAGCGTACGAGATCGAAAGATTTTTGCGAttctttaaataaattttcag
gaATTTCTAGGTCCACAAATACTTCAAAGTACTTCAAATACTTCAAAAGA
ATGAACAAACTTCTAGAACTCTCTGATGCGATACATGTGTAAAACTTGGT
TCTGATACATTGCTATTGAAGGAGATTTGTTTTAAgatttatcttttttg
aaccAAGTTAAAGCCCTGCAAAGTAGGCAAAATGATCTTTCGTTGAAAGA
AAGCTCAGGGGCGGTACAGCCGCATGGTTCTAAACCCACAGGGTACTAAC
CCTCATTTCAGGGAAATTCGTTTTAGGTACCACAATCCCCTTTTTAGTAT
CGGATACTAATTTTTTTGAGTCAATTTTACctcaccaaaatttgaaaaag
ctcAGCAAActctggaaaaaaaattgaaaattagtaGATGagtgaaacaa
aaaatatttccgtTAAATGAAGTTTAATTTTTGTCGGAAAACTAGGCTAA
TTTCTGATTTCCCAATATTGGTAAACATTTACCAATTACTCCCACGTAAT
ACCAAATTTTAGCACCGGGTACTAGCTTGAAATGGGTGAAATACTCACCC
ACAAATGAAGTACCATCTTTTTTTAGATTCATTGTTAgt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061615TCONS_00061615Clytia hemisphaericatranscript
TCONS_00061616TCONS_00061616Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Unknown secreted proteinTCONS_00061615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1043652..1047840 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2994.85	2951.63	1597.9	1304.38	3.47	3.32	0.54	0.55	0.14	1.22	0	0.18	0.38	0.1	0.02	0.09	22.93	16.91	0.14	0.06	27.87	29.88	1003.59	820.53	3.15	2.64	117.16	93.48	560.07	673.72