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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061435 ID=TCONS_00061435|Name=TCONS_00061435|organism=Clytia hemisphaerica|type=transcript|length=1614bp
tcagtgtaaaaaaatacaacaaataaaacaattatACAATAGAAGTATTA
ACagagacaaaattttaaaacatgtaTTCTGGTTCTTCATTGGTCGATTT
GAAAGCTGAATTATCGAGAAAAGAAGAAGAGTTTGGGAAATTGAGAACAG
GTGATGAAAAATCCAAGCGTGGAAGTAGTAATAAGACTTTTCAAAAgATC
CATACCATAACAAAATCtaagaaaacgaagaaaaataaagttgGTGATTG
GAAAGATAGTGACGATGAAAAGGAAACTGAAGAATCTTCTAAAGGCAAAC
AAATGTCtgatgaaatgaaagaaatgtaTGCGAAATCACAACAGAAGATG
TTAGCCAAAGCCAAGATTTATGAGAAAATGCAAAAAGGCGAAATGGAAGA
TATTCAAGATTTCAAAGGAGAAACTCGATATCTGGtcgattttgaacaaa
aatatataGATAGTGATGATATACCTACCAGTACATCTGGTTCCCAAGAC
AATATAAACCGGTCCTTACCAAGAAATGACAATGCAGATGGGGTCTCTTC
ATCACAGGCAGACTTTGAGAAGGAGGAGGCAAGGCGCCAAAGAGTCTCTG
AGGATATTTATGCAGCGGATATAGACTATGTAGACCAATTGCATGAAAAA
TGGCGGCAATGGCAGGACGATTTGCTTGACGGACCTGTACATTATGAGAA
CGTTAAATTTGATGAGATACGCAACCTGGGTACGAGTTATTTTGCTTTTT
CGAGAGACGAAGAAGAAAGGAAGCGGCAAATAGAAGATTTCCGGAAAATG
AGAGAAGAAACTAAATCTGTGATCAAGAAAAAGGAAGCGTTACAAAACAA
ACGAAAAGCAGCTCTCGACGCTAGACTGGAGAAAGTGAAACGTCGTAAAG
CCGAAGACGAAGGTAGGCTAGATGAATATTTAAAAGAACTAGCCGCTAAA
GAACAAGCGGAAAAGGAAATTGCCGAGGCTAAAGAAGTGAGTGAAAAGAC
TGAAGATGAAGGTGATGTTGAAACGACAAAAGATGCGACGGACTATTTTA
TCAAACAATTACGTAAACAATCTACTAAAAAGAGAGACTGGGACCAAGGG
AAACATGATAATTTTGTTGGACAAGCCTTTGTTAAAAGTGGTGTACAACA
ACGGACAGGGTTATCTGCTAATGCGGATAGACCTTCTTCTACGGGTTCTG
GTTCAGCTACAATGACATCACAGACTACTAAAAAAGAACCAAGTtatgaa
aagaagattgaaaacaTAAGGAAAGAAAGACCTGAAGAATTTGCGCCGCc
tagtttttattaaaaaaatgttttgttttttattctcaaaaagttacaaa
acaTGAGAAATAATATTCGTCTAAAAAAGTTGGTTGGCATTTTGGTTTTT
GATTGAAACTGAATTTTAGGTTTTACCTGGACACAACAACGATTTTATCA
TTTCAACCGAACTGAGATTGTAACTTTACTTCACCCCAAAGTTGTAATTA
GGCCCCTTTTTTACTTGATGTTTATCAAATCTTTCGAAACTCACAGTGAT
TTTGATTGAATTAAtggtctagcatgctagacgctTGATTCAGACATTGa
gataaaaaatgaac Run BLAST on NCBI protein sequence of TCONS_00061435-protein >TCONS_00061435-protein ID=TCONS_00061435-protein|Name=TCONS_00061435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=413bp
MYSGSSLVDLKAELSRKEEEFGKLRTGDEKSKRGSSNKTFQKIHTITKSK
KTKKNKVGDWKDSDDEKETEESSKGKQMSDEMKEMYAKSQQKMLAKAKIY
EKMQKGEMEDIQDFKGETRYLVDFEQKYIDSDDIPTSTSGSQDNINRSLP
RNDNADGVSSSQADFEKEEARRQRVSEDIYAADIDYVDQLHEKWRQWQDD
LLDGPVHYENVKFDEIRNLGTSYFAFSRDEEERKRQIEDFRKMREETKSV
IKKKEALQNKRKAALDARLEKVKRRKAEDEGRLDEYLKELAAKEQAEKEI
AEAKEVSEKTEDEGDVETTKDATDYFIKQLRKQSTKKRDWDQGKHDNFVG
QAFVKSGVQQRTGLSANADRPSSTGSGSATMTSQTTKKEPSYEKKIENIR
KERPEEFAPPSFY Run BLAST on NCBI transcript from alignment at scaffold_358:394400..398738- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061435 ID=TCONS_00061435|Name=TCONS_00061435|organism=Clytia hemisphaerica|type=transcript|length=4339bp|location=Sequence derived from alignment at scaffold_358:394400..398738- (Clytia hemisphaerica)
TCAGTGTAAAAAAATACAACAAATAAAACAATTATACAATAGAAGTATTA
ACAGAGACAAAATTTTAAAACATGTATTCTGGTTCTTCATTGGTCGATTT
GAAAGCTGAATTATCGAGAAAAGAAGAAGAGTTTGGGAAATTGAGAACAG
GTGATGAAAAATCCAAGCGTGGAAGTAGTAATAAGACTTTTCAAAAGGTA
ATAATATTTTTCAAATGAGAGCGGTAATGTTTTTCAATTCTATGAGAGCT
AGGGTCAAAATATATATTTTTTAATTTTACAATTTTCCTGAGATTCAGTT
AGGTGTTGGTACCTTGTACCAAGTTGAAGACCAAAAAGTCAAAAATTGCT
TTAGCCCATGCACATGTACATGCAGCACATTTTACAAAAGACTGAAGTAC
ATACTTTTTTATATTAGAGCCCATAGTACGGATCCGTGGGAGATGACACC
TTCCGAAAAAGTTGAAAAAGGGGGAACAGAAATTTTCAAGAAAAAAGGGC
GGGGGGATAGCAAGAAAGGGCGGGAGGGGTAGTCTAAGAAAGCGGCTTAC
TCTTGTCTCACGAATAGACGTCCCCCCGCTAATTCTTAAAAGAAAAAAAA
TCCATCACCCCCGCTCTTTTTAACCCCCCCCTAATTAAATTGGAATAATT
CAATACTTTATTACAGTGTAGATAGACCTTAAACTTGTTAAAATTTTCCA
TTTTGTTAGTATTGGTTCTTATTTTACGTGTTCATTCTGGTTCATTTGTT
AAATTTTCTTTTTTGTTGTTGAAATTGATCTCAATTAAAAAAAATTCTGT
CTTCAAACCCCCCTCTTATTCCATCCCCCCCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTATTTTCA
AGCACTGTTATGAAATTTGGTCTTCATGAAAGAAAGTTTTCTGTTATAAT
CTGAGCCAAAAAAAAGAAAGAAGTTTATTATTTCGCTTTCTCTCTCTAAA
GATATTTCACATATATTTGCTAGCCATTTTTGTCGAAAATCCTTGGGGGC
AGGCATTTTTAAAGGTTGGGGGATGCCAAACAGGGGGGGTCATTTAAGAA
GCACTATGGAGCCCTATTTATAAGAACATTTAGGTTAACTTTTTGTGAAA
AAAACCCAAGATAAGTCTGTCTGTTCTAACTAATTTTTTAAGAACACCAA
TAACAGCATACTTTTTAGGCTTAAAATTATCAAAAAAATAAGCACATCGA
GATAAGGATTAATATCAAGATTAAGATGTTATCCAAATTAAGACGTTGTA
AGAAAAAAATGTATAATTATTCAATTGTCGTATTCCTTTTTAGATCCATA
CCATAACAAAATCTAAGAAAACGAAGAAAAATAAAGTTGGTGATTGGAAA
GATAGTGACGATGAAAAGGAAACTGAAGAATCTTCTAAAGGCAAACAAAT
GTCTGATGAAATGAAAGAAATGTATGCGAAATCACAACAGAAGATGTTAG
CCAAAGCCAAGATTTATGAGAAAATGCAAAAAGGTTTGTCAGGATGGACT
AGTGATTCTCAAAAACCTTGAGATGTCCCTCTGATATTTCTCTTGTCTAT
TTGGAGGATATCTTTCCCGAAGCCCTTGAAATACTTTTAGTCGGTATAAA
AAATCACAGCAGAAGATATTAGCCAAAGCCAAGATATATGAGAATTAATG
CAAAAAGGTTTGTCAGGATGGGCTATTGATTCTCAAAAACCTCAAGATGC
CCCTCTGATATTTCTCTTGTATATTTGGAGGATTTCTTTCTCGAAGCCTT
TGAAATACTATTAACTGGTATGCAAAATCACAAAAAAGGATGGCTAACGC
TAAGATCTATGAGAAAATGCAAAATGTTTTTACAAGATGAACTATTGACT
CTCAAAATGTGTACCTCTTATAATTATATTGCCCATTTGGGGAAACTTTT
TGTCAAAGCCCTTGAAATTTTATGATCTGGTATGCAAAACCACAGCAGAA
GCCAAGATTTATGAGAGTTAATGCAAAAAAAATTTAAAAGATGAACTAGT
GACCCTCTTATATTTCCATTGTCCATCTAAGAGTCTAGGGAATTTCCAAA
CGAGAAGCTTTGACAATTAGCAGGATCAGCAACTAACTAAAATCTCGAGA
AATTTTTCTCTATTTTTTAAACTTTTACAGATTTTTTCTGGTTGTCAAAT
CTTATCTTAAAAAAAGCGGAAGTTTTTACTTTTTATCGAATTCAATTCTC
CATTTTTCCCACTAAAGTTAACTTTTGATTGGTTAGAATTATAGAAAAAA
AGTTGTTAACCTTGCATTATTATACGATACAAGACTTGATTCTTGTCTGA
GTTCGATTCAGTACTGGTTCGATTCCTGTAATGTCTGAACATGGTCTCAG
TGCTGTGATTCACTTGGCAAGTGAATGTACCTTTGACTGGGTCAACCAGG
GATTTTTCTAAGCACTTTGAGCTGAGGCCGTTTTTGTTAACTTAAATTGA
ATTTCTAATATGCCGGAAAAGGAACTTGCTCAGCAAAGCTGTACATTGAT
GAAGCTGGGGGTCTTGTGGTTGTTCAGAAGGCGAAGCTTCTAAAAACTCT
TGAATATGTAGATATTAATTAGTTATTGTTGCTCATAAACAGCAAAAAAT
GTTAATTTCGCTAGAAAAAATTTATTTTGGATTGAGTTTCAAAAACTCGA
CCTTAGATTGAGTATTTTGGCTGGTATACGTACATACGTAAAAGTGCTTA
GAAAAATCCCTGGTCAACCCATGCCATCTGAGGAGAGTTGGGAGGATAAA
CGGGATTACAAGGATGCACTGTCCTCCCGACTCGTCTGAATATATATACA
CTTTTGCGTGTCGCGAGCTCGAGTTGAGCGCAATGATTTTCCATTCATCG
TCTCTCTCTTTATGAAATATTTTTTACCAAATGAATTTGTATTTAAAAAA
CTTTGATTTCAGGCGAAATGGAAGATATTCAAGATTTCAAAGGAGAAACT
CGATATCTGGTCGATTTTGAACAAAAATATATAGATAGTGATGATATACC
TACCAGTACATCTGGTTCCCAAGACAATATAAACCGGTCCTTACCAAGAA
ATGACAATGCAGATGGGGTCTCTTCATCACAGGCAGACTTTGAGAAGGAG
GAGGCAAGGCGCCAAAGAGTCTCTGAGGATATTTATGCAGCGGATATAGA
CTATGTAGACCAATTGCATGAAAAATGGCGGCAATGGCAGGACGATTTGC
TTGACGGACCTGTACATTATGAGAACGTTAAATTTGATGAGATACGCAAC
CTGGGTACGAGTTATTTTGCTTTTTCGAGAGACGAAGAAGAAAGGAAGCG
GCAAATAGAAGATTTCCGGAAAATGAGAGAAGAAACTAAATCTGTGATCA
AGAAAAAGGAAGCGTTACAAAACAAACGAAAAGCAGCTCTCGACGCTAGA
CTGGAGAAAGTGAAACGTCGTAAAGCCGAAGACGAAGGTAGGCTAGATGA
ATATTTAAAAGAACTAGCCGCTAAAGAACAAGCGGAAAAGGAAATTGCCG
AGGCTAAAGAAGTGAGTGAAAAGACTGAAGATGAAGGTGATGTTGAAACG
ACAAAAGATGCGACGGACTATTTTATCAAACAATTACGTAAACAATCTAC
TAAAAAGAGAGACTGGGACCAAGGGAAACATGATAATTTTGTTGGACAAG
CCTTTGTTAAAAGTGGTGTACAACAACGGACAGGGTTATCTGCTAATGCG
GATAGACCTTCTTCTACGGGTTCTGGTTCAGCTACAATGACATCACAGAC
TACTAAAAAAGAACCAAGTTATGAAAAGAAGATTGAAAACATAAGGAAAG
AAAGACCTGAAGAATTTGCGCCGCCTAGTTTTTATTAAAAAAATGTTTTG
TTTTTTATTCTCAAAAAGTTACAAAACATGAGAAATAATATTCGTCTAAA
AAAGTTGGTTGGCATTTTGGTTTTTGATTGAAACTGAATTTTAGGTTTTA
CCTGGACACAACAACGATTTTATCATTTCAACCGAACTGAGATTGTAACT
TTACTTCACCCCAAAGTTGTAATTAGGCCCCTTTTTTACTTGATGTTTAT
CAAATCTTTCGAAACTCACAGTGATTTTGATTGAATTAATGGTCTAGCAT
GCTAGACGCTTGATTCAGACATTGAGATAAAAAATGAAC Coding sequence (CDS) from alignment at scaffold_358:394400..398738- >TCONS_00061435 ID=TCONS_00061435|Name=TCONS_00061435|organism=Clytia hemisphaerica|type=CDS|length=3726bp|location=Sequence derived from alignment at scaffold_358:394400..398738- (Clytia hemisphaerica)
GCGAAATGGAAGATATTCAAGATTTCAAAGGAGAAACTCGATATCTGGTC
GATTTTGAACAAAAATATATAGATAGTGATGATATACCTACCAGTACATC
TGGTTCCCAAGACAATATAAACCGGTCCTTACCAAGAAATGACAATGCAG
ATGGGGTCTCTTCATCACAGGCAGACTTTGAGAAGGAGGAGGCAAGGCGC
CAAAGAGTCTCTGAGGATATTTATGCAGCGGATATAGACTATGTAGACCA
ATTGCATGAAAAATGGCGGCAATGGCAGGACGATTTGCTTGACGGACCTG
TACATTATGAGAACGTTAAATTTGATGAGATACGCAACCTGGGTACGAGT
TATTTTGCTTTTTCGAGAGACGAAGAAGAAAGGAAGCGGCAAATAGAAGA
TTTCCGGAAAATGAGAGAAGAAACTAAATCTGTGATCAAGAAAAAGGAAG
CGTTACAAAACAAACGAAAAGCAGCTCTCGACGCTAGACTGGAGAAAGTG
AAACGTCGTAAAGCCGAAGACGAAGGTAGGCTAGATGAATATTTAAAAGA
ACTAGCCGCTAAAGAACAAGCGGAAAAGGAAATTGCCGAGGCTAAAGAAG
TGAGTGAAAAGACTGAAGATGAAGGTGATGTTGAAACGACAAAAGATGCG
ACGGACTATTTTATCAAACAATTACGTAAACAATCTACTAAAAAGAGAGA
CTGGGACCAAGGGAAACATGATAATTTTGTTGGACAAGCCTTTGTTAAAA
GTGGTGTACAACAACGGACAGGGTTATCTGCTAATGCGGATAGACCTTCT
TCTACGGGTTCTGGTTCAGCTACAATGACATCACAGACTACTAAAAAAGA
ACCAAGTTATGAAAAGAAGATTGAAAACATAAGGAAAGAAAGACCTGAAG
AATTTGCGCCGCCTAGTTTTTATTAAATCCATACCATAACAAAATCTAAG
AAAACGAAGAAAAATAAAGTTGGTGATTGGAAAGATAGTGACGATGAAAA
GGAAACTGAAGAATCTTCTAAAGGCAAACAAATGTCTGATGAAATGAAAG
AAATGTATGCGAAATCACAACAGAAGATGTTAGCCAAAGCCAAGATTTAT
GAGAAAATGCAAAAAGATGTATTCTGGTTCTTCATTGGTCGATTTGAAAG
CTGAATTATCGAGAAAAGAAGAAGAGTTTGGGAAATTGAGAACAGGTGAT
GAAAAATCCAAGCGTGGAAGTAGTAATAAGACTTTTCAAAAGGCGAAATG
GAAGATATTCAAGATTTCAAAGGAGAAACTCGATATCTGGTCGATTTTGA
ACAAAAATATATAGATAGTGATGATATACCTACCAGTACATCTGGTTCCC
AAGACAATATAAACCGGTCCTTACCAAGAAATGACAATGCAGATGGGGTC
TCTTCATCACAGGCAGACTTTGAGAAGGAGGAGGCAAGGCGCCAAAGAGT
CTCTGAGGATATTTATGCAGCGGATATAGACTATGTAGACCAATTGCATG
AAAAATGGCGGCAATGGCAGGACGATTTGCTTGACGGACCTGTACATTAT
GAGAACGTTAAATTTGATGAGATACGCAACCTGGGTACGAGTTATTTTGC
TTTTTCGAGAGACGAAGAAGAAAGGAAGCGGCAAATAGAAGATTTCCGGA
AAATGAGAGAAGAAACTAAATCTGTGATCAAGAAAAAGGAAGCGTTACAA
AACAAACGAAAAGCAGCTCTCGACGCTAGACTGGAGAAAGTGAAACGTCG
TAAAGCCGAAGACGAAGGTAGGCTAGATGAATATTTAAAAGAACTAGCCG
CTAAAGAACAAGCGGAAAAGGAAATTGCCGAGGCTAAAGAAGTGAGTGAA
AAGACTGAAGATGAAGGTGATGTTGAAACGACAAAAGATGCGACGGACTA
TTTTATCAAACAATTACGTAAACAATCTACTAAAAAGAGAGACTGGGACC
AAGGGAAACATGATAATTTTGTTGGACAAGCCTTTGTTAAAAGTGGTGTA
CAACAACGGACAGGGTTATCTGCTAATGCGGATAGACCTTCTTCTACGGG
TTCTGGTTCAGCTACAATGACATCACAGACTACTAAAAAAGAACCAAGTT
ATGAAAAGAAGATTGAAAACATAAGGAAAGAAAGACCTGAAGAATTTGCG
CCGCCTAGTTTTTATTAAATCCATACCATAACAAAATCTAAGAAAACGAA
GAAAAATAAAGTTGGTGATTGGAAAGATAGTGACGATGAAAAGGAAACTG
AAGAATCTTCTAAAGGCAAACAAATGTCTGATGAAATGAAAGAAATGTAT
GCGAAATCACAACAGAAGATGTTAGCCAAAGCCAAGATTTATGAGAAAAT
GCAAAAAGATGTATTCTGGTTCTTCATTGGTCGATTTGAAAGCTGAATTA
TCGAGAAAAGAAGAAGAGTTTGGGAAATTGAGAACAGGTGATGAAAAATC
CAAGCGTGGAAGTAGTAATAAGACTTTTCAAAAGGCGAAATGGAAGATAT
TCAAGATTTCAAAGGAGAAACTCGATATCTGGTCGATTTTGAACAAAAAT
ATATAGATAGTGATGATATACCTACCAGTACATCTGGTTCCCAAGACAAT
ATAAACCGGTCCTTACCAAGAAATGACAATGCAGATGGGGTCTCTTCATC
ACAGGCAGACTTTGAGAAGGAGGAGGCAAGGCGCCAAAGAGTCTCTGAGG
ATATTTATGCAGCGGATATAGACTATGTAGACCAATTGCATGAAAAATGG
CGGCAATGGCAGGACGATTTGCTTGACGGACCTGTACATTATGAGAACGT
TAAATTTGATGAGATACGCAACCTGGGTACGAGTTATTTTGCTTTTTCGA
GAGACGAAGAAGAAAGGAAGCGGCAAATAGAAGATTTCCGGAAAATGAGA
GAAGAAACTAAATCTGTGATCAAGAAAAAGGAAGCGTTACAAAACAAACG
AAAAGCAGCTCTCGACGCTAGACTGGAGAAAGTGAAACGTCGTAAAGCCG
AAGACGAAGGTAGGCTAGATGAATATTTAAAAGAACTAGCCGCTAAAGAA
CAAGCGGAAAAGGAAATTGCCGAGGCTAAAGAAGTGAGTGAAAAGACTGA
AGATGAAGGTGATGTTGAAACGACAAAAGATGCGACGGACTATTTTATCA
AACAATTACGTAAACAATCTACTAAAAAGAGAGACTGGGACCAAGGGAAA
CATGATAATTTTGTTGGACAAGCCTTTGTTAAAAGTGGTGTACAACAACG
GACAGGGTTATCTGCTAATGCGGATAGACCTTCTTCTACGGGTTCTGGTT
CAGCTACAATGACATCACAGACTACTAAAAAAGAACCAAGTTATGAAAAG
AAGATTGAAAACATAAGGAAAGAAAGACCTGAAGAATTTGCGCCGCCTAG
TTTTTATTAAATCCATACCATAACAAAATCTAAGAAAACGAAGAAAAATA
AAGTTGGTGATTGGAAAGATAGTGACGATGAAAAGGAAACTGAAGAATCT
TCTAAAGGCAAACAAATGTCTGATGAAATGAAAGAAATGTATGCGAAATC
ACAACAGAAGATGTTAGCCAAAGCCAAGATTTATGAGAAAATGCAAAAAG
ATGTATTCTGGTTCTTCATTGGTCGATTTGAAAGCTGAATTATCGAGAAA
AGAAGAAGAGTTTGGGAAATTGAGAACAGGTGATGAAAAATCCAAGCGTG
GAAGTAGTAATAAGACTTTTCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061435-exon-scaffold_358-1575043694:398542..398738 | TCONS_00061435-exon-scaffold_358-1575043694:398542..398738 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1575043694:397056..397245 | TCONS_00061435-exon-scaffold_358-1575043694:397056..397245 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1575043694:394400..395626 | TCONS_00061435-exon-scaffold_358-1575043694:394400..395626 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1510915933:398542..398738 | TCONS_00061435-exon-scaffold_358-1510915933:398542..398738 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1510915933:397056..397245 | TCONS_00061435-exon-scaffold_358-1510915933:397056..397245 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1510915933:394400..395626 | TCONS_00061435-exon-scaffold_358-1510915933:394400..395626 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1491911889:398542..398738 | TCONS_00061435-exon-scaffold_358-1491911889:398542..398738 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1491911889:397056..397245 | TCONS_00061435-exon-scaffold_358-1491911889:397056..397245 | Clytia hemisphaerica | exon |
| TCONS_00061435-exon-scaffold_358-1491911889:394400..395626 | TCONS_00061435-exon-scaffold_358-1491911889:394400..395626 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:394400..398738 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR025066 | DUF4078 |
Blast
BLAST of TCONS_00061435 vs. Swiss-Prot (Human)
Match: CC174 (Coiled-coil domain-containing protein 174 OS=Homo sapiens GN=CCDC174 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.835e-22 Identity = 97/322 (30.12%), Postives = 143/322 (44.41%), Query Frame = 3
Query: 78 SGSSLVDLKAELSRKEEEFGKLRTGDEKSKRGSSNKTFQXXXXXXXXXXXXXXXVGDWXXXXXXXXXXXXXXGKQMSDEMKEMYAKSQQKMLAKAKIYEKMQKGEMEDIQDFKGETRYLVDFEQKYIDSDDIPTSTSGSQDNINRSLPRNDNADGVSSSQADFEKEEARRQRVSEDIYAADIDYVDQLHEKWRQWQDDLLD------------------------------------------------GPVHYENVKFDEIRNLGTSYFAFSRDEEERKRQIEDFRKMREETKSVIKKKEALQNKRKAALDARLEKVKRRK 899
+ SSLVDLKAEL RK+EEF + + + G T +K W + +Q +E K + K+++K+ KAK+YEKM KG D D + E YLVDF QK ID SG+ + ++ R+D+ + + E E Q SE+ +DYVD L R + DL D GPVHYE+++ +E R LG YFAF+RD+E R +Q++ +RE+T K+E ++ KRKA L+ARL K++++K
Sbjct: 11 TASSLVDLKAELFRKQEEFKQEKLLKDSGVFGKPKTTNKKPSI--------------WSKQNVGVSNRAEKDAEQKIEEQKTL-DKAREKLEEKAKLYEKMTKG---DFIDEEVEDMYLVDFTQKIIDKRKE-MEASGAHRDSQKAGERDDDEENLP------EGEIPPPQDPSEEW----VDYVDSLGRSRRCMRKDLPDLLEMDKNLQGRLFISPANEKTLLSEDMRKELQRQQWEEEEREALKRPMGPVHYEDIRENEARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRTKRENIKEKRKAILEARLAKLRQKK 303
The following BLAST results are available for this feature:
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