TCONS_00061425 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061425
Unique NameTCONS_00061425
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2545

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061425 ID=TCONS_00061425|Name=TCONS_00061425|organism=Clytia hemisphaerica|type=transcript|length=2545bp
CAAAATCACTTCATCAAGTATGGCTTTCGTCGTTAAATTGGCTACCATTT
TTCTTTGGTTGTTGCTAAGCAACGTATGGACACAGTACATAAACGAATTT
GACGAAGAACTTCGATTTGAATGTCCAAAGAATCAATATATCAGTGAAAT
CGGCAGCAAACATCAAAATGCTGAAGAAGACAGACAATGGAAATATACTT
GTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTCAGTAGATTATGTT
AATAATTATGACCAAATCATGGATTGGAAATGTGCTCAAAATGGACTTGT
TGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAAGATCGAATCTGGA
AATTTAAATGTTGCCAgaCGCCAGATTCAAATGAAGGTTGTCAAAATATA
ACGATGAATGAATTTGATGAATTTATGGATTTCATTGTACCACGTGGTCA
TGCCATTATTGGTTTCCACAGTATCCATAGCAACAAAAGAGAAGATCGAA
AATGGAGAGCTAATGTTTGTAAATTTGCTAAATGCCAAGCTATAAGAATG
AGAGTATTATCTACAATCAAACCACGGCAAGAACAAATTAAAATTATCGG
TATAGCAACATCTCAAGGTTGTTCCAATAAAGCTTCATTCCAAACAAAGC
TGGAGAATACGGATTCGGTTATTGAGACTTCAGCTTTTACCACAGAGAAA
GGGACTTCGTTTACTTTTGGTAGGACCTTATCAGTGGAGGTATCAGGTAC
TATTGGTTTCCTTGGTAGTGGGGTGGATGTATCTGTTGGACTGCAAACGA
CTTTTGAGAACACATGGCATTGGTCATCATCAAAAACTAAAGAAACATCT
CTCAAAACGTCCAGTTCAGCCTCGCAGTCACTTGGATataaagGACCTGG
AGCAGCGTTGATCATAGGATATGTCACATATTACAGATATGAAAATACAG
ATGTGGACGTTGAGTACGACATAACATGTGACAACGGTCAACATCGAAAA
CAACGCTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAACACATTT
TGTTCAAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGACTATGGAA
GTAATGATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGCGCCAAAT
AAACTTATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATATGAAGCC
GACAAAACCAACGACTGCGACAACGACTACGTCAAGACCGACAAAAATAC
GACATGATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACTAAAACCA
CGTTGGAAAGATAACAATAAAGACAACATTTTCACTGGATCTGCAGTCAC
CGTCAATCATGTAATCTTAAACAATATTAAATTTATAGTTTCAATTTTAC
TCTCCATTAGTATAATTTTTATGTAGCAAGTTATATTCGAAGAGCAGGCA
ATATACGTTCTTTTCTAACTATGTGTATACGGTGCTAGTGATTGTAGATA
CCGTTAATACGCTGGCTAGGCCTTCAAAAATATCTACCCTTGCTATGAGC
TTTTTTGAGTGCATCCATTTCGATGCATAGGCAAAGGAGGGCTATTATTC
ATCGatattatatgtgttaaataataattttataagaaagggcattttag
aatttatttcaaaatgcatttcGAAGTATAATTGAATTACGCGAGCGATA
TCGAGCAAAAAGCAAAACACGATACTTCTTACGCTAACATTTCACGCAAA
ATTTTAtgatagaatatagttgaaaCATTGGCATTACTatatatttacta
ttttttccATTCCCCAGCCATGAAAGATGGCATAGAATATCAATTCCCAT
CGGGTTTCAGTCCattaatttcatccccactggtagaaaaaaatcctacc
gggtctgtgaaaagggggtgtaTAATTACTAGGAGAAAGTCAATGCAAGA
AATTCATACATTTGCCAAGCGTACTTTGTAAACTCTGACCCAATCTCCTT
AGGGTTTAATGATAGTAGATGTATTATCAGGTTTCTCttaagcccggggg
gggggcactcatatttTCCGACCAACGGCATGTGCCATCTTTAAGAGTAG
GTATTTCAAGACtctcgaaatgcactgtaagggtgtacttttgatagagt
gcactacaaAGGGTCTTCTTTTTAGGTGAATACACTGTAatggtgtgttt
ggggactgCTGAATTGCAAGTCTGACAGCAAGAATCTTTATAGTTTGGCt
cgcacccattttgatttgttttgcacttTGTCTCGACATCCCGGGCTCAT
TTTTAGATGGCGTCaccaaaataagatatgaaatcaaactacactgtaag
ggtcagaaacgtttGGTAGATGCACTGTTAAGGGTATCCTTTCACTGCTC
AAGAGattcactgtaagggtccgattctGAAAGCCATTTCTTTGGCGGCA
CTTGCCGTAGTTTAAAAATCGAGTGCTTCGTTCTTAAAATCaatcagaga
aaaaaaaaatctaaatttgtgTCAGAATCCGAGAATCAAATATCA
Run BLAST on NCBI

protein sequence of TCONS_00061425-protein

>TCONS_00061425-protein ID=TCONS_00061425-protein|Name=TCONS_00061425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
KITSSSMAFVVKLATIFLWLLLSNVWTQYINEFDEELRFECPKNQYISEI
GSKHQNAEEDRQWKYTCRSGLVNDQCDWSVDYVNNYDQIMDWKCAQNGLV
AGVRSIHSNEREDRIWKFKCCQTPDSNEGCQNITMNEFDEFMDFIVPRGH
AIIGFHSIHSNKREDRKWRANVCKFAKCQAIRMRVLSTIKPRQEQIKIIG
IATSQGCSNKASFQTKLENTDSVIETSAFTTEKGTSFTFGRTLSVEVSGT
IGFLGSGVDVSVGLQTTFENTWHWSSSKTKETSLKTSSSASQSLGYKGPG
AALIIGYVTYYRYENTDVDVEYDITCDNGQHRKQRSKASLKLDRYSQTHF
VQKHGAFYSKQNCDYGSNDCIRSLNGKKTLAPNKLISDFERCIEKANMKP
TKPTTATTTTSRPTKIRHDVLSDVTRDTVKLKPRWKDNNKDNIFTGSAVT
VNHVILNNIKFIVSILLSISIIFM
Run BLAST on NCBI

transcript from alignment at scaffold_358:242386..250375-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061425 ID=TCONS_00061425|Name=TCONS_00061425|organism=Clytia hemisphaerica|type=transcript|length=7990bp|location=Sequence derived from alignment at scaffold_358:242386..250375- (Clytia hemisphaerica)
CAAAATCACTTCATCAAGTATGGCTTTCGTCGTTAAATTGGCTACCATTT
TTCTTTGGTTGTTGCTAAGCAACGTATGGACACAGTACATAAACGAATTT
GACGAAGAACTTCGATTTGAATGTCCAAAGAATCAATATATCAGTGAAAT
CGGCAGTAAGTCAGTTTTATAAAAAACTTTGGTATTACTTTTTTCAAAGG
AATCTAGTGTCCGTGTAAACCTAGGCTTTACGTATCACTGAAATAGTTTT
TGTTTTAAAAATATTGGAGGGATTCTGGGAGCCAATTGTACAAGCCAATA
ATGGAGCCAATAATGTGGTAGCGGTTTTGTATCCCGATATTCTTCAAAAT
CCAATGAATTTATATGTTGGAAGGTTAAACACACACTTAGGAAAACCCAC
CAAAGGTTATTTTTTCCAGGTGTGTATTGGGCCATTCCATTTTATATCCA
AACAGGGGGTAATCAGAGAAGAATTTCCAGGGAGTATAAAAAAGTATTCT
TTCATTTTTCCAGGGGCCAAAAGATTGGTTTTAGTCCGTCCATTCTTACT
TTTAAGCTTTTAAGATATGAAAATAATTTTTTCAATGGGTTCTTTTGCAA
ATTTTGATACCAGGGGGTATTCACATATTTCTAAAAATCTTTCTTTGACT
TGAAAAGGTTCGTCCAGCCCCTGTATGGAAATTTTATGGAACAGTTCATT
AATTCTTCATTATATTTGTATCTTTTTTATTGATAAAATAAATAAAATCA
GGATTTATCTGTTTTCAGGCAAACATCAAAATGCTGAAGAAGACAGACAA
TGGAAATATACTTGTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTC
AGTAGATTATGTTAATAATTATGACCAAATCATGGATTGGAAATGTGCTC
AAAATGGACTTGTTGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAA
GATCGAATCTGGAAATTTAAATGTTGCCAGGTTACCCAGCTGGCACACAA
CGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTGAATGTTAGAA
AAACGTTGAAACAATGTTGTGTTCCAGCTGGGTAATAACTCGAACCTCTA
TTCTTTCTATAACTCGAATGTCTCCTTAACTCGAACAAGTTTTCTCGTCC
CTTCAGTTAACAATGCCTTATACAAATCTCCATAACTCGAAATTTCCGCA
ACTCAGAACTCGAACAAATATTTGGTTCCCATATATTTACGACTGTAGTA
GTAAACGTAAAAGTTTGAATTTAGGACACGTCTTTAGATTTAGCCTTTTT
CACAGGATTGGTGTTTCTAGTGTACAAATTTTGCACTGCAGTAATTATCT
TTAACGTCTTTTTCGTATGGTAGTTTGTACAGAATACACTTTTCTCGAGA
TGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGA
AATAATACATTTAAACCAATTTAAATTCCCAAAAGGCAAACATTAACTCT
AAAACAAAAGTACTTGAAATTCAAAATGTCTCATGAGGTGTAAACAACAC
AATTATCATTGTGAATATTTAATTTTATAGCAATGAAATCTGTTTGAAAA
CGAGGACAACAATAAATTTATGCATCTCGAGAAAAGTGTATTGAATTTAA
AATAGCCTGTAAATGATGCGCAAATCCTATGAAATAGAGGTGCAGGTTAG
TAATACACGGGTTGCAAAATTATTTTAATGCAGTCAAAACATGTGATTAC
TCGAAAGAGTTCACGTGATTTTATTCCCCGGTTTTATTCCCATATTACTT
GCTTTACAACTTACAGCTGAAGTAAATCTCATGTAGCAAGCACATAAAAA
CTTCGAGACTTTAATTTTGCAGCCTGTGTATTCCAATCTCTCTGTAACTC
AAATGACCTACAAATGAATCCTGCATCATGATACACATGCGTAATTTGGC
GTTCTTTATTCATATTCAAAGAGGAATCAAAATATTTAAAACTTATCATA
TTCTTTTTCTCTATCTTTAGTCCGGGGGGAGGGGGTACTTAGGCAAGTGA
AGGGTACGGGTATGTGCCGCCCTTAAGGGTGCCTTTTTTGGGAAAATTAA
ATTTCCGTACCACTAAGAGTCGGAAAAATAGGAAAATTTTCCTATTTTTT
CTCTTTTTTAGTCCCGCTACGAGTCCGAAGGTCGAAAGTCGGGCGGCACA
TACCCGTCAGCTCACCACCCTAGTACCTCCCCCGGATCTTTAGTAGATGC
AGGATTCTTAAGATTTACTCCCTCCTAGCAAACTAATTCTAGTATCTGTC
AGTTAATATATTGGCAGTGGAGTAAAAAGTTAGCTCTTTTCATAGTTCTG
AACCCCTCTCCCCTTAAATCAATATGTTATAGACCGACCCATGCCCCCTG
AACCAGCTCAGAACTCCCCAACATTGATATTTGGGGGAAGGGGGTCATTA
GAAAGAGTTTTCTGCCACTATTTTCCTGACTGATTCTAGTTCGAGAGTCA
ACTGTTTATTTATTTTTTTATTTACAGACGCCAGATTCAAATGAAGGTTG
TCAAAATATAACGATGAATGAATTTGATGAATTTATGGATTTCATTGTAC
CACGTGGTCATGCCATTATTGGTTTCCACAGTATCCATAGCAACAAAAGA
GAGTAAGAAACTCTTTGATTTTATAATTTTCCATTTGGGTAAAGTCTCAC
GGATCTCATGTTTGGCCTTACCGCAGTAGGTAAAGTGTCCAAGGGAGGCT
CACTAGGTGAAATAAGAGATTTCCAATCTTGGAGATATTTTGAAAATATG
ATGTTTCAATGAATTTCAGATTTGGGAATATTATGAAATATGATGTTTCC
TCAACTATGGAAATATAGAAAAGTCATACCTCCATATTTACAAATGTATA
TGGAAATATCATATTTTCAAGATATTTCCAGGATTGGAAATCTCTTGTTT
CGCCCAAGGGGGGCTGTAAGAATAGTTACTAAAGGTTTACATTGATGGCG
CATCAAATCAATGTTCAAATCTTGGGGATGAATGCTTTACTGCAGATTAT
TTTTGAGAATTTTTCGGGTTAAATTACCTTGATGTTAAGAAACTAAAGTA
AAAGTAGCCACTGGAATGGCCAAGTGGAATCTTAAGCCAGAATGAGCAAT
CACCCCATCCTTTTGTTTACATCTAGAGATCGAAAATGGAGAGCTAATGT
TTGTAAATTTGCTAAATGCCAAGCTATAAGAATGAGAGTATTATCTACAA
TCAAACCACGGCAAGAACAAATTAAAATTATCGGTATAGCAACATCTCAA
GGTTGTTCCAATAAAGCTTCATTCCAAACAAAGCTGGAGAATACGGATTC
GGTTATTGAGACTTCAGCTTTTACCACAGAGAAAGGGACTTCGTTTACTT
TTGGTAGGACCTTATCAGTGGAGGTATCAGGTACTATTGGTTTCCTTGGT
AGTGGGGTGGATGTATCTGTTGGACTGCAAACGACTTTTGAGAACACATG
GCATTGGTCATCATCAAAAACTAAAGAAACATCTCTCAAAACGTCCAGTT
CAGCCTCGCAGTCACTTGGATATAAAGGTTTGTTTACTTTCAACACCCCA
GCCTCACTGGAAAATTTGGCAAAAATTTCGTCCCCGCTGGGAAAATACCC
TGAAATTTCAGCCCCACTTGGAAAGTAGAATCTCTATCCCCACTGGGATA
TCACTAGGAATTTTTATCCCCACTGAGGAAAAGAAGTTCCACCAGGGCTG
TGAGACAGGGGTGTCTTTCAATGCAGTGTAATTGCCACCGCAGCGAGCCT
GAGGGCGACCGAGGATGGCAGTCATTGCTTCACGATAGGATATTGGACAC
GCATCTCGAATTTTTGCGCGCGCATTTTTTTGTTTTTTTTGTTTGCGTTT
GTTAGTATCGTATGTTCCCGCTGAAATGATATCCCGTAAATTTGGCTTCC
CGGTAAAGTTTCATAGCTTTTCCCTTTTAGCATGCGCAGAGGACGCTTTT
CATTGCTTTAACTATTAACGGCGATTGATGAATAACAATTGATGGCGAAG
AAGATGATTATATTTATTTTTCTTATAAGCATCTACTTTATAAGAATGAA
ATCAATAACTCTTTATTGAACGTAATACATCTTTCGGTAATTAGTTCTTA
CAAAGTAAACAATGGGTGGCGAAGAAGATGATCATATTTATTTTTCTTAT
AAGCATCTACTTTATTATAAGAATCAAATCAATAAATCTTTATTGAAGGT
GATATATCTTTCGGTAATTAGTTCTTACAAAGTAAACAATGGATGGCGAA
GAAGATGAGCATATTTATTTTTCTAATAAGCGTCTTCTTTATAAGAATGA
AATCAAAAACTCTTTATTGAAGGTAATATATCTTTCGGTAATTAGTTCTT
ACAAAGTAAACAATGGATGGCAAAGAAAGTGAGCATATTTATCTTTCTTA
TAAGCATCTACTTTATAAGAATCAAATCAATAACTCTTTATTGAAGGTAA
TATACCTTTCGACAATTAGTTCTTACAAAGTAAACAATGGATGGCGAAGA
AGATAAACATATTTATTTTTCTTAAAAGCATCTTGTTTATAAGAATCAAA
TCAATAACTCTTTATTGAGGTTATATACCTTTCGGCAATTAGTTCTTACA
AAGTTAACAATGGATGGCGAAGAAAATGAGCATATCTATTTTTCTTATAA
GTGTCTACTTTATAAGACTCTGTTAAAATAAGGAAATTTTTAGTTGCGAT
TTTGCAAATCTTGTACTTAAATACGTGACCTTTATGAGAGCGGTGGTAGT
TAGTGCAAACTATGACCTAGTGTAGATTTTATTTTAAACTGCAATATACC
AACGATGTAAAAATAATAGATAACCAACTTGCCTTGATTCTCAAAAAACA
TCCGTGTTATGGTTGTAAAAATATTAATGACATTTTGCATCGTAAAAAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAATTTGGGTTAGAAAAAGTGTATTTTCCTATAGGCAGCCTCACAGAAG
GACAGAAGGAATTTTCTAATTAATCAATATATAGTTGTTATATAAACATT
CATCTGTTTATTTTGTATCAGGCAACCTTCATGCACTTTTCATTCGTGAG
ATATCGCAGTTCAAATCACACATATATTTTTCAGATAACAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTATTTATCCAGAT
GAAGATTAAGTGGTATCAGGCTGATCCGTAGTCAATTTGTCTAAAGATTG
GTACCTTTATCTTTTGAAAAAAATTCCGAAATTTGCTGTAAATAACAATT
CAAATTTTCTATCAATTCAGTGGATGTCAAAAAGTGTGTCAAAATCTAGC
AAAAAGCATAACACGCACTGCACACAGAGCTTTTTAATAGAGTGCTCATT
TCAATAGGAAAACAATGGTTGTTCTCTTGGGAGAAGTGCCTTCTAGAGGT
AGTTGGTTATCTATTATTTTTACATCGTTGCTTGAAGATTGCGCCAACAT
GAAACACCATGTGCGTTTGTAAGTTTGTTCTTTATGTCTCGAATTTTCTT
GAATGCTTTGTGATTCTATTAATTTCACTGTATTATTTACTTTCAGGCTC
ATCTTGAAGCTTATGTGCCATTTTTTGAAAAAAGAAAACTTAAATATTAG
TTTCCCACAGCACTGAAGACGAATGAGAGTTTTTATTAAAAATTTGGAGA
TTTGATGTTTCACAGAAAAGTGCTAGCAAGGGGCATTTCGGATCCCATAT
CTTCCGAAGGACTTTTCCGTTTGCCTTGAAATTTGACAAGCTTCTTAACC
TAAGGTTCACCGAGCATAACTAGAAAAAAAAGCTCAATTTTTGAAATCGC
AAATTTAACCGCTAAAAATCGCGAATTTTTCAGCCAAAAATACATTCAAA
CATAGCACGTTAGATTTTCTAAAATAAGCAAAAAGAATCTTCGCATAAAT
TTTATTTGACTATCAAAAGTTACAGGCATTCTTGTTTCCACTGCCAATTA
TATCTGGATAGACTTTAAAATCACTTCTTTACTTTCAGGACCTGGAGCAG
CGTTGATCATAGGATATGTCACATATTACAGATATGAAAATACAGATGTG
GACGTTGAGTACGACATAACATGTGACAACGGTCAACATCGAAAACAACG
CTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAACACATTTTGTTC
AAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGACTATGGAAGTAAT
GATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGCGCCAAATAAACT
TATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATATGAAGCCGACAA
AACCAACGACTGCGACAACGACTACGTCAAGACCGACAAAAATACGACAT
GATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACTAAAACCACGTTG
GAAAGATAACAATAAAGACAACATTTTCACTGGATCTGCAGTCACCGTCA
ATCATGTAATCTTAAACAATATTAAATTTATAGTTTCAATTTTACTCTCC
ATTAGTATAATTTTTATGTAGCAAGTTATATTCGAAGAGCAGGCAATATA
CGTTCTTTTCTAACTATGTGTATACGGTGCTAGTGATTGTAGATACCGTT
AATACGCTGGCTAGGCCTTCAAAAATATCTACCCTTGCTATGAGCTTTTT
TGAGTGCATCCATTTCGATGCATAGGCAAAGGAGGGCTATTATTCATCGA
TATTATATGTGTTAAATAATAATTTTATAAGAAAGGGCATTTTAGAATTT
ATTTCAAAATGCATTTCGAAGTATAATTGAATTACGCGAGCGATATCGAG
CAAAAAGCAAAACACGATACTTCTTACGCTAACATTTCACGCAAAATTTT
ATGATAGAATATAGTTGAAACATTGGCATTACTATATATTTACTATTTTT
TCCATTCCCCAGCCATGAAAGATGGCATAGAATATCAATTCCCATCGGGT
TTCAGTCCATTAATTTCATCCCCACTGGTAGAAAAAAATCCTACCGGGTC
TGTGAAAAGGGGGTGTATAATTACTAGGAGAAAGTCAATGCAAGAAATTC
ATACATTTGCCAAGCGTACTTTGTAAACTCTGACCCAATCTCCTTAGGGT
TTAATGATAGTAGATGTATTATCAGGTTTCTCTTAAGCCCGGGGGGGGGG
CACTCATATTTTCCGACCAACGGCATGTGCCATCTTTAAGAGTAGGTATT
TCAAGACTCTCGAAATGCACTGTAAGGGTGTACTTTTGATAGAGTGCACT
ACAAAGGGTCTTCTTTTTAGGTGAATACACTGTAATGGTGTGTTTGGGGA
CTGCTGAATTGCAAGTCTGACAGCAAGAATCTTTATAGTTTGGCTCGCAC
CCATTTTGATTTGTTTTGCACTTTGTCTCGACATCCCGGGCTCATTTTTA
GATGGCGTCACCAAAATAAGATATGAAATCAAACTACACTGTAAGGGTCA
GAAACGTTTGGTAGATGCACTGTTAAGGGTATCCTTTCACTGCTCAAGAG
ATTCACTGTAAGGGTCCGATTCTGAAAGCCATTTCTTTGGCGGCACTTGC
CGTAGTTTAAAAATCGAGTGCTTCGTTCTTAAAATCAATCAGAGAAAAAA
AAAATCTAAATTTGTGTCAGAATCCGAGAATCAAATATCA

Coding sequence (CDS) from alignment at scaffold_358:242386..250375-

>TCONS_00061425 ID=TCONS_00061425|Name=TCONS_00061425|organism=Clytia hemisphaerica|type=CDS|length=7125bp|location=Sequence derived from alignment at scaffold_358:242386..250375- (Clytia hemisphaerica)
GACCTGGAGCAGCGTTGATCATAGGATATGTCACATATTACAGATATGAA
AATACAGATGTGGACGTTGAGTACGACATAACATGTGACAACGGTCAACA
TCGAAAACAACGCTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAA
CACATTTTGTTCAAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGAC
TATGGAAGTAATGATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGC
GCCAAATAAACTTATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATA
TGAAGCCGACAAAACCAACGACTGCGACAACGACTACGTCAAGACCGACA
AAAATACGACATGATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACT
AAAACCACGTTGGAAAGATAACAATAAAGACAACATTTTCACTGGATCTG
CAGTCACCGTCAATCATGTAATCTTAAACAATATTAAATTTATAGTTTCA
ATTTTACTCTCCATTAGTATAATTTTTATGTAGAGATCGAAAATGGAGAG
CTAATGTTTGTAAATTTGCTAAATGCCAAGCTATAAGAATGAGAGTATTA
TCTACAATCAAACCACGGCAAGAACAAATTAAAATTATCGGTATAGCAAC
ATCTCAAGGTTGTTCCAATAAAGCTTCATTCCAAACAAAGCTGGAGAATA
CGGATTCGGTTATTGAGACTTCAGCTTTTACCACAGAGAAAGGGACTTCG
TTTACTTTTGGTAGGACCTTATCAGTGGAGGTATCAGGTACTATTGGTTT
CCTTGGTAGTGGGGTGGATGTATCTGTTGGACTGCAAACGACTTTTGAGA
ACACATGGCATTGGTCATCATCAAAAACTAAAGAAACATCTCTCAAAACG
TCCAGTTCAGCCTCGCAGTCACTTGGATATAAAGACGCCAGATTCAAATG
AAGGTTGTCAAAATATAACGATGAATGAATTTGATGAATTTATGGATTTC
ATTGTACCACGTGGTCATGCCATTATTGGTTTCCACAGTATCCATAGCAA
CAAAAGAGAGCAAACATCAAAATGCTGAAGAAGACAGACAATGGAAATAT
ACTTGTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTCAGTAGATTA
TGTTAATAATTATGACCAAATCATGGATTGGAAATGTGCTCAAAATGGAC
TTGTTGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAAGATCGAATC
TGGAAATTTAAATGTTGCCAGAAAATCACTTCATCAAGTATGGCTTTCGT
CGTTAAATTGGCTACCATTTTTCTTTGGTTGTTGCTAAGCAACGTATGGA
CACAGTACATAAACGAATTTGACGAAGAACTTCGATTTGAATGTCCAAAG
AATCAATATATCAGTGAAATCGGCAGACCTGGAGCAGCGTTGATCATAGG
ATATGTCACATATTACAGATATGAAAATACAGATGTGGACGTTGAGTACG
ACATAACATGTGACAACGGTCAACATCGAAAACAACGCTCAAAAGCGTCC
TTAAAACTTGATCGATACAGCCAAACACATTTTGTTCAAAAACATGGCGC
ATTTTATTCCAAGCAAAATTGTGACTATGGAAGTAATGATTGTATAAGAA
GCTTAAACGGGAAAAAAACACTGGCGCCAAATAAACTTATTTCCGATTTC
GAACGCTGTATCGAGAAAGCAAATATGAAGCCGACAAAACCAACGACTGC
GACAACGACTACGTCAAGACCGACAAAAATACGACATGATGTTCTTTCTG
ACGTCACAAGAGATACGGTTAAACTAAAACCACGTTGGAAAGATAACAAT
AAAGACAACATTTTCACTGGATCTGCAGTCACCGTCAATCATGTAATCTT
AAACAATATTAAATTTATAGTTTCAATTTTACTCTCCATTAGTATAATTT
TTATGTAGAGATCGAAAATGGAGAGCTAATGTTTGTAAATTTGCTAAATG
CCAAGCTATAAGAATGAGAGTATTATCTACAATCAAACCACGGCAAGAAC
AAATTAAAATTATCGGTATAGCAACATCTCAAGGTTGTTCCAATAAAGCT
TCATTCCAAACAAAGCTGGAGAATACGGATTCGGTTATTGAGACTTCAGC
TTTTACCACAGAGAAAGGGACTTCGTTTACTTTTGGTAGGACCTTATCAG
TGGAGGTATCAGGTACTATTGGTTTCCTTGGTAGTGGGGTGGATGTATCT
GTTGGACTGCAAACGACTTTTGAGAACACATGGCATTGGTCATCATCAAA
AACTAAAGAAACATCTCTCAAAACGTCCAGTTCAGCCTCGCAGTCACTTG
GATATAAAGACGCCAGATTCAAATGAAGGTTGTCAAAATATAACGATGAA
TGAATTTGATGAATTTATGGATTTCATTGTACCACGTGGTCATGCCATTA
TTGGTTTCCACAGTATCCATAGCAACAAAAGAGAGCAAACATCAAAATGC
TGAAGAAGACAGACAATGGAAATATACTTGTCGTTCTGGTCTAGTAAATG
ATCAATGTGATTGGTCAGTAGATTATGTTAATAATTATGACCAAATCATG
GATTGGAAATGTGCTCAAAATGGACTTGTTGCTGGTGTCCGAAGTATCCA
TAGCAATGAGAGGGAAGATCGAATCTGGAAATTTAAATGTTGCCAGAAAA
TCACTTCATCAAGTATGGCTTTCGTCGTTAAATTGGCTACCATTTTTCTT
TGGTTGTTGCTAAGCAACGTATGGACACAGTACATAAACGAATTTGACGA
AGAACTTCGATTTGAATGTCCAAAGAATCAATATATCAGTGAAATCGGCA
GACCTGGAGCAGCGTTGATCATAGGATATGTCACATATTACAGATATGAA
AATACAGATGTGGACGTTGAGTACGACATAACATGTGACAACGGTCAACA
TCGAAAACAACGCTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAA
CACATTTTGTTCAAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGAC
TATGGAAGTAATGATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGC
GCCAAATAAACTTATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATA
TGAAGCCGACAAAACCAACGACTGCGACAACGACTACGTCAAGACCGACA
AAAATACGACATGATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACT
AAAACCACGTTGGAAAGATAACAATAAAGACAACATTTTCACTGGATCTG
CAGTCACCGTCAATCATGTAATCTTAAACAATATTAAATTTATAGTTTCA
ATTTTACTCTCCATTAGTATAATTTTTATGTAGAGATCGAAAATGGAGAG
CTAATGTTTGTAAATTTGCTAAATGCCAAGCTATAAGAATGAGAGTATTA
TCTACAATCAAACCACGGCAAGAACAAATTAAAATTATCGGTATAGCAAC
ATCTCAAGGTTGTTCCAATAAAGCTTCATTCCAAACAAAGCTGGAGAATA
CGGATTCGGTTATTGAGACTTCAGCTTTTACCACAGAGAAAGGGACTTCG
TTTACTTTTGGTAGGACCTTATCAGTGGAGGTATCAGGTACTATTGGTTT
CCTTGGTAGTGGGGTGGATGTATCTGTTGGACTGCAAACGACTTTTGAGA
ACACATGGCATTGGTCATCATCAAAAACTAAAGAAACATCTCTCAAAACG
TCCAGTTCAGCCTCGCAGTCACTTGGATATAAAGACGCCAGATTCAAATG
AAGGTTGTCAAAATATAACGATGAATGAATTTGATGAATTTATGGATTTC
ATTGTACCACGTGGTCATGCCATTATTGGTTTCCACAGTATCCATAGCAA
CAAAAGAGAGCAAACATCAAAATGCTGAAGAAGACAGACAATGGAAATAT
ACTTGTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTCAGTAGATTA
TGTTAATAATTATGACCAAATCATGGATTGGAAATGTGCTCAAAATGGAC
TTGTTGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAAGATCGAATC
TGGAAATTTAAATGTTGCCAGAAAATCACTTCATCAAGTATGGCTTTCGT
CGTTAAATTGGCTACCATTTTTCTTTGGTTGTTGCTAAGCAACGTATGGA
CACAGTACATAAACGAATTTGACGAAGAACTTCGATTTGAATGTCCAAAG
AATCAATATATCAGTGAAATCGGCAGACCTGGAGCAGCGTTGATCATAGG
ATATGTCACATATTACAGATATGAAAATACAGATGTGGACGTTGAGTACG
ACATAACATGTGACAACGGTCAACATCGAAAACAACGCTCAAAAGCGTCC
TTAAAACTTGATCGATACAGCCAAACACATTTTGTTCAAAAACATGGCGC
ATTTTATTCCAAGCAAAATTGTGACTATGGAAGTAATGATTGTATAAGAA
GCTTAAACGGGAAAAAAACACTGGCGCCAAATAAACTTATTTCCGATTTC
GAACGCTGTATCGAGAAAGCAAATATGAAGCCGACAAAACCAACGACTGC
GACAACGACTACGTCAAGACCGACAAAAATACGACATGATGTTCTTTCTG
ACGTCACAAGAGATACGGTTAAACTAAAACCACGTTGGAAAGATAACAAT
AAAGACAACATTTTCACTGGATCTGCAGTCACCGTCAATCATGTAATCTT
AAACAATATTAAATTTATAGTTTCAATTTTACTCTCCATTAGTATAATTT
TTATGTAGAGATCGAAAATGGAGAGCTAATGTTTGTAAATTTGCTAAATG
CCAAGCTATAAGAATGAGAGTATTATCTACAATCAAACCACGGCAAGAAC
AAATTAAAATTATCGGTATAGCAACATCTCAAGGTTGTTCCAATAAAGCT
TCATTCCAAACAAAGCTGGAGAATACGGATTCGGTTATTGAGACTTCAGC
TTTTACCACAGAGAAAGGGACTTCGTTTACTTTTGGTAGGACCTTATCAG
TGGAGGTATCAGGTACTATTGGTTTCCTTGGTAGTGGGGTGGATGTATCT
GTTGGACTGCAAACGACTTTTGAGAACACATGGCATTGGTCATCATCAAA
AACTAAAGAAACATCTCTCAAAACGTCCAGTTCAGCCTCGCAGTCACTTG
GATATAAAGACGCCAGATTCAAATGAAGGTTGTCAAAATATAACGATGAA
TGAATTTGATGAATTTATGGATTTCATTGTACCACGTGGTCATGCCATTA
TTGGTTTCCACAGTATCCATAGCAACAAAAGAGAGCAAACATCAAAATGC
TGAAGAAGACAGACAATGGAAATATACTTGTCGTTCTGGTCTAGTAAATG
ATCAATGTGATTGGTCAGTAGATTATGTTAATAATTATGACCAAATCATG
GATTGGAAATGTGCTCAAAATGGACTTGTTGCTGGTGTCCGAAGTATCCA
TAGCAATGAGAGGGAAGATCGAATCTGGAAATTTAAATGTTGCCAGAAAA
TCACTTCATCAAGTATGGCTTTCGTCGTTAAATTGGCTACCATTTTTCTT
TGGTTGTTGCTAAGCAACGTATGGACACAGTACATAAACGAATTTGACGA
AGAACTTCGATTTGAATGTCCAAAGAATCAATATATCAGTGAAATCGGCA
GACCTGGAGCAGCGTTGATCATAGGATATGTCACATATTACAGATATGAA
AATACAGATGTGGACGTTGAGTACGACATAACATGTGACAACGGTCAACA
TCGAAAACAACGCTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAA
CACATTTTGTTCAAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGAC
TATGGAAGTAATGATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGC
GCCAAATAAACTTATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATA
TGAAGCCGACAAAACCAACGACTGCGACAACGACTACGTCAAGACCGACA
AAAATACGACATGATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACT
AAAACCACGTTGGAAAGATAACAATAAAGACAACATTTTCACTGGATCTG
CAGTCACCGTCAATCATGTAATCTTAAACAATATTAAATTTATAGTTTCA
ATTTTACTCTCCATTAGTATAATTTTTATGTAGAGATCGAAAATGGAGAG
CTAATGTTTGTAAATTTGCTAAATGCCAAGCTATAAGAATGAGAGTATTA
TCTACAATCAAACCACGGCAAGAACAAATTAAAATTATCGGTATAGCAAC
ATCTCAAGGTTGTTCCAATAAAGCTTCATTCCAAACAAAGCTGGAGAATA
CGGATTCGGTTATTGAGACTTCAGCTTTTACCACAGAGAAAGGGACTTCG
TTTACTTTTGGTAGGACCTTATCAGTGGAGGTATCAGGTACTATTGGTTT
CCTTGGTAGTGGGGTGGATGTATCTGTTGGACTGCAAACGACTTTTGAGA
ACACATGGCATTGGTCATCATCAAAAACTAAAGAAACATCTCTCAAAACG
TCCAGTTCAGCCTCGCAGTCACTTGGATATAAAGACGCCAGATTCAAATG
AAGGTTGTCAAAATATAACGATGAATGAATTTGATGAATTTATGGATTTC
ATTGTACCACGTGGTCATGCCATTATTGGTTTCCACAGTATCCATAGCAA
CAAAAGAGAGCAAACATCAAAATGCTGAAGAAGACAGACAATGGAAATAT
ACTTGTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTCAGTAGATTA
TGTTAATAATTATGACCAAATCATGGATTGGAAATGTGCTCAAAATGGAC
TTGTTGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAAGATCGAATC
TGGAAATTTAAATGTTGCCAGAAAATCACTTCATCAAGTATGGCTTTCGT
CGTTAAATTGGCTACCATTTTTCTTTGGTTGTTGCTAAGCAACGTATGGA
CACAGTACATAAACGAATTTGACGAAGAACTTCGATTTGAATGTCCAAAG
AATCAATATATCAGTGAAATCGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038535XLOC_038535Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061425-exon-scaffold_358-1575043694:250221..250375TCONS_00061425-exon-scaffold_358-1575043694:250221..250375Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1575043694:249396..249607TCONS_00061425-exon-scaffold_358-1575043694:249396..249607Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1575043694:247724..247848TCONS_00061425-exon-scaffold_358-1575043694:247724..247848Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1575043694:246799..247199TCONS_00061425-exon-scaffold_358-1575043694:246799..247199Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1575043694:242386..244037TCONS_00061425-exon-scaffold_358-1575043694:242386..244037Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1510915933:250221..250375TCONS_00061425-exon-scaffold_358-1510915933:250221..250375Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1510915933:249396..249607TCONS_00061425-exon-scaffold_358-1510915933:249396..249607Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1510915933:247724..247848TCONS_00061425-exon-scaffold_358-1510915933:247724..247848Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1510915933:246799..247199TCONS_00061425-exon-scaffold_358-1510915933:246799..247199Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1510915933:242386..244037TCONS_00061425-exon-scaffold_358-1510915933:242386..244037Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1491911889:250221..250375TCONS_00061425-exon-scaffold_358-1491911889:250221..250375Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1491911889:249396..249607TCONS_00061425-exon-scaffold_358-1491911889:249396..249607Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1491911889:247724..247848TCONS_00061425-exon-scaffold_358-1491911889:247724..247848Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1491911889:246799..247199TCONS_00061425-exon-scaffold_358-1491911889:246799..247199Clytia hemisphaericaexon
TCONS_00061425-exon-scaffold_358-1491911889:242386..244037TCONS_00061425-exon-scaffold_358-1491911889:242386..244037Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061425-proteinTCONS_00061425-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:242386..250375 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.0238887	0	0	0	0	2.18027	1.05093	0	4.50421e-09	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061425 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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