TCONS_00061313 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061313
Unique NameTCONS_00061313
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5384

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061313 ID=TCONS_00061313|Name=TCONS_00061313|organism=Clytia hemisphaerica|type=transcript|length=5384bp
ttaggtaaaaaaatttgatgtcggatatatccgacattggcaagtagagt
gaaaatttgcatgtcggatatatacgacatcggcacggaaagggttaaaa
gaacaaattgcttttcccagattttttccgcatctccgcaccggaaaatc
agcggaaaatttgatacgggcgggtgacgcgaatagaataATTTTGCGAT
GACCGCCTCTGATGATGACAGATGTTTGGCAGCCTAGACTAAGGCGGCAA
TGtaaaatatgttctgttcgcgtcgcccgaccgactcaccttcaaaacat
aaatcccGAGTCGGACAAGTcggaaaaatgtcagaaaaagtttttgatag
ctAAGCACTTCTTTGAATCATCATTCGCTAAGAGTTTTTgttacttaacc
cacattgagtcacgtttgagttttttcatgtacccttattgaaattttca
agtcgaaATTCGGCGACGCGGTAGGGCCAACACCCCCGAGAGCCGAAAAT
AAGGTCAGCTTTTAAGGTTCACACATGCGTTGCGCACATTGAATTTggca
aatcaaagatggcaacaagagattttgttgattgccAACTTGATTCTTCG
GGATTTATTAGATTTTAAAAacccgacaaaatttactaccgaccgaccga
ccgactggatttgaagttgttttatgacacgaacagaacatattttagat
agtcgcctaatgttaatttttctttcagaaaaaagactataatttcttta
cctttattcctgcagcttcccaacatccaagctctcaaacatcacaagcc
gaatgaaattactttctatttcccgtagaaattatgcgatgaaaaatccg
ggggtcgaagaatgaagactttttatttCCGAACAAGTTATCTTTGCTTA
TATATACCAGActtccgcgctcgataggatcggaaggtgatagaaattga
ccgtcagttgaacattttttttaatcggCGCGGCACATATAAAATAAAGA
CCGGAATGAAATTTATTGCataaatcaaaataattatgcatgatTATGCA
GGTAAACAGTAATTTCGGCGGGAACCAATACACCAtacacgcgaaatttt
ttttcactggcCTTGAGGTCCTGGATGGAAGAAAAAGAATGTAAAGGGAA
AGACACAAGACAAAAGGGGAAACAATGAAAAGGTCGAAACGGTCGAAGCG
GTCCAAACATAACGAAGCTTTTAAACGACTATTGGTTGACGCTGGTTCAG
ATGAAAGTTCCACTGATGAAACACCAGAAGAACCACCCCCACCACCACCT
GCCCCTATCATTGAAACTCAATCTGGGAAACGACTTAGAATCGACAGAGA
ATCCCACGAACTCTTACAACGACTAAGAGAAGCTGTCATTGTTGTAACAG
TTAACGAAGTATTCACTTTTGACGAGATACCGATGATGTTCAAAACAATG
AAAGATGCATCCATGTTTGTTGACgactttcaaattcaaaataattcaaa
attctcGACTTTTAAAACTAACTACAAGCCTGAAAACGATGAAACAGccA
CTGTCGATCTCAACAACCACAATGTACGAACAGATCATGTACGAAGATAT
CAAACGTCAAAATTCCATAAATCAAATTCCTTTCACTGGATACCCTTTCA
TTGTTATcggaaaaaaacaatttgaatgcACACATGGTAAAGACCGAAAT
GTCaaacaaaaaaggaaaaggaagCAGGAAAAGTTACAACAGAAAGAGAA
TGAGTTGAACTATGGCAAAAGCAAATTTCTCCCTCAAGACACCAAGAAAG
TTAATTGCCCAGCAAAAATAACGatgcaaaattttattttcttcccAGAT
TACAAgGTAAACACAAATAGGAACACAAATACGATATATTATAAGCGCCT
CGTGAACAACAAGCTAAATGCCGATTGGGCCACAAATCCAGGTGCAATCA
AAATGGAGCAGCAAACAATCGTCCACATCGCCGATAACCATTCAGGGCAT
TTGTTAAACAaaTTTGCTGGCCTTTCACAACAAATTGACAAAAGACTGGT
GAGGAAGATTCACGAATCGGTTGGTCATGGTGTACGCGATGTTCGAGAAA
TGCAGCGAGCGCTCAGGGCCTATTGTGATCTCCGACCTGTATCGAGGTTC
AATTCCACCGAGCAGCTCAAGTCGTCGATTTTATCCCGAGCCAAGAGACA
TCCGAAATCATATGAACATTGCTGCGAATAAGTATAGGCGATCCAAAATC
GATCAGGAAAACTTGGAAATGATGATAAACGAGTGGCGAAGATCAAATTT
GGATGATAAATTTCATTTTCGGCGGTATCATTCTGGCACTGCTGAGGAGG
CTGAAAGACAACAAATTTATGATGAGAATGGGAATTGTATTAGTGAAGAA
AATTTATAATCATAATGTCCATTTGAAGTCTTATAGAATCTTAGGAATGT
TTAGCATATGAAttggtttttttttactttgaagaCCAGTTTTCCTGTTT
CAATTTGGGTTGACATTTGACTTAAGTCTTCCGTAACTATTAGGTATTTG
TTTTTGCTCagttaaaaataataattttcttacaTGTGATCAACGATGGT
TCTTCAAGACTGCTCTTTGTCCACCAAACTAACTTCCAAAGACGTATGCT
AAAACGatatggaaataaaatttgtttaCTTGATGCTACGTACAAAACTA
CTAAGTACTCGCTCCCTTTGTTCTTTGTGGCTGTTAAAACCAACGTAGAC
TATCAAGTGGTAGCAAGTTTTGTTACTCAAGATGAGACAACTGCTGCAAT
TACAGAGGCCTTATCTATTATTAAATCATGGAATCCTTTTTCTGATTGGG
ATTGGAACCCTACATGCTTTATGGTGGATAATTGTGAAGAAGAAATTCAA
TCAATCCAGAAGCTGTTTCCAAGCTGCCGAGTGCTTTTATGTGACTTCCA
TCGAGAGCAGGCCTGGGGTCGTTGGCTGTCTGCTACAAAGAATGGAATGA
GACAACACAAAAAGAGAGCTTTAGAATTTCTTCGAGCCATTGCCAGATCC
GAAAGTAATGTCGAATTTGAGCTAAACTTCCAACTTGTGAAGGAAGATCT
TATatggaaagaagaaaatttcagaaattggATAGAAAGAATATGGTTAC
CATGTTTATCAAGCCTGGTCCAGTCTACTTGCGGTACAAGGTTATTTATG
GTTCAACTCAAGAATTGCCAAGATGCAGTTGTCCGGACTGGAAACGAAAT
TACCTACCATGTAAACACATTCTAGCTGTGCTGAAGTATATGGAAAATAA
ATCCTTAGTGCCGTTAGGGAAAAAGCTGTTGGAATCCCTCTCTCACACTA
TCCAGTTAGAGCCAATACTGGTAGAAGATGGCGTAACCGAAGATGACGAT
CCAATTGTACGATACCCAAATGCTTCAGACCTGCTTGTACCAGATTCAAC
CACCCCAACAGAAGAAAGTAATGTATTACCAGCTATAGAAGAGCAACAAA
CGAAACCTCTTAAATCAAATACTGGCCAAAAATGTCGTGAAATTATGAAG
GAGATAGTGAACCTTACACATCTAATGGAACACAATGAAGAAGCACTATT
GATTTTAAAGGGTCAGCTAATCAAATCATTGGAAAATATGTCTACAAAAG
CTCCCAGAGATTTTGGTTTGGTTCTTGACAAAAGAGTGAAAAAACTGCCA
AATAAAGTTCAGACAAAACAACCATTCCAAAATATTCCAAAGCCAAAGAA
GAAAAGCAGCACTGTTAGTCGAGTAGGTGTGGCAAGTGAGATGGATATTC
CAGATATCAAAGAGGAACCCACCAAAAGGAGCCAGAAAATACAGCTAACA
ACTGAGGAATGTATTCCTCTAGATGACAAAGCAGAATATGACATTCCTCT
TCCAGAACCTGGTAAAgctgatgaagatgaaaataaagctGATGAAGATG
AAAGTGAAGCTGATGAAGATGAAAGTTATAGAAATTGACAGtgaagacga
agaagaaaatgatgatgaaaCCGTTTCAGTTCCAGCTGTGATTGCTAAGA
AATGTATCAAAATCTTTCCAAAGATTGTCCCAAAGTTGGAGATTGAACTG
AGGACACCTATAATCACAAATGGATCAGTTTCATTAAGTTACATAGATTT
ACTAGCCTTGGAACCAACAATGTCAAATGCTGATAAAGATGAAATAAGAA
TAGAAGAACCAAAGTTCCAGGTTGGTTGGTTATCAGATAATGTTATTGAT
GCCTTTCTGGAGACTGTTGTATTACACCACAAGAATTGTTTGACAGTGTC
AGCTTCCATAGCTAAGAGCATCAGTCTTGGAAGAGCAAGAGCTTTCAGAC
GCATGTGGATGGGAAAATCAATGGATGATGTTGAAACAGTTTTGGTACCA
TTCAATGCTAGTGGTTCCCATtggattttgataattttgaaagtaaaGGA
GCAAGAAATAATTGTTTTGGATCCAATGACAAAAAGCCTATCTTTGGACA
CTGCTGAGAAAAGTATGGAAATTGGGAAGAAGATCTTTGAGATGAAAATC
CCAGTGAATCTTCAAAACAAAGAACTGAGAATCAATTTAAACATGCCTCA
CACCCTTCAAACTGACACACACAACTGTGGTGTTTTCATATGCTACTATG
GGAAATGTATTGTACAAGatGAATCAATTAATGATGCATTTGGAGTTGAT
GTGTTTAGGCAATCCATGGTTAAAGACTTAACTGGAAATTGTTTATTTAG
CTATGACCCTTCAGTTGGAAAAAGATTATGCAAGGTGTGTAAGAAAACTG
ATGATGCTGGTGATGAAAGCAGTAGAGTCCGGTGGGTACAATGTGGAAGA
TGTTTTCAATGGACACATAACATGTGCTCCTTAAAGGAAATTCTCACCGA
AAGAGATGAAGAAGAATTTGTTTGTTGAGAATCATTTTTTATACTTAAGT
CCAAACGATAAAAATGATTATCGGTTGCAATCGATAGAAAATGGATTGAT
TACATATTGATAACGACAGATACTGTATATAACAATGGATAATCGATACC
TACTCACAATTTTTACAGGTTTGCTAATTattgattacttatcgattaaa
TTTATACCATAGACTACTATCAATTTGATTGATTATAAAATGGGtattaa
ttaatttattaattAAATTAATCAATCTACAATTTTTTAAACCTTAAAAA
TGATCTATTAAATACCAGACGGAACTATTGGAACTAAAATTGGAACTATC
TTCGATGTCTCCCTTCCGTTTCTCATTTGCTCCCCATACTAGTATGAAAG
ATATATCAATTTCcatttattatttcatttatcatttattattgggctat
tccagaaaatttttgttaccccccgtcggaggac
Run BLAST on NCBI

transcript from alignment at scaffold_355:390271..400178-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061313 ID=TCONS_00061313|Name=TCONS_00061313|organism=Clytia hemisphaerica|type=transcript|length=9908bp|location=Sequence derived from alignment at scaffold_355:390271..400178- (Clytia hemisphaerica)
TTAGGTAAAAAAATTTGATGTCGGATATATCCGACATTGGCAAGTAGAGT GAAAATTTGCATGTCGGATATATACGACATCGGCACGGAAAGGGTTAAAA GAACAAATTGCTTTTCCCAGATTTTTTCCGCATCTCCGCACCGGAAAATC AGCGGAAAATTTGATACGGGCGGGTGACGCGAATAGAATAATTTTGCGAT GACCGCCTCTGATGATGACAGATGTTTGGCAGCCTAGACTAAGGCGGCAA TGTAAAATATGTTCTGTTCGCGTCGCCCGACCGACTCACCTTCAAAACAT AAATCCCGAGTCGGACAAGTCGGAAAAATGTCAGAAAAAGTTTTTGATAG CTAAGCACTTCTTTGAATCATCATTCGCTAAGAGTTTTTGTTACTTAACC CACATTGAGTCACGTTTGAGTTTTTTCATGTACCCTTATTGAAATTTTCA AGTCGAAATTCGGCGACGCGGTAGGGCCAACACCCCCGAGAGCCGAAAAT AAGGTCAGCTTTTAAGGTTCACACATGCGTTGCGCACATTGAATTTGGCA AATCAAAGATGGCAACAAGAGATTTTGTTGATTGCCAACTTGATTCTTCG GGATTTATTAGATTTTAAAAACCCGACAAAATTTACTACCGACCGACCGA CCGACTGGATTTGAAGTTGTTTTATGACACGAACAGAACATATTTTAGAT AGTCGCCTAATGTTAATTTTTCTTTCAGAAAAAAGACTATAATTTCTTTA CCTTTATTCCTGCAGCTTCCCAACATCCAAGCTCTCAAACATCACAAGCC GAATGAAATTACTTTCTATTTCCCGTAGAAATTATGCGATGAAAAATCCG GGGGTCGAAGAATGAAGACTTTTTATTTCCGAACAAGTTATCTTTGCTTA TATATACCAGACTTCCGCGCTCGATAGGATCGGAAGGTGATAGAAATTGA CCGTCAGTTGAACATTTTTTTTAATCGGCGCGGCACATATAAAATAAAGA CCGGAATGAAATTTATTGCATAAATCAAAATAATTATGCATGATTATGCA GGTAAACAGTAATTTCGGCGGGAACCAATACACCATACACGCGAAATTTT TTTTCACTGGCCTTGAGGTCCTGGATGGAAGAAAAAGAATGTAAAGGGAA AGACACAAGACAAAAGGGGAAACAATGAAAAGGTCGAAACGGTCGAAGCG GTCCAAACATAACGAAGCTTTTAAACGACTATTGGTTGACGCTGGTTCAG GTATCTTTTCTTCAATCTTTCTTCAAGATTACTAATATTTAGGCTGCTGG ATATTTTGTCAAATCAAAATAAATCTCCTTCTTACCTTAGTGGGCATCCA CAGGAAGGAATAAAAAAGAGATTTCTTTACTCCTTCACGCTCTCGCCCAG CCTCAGCCTCTCGCTTTAAGACTCTTTAGAATTTCATGGAGCTTGCGCCA CAACACAGTTTAAATTTTAAACCACAAGAGGTTATTTAACACGAGGAGTC TGTAAGCCAGACATACAGACAGACGGACAAATTTTACAACAACAATAATA TACTGTAGGGCTTTTTCTGTACAACCCTTTAACTTTTGATCTAGTTGGTC TTTTTGAATGAAATTTGGCACACATGATCCTTGTCACGTAAGGTAGCTTT TGACAAAAATTTATTTCGATGACGTCACTCATCATGCCGGAAGTGAGCAA AAATCGCAAGTTTCCTTTGTTCTTCCAAAAGGCTATTTTAACTAATCAGG GCTTTAGAAAAAAGTTCTATGAGTTTAAAAGGCTTATTTTATCCTAAATA TTCAATAAATTACGGTTTGAACGATATAGTTTTATTTTTACAAGAGCTAT TAACATTAATTTACCCACCGAACAGAAACAGCCCCCCTAGTACGAATTAG TACGGGTTAATGGTATTTATTTTCGCGTGTTACTAATTTTCGCGAATCAC GAATTTTTTTTGAGAAAAGGGACCATTTAAAAAGTACGTACGCTGAGAGG GGGGAGGGGGGGTACTCCCAAAAGCGTACGAGGGGGGTCGTTGAGGAGAA GTACGTACGCTCGTAATTTTTCCTAAACTGTCTTTTTTGAGAGAAAAACG CAATATTTTCACATCAAAAAACTGTTTTTGCGATTGTTATTTTTCATTTC TCCTTTGGTATTTTTGTTTATCTTATAGAATATTTTAATTTCTTGAGACT TTGTTATAAATACGATTGGATACCTACATATTCTACTGTTACAAGAGTTT CAAGTTTCGACTTTGGTTAGAGGGGGGTGTACTAAAAAGCGTACGTACAC TGAAGGGGGGGTACACATAAAGCGTACGGAAGCGTACAAGGGGGGAGGGG GAGTCAAAAATTAGCCATTTTCGAGGGTACGTACTTTTTGAATGGTCCCA AACGTGTTTCCCGGGTATTAAATTTCACGATTTTGTATCTTCGAAAAATT TAAACGGTATTAAACGGTATGTAATCCAGTTCCATGACTAAAATTCTTTG TCCTATTTTGAAAGATGAAAGTTCCACTGATGAAACACCAGAAGAACCAC CCCCACCACCACCTGCCCCTATCATTGAAACTCAATCTGGGAAACGACTT AGAATCGACAGAGAATCCCACGAACTCTTACAACGACTAAGAGAAGCTGT CATTGTTGTAACAGGTGAGGAGGAAGAGGAAAATCACATGATTTATTTAA GTTAAAGTAATTATTCTCAAGATTAATCTCACTACACAGTTTCATTATTG AAAGAATATCTTTACATTCTCTATCTTGAAGAACGTCCAAAAATGTTCAT TACCATAATAATTCTTCCTCTCAGATGAATCAGAATCAGATCCAGTTGAT TTTGACGAAGTTGAGCTTAACCATGAGCCAGACGGTCCAGTGGAGTTAAA TCATGAGCCATACGGTCAAGTGGAGTTAAATCATCAGCCAGACAGTCCAG TGGAGTTAAATCATCAGCCAGACGGTCAAGTGGAGTTAAATCATCAGCCA GACGGTCCAGTGGAGTTAAATCATCAGCCAGACGGTCTAGTAAATGAAAA CCAAAATCCCATCGGTAATGCTATATTCATAACACTAAACGTCTTTGTAA TTGAGCTTGACAGATACACATTTTGAACTGAAAGAAAAAAGAATTAAACG GAGTGAATACATTTGAATTCCGTACCCATATGTGCCCTTTAGAATCCTGG GGGAAGGGGGGGGCTGAAACCATGATCTGGCATAGGTATCAGTAGAGCTA ATCAACGTTTCATGTACTATTAATTTGTTTCAGTTAACGAAGTATTCACT TTTGACGAGATACCGATGATGTTCAAAACAATGAAAGATGCATCCATGTT TGTTGACGACTTTCAAATTCAAAATAATTCAAAATTCTCGACTTTTAAAA CTAACTACAAGCCTGAAAACGATGAAACAGGTAGCCATCATTTTATTATC TTTTGTTATGCCTTAAGAAAGTAGATGGGGCTCCAGGAGGGGGATCTTTC GTCAAATAACGGCATATTGGTAAAATGATAATCTAAGGAAAGTTTTGAAG AATCTTTAATTTTTTTAGCCACTGTCGATCTCAACAACCACAATGTACGA ACAGATCATGTACGAAGATATCAAACGTCAAAATTCCATAAATCAAATTC CTTTCACTGGATACCCTTTCATTGTTATCGGAAAAAAACAATTTGAATGC ACACATGGTAAAGACCGAAATGTCAAACAAAAAAGGAAAAGGAAGCAGGA AAAGTTACAACAGGTATTAAATCATTATACACCTAACCTTTTAAAAAAAC AGACAAAAGATTATATAAATAAAACCCATAAACACTGAAGTCTCATGAGA TTTGTGCATTGTGAGAAAGGCAATAATTAAATTTTTCTTCAAAGAAAATC AAAAGCCTACGGTGTTAAGTGTGGCAGGACTTTTAATATCAATATTTTTC AATTTCGTTTTTTTAGAAAGAGAATGAGTTGAACTATGGCAAAAGCAAAT TTCTCCCTCAAGACACCAAGAAAGTTAATTGCCCAGCAAAAATAACGATG CAAAATTTTATTTTCTTCCCAGATTACAAGGTTAAAATTATTCTTTTATG TAGGATTTTTTAAATCACTCTCTTTATTTAAAGGATTGTTCAAAGTGGAA GAGCAAATTTGAAAGCTCGACTCGTTCTAAGATATAAAGATATAATCATT TGAATTTTAGAAGAAAAGGTTTGAATTTAGGAAAAACGAAGAGAAAGAGT TGATATTTTTTATAAGTAACATCAACACAAAGTTATTTTATTTTTCCTAT TGGGATAATAAAACTATTGATAAATTACTGTCTAGAAGAAAAAGGAAAGG AGTAAATGAGGGCTGTGACATATCTACTTTCTAACCACAACAATTTGTTA TACAGGTAAACACAAATAGGAACACAAATACGATATATTATAAGCGCCTC GTGAACAACAAGCTAAATGCCGATTGGGCCACAAATCCAGGTGCAATCAA AATGGAGCAGCAAACAATCGTCCACATCGCCGATAACCATTCAGGGCATT TGTTAAACAAAGTGAGTGAAAAAAAAAACTTAAATAGACTACACCTATCA AGATAAAAACATCAAGAGAGGTAGTTAGGCACGATTTAGCCGTGCTAATC AATATCATCCTATTCAAATCAATAGGTGAAGCAATGCAAAAATTCAGACT TTTGACGTAAATTGTCACGGGTAAATTCATTCCTAAACCGTTATTTTTAT CTTGATAGGTATATTGAGTGAAAAGGGTATTCTAGGATTATTACCTGTCA TATAGTTGATTTGGATTTTAAAATAAGGGTTTCACTCCAATTTAGTTTGC TGGCCTTTCACAACAAATTGACAAAAGACTGGTGAGGAAGATTCACGAAT CGGTTGGTCATGGTGTACGCGATGTTCGAGAAATGCAGCGAGCGCTCAGG GCCTATTGTGATCTCCGACCTGTATCGAGGTTCAATTCCACCGAGCAGCT CAAGTCGTCGATTTTATCCCGAGCCAAGAGACATCCGAAATCATATGAAC ATTGCTGCGAATAAGTATAGGCGATCCAAAATCGATCAGGAAAACTTGGA AATGATGATAAACGAGTGGCGAAGATCAAATTTGGATGATAAATTTCATT TTCGGCGGTATCATTCTGGCACTGCTGAGGAGGCTGAAAGACAACAAATT TATGATGAGAATGGGAATTGTATTAGTGAAGAAAATTTATAATCATAATG TCCATTTGAAGTCTTATAGAATCTTAGGAATGTTTAGCATATGAATTGGT TTTTTTTTACTTTGAAGACCAGTTTTCCTGTTTCAATTTGGGTTGACATT TGACTTAAGTCTTCCGTAACTATTAGGTATTTGTTTTTGCTCAGTTAAAA ATAATAATTTTCTTACATGTGATCAACGATGGTTCTTCAAGACTGCTCTT TGTCCACCAAACTAACTTCCAAAGACGTATGCTAAAACGATATGGAAATA AAATTTGTTTACTTGATGCTACGTACAAAACTACTAAGTACTCGCTCCCT TTGTTCTTTGTGGCTGTTAAAACCAACGTAGACTATCAAGTGGTAGCAAG TTTTGTTACTCAAGATGAGACAACTGCTGCAATTACAGAGGCCTTATCTA TTATTAAATCATGGAATCCTTTTTCTGATTGGGATTGGAACCCTACATGC TTTATGGTGGATAATTGTGAAGAAGAAATTCAATCAATCCAGAAGCTGTT TCCAAGTAAGAAAGATTTACTTTTTGATTTATTTTTACTTTTTGATTCCC TTTCTCTCAAAATGTACAATATTTATTTTAGATACCATACAAAACTTTGT TATATCTTTCTAATATAATGCATTTTATAACAATAGGCTGCCGAGTGCTT TTATGTGACTTCCATCGAGAGCAGGCCTGGGGTCGTTGGCTGTCTGCTAC AAAGAATGGAATGAGACAACACAAAAAGAGAGCTTTAGAATTTCTTCGAG CCATTGCCAGATCCGAAAGTAATGTCGAATTTGAGCTAAACTTCCAACTT GTGAAGGAAGATCTTATATGGAAAGAAGAAAATTTCAGAAATTGGATAGA AAGAATATGGTTACCATGTTTATCAAGTAAGTTTATGTAAAAAGGGAATA AGATTCTTGATTGCAAACTATTGAAAAAGTATTATGAGCACATGGTTTCA ATAAAAATTGGCTGCAGACAGGAATTTTGTTTAAAATCTGCATTTTAAAA TAAGGTTTATACACCGTCTTTCTTGTAGATGTGGGTGAGAGCATACAGAG ATGGTCTCATTGAGGTCCCAGTCCACACAAATAATGGCGTGGAGCGGAAA AATAAAGACTGCATGGATACCTCAAGCAGCATTCTGACAAAAGTTTAAGT GGAATGGTTTCTGTACTGAAAAAAATTTTTGAAAGTTCTTTAAAAAGAAT TAAAATATAAGCACTTACTACACCAAAAGTGCTAGTTTTAGTGTTTGGCA CCACCCCAAACAGCAGTTACTACACTGTGTAGTAACTGTTTTCATAACTT CTGAATACAGTACCACCACAGTAGTAAGTGTCATACTGTCTTGTAGTAAC TGTGTCCCCCCCCCCTGCCTAAGATAATCTTTTTAGGCCAAATTATCATA TATTGTATTTGCTTTTTAAAGAAATTTATTTCTAATTTCAGGCCTGGTCC AGTCTACTTGCGGTACAAGGTTATTTATGGTTCAACTCAAGAATTGCCAA GATGCAGTTGTCCGGACTGGAAACGAAATTACCTACCATGTAAACACATT CTAGCTGTGCTGAAGTATATGGAAAATAAATCCTTAGTGCCGTTAGGGAA AAAGCTGTTGGAATCCCTCTCTCACACTATCCAGTTAGAGCCAATACTGG TGAGTGTAATTTTAACATTTCCTACCCTAAAAAAGATTGTGAATCAGAAA TCGGTTGAGAGTTCAGGAACCTGAACTTGAAATTCGAACTTACCATGCAA ATTTTTTATCAACACATAACAACCATTTTCATTAAAAGGTAGAAGATGGC GTAACCGAAGATGACGATCCAATTGTACGATACCCAAATGCTTCAGACCT GCTTGTACCAGATTCAACCACCCCAACAGAAGAAAGTAATGTATTACCAG CTATAGAAGAGCAACAAACGAAACCTCTTAAATCAAATACTGGCCAAAAA TGTCGTGAAATTATGAAGGAGATAGTGAACCTTACACATCTAATGGAACA CAATGAAGAAGCACTATTGATTTTAAAGGGTCAGCTAATCAAATCATTGG AAAATATGTCTACAAAAGCTCCCAGAGATTTTGGTTTGGTTCTTGACAAA AGAGTGAAAAAACTGCCAAATAAAGTTCAGACAGTAAGTTCTTCATAAGA TATTTCCTTGGTTCTAAAGATGATTCAGTTGCTACTCCCACAGTAGAACT TTTTAAAACATTTGTCCATTTGTTGTTTTCCAGAAAAAGAAATGTTTGGG TTAAATTCGGAGAGTTACATATAATATTTCTCGACTGTCATGAGTTTTCA GGTGAATAAAACTTTTTCAAGGAAATCAATAAAATTGGGAAATTACATAT ATTTAACTATAATTTGTTATTATTGATTTTTAGAAACAACCATTCCAAAA TATTCCAAAGCCAAAGAAGAAAAGCAGCACTGTTAGTCGAGTAGGTGTGG CAAGTGAGATGGATATTCCAGATATCAAAGAGGAACCCACCAAAAGGAGC CAGAAAATACAGCTAACAACTGAGGAATGTATTCCTCTAGATGACAAAGC AGAATATGACATTCCTCTTCCAGAACCTGGTAAAGCTGATGAAGATGAAA ATAAAGCTGATGAAGATGAAAGTGAAGCTGATGAAGATGAAAGTTATAGA AATTGACAGTGAAGACGAAGAAGAAAATGATGATGAAACCGTTTCAGTTC CAGCTGTGATTGCTAAGAAATGTATCAAAATCTTTCCAAAGATTGTCCCA AAGTTGGAGATTGAACTGAGGACACCTATAATCACAAATGGATCAGTTTC ATTAAGTTACATAGATTTACTAGCCTTGGAACCAACAATGTCAAATGCTG ATAAAGATGAAATAAGAATAGAAGAACCAAAGTTCCAGGTTGGTTGGTTA TCAGATAATGTTATTGATGCCTTTCTGGAGACTGTTGTATTACACCACAA GAATTGTTTGACAGTGTCAGCTTCCATAGCTAAGAGCATCAGTCTTGGAA GAGCAAGAGCTTTCAGACGCATGTGGATGGGAAAATCAATGGATGATGTT GAAACAGTTTTGGTACCATTCAATGCTAGTGGTTCCCATTGGATTTTGAT AATTTTGAAAGTAAAGGAGCAAGAAATAATTGTTTTGGATCCAATGACAA AAAGGTATTTGTAATTATAGTGGAATCTTCAACAAGAGACTTGGCCCCTT TATTCTTCATGGGAGCTCTAGGCAAAATTATTTATCTTTATCTCCTGCAC AGATTCCATCTTGAATCTTTTTTGGTCCATTGAGAGATTGGGATTTAAAG AGATTACACTTGAAACTAGATTTTTAGTATCTATACAATTTAAGAAATAA CAAGTAAAAATCTCATTTCCTTAAAATACAAAACTCATAAAAACTTAATT TCAGCCTATCTTTGGACACTGCTGAGAAAAGTATGGAAATTGGGAAGAAG ATCTTTGAGATGAAAATCCCAGTGAATCTTCAAAACAAAGAACTGAGAAT CAATTTAAACATGCCTCACACCCTTCAAACTGACACACACAACTGTGGTG TTTTCATATGCTACTATGGGAAATGTATTGTACAAGGTAATAAATTCACA GAGCATGTTTTAAAATCCTGAAAGGTGGATAATTTATATAAGATTTTGTT TCCCTAATTTGGTTCGAAATTTTTGTGACTAGTTTCTGCCTTTTTAAATC TTTAATCAAGCAAGTATAGTGTCCATGTCTGTACAGTTTCAAAATTAAGA TGTTTCTAGATAGTTCTAGAAGAGTACAAATTTATGTACAGTAGGATAAA AATATCAAAATATTTTTTTCTAGATGAATCAATTAATGATGCATTTGGAG TTGATGTGTTTAGGCAATCCATGGTTAAAGACTTAACTGGAAATTGTTTA TTTAGCTATGACCCTTCAGTTGGAAAAAGATTATGCAAGGTATCATAATA TATATTCTATTTTAAATTAAGGAAAATAATGAAAAGAACTGAAAAGATAG ATAAATTTCCATGGCTTGAGGAAAATCATTTGTAAAAGGTTATTCTTCAT TATTCCAGGTGTGTAAGAAAACTGATGATGCTGGTGATGAAAGCAGTAGA GTCCGGTGGGTACAATGTGGAAGATGTTTTCAATGGACACATAACATGTG CTCCTTAAAGGAAATTCTCACCGAAAGAGATGAAGAAGAATTTGTTTGTT GAGAATCATTTTTTATACTTAAGTCCAAACGATAAAAATGATTATCGGTT GCAATCGATAGAAAATGGATTGATTACATATTGATAACGACAGATACTGT ATATAACAATGGATAATCGATACCTACTCACAATTTTTACAGGTTTGCTA ATTATTGATTACTTATCGATTAAATTTATACCATAGACTACTATCAATTT GATTGATTATAAAATGGGTATTAATTAATTTATTAATTAAATTAATCAAT CTACAATTTTTTAAACCTTAAAAATGATCTATTAAATACCAGACGGAACT ATTGGAACTAAAATTGGAACTATCTTCGATGTCTCCCTTCCGTTTCTCAT TTGCTCCCCATACTAGTATGAAAGATATATCAATTTCCATTTATTATTTC ATTTATCATTTATTATTGGGCTATTCCAGAAAATTTTTGTTACCCCCCGT CGGAGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038466XLOC_038466Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061313-exon-scaffold_355-1575043694:398929..400178TCONS_00061313-exon-scaffold_355-1575043694:398929..400178Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:397515..397664TCONS_00061313-exon-scaffold_355-1575043694:397515..397664Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:396749..396895TCONS_00061313-exon-scaffold_355-1575043694:396749..396895Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:396416..396610TCONS_00061313-exon-scaffold_355-1575043694:396416..396610Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:396099..396212TCONS_00061313-exon-scaffold_355-1575043694:396099..396212Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:395618..395773TCONS_00061313-exon-scaffold_355-1575043694:395618..395773Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:394424..395333TCONS_00061313-exon-scaffold_355-1575043694:394424..395333Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:394053..394292TCONS_00061313-exon-scaffold_355-1575043694:394053..394292Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:393280..393487TCONS_00061313-exon-scaffold_355-1575043694:393280..393487Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:392796..393140TCONS_00061313-exon-scaffold_355-1575043694:392796..393140Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:391775..392545TCONS_00061313-exon-scaffold_355-1575043694:391775..392545Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:391343..391524TCONS_00061313-exon-scaffold_355-1575043694:391343..391524Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:390990..391105TCONS_00061313-exon-scaffold_355-1575043694:390990..391105Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1575043694:390271..390870TCONS_00061313-exon-scaffold_355-1575043694:390271..390870Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:398929..400178TCONS_00061313-exon-scaffold_355-1510915933:398929..400178Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:397515..397664TCONS_00061313-exon-scaffold_355-1510915933:397515..397664Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:396749..396895TCONS_00061313-exon-scaffold_355-1510915933:396749..396895Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:396416..396610TCONS_00061313-exon-scaffold_355-1510915933:396416..396610Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:396099..396212TCONS_00061313-exon-scaffold_355-1510915933:396099..396212Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:395618..395773TCONS_00061313-exon-scaffold_355-1510915933:395618..395773Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:394424..395333TCONS_00061313-exon-scaffold_355-1510915933:394424..395333Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:394053..394292TCONS_00061313-exon-scaffold_355-1510915933:394053..394292Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:393280..393487TCONS_00061313-exon-scaffold_355-1510915933:393280..393487Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:392796..393140TCONS_00061313-exon-scaffold_355-1510915933:392796..393140Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:391775..392545TCONS_00061313-exon-scaffold_355-1510915933:391775..392545Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:391343..391524TCONS_00061313-exon-scaffold_355-1510915933:391343..391524Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:390990..391105TCONS_00061313-exon-scaffold_355-1510915933:390990..391105Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1510915933:390271..390870TCONS_00061313-exon-scaffold_355-1510915933:390271..390870Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:398929..400178TCONS_00061313-exon-scaffold_355-1491911889:398929..400178Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:397515..397664TCONS_00061313-exon-scaffold_355-1491911889:397515..397664Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:396749..396895TCONS_00061313-exon-scaffold_355-1491911889:396749..396895Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:396416..396610TCONS_00061313-exon-scaffold_355-1491911889:396416..396610Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:396099..396212TCONS_00061313-exon-scaffold_355-1491911889:396099..396212Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:395618..395773TCONS_00061313-exon-scaffold_355-1491911889:395618..395773Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:394424..395333TCONS_00061313-exon-scaffold_355-1491911889:394424..395333Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:394053..394292TCONS_00061313-exon-scaffold_355-1491911889:394053..394292Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:393280..393487TCONS_00061313-exon-scaffold_355-1491911889:393280..393487Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:392796..393140TCONS_00061313-exon-scaffold_355-1491911889:392796..393140Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:391775..392545TCONS_00061313-exon-scaffold_355-1491911889:391775..392545Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:391343..391524TCONS_00061313-exon-scaffold_355-1491911889:391343..391524Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:390990..391105TCONS_00061313-exon-scaffold_355-1491911889:390990..391105Clytia hemisphaericaexon
TCONS_00061313-exon-scaffold_355-1491911889:390271..390870TCONS_00061313-exon-scaffold_355-1491911889:390271..390870Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:390271..400178 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.84542 1.78161 1.38626 2.68138 1.65648 1.32496 1.52261 0.580129 0.0742695 0 0 0.109268 0 0 0 0.152929 2.145e-06 3.08667e-09 0 0 0 0.184977 0.016421 0.331408 2.96864e-05 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061313 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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